BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048453
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2 OS=Arabidopsis thaliana GN=IPT2
PE=1 SV=2
Length = 466
Score = 278 bits (710), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 164/213 (76%), Gaps = 23/213 (10%)
Query: 19 IMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLGTVS 78
IMGPTGSGKSKLAVDLASHFP+EIINAD+MQ+Y GLDVLTNKV++ +QKGVPHHLLGTVS
Sbjct: 25 IMGPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGVPHHLLGTVS 84
Query: 79 PNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFG 138
++EFTA++FRD VPLI EI+SR+HIP +VGGT+YYIQA+VS FLLDD+AED +E C
Sbjct: 85 SDMEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAAEDTEECCAD 144
Query: 139 SLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPVAANR 198
S + Q + V+ +F RD S+ Y+LLK+LDPVAANR
Sbjct: 145 VASVVDQ----------DMVVESVF-------------GRDDLSHGYELLKELDPVAANR 181
Query: 199 IHPNNYRKINQYLSLYARTGVLPSKLYQGKAAE 231
IHPNN+RKINQYLSL+A GVLPSKLYQGK AE
Sbjct: 182 IHPNNHRKINQYLSLHASRGVLPSKLYQGKTAE 214
>sp|Q9UT75|MOD5_SCHPO tRNA dimethylallyltransferase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tit1 PE=3 SV=1
Length = 434
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 28/210 (13%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
L +++G TG+GKS LAV LA F ++INADSMQ+Y+G D +TNK+++++Q+ V H L+
Sbjct: 5 LCVVIGTTGAGKSDLAVQLAKRFGSQVINADSMQIYRGFDTITNKITVEEQENVHHRLMS 64
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDES 135
++ + E++ EF A +I EI S+ IP +VGGT+YY+Q+L L +D+
Sbjct: 65 FLNFDKEYSVPEFERDASRVIDEIHSQGKIPIVVGGTHYYLQSL----LFEDT------- 113
Query: 136 CFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPVA 195
+LS I +L T ++ + +P PDS + D S LK +DPV
Sbjct: 114 ---TLSAIDKL-------TNDS-------SPSKPPHPDSHILDDDPSAMLSYLKKIDPVM 156
Query: 196 ANRIHPNNYRKINQYLSLYARTGVLPSKLY 225
A + HP + RKI + L +Y TG PS++Y
Sbjct: 157 AEQWHPRDTRKIRRSLEIYFHTGRPPSEIY 186
>sp|Q94ID3|IPT1_ARATH Adenylate isopentenyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=IPT1 PE=1 SV=2
Length = 357
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
Query: 1 MENGGSKQRALNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNK 60
ME S+ R K +V+I+G TG+GKS+L+VDLA+ FP EIIN+D +QVY+GL++ TN+
Sbjct: 55 MEQSRSRNR---KDKVVVILGATGAGKSRLSVDLATRFPSEIINSDKIQVYEGLEITTNQ 111
Query: 61 VSLQDQKGVPHHLLGTVSP-NVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQAL 119
++LQD++GVPHHLLG ++P + E TA EFR +A ++ EI SR +P I GG+N ++ AL
Sbjct: 112 ITLQDRRGVPHHLLGVINPEHGELTAGEFRSAASNVVKEITSRQKVPIIAGGSNSFVHAL 171
Query: 120 VS 121
++
Sbjct: 172 LA 173
>sp|Q80UN9|MOD5_MOUSE tRNA dimethylallyltransferase, mitochondrial OS=Mus musculus
GN=Trit1 PE=2 SV=2
Length = 467
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 33/216 (15%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
LV+I+G TG+GKS LA+ L EI++ADSMQVY+GLD++TNKVS Q+QK HH++
Sbjct: 25 LVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVYEGLDIITNKVSAQEQKMCQHHMIS 84
Query: 76 TVSPNV-EFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
V P V +T +FR+ A LI +I +RD IP +VGGTNYYI++L+ L+ ++M
Sbjct: 85 FVDPLVTSYTVVDFRNKATALIEDIFARDKIPIVVGGTNYYIESLLWKVLITTKPQEM-- 142
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
+ V +L ++ + L +DP
Sbjct: 143 ------------------------------GTGKVVDRKVELEKEDGHELHKRLSQVDPE 172
Query: 195 AANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKAA 230
A ++HP++ RK+ + L ++ TG+ S+ + A
Sbjct: 173 MAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHA 208
>sp|Q9H3H1|MOD5_HUMAN tRNA dimethylallyltransferase, mitochondrial OS=Homo sapiens
GN=TRIT1 PE=1 SV=1
Length = 467
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 118/217 (54%), Gaps = 34/217 (15%)
Query: 5 GSKQRALNKP-NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSL 63
GS R L + LV+I+G TG+GKS LA+ L EI++ADSMQVY+GLD++TNKVS
Sbjct: 13 GSGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVYEGLDIITNKVSA 72
Query: 64 QDQKGVPHHLLGTVSPNV-EFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSP 122
Q+Q+ HH++ V P V +T +FR+ A LI +I +RD IP +VGGTNYYI++L+
Sbjct: 73 QEQRICRHHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVGGTNYYIESLLWK 132
Query: 123 FLLDDSAEDMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSS 182
