Query 048458
Match_columns 386
No_of_seqs 134 out of 1476
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.3 5.2E-10 1.8E-14 103.8 23.3 200 114-368 69-284 (315)
2 2woz_A Kelch repeat and BTB do 99.3 5.4E-10 1.8E-14 103.8 23.0 198 114-367 80-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.3 1.1E-09 3.7E-14 101.1 24.5 222 91-369 49-280 (306)
4 1zgk_A Kelch-like ECH-associat 99.2 3.4E-09 1.2E-13 98.0 25.0 220 91-369 64-295 (308)
5 2xn4_A Kelch-like protein 2; s 99.2 3.5E-09 1.2E-13 97.5 24.8 221 91-368 55-283 (302)
6 2vpj_A Kelch-like protein 12; 99.2 6.3E-09 2.2E-13 95.6 24.2 220 91-369 56-286 (301)
7 3ii7_A Kelch-like protein 7; p 99.1 5.1E-09 1.7E-13 96.5 20.3 201 114-369 26-233 (306)
8 1zgk_A Kelch-like ECH-associat 99.1 8.4E-09 2.9E-13 95.3 21.0 201 114-369 41-248 (308)
9 2xn4_A Kelch-like protein 2; s 99.1 2.4E-08 8.1E-13 91.8 23.2 199 114-369 32-237 (302)
10 2vpj_A Kelch-like protein 12; 99.1 2E-08 6.9E-13 92.2 22.2 198 113-369 32-239 (301)
11 4asc_A Kelch repeat and BTB do 99.1 1.7E-08 5.8E-13 93.5 20.9 155 196-369 67-229 (315)
12 2woz_A Kelch repeat and BTB do 99.0 3E-08 1E-12 92.0 20.3 153 197-369 79-239 (318)
13 2uvk_A YJHT; unknown function, 99.0 2.8E-08 9.7E-13 93.6 19.2 227 92-369 14-302 (357)
14 1fs1_A SKP2 F-BOX, cyclin A/CD 98.9 1.7E-10 5.7E-15 77.4 0.9 42 2-43 9-50 (53)
15 2e31_A FBS1, F-box only protei 98.9 2.9E-10 9.8E-15 103.3 1.2 48 2-49 51-99 (297)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.8 4.8E-07 1.6E-11 87.5 21.1 47 1-47 18-64 (445)
17 2zwa_A Leucine carboxyl methyl 98.8 9.2E-07 3.1E-11 91.0 22.9 154 195-369 467-643 (695)
18 2uvk_A YJHT; unknown function, 98.7 5.4E-07 1.8E-11 84.7 18.3 160 196-368 168-349 (357)
19 3v7d_B Cell division control p 98.7 6E-06 2E-10 79.9 25.3 43 2-44 15-58 (464)
20 1p22_A F-BOX/WD-repeat protein 98.5 8.1E-06 2.8E-10 78.6 19.6 46 2-47 11-60 (435)
21 1k3i_A Galactose oxidase precu 98.4 5.3E-06 1.8E-10 84.8 17.3 109 113-263 220-329 (656)
22 2zwa_A Leucine carboxyl methyl 98.1 2.9E-05 9.8E-10 79.9 14.8 156 195-369 411-591 (695)
23 3l2o_B F-box only protein 4; s 97.8 2.8E-06 9.7E-11 76.4 -0.7 51 2-52 5-55 (312)
24 1k3i_A Galactose oxidase precu 97.6 0.0003 1E-08 71.7 12.2 146 199-367 169-329 (656)
25 2ast_B S-phase kinase-associat 97.1 6.7E-05 2.3E-09 69.5 -0.0 40 2-41 9-48 (336)
26 2p1m_B Transport inhibitor res 96.5 0.00033 1.1E-08 70.1 -1.0 35 1-35 5-40 (594)
27 3ogk_B Coronatine-insensitive 95.6 0.0015 5.1E-08 65.3 -0.9 33 3-35 14-47 (592)
28 3ei3_B DNA damage-binding prot 95.4 1.6 5.6E-05 39.9 20.9 142 195-364 140-285 (383)
29 2z2n_A Virginiamycin B lyase; 95.1 1.5 5.3E-05 38.2 20.1 135 196-365 162-299 (299)
30 3jrp_A Fusion protein of prote 94.9 1.9 6.6E-05 38.9 18.1 141 195-362 78-241 (379)
31 3mbr_X Glutamine cyclotransfer 94.4 1.2 4.3E-05 38.8 14.4 114 226-369 25-142 (243)