L++ ++M ++ + +L ++
Sbjct: 133 VLVNTKPQEM--------------------------------GTEKVIDRKVELEKEDGL 160
Query: 183 YSYDLLKDLDPVAANRIHPNNYRKINQYLSLYARTGV 219
+ L +DP A ++HP++ RK+ + L ++ TG+
Sbjct: 161 VLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGI 197
>sp|B8E281|MIAA_DICTD tRNA dimethylallyltransferase OS=Dictyoglomus turgidum (strain
Z-1310 / DSM 6724) GN=miaA PE=3 SV=1
Length = 326
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 36/204 (17%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
L +I+GPTG+GK+KL+++LA + P+EI++ DSMQ+YQG+D+ T K SL+D++ VPHHL+
Sbjct: 5 LAVILGPTGTGKTKLSLELAKYLPVEIVSVDSMQIYQGMDIGTAKPSLEDREKVPHHLID 64
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDES 135
V P+ FT EFR+ A+ +I EI +R P +VGGT Y + L F + D++
Sbjct: 65 IVLPDYFFTVAEFRERALKVIEEIYARRRFPLLVGGTPLYYKVLFGEFSIPHVPPDLE-- 122
Query: 136 CFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYS-YDLLKDLDPV 194
+R +LA Y Y+ LK +DP
Sbjct: 123 ------------------------FRRKM---------KELAEKEGEYKLYEELKKIDPK 149
Query: 195 AANRIHPNNYRKINQYLSLYARTG 218
A++IHP + ++I + L +Y + G
Sbjct: 150 TASKIHPRDLKRIIRALEVYYKVG 173
>sp|Q5GHF7|IPT_HUMLU Adenylate isopentenyltransferase OS=Humulus lupulus PE=1 SV=1
Length = 329
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
Query: 7 KQRALNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQ 66
+++ K L+++MG TG+GKS+L++DLA+HFP+E+IN+D MQVY+GLD+ TNK+S+ D+
Sbjct: 23 RRQRHRKEKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDR 82
Query: 67 KGVPHHLLGTVSP-NVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALV 120
GVPHHLLG V P E T +FR A +SEI R +P +VGG+N +I AL+
Sbjct: 83 GGVPHHLLGEVDPARGELTPADFRSLAGKAVSEITGRRKLPVLVGGSNSFIHALL 137
>sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis
thaliana GN=IPT5 PE=1 SV=2
Length = 330
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
K +V +MG TG+GKS+LA+DLA+ FP EI+N+D +QVY+GLD++TNKV+ ++ GVPH
Sbjct: 31 RKDKVVFVMGATGTGKSRLAIDLATRFPAEIVNSDKIQVYKGLDIVTNKVTPEESLGVPH 90
Query: 72 HLLGTVSPNVE-FTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVS 121
HLLGTV E FTA++F+ A+ + I+ RD +P I GG+N YI+ALV+
Sbjct: 91 HLLGTVHDTYEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSYIEALVN 141
>sp|Q8R5S5|MIAA_THETN tRNA dimethylallyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=miaA PE=3 SV=1
Length = 315
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 36/205 (17%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+V+I+GPT +GKS+LAVD+A F E+++ADSMQ+Y+ +D+ T K++ ++ +G+PHH++
Sbjct: 4 QIVLIVGPTATGKSRLAVDVAKRFNGEVVSADSMQIYKYMDIGTAKITKEEMQGIPHHMI 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
V PN EF+ E+ A +I +I R +P IVGGT YI ++V D
Sbjct: 64 DIVEPNEEFSVAEYEKRAKAIIKDIHERGKLPIIVGGTGLYINSIVYIMHFSD------- 116
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARD-SSSYSYDLLKDLDP 193
F E LA +SY Y+ LK++DP
Sbjct: 117 ----------------------------FEGSKEFREKMKKLAETYGTSYLYEKLKEVDP 148
Query: 194 VAANRIHPNNYRKINQYLSLYARTG 218
AA +IHPN+ R+I + L +Y TG
Sbjct: 149 EAARKIHPNDLRRIIRALEVYEFTG 173
>sp|B0K1A4|MIAA_THEPX tRNA dimethylallyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=miaA PE=3 SV=1
Length = 315
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 114/212 (53%), Gaps = 35/212 (16%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+V+I+GPT SGKSKLAVD+A F EII+ADSMQVY+ +DV T K++ ++ +G+PH+L+
Sbjct: 4 QIVLIVGPTASGKSKLAVDVAKEFNGEIISADSMQVYKYMDVGTAKITKEEMQGIPHYLI 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
V P+ EF+ E+ A +I +I R +P IVGGT YI +++ +++
Sbjct: 64 DIVEPDQEFSVAEYEKRAKEIIKDIYKRGKLPIIVGGTGLYINSII--YIMH-------- 113
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
F G K+ F NT S Y Y+ LK +DP
Sbjct: 114 --FSDFEGSKE-FREKMKELANTY---------------------GSQYLYEKLKSVDPE 149
Query: 195 AANRIHPNNYRKINQYLSLYARTGVLPSKLYQ 226
AA +IHPN+ R+I + L +Y TG P YQ
Sbjct: 150 AAKKIHPNDIRRIIRALEVYEFTG-KPISYYQ 180
>sp|B0K9L7|MIAA_THEP3 tRNA dimethylallyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=miaA PE=3
SV=1
Length = 315
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 114/212 (53%), Gaps = 35/212 (16%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+V+I+GPT SGKSKLAVD+A F EII+ADSMQVY+ +DV T K++ ++ +G+PH+L+
Sbjct: 4 QIVLIVGPTASGKSKLAVDVAKEFNGEIISADSMQVYKYMDVGTAKITKEEMQGIPHYLI 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
V P+ EF+ E+ A +I +I R +P IVGGT YI +++ +++
Sbjct: 64 DIVEPDQEFSVAEYEKRAKEIIKDIYKRGKLPIIVGGTGLYINSII--YIMH-------- 113
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
F G K+ F NT S Y Y+ LK +DP
Sbjct: 114 --FSDFEGSKE-FREKMKELANTY---------------------GSQYLYEKLKSVDPE 149
Query: 195 AANRIHPNNYRKINQYLSLYARTGVLPSKLYQ 226
AA +IHPN+ R+I + L +Y TG P YQ
Sbjct: 150 AAKKIHPNDIRRIIRALEVYEFTG-KPISYYQ 180
>sp|B7GIA2|MIAA_ANOFW tRNA dimethylallyltransferase OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=miaA PE=3 SV=1
Length = 311
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 38/204 (18%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+V+++GPT GK+K+++ LA EIIN DSMQVY+GLD+ T K+ ++ +G+PHHLL
Sbjct: 4 KVVVLIGPTAVGKTKMSIQLAKRLNGEIINGDSMQVYKGLDIGTAKIRQEETEGIPHHLL 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
P+ F+ EF+ A LI +I R +P IVGGT YIQ+++ + D+
Sbjct: 64 DIKEPHESFSVAEFQTLARSLIKDITKRGKLPIIVGGTGLYIQSVIYDYQFSDAP----- 118
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
+ LYR L R S Y+ LK +DP+
Sbjct: 119 ---------------------SNDLYR------------QSLERCSPDELYEQLKQIDPL 145
Query: 195 AANRIHPNNYRKINQYLSLYARTG 218
+A RIHPNN R++ + L +Y TG
Sbjct: 146 SAERIHPNNVRRVIRALEIYHCTG 169
>sp|B1HRH3|MIAA_LYSSC tRNA dimethylallyltransferase OS=Lysinibacillus sphaericus (strain
C3-41) GN=miaA PE=3 SV=1
Length = 300
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 34/209 (16%)
Query: 11 LNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVP 70
L + +V I+GPT SGK+ L+++LA + EIIN DSMQVY+GLD+ T K++ ++ +GVP
Sbjct: 6 LQQAEVVAIVGPTASGKTALSIELAKKYNGEIINGDSMQVYKGLDIGTAKITEEEMEGVP 65
Query: 71 HHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAE 130
HHLL + P F+ +++ I++I +R +P IVGG+ Y+QA++ F D E
Sbjct: 66 HHLLSFLEPTASFSVADYQKLVREKIADIQARHKLPIIVGGSGLYVQAVLFDFQFTD--E 123
Query: 131 DMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKD 190
+DE+ +Q +Y +LA+ +D LK
Sbjct: 124 KVDEAA-------RQAYY-------------------------DELAKLGPEAMHDKLKQ 151
Query: 191 LDPVAANRIHPNNYRKINQYLSLYARTGV 219
LDP A IHPNN R++ + L + +GV
Sbjct: 152 LDPQTAEAIHPNNTRRVIRALEMLELSGV 180
>sp|B9DPA1|MIAA_STACT tRNA dimethylallyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=miaA PE=3 SV=1
Length = 316
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 37/222 (16%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP LV+I+GPT GK++L+++LA EII+ DS+QVY+G+D+ T KV+ ++ +GVPH
Sbjct: 4 NKPLLVVIVGPTAVGKTELSIELAKKIGGEIISGDSIQVYRGMDIGTAKVTKEEMQGVPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALV--SPFLLDDSA 129
+L+ + P+ F+A F++ A LI+EI R HIP I GGT YIQ+L+ PF ++ +
Sbjct: 64 YLIDILDPDEPFSAFAFKERAQKLITEITERGHIPIIAGGTGLYIQSLIYDYPFDKEEIS 123
Query: 130 EDMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLK 189
+ ++ ++ ++ L S+ +D LK
Sbjct: 124 PEKEQEVKEKMAQLESL---------------------------------SNEALHDYLK 150
Query: 190 DLDPVAANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKAAE 231
DP +A IHPNN +++ + + Y +T L S Y+ K +
Sbjct: 151 SFDPDSAEDIHPNNRKRVLRAVEYYLKTKKLLS--YRKKTVQ 190
>sp|B5YE43|MIAA_DICT6 tRNA dimethylallyltransferase OS=Dictyoglomus thermophilum (strain
ATCC 35947 / DSM 3960 / H-6-12) GN=miaA PE=3 SV=1
Length = 326
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 36/204 (17%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
L +I+GPTG+GK+ L+++LA + P+EI++ DSMQVYQG+D+ T K SL+D+K PHHL+
Sbjct: 5 LAVILGPTGTGKTDLSLELAKYLPVEIVSVDSMQVYQGMDIGTAKPSLEDRKRAPHHLID 64
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDES 135
V P+ FT EF++ A+ I EI R H P +VGGT Y + L F + D++
Sbjct: 65 IVPPDYFFTVAEFKERALKAIDEIYERGHYPLLVGGTPLYYKVLFGEFSIPHVPPDLEFR 124
Query: 136 CFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYS-YDLLKDLDPV 194
K++ ++A Y Y+ LK +DP
Sbjct: 125 --------KKM---------------------------REIAEREGEYKLYEELKKVDPK 149
Query: 195 AANRIHPNNYRKINQYLSLYARTG 218
A+++HP + ++I + L +Y + G
Sbjct: 150 TASKVHPRDLKRIIRALEVYHKVG 173
>sp|Q9KAC3|MIAA_BACHD tRNA dimethylallyltransferase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=miaA PE=1 SV=1
Length = 314
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 42/210 (20%)