32 4e54_B DNA damage-binding prot 94.3 0.9 3.1E-05 42.9 14.6 143 195-364 186-330 (435)
33 4gga_A P55CDC, cell division c 94.2 3.5 0.00012 38.4 18.7 199 92-366 110-315 (420)
34 3bws_A Protein LP49; two-domai 94.1 3.7 0.00013 38.1 20.8 141 195-366 233-395 (433)
35 3nol_A Glutamine cyclotransfer 93.8 0.9 3.1E-05 40.2 12.4 113 227-369 49-164 (262)
36 1l0q_A Surface layer protein; 93.3 4.7 0.00016 36.8 19.4 136 195-366 53-194 (391)
37 3dsm_A Uncharacterized protein 93.2 4.6 0.00016 36.4 21.5 145 195-369 63-221 (328)
38 3q7m_A Lipoprotein YFGL, BAMB; 93.1 5.1 0.00018 36.6 18.3 143 196-366 153-301 (376)
39 3q7m_A Lipoprotein YFGL, BAMB; 93.0 2.2 7.6E-05 39.1 14.6 117 224-366 47-167 (376)
40 3jro_A Fusion protein of prote 92.8 2.8 9.7E-05 42.8 16.2 142 195-363 76-240 (753)
41 4e54_B DNA damage-binding prot 92.6 6.8 0.00023 36.7 17.8 32 335-366 404-435 (435)
42 1l0q_A Surface layer protein; 92.4 6.3 0.00021 35.9 20.5 136 195-366 137-280 (391)
43 3jrp_A Fusion protein of prote 92.1 6.4 0.00022 35.3 18.3 115 230-368 171-295 (379)
44 3dwl_C Actin-related protein 2 92.1 2.6 8.7E-05 38.4 13.6 143 195-364 76-239 (377)
45 3v9f_A Two-component system se 91.8 13 0.00044 38.0 21.0 146 196-369 469-619 (781)
46 3nok_A Glutaminyl cyclase; bet 91.4 1.4 4.9E-05 39.0 10.3 111 226-369 59-173 (268)
47 3bws_A Protein LP49; two-domai 91.2 5.5 0.00019 36.9 15.1 140 196-366 144-297 (433)
48 3g4e_A Regucalcin; six bladed 91.0 7.8 0.00027 34.2 23.4 153 197-370 74-239 (297)
49 4aez_A CDC20, WD repeat-contai 90.7 10 0.00035 34.9 22.3 136 195-364 155-296 (401)
50 3hfq_A Uncharacterized protein 90.6 9.1 0.00031 34.2 18.3 117 230-367 50-178 (347)
51 3e5z_A Putative gluconolactona 90.3 8.8 0.0003 33.5 22.7 101 248-370 153-255 (296)
52 1q7f_A NHL, brain tumor CG1071 90.0 8.9 0.0003 33.2 23.1 105 230-361 174-280 (286)
53 1k8k_C P40, ARP2/3 complex 41 89.9 10 0.00036 33.8 18.1 144 195-364 73-236 (372)
54 2iwa_A Glutamine cyclotransfer 89.6 7.7 0.00026 34.2 13.6 110 231-369 32-144 (266)
55 3scy_A Hypothetical bacterial 89.1 9.6 0.00033 34.3 14.6 104 248-368 233-346 (361)
56 2dg1_A DRP35, lactonase; beta 89.0 12 0.0004 33.2 21.3 152 196-369 112-271 (333)
57 1q7f_A NHL, brain tumor CG1071 88.9 11 0.00037 32.6 22.4 112 230-369 131-246 (286)
58 1gxr_A ESG1, transducin-like e 88.8 11 0.00039 32.9 21.9 139 195-367 118-261 (337)
59 2aq5_A Coronin-1A; WD40 repeat 88.5 15 0.00051 33.7 18.9 102 248-369 245-350 (402)
60 4gqb_B Methylosome protein 50; 87.6 16 0.00054 33.1 17.7 99 248-367 192-295 (344)
61 3sjl_D Methylamine dehydrogena 87.5 6.6 0.00023 36.7 12.3 123 229-369 236-372 (386)
62 1k8k_C P40, ARP2/3 complex 41 87.2 16 0.00054 32.6 15.1 139 195-360 29-172 (372)
63 4g56_B MGC81050 protein; prote 86.9 17 0.0006 32.8 19.0 92 248-362 249-344 (357)
64 3dsm_A Uncharacterized protein 86.9 17 0.00057 32.6 21.1 152 195-365 104-257 (328)