Query: 13 KPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHH 72
K LV I+GPT GK+K +V LA E+I+ DSMQVY+G+D+ T K++ ++ GVPHH
Sbjct: 2 KEKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHH 61
Query: 73 LLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDM 132
L+ P+ F+ +F+D A PLI+EI R +PF+VGGT Y+ A++ F L D D
Sbjct: 62 LIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADE 121
Query: 133 DE----SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLL 188
D F + G++ L +D L
Sbjct: 122 DYRHELEAFVNSYGVQAL--------------------------------------HDKL 143
Query: 189 KDLDPVAANRIHPNNYRKINQYLSLYARTG 218
+DP AA IHPNNYR++ + L + TG
Sbjct: 144 SKIDPKAAAAIHPNNYRRVIRALEIIKLTG 173
>sp|A5GEV6|MIAA2_GEOUR tRNA dimethylallyltransferase 2 OS=Geobacter uraniireducens (strain
Rf4) GN=miaA2 PE=3 SV=1
Length = 310
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 111/207 (53%), Gaps = 35/207 (16%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
+K L+II+GPT SGK++LAV LA F EI+NADSMQVY+G+D+ T K S Q ++ VPH
Sbjct: 6 DKIKLIIIVGPTASGKTELAVRLAERFDGEIVNADSMQVYRGMDIGTAKPSPQLRQRVPH 65
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ V+P+V F+A +FR A I +I SR F+VGGT YI+AL+ + S
Sbjct: 66 HLVDIVTPDVNFSAADFRREAAAAIDDIHSRGKSVFVVGGTGLYIRALLQGLVDSPSG-- 123
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
DES L + Q VG + L R L +
Sbjct: 124 -DESIRRELVELAQ-----------------------TVGNEELLRR---------LALV 150
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTG 218
DP A R+HPN+ +I + L +Y +TG
Sbjct: 151 DPETAERLHPNDRLRIIRALEVYRQTG 177
>sp|Q9SB60|IPT4_ARATH Adenylate isopentenyltransferase 4 OS=Arabidopsis thaliana GN=IPT4
PE=1 SV=1
Length = 318
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+V+IMG TGSGKS L+VDLA HF EIIN+D MQ Y GL + TN+ +++D++GVPHHLL
Sbjct: 6 KMVVIMGATGSGKSSLSVDLALHFKAEIINSDKMQFYDGLKITTNQSTIEDRRGVPHHLL 65
Query: 75 GTVSPNV-EFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVS 121
G ++P E TA EFR A ISEI R +P + GG+N YI AL++
Sbjct: 66 GELNPEAGEVTAAEFRVMAAEAISEITQRKKLPILAGGSNSYIHALLA 113
>sp|Q65JA9|MIAA_BACLD tRNA dimethylallyltransferase OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=miaA PE=3 SV=1
Length = 314
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 34/221 (15%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
KP +++++GPT GK+KL+V LA EII+ DSMQ+Y+ +D+ T K+ ++ GVPH
Sbjct: 4 TKPPVIVLIGPTAVGKTKLSVMLAERLNAEIISGDSMQIYKRMDIGTAKIREEEMNGVPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ P F+ E+++ I+EI R +P IVGGT YIQ+++ + + A D
Sbjct: 64 HLIDIKEPTESFSVAEYQEIVRQKIAEIDRRGKLPMIVGGTGLYIQSVLYDYSFTEEAGD 123
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
+ F A E A+ + Y +DLLK+
Sbjct: 124 PE-----------------------------FRAEMEAFS-----AKRGAEYVHDLLKER 149
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKAAEV 232
DP AA IHPNN R++ + L + TG S+ +G+ E+
Sbjct: 150 DPEAARAIHPNNKRRVIRALEILHTTGKTMSEHMEGQRKEL 190
>sp|Q49X96|MIAA_STAS1 tRNA dimethylallyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=miaA PE=3 SV=1
Length = 315
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 35/213 (16%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
+KP +V+++GPT GK++ +++LA + EII+ DSMQVY+ +D+ T K++L + G+PH
Sbjct: 4 DKPFIVVLVGPTAVGKTEFSIELAKKYNGEIISGDSMQVYKNMDIGTAKITLDEMSGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDS--A 129
++ + P+ F+A EF++ A LI EI R +P IVGGT YIQ+L+ + +D +
Sbjct: 64 QMIDILEPDEPFSAYEFKNRAQKLIKEITHRGRVPIIVGGTGLYIQSLIYDYAFEDETIS 123
Query: 130 EDMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLK 189
E ES L+ + QL S+ + L
Sbjct: 124 EAHSESVETQLAELDQL---------------------------------SNDELHQYLA 150
Query: 190 DLDPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D ++A IHPNN +++ + + Y +T L S
Sbjct: 151 SFDEISAQDIHPNNRKRVRRAIQYYLKTKKLLS 183
>sp|P65356|MIAA_STAAW tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain MW2)
GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|A8Z1X3|MIAA_STAAT tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|P65355|MIAA_STAAN tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
N315) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|P65354|MIAA_STAAM tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=miaA PE=1 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|A6QGK1|MIAA_STAAE tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
Newman) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|Q5HGC9|MIAA_STAAC tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain COL)
GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|A5ISI5|MIAA_STAA9 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain JH9)
GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|Q2FYZ2|MIAA_STAA8 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain NCTC
8325) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|Q2FHD6|MIAA_STAA3 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
USA300) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|A6U1C1|MIAA_STAA2 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain JH1)
GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|A7X1U8|MIAA_STAA1 tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain Mu3
/ ATCC 700698) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN +++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRVLRAIEYYLKTKKLLS 183
>sp|B9M3M9|MIAA2_GEOSF tRNA dimethylallyltransferase 2 OS=Geobacter sp. (strain FRC-32)
GN=miaA2 PE=3 SV=1
Length = 326
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 35/215 (16%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
K LV I+GPT SGK++LAV LA F EI+NADSMQVY+G+D+ T K S+ + V H
Sbjct: 5 EKIKLVSIVGPTASGKTELAVRLAERFDGEIVNADSMQVYRGMDIGTAKPSVSLRSRVTH 64
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ V+P+V F+A +FR +A I++I SR FIVGGT YI+AL+ + S
Sbjct: 65 HLIDIVTPDVNFSASDFRRAADGAIADIHSRGKRVFIVGGTGLYIRALLQGLVDSPSG-- 122
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
DE G L+ + + +G + L LL ++
Sbjct: 123 -DEQIRGELNELAK-----------------------EIGNEGLL---------QLLAEV 149
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPSKLYQ 226
DP+ A R+H N+ +I + L +Y +TG S+ Q
Sbjct: 150 DPITAERLHHNDRVRIIRALEVYRQTGRPMSQFRQ 184
>sp|Q6GHD2|MIAA_STAAR tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=miaA PE=3 SV=1
Length = 311
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 113/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+G ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIGILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + ++ L
Sbjct: 122 ---VTPAQLSVVKQKL--------------------------SALEHLDNQQLHEYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D +A IHPNN +++ + + Y +T L S
Sbjct: 153 DEASAKNIHPNNRQRVLRAIEYYFKTKKLLS 183
>sp|P07884|MOD5_YEAST tRNA dimethylallyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOD5 PE=1
SV=2
Length = 428
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 35/219 (15%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
+++I G TG GKS+L++ LA F E+IN+DSMQVY+ + ++TNK LQ+++G+PHH++
Sbjct: 16 VIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMN 75
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDES 135
V + E+ + F + I +I R IP +VGGT+YY+Q L + + S+E
Sbjct: 76 HVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERK--- 132
Query: 136 CFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPVA 195
L R E PD Y+ L DP
Sbjct: 133 -----------------------LTRKQLDILESTDPD---------VIYNTLVKCDPDI 160
Query: 196 ANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKAAEVGF 234
A + HPN+YR++ + L +Y +TG PS+ + + + F
Sbjct: 161 ATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKITLKF 199
>sp|Q2YXR3|MIAA_STAAB tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=miaA PE=3 SV=2
Length = 311
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTSAQLSVVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D +A IHPNN +++ + + Y +T L S
Sbjct: 153 DEASAKNIHPNNRQRVLRAIEYYFKTKKLLS 183
>sp|Q8CQL3|MIAA_STAES tRNA dimethylallyltransferase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=miaA PE=1 SV=1
Length = 332
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 31/212 (14%)
Query: 11 LNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVP 70
+ KP L++I+GPT SGK++L++++A F EII+ DSMQVYQG+D+ T KV+ ++ +G+P
Sbjct: 4 MTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIP 63
Query: 71 HHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAE 130
H+++ + P+ F+A EF+ A I +I R +P I GGT YIQ+L+ + +D +