65 3u4y_A Uncharacterized protein 85.8 18 0.0006 31.8 21.5 96 249-364 109-210 (331)
66 1ri6_A Putative isomerase YBHE 85.6 18 0.00061 31.7 21.6 107 248-368 200-317 (343)
67 3dwl_C Actin-related protein 2 85.5 18 0.00061 32.5 14.2 60 304-366 227-286 (377)
68 3vl1_A 26S proteasome regulato 85.3 22 0.00075 32.4 21.1 65 285-363 258-324 (420)
69 2z2n_A Virginiamycin B lyase; 85.1 17 0.0006 31.1 21.2 109 230-369 151-262 (299)
70 1rwi_B Serine/threonine-protei 85.1 17 0.00057 30.9 19.9 191 92-363 72-266 (270)
71 2ojh_A Uncharacterized protein 85.1 17 0.00057 30.9 17.7 143 195-368 109-265 (297)
72 3hfq_A Uncharacterized protein 85.0 20 0.00069 31.8 20.2 74 285-369 250-327 (347)
73 2aq5_A Coronin-1A; WD40 repeat 84.8 23 0.00079 32.3 20.0 144 195-368 153-308 (402)
74 3g4e_A Regucalcin; six bladed 84.8 20 0.00067 31.4 16.4 107 226-362 18-140 (297)
75 4g56_B MGC81050 protein; prote 84.3 23 0.00079 32.0 14.4 98 248-366 204-306 (357)
76 3hrp_A Uncharacterized protein 83.9 9.4 0.00032 35.8 11.6 112 229-367 140-255 (409)
77 4ery_A WD repeat-containing pr 83.5 22 0.00075 31.0 21.1 98 248-366 129-228 (312)
78 3odt_A Protein DOA1; ubiquitin 83.4 21 0.00072 30.7 22.8 110 226-365 109-218 (313)
79 1ri6_A Putative isomerase YBHE 83.2 23 0.00078 31.0 20.1 105 248-368 151-271 (343)
80 3mkq_A Coatomer beta'-subunit; 82.9 42 0.0014 33.8 19.0 95 248-364 163-262 (814)
81 2dg1_A DRP35, lactonase; beta 82.7 17 0.00059 32.1 12.6 115 230-367 55-177 (333)
82 2hqs_A Protein TOLB; TOLB, PAL 82.6 31 0.001 32.0 18.6 144 195-369 246-395 (415)
83 2qc5_A Streptogramin B lactona 82.3 23 0.00078 30.4 19.8 110 230-369 156-267 (300)
84 1r5m_A SIR4-interacting protei 81.9 29 0.001 31.3 19.2 98 248-361 310-425 (425)
85 3mmy_A MRNA export factor; mRN 81.9 27 0.00091 30.8 18.3 30 335-364 277-307 (368)
86 2mad_H Methylamine dehydrogena 81.7 29 0.001 31.8 14.0 55 306-366 298-355 (373)
87 1yfq_A Cell cycle arrest prote 81.1 28 0.00095 30.5 23.0 102 248-364 170-285 (342)
88 3v9f_A Two-component system se 81.0 51 0.0017 33.5 21.6 144 196-368 427-575 (781)
89 3vgz_A Uncharacterized protein 80.4 30 0.001 30.5 24.7 142 195-366 163-308 (353)
90 2ghs_A AGR_C_1268P; regucalcin 80.3 31 0.0011 30.7 14.4 106 231-367 61-174 (326)
91 3e5z_A Putative gluconolactona 79.1 14 0.0005 32.1 10.6 109 230-367 38-167 (296)
92 2qc5_A Streptogramin B lactona 79.0 30 0.001 29.6 21.7 137 196-368 83-224 (300)
93 4a11_B DNA excision repair pro 78.6 37 0.0013 30.4 17.6 30 335-364 249-279 (408)
94 1rwi_B Serine/threonine-protei 77.8 31 0.0011 29.1 17.4 138 196-367 87-228 (270)
95 3dm0_A Maltose-binding peripla 77.8 59 0.002 32.3 19.5 95 248-365 541-636 (694)
96 3bg1_A Protein SEC13 homolog; 77.5 33 0.0011 30.2 12.6 54 304-361 189-247 (316)
97 3fm0_A Protein CIAO1; WDR39,SG 77.5 39 0.0013 30.1 17.3 136 195-359 82-223 (345)