Sbjct: 64 HYMIDILPPDASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESI 123
Query: 131 DMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKD 190
D+ + V +L +L +++ ++ L
Sbjct: 124 SEDK--------------------MKQVKLKL-----------KELEHLNNNKLHEYLAS 152
Query: 191 LDPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D +A IHPNN +++ + + Y +T L S
Sbjct: 153 FDKESAKDIHPNNRKRVLRAIEYYLKTKKLLS 184
>sp|Q5HPN8|MIAA_STAEQ tRNA dimethylallyltransferase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=miaA PE=3 SV=1
Length = 332
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 31/212 (14%)
Query: 11 LNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVP 70
+ KP L++I+GPT SGK++L++++A F EII+ DSMQVYQG+D+ T KV+ ++ +G+P
Sbjct: 4 MTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIP 63
Query: 71 HHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAE 130
H+++ + P+ F+A EF+ A I +I R +P I GGT YIQ+L+ + +D +
Sbjct: 64 HYMIDILPPDASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESI 123
Query: 131 DMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKD 190
D+ + V +L +L +++ ++ L
Sbjct: 124 SEDK--------------------MKQVKLKL-----------KELEHLNNNKLHEYLAS 152
Query: 191 LDPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D +A IHPNN +++ + + Y +T L S
Sbjct: 153 FDKESAKDIHPNNRKRVLRAIEYYLKTKKLLS 184
>sp|Q74BP1|MIAA_GEOSL tRNA dimethylallyltransferase OS=Geobacter sulfurreducens (strain
ATCC 51573 / DSM 12127 / PCA) GN=miaA PE=3 SV=1
Length = 311
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 108/210 (51%), Gaps = 35/210 (16%)
Query: 9 RALNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKG 68
+A +K LVII GPT SGKS+LAV LA +++NADSMQVY+G+D+ T K S +
Sbjct: 4 QAGSKTKLVIIQGPTASGKSELAVRLAEACGGDVVNADSMQVYRGMDIGTAKPSPELVAR 63
Query: 69 VPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDS 128
VPHHL V P+V FTA ++R A +I+EI SR P +VGGT YI+ L+
Sbjct: 64 VPHHLYDIVDPDVNFTAADYRREAGRVITEIHSRGKRPILVGGTGLYIKTLIGGLAPSPG 123
Query: 129 AEDMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLL 188
A+D T+ L + D + ++ +D L
Sbjct: 124 ADD----------------------TIRAEL-------------EEDARSEGAAALHDRL 148
Query: 189 KDLDPVAANRIHPNNYRKINQYLSLYARTG 218
+DP AA R+HPN+ +I + L ++ TG
Sbjct: 149 AQVDPAAAARLHPNDRVRIVRALEVFLMTG 178
>sp|A4IMI5|MIAA_GEOTN tRNA dimethylallyltransferase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=miaA PE=3 SV=1
Length = 315
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 110/218 (50%), Gaps = 34/218 (15%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+V+I+GPT GK+KL + LA EII+ DSMQ+Y+G+D+ T KV + +GVPHHLL
Sbjct: 4 KIVVIVGPTEVGKTKLGIALAKKLGGEIISGDSMQIYKGMDIGTAKVKPDEMEGVPHHLL 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
P F+ EF+ A LI++I +R +P IVGGT YIQA + + D+ D
Sbjct: 64 DIKEPCEPFSVVEFQRLARALITDISARGRLPIIVGGTGLYIQAAIYDYRFSDAPSDE-- 121
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
++QL A + ++ LK +DP
Sbjct: 122 ---AYRRALRQL-----------------------------AAEQGAEALHEQLKAVDPE 149
Query: 195 AANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKAAEV 232
+A RIHPNN R++ + L +Y TG S+ +G+ ++
Sbjct: 150 SAARIHPNNVRRVIRALEVYHCTGKPFSEWQRGQQRQL 187
>sp|Q4L610|MIAA_STAHJ tRNA dimethylallyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=miaA PE=3 SV=1
Length = 332
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 115/212 (54%), Gaps = 31/212 (14%)
Query: 11 LNKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVP 70
+NKP LV+I+GPT SGK++L+++LA EII+ DSMQVY+ +D+ T KV+ ++ G+P
Sbjct: 4 INKPFLVVIVGPTASGKTELSIELAKQINGEIISGDSMQVYKQMDIGTAKVTNEEMDGIP 63
Query: 71 HHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAE 130
H+++ ++P+ F+ +F+ A LI +I SR IP I GGT YIQ+L+ + D
Sbjct: 64 HYMIDILNPDDSFSVYDFKLRAQALIEDITSRGKIPIIAGGTGLYIQSLIYDYPFD---- 119
Query: 131 DMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKD 190
DE+ + QL L +L EP+ ++ +D L
Sbjct: 120 --DETVSKEVEQKTQL-----------QLQKL-----EPL---------TNQEVHDYLAT 152
Query: 191 LDPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
DP +A IHPNN +++ + + Y T L S
Sbjct: 153 FDPQSAKDIHPNNRKRVLRAIEYYLNTKKLIS 184
>sp|Q93WC9|IPT3_ARATH Adenylate isopentenyltransferase 3, chloroplastic OS=Arabidopsis
thaliana GN=IPT3 PE=1 SV=1
Length = 336
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 79/108 (73%)
Query: 13 KPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHH 72
K +V+IMG TG+GKS+L+VD+A+ F EIIN+D +QV+QGLD++TNK++ ++ GVPHH
Sbjct: 40 KDKVVVIMGATGTGKSRLSVDIATRFRAEIINSDKIQVHQGLDIVTNKITSEESCGVPHH 99
Query: 73 LLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALV 120
LLG + P + TA + A I +L+R +P IVGG+N Y++ALV
Sbjct: 100 LLGVLPPEADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALV 147
>sp|Q6G9R0|MIAA_STAAS tRNA dimethylallyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=miaA PE=3 SV=1
Length = 311
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 31/211 (14%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
NKP +V+I+GPT SGK++L+++LA EII+ DSMQVY+ +++ T KV+ ++ G+PH
Sbjct: 4 NKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYKHMNIGTAKVTPEEMDGIPH 63
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED 131
HL+ ++P+ F+A EF+ A LI++I +R +P I GGT YIQ+L+ + L+D
Sbjct: 64 HLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAGGTGLYIQSLIYNYELEDET-- 121
Query: 132 MDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDL 191
LS +KQ S L + +D L
Sbjct: 122 ---VTPAQLSIVKQKL--------------------------SALEHLDNQQLHDYLAQF 152
Query: 192 DPVAANRIHPNNYRKINQYLSLYARTGVLPS 222
D V+A IHPNN ++ + + Y +T L S
Sbjct: 153 DAVSAENIHPNNRQRGLRAIEYYLKTKKLLS 183
>sp|Q3ACA8|MIAA_CARHZ tRNA dimethylallyltransferase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=miaA PE=3 SV=1
Length = 311
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 34/204 (16%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
L+II+GPT GKS L + +A EII+ DSMQVY+ +D+ T KV ++++GVPHHL+
Sbjct: 4 KLIIIVGPTAVGKSALGIKVAKKINGEIISGDSMQVYKYMDIGTAKVLPEEREGVPHHLI 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
+ P +++ F+ A LI EI R IP IVGGT YI++++ P+ D
Sbjct: 64 DILEPFQKYSVALFQKEARRLIKEINERGKIPIIVGGTGLYIRSVIDPYDFTD------- 116
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
F F + F G + SSY + +L+ +DPV
Sbjct: 117 ------------FSFDPV-----------FRGK----LEQAAKEKGSSYLHQMLEKIDPV 149
Query: 195 AANRIHPNNYRKINQYLSLYARTG 218
AA +IH N+ R+I + L +Y TG
Sbjct: 150 AAQKIHSNDLRRIIRALEVYEHTG 173
>sp|A9KL08|MIAA_CLOPH tRNA dimethylallyltransferase OS=Clostridium phytofermentans
(strain ATCC 700394 / DSM 18823 / ISDg) GN=miaA PE=3
SV=1
Length = 313
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 34/208 (16%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
LVI+ GPT GK+KL++DLA EII+ADSMQVY+ +D+ T K++ ++ +GV H+L+
Sbjct: 4 LVILTGPTAVGKTKLSIDLAKSINGEIISADSMQVYRHMDIGTAKITPEEMEGVTHYLVD 63
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDES 135
P+ EF +F+D A I EI S+ +P IVGGT +YIQA++ +D + D D
Sbjct: 64 EFEPDEEFNVVKFKDCAKEAIREIYSKGKVPIIVGGTGFYIQAVLKD--IDFTENDSDTP 121
Query: 136 CFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPVA 195
L + Q + + +D+LK DPVA
Sbjct: 122 YRKELEELAQT--------------------------------EGAIKLHDILKQCDPVA 149
Query: 196 ANRIHPNNYRKINQYLSLYARTGVLPSK 223
A IHPNN ++ + + + TG SK
Sbjct: 150 AEAIHPNNIKRTIRAIEYFKLTGEPISK 177
>sp|Q03G75|MIAA_PEDPA tRNA dimethylallyltransferase OS=Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w) GN=miaA PE=3 SV=1
Length = 310
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 84/119 (70%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
++ I+GPT GK+ L++D+A F EII+ DSMQVYQ LD+ T KV++++ +G+PHHL+
Sbjct: 4 VLAIVGPTAVGKTNLSIDIAKKFNGEIISGDSMQVYQKLDIGTAKVTIEEMQGIPHHLID 63
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
T + + F+A +F+++A LISEI R +P +VGGT +Y+QAL+ L S ED ++
Sbjct: 64 TKTIHDRFSAADFKETAQKLISEISQRGKLPIVVGGTGFYLQALLRDLELGGSNEDRNQ 122
>sp|Q67NL1|MIAA_SYMTH tRNA dimethylallyltransferase OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=miaA PE=3 SV=1
Length = 319
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 34/204 (16%)
Query: 16 LVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLLG 75
LV+++GPT GK+ L+V +A EII+ DSMQVY+G+D+ T K+ ++ GVPHHL+
Sbjct: 5 LVVLVGPTAVGKTALSVAVAQAVGAEIISGDSMQVYRGMDIGTAKIRPEEMGGVPHHLID 64
Query: 76 TVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDES 135
P+ EF+ EF+ LI +I +R +P +VGGT Y++A+V
Sbjct: 65 IKDPDEEFSVAEFQARVDALIPQICARGRLPMLVGGTGLYVRAVV--------------- 109
Query: 136 CFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPVA 195
+ + FT + + + RL + R Y + L+++DP +
Sbjct: 110 ---------EKYTFTPMEADHELRARL----------RQEEERHGPGYLHARLREVDPAS 150
Query: 196 ANRIHPNNYRKINQYLSLYARTGV 219
A R+HPN+ +I + L +Y +TGV
Sbjct: 151 AARLHPNDLLRIVRALEVYEQTGV 174
>sp|Q5L0D9|MIAA_GEOKA tRNA dimethylallyltransferase OS=Geobacillus kaustophilus (strain
HTA426) GN=miaA PE=3 SV=1
Length = 315
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 34/215 (15%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
+ +I+GPT GK+KL + LA E+I+ DSMQ+Y+G+D+ T KV + +G+PHHLL
Sbjct: 4 KVAVIVGPTAVGKTKLGIALAKKLGGEVISGDSMQIYKGMDIGTAKVKPDEMEGIPHHLL 63
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
P F+ EF+ LI+EI +R +P IVGGT YIQA + + SA DE
Sbjct: 64 DIKEPCEPFSVVEFQRLCRALITEISARGRLPIIVGGTGLYIQAALYDYQF--SAAPSDE 121
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
+ +L KQL A + + L+ +DP+
Sbjct: 122 AYRRAL---KQL-----------------------------AAEQGAEALHRRLEAVDPI 149
Query: 195 AANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKA 229
+A RIHP+N R++ + L +Y TG S+ QG++
Sbjct: 150 SAARIHPHNIRRVIRALEVYHCTGKPFSEWQQGQS 184
>sp|A3DDI1|MIAA_CLOTH tRNA dimethylallyltransferase OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=miaA PE=3 SV=1
Length = 313
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 34/203 (16%)
Query: 15 NLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHLL 74
N+++I+GPT SGK+KLA+++A EII+ADSMQ+Y+ +D+ T K ++++G+ H+L+
Sbjct: 3 NVLVIIGPTASGKTKLAIEIAKRANGEIISADSMQIYKYMDIGTAKPDEEEKEGIKHYLI 62
Query: 75 GTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE 134
V+P+ EF+ F++ A+ I EILS+ +P + GGT YI +L+ D+
Sbjct: 63 DEVTPDEEFSVARFKELALKYIDEILSKGKLPIVAGGTGLYINSLIYNLEFSDT------ 116
Query: 135 SCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDPV 194
C L L + + + Y ++ LK++DP
Sbjct: 117 ---------------ICDWELRKKL-------------EQEAKEKGNEYLHNKLKEIDPK 148
Query: 195 AANRIHPNNYRKINQYLSLYART 217
AA +IH NN +++ + + +Y T
Sbjct: 149 AAEKIHMNNVKRVIRAIEVYTYT 171
>sp|Q39TZ3|MIAA_GEOMG tRNA dimethylallyltransferase OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=miaA PE=3 SV=1
Length = 309
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 45/212 (21%)
Query: 12 NKPNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPH 71
K LVI+ GPT SGKS LA++LA EI+NADSMQVY+G+D+ T K S ++++ VPH
Sbjct: 5 EKTRLVIVQGPTASGKSALALELAERIGGEIVNADSMQVYRGMDIGTAKPSQEERRRVPH 64
Query: 72 HLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALV-----SPFLLD 126
HL V P V FTA +FR+ A I++I R +VGGT YI+ L SP D
Sbjct: 65 HLYDIVDPKVNFTAADFREHASRAIADIERRGKRVILVGGTGLYIRILTQGLVASPGGDD 124
Query: 127 DSAEDMDESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYD 186
+ ++++ G G++ L +
Sbjct: 125 NIRRELEDQAHG--EGLESL--------------------------------------HR 144
Query: 187 LLKDLDPVAANRIHPNNYRKINQYLSLYARTG 218
L +DPVAA R+HPN+ +I + L ++ TG
Sbjct: 145 RLAAVDPVAAARLHPNDGVRIVRALEVFLLTG 176
>sp|A1AT90|MIAA1_PELPD tRNA dimethylallyltransferase 1 OS=Pelobacter propionicus (strain
DSM 2379) GN=miaA1 PE=3 SV=1
Length = 309
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 110/221 (49%), Gaps = 39/221 (17%)
Query: 14 PNLVIIMGPTGSGKSKLAVDLASHFPIEIINADSMQVYQGLDVLTNKVSLQDQKGVPHHL 73
P ++II GPT SGKS+LAV LA EI+NADSMQ+++G+D+ T K ++ + VPHHL
Sbjct: 7 PRILIICGPTASGKSELAVRLARELDGEIVNADSMQIHRGMDIGTAKPTVGEMGAVPHHL 66
Query: 74 LGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMD 133
L P+ F+A +F D+A IS I+ R P +VGGT Y++AL+ + DS
Sbjct: 67 LDVADPDRPFSAADFSDAASQAISGIIRRGKRPIVVGGTGLYLRALLHGLV--DSPSGAG 124
Query: 134 ESCFGSLSGIKQLFYFTCICTLNTVLYRLFFAGDEPVGPDSDLARDSSSYSYDLLKDLDP 193
E L R +G + L R L+ +DP
Sbjct: 125 E------------------------LRRRLQEEARELGNQAMLER---------LRRVDP 151
Query: 194 VAANRIHPNNYRKINQYLSLYARTGVLPSKLYQ---GKAAE 231
A IHPNN +I + L +Y TG+ P YQ G AAE
Sbjct: 152 QLATTIHPNNLVRIIRGLEVYHLTGI-PLSRYQHEHGFAAE 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,512,751
Number of Sequences: 539616
Number of extensions: 3767691
Number of successful extensions: 19355
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 409
Number of HSP's that attempted gapping in prelim test: 17764
Number of HSP's gapped (non-prelim): 1839
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)