98 4a2l_A BT_4663, two-component 77.3 66 0.0023 32.7 23.9 150 197-368 236-393 (795)
99 4a11_B DNA excision repair pro 77.2 40 0.0014 30.2 20.6 54 304-364 314-368 (408)
100 3i2n_A WD repeat-containing pr 76.4 39 0.0013 29.6 22.1 142 195-363 189-355 (357)
101 2fp8_A Strictosidine synthase; 76.3 33 0.0011 30.3 12.3 118 230-367 29-180 (322)
102 3mbr_X Glutamine cyclotransfer 76.1 38 0.0013 29.3 14.5 139 195-369 42-188 (243)
103 2ad6_A Methanol dehydrogenase 75.3 22 0.00074 35.0 11.5 121 224-366 56-190 (571)
104 1got_B GT-beta; complex (GTP-b 75.2 44 0.0015 29.6 20.7 95 248-364 164-260 (340)
105 4aez_A CDC20, WD repeat-contai 74.2 51 0.0018 29.9 20.1 98 248-366 284-385 (401)
106 1yiq_A Quinohemoprotein alcoho 73.7 17 0.00059 36.7 10.5 122 224-366 64-197 (689)
107 4ery_A WD repeat-containing pr 73.6 45 0.0015 28.9 18.8 98 248-365 171-272 (312)
108 3odt_A Protein DOA1; ubiquitin 73.4 43 0.0015 28.6 20.0 94 248-365 205-300 (313)
109 3nol_A Glutamine cyclotransfer 72.8 48 0.0016 29.0 13.7 138 195-369 64-210 (262)
110 1kb0_A Quinohemoprotein alcoho 72.6 10 0.00036 38.2 8.5 122 224-366 71-204 (677)
111 3lrv_A PRE-mRNA-splicing facto 72.1 52 0.0018 29.1 18.0 143 195-366 148-299 (343)
112 2pm9_A Protein WEB1, protein t 71.5 58 0.002 29.3 16.3 94 249-363 241-339 (416)
113 1kv9_A Type II quinohemoprotei 71.5 26 0.0009 35.1 11.2 121 224-366 60-192 (668)
114 4gqb_B Methylosome protein 50; 71.0 58 0.002 29.2 19.0 94 248-365 237-335 (344)
115 3u4y_A Uncharacterized protein 70.9 53 0.0018 28.6 14.2 96 248-366 20-122 (331)
116 2iwa_A Glutamine cyclotransfer 70.4 55 0.0019 28.6 14.7 140 195-369 43-190 (266)
117 2ghs_A AGR_C_1268P; regucalcin 70.4 58 0.002 28.9 22.1 36 335-370 233-269 (326)
118 1nir_A Nitrite reductase; hemo 70.3 81 0.0028 30.5 19.7 118 230-366 236-360 (543)
119 4aow_A Guanine nucleotide-bind 70.3 54 0.0018 28.5 19.6 29 335-363 310-339 (340)
120 1r5m_A SIR4-interacting protei 70.1 61 0.0021 29.0 22.4 96 248-366 227-324 (425)
121 1nir_A Nitrite reductase; hemo 69.5 84 0.0029 30.4 18.5 117 230-364 334-461 (543)
122 2oiz_A Aromatic amine dehydrog 69.1 66 0.0023 29.0 13.9 50 306-362 286-335 (361)
123 3nok_A Glutaminyl cyclase; bet 68.0 63 0.0021 28.4 11.7 135 198-369 77-219 (268)
124 3ow8_A WD repeat-containing pr 67.7 65 0.0022 28.4 19.9 96 248-366 186-284 (321)
125 3lrv_A PRE-mRNA-splicing facto 67.2 44 0.0015 29.6 10.9 97 248-363 149-246 (343)
126 1erj_A Transcriptional repress 66.6 76 0.0026 28.8 22.7 145 195-364 186-344 (393)
127 3zwl_B Eukaryotic translation 66.5 67 0.0023 28.1 22.0 68 285-366 186-254 (369)
128 3k26_A Polycomb protein EED; W 66.1 68 0.0023 28.0 20.8 66 286-361 299-366 (366)
129 1flg_A Protein (quinoprotein e 65.9 58 0.002 32.0 12.2 123 224-367 62-199 (582)
130 2pm7_B Protein transport prote 65.7 66 0.0023 27.8 19.0 56 304-362 180-239 (297)
131 3k26_A Polycomb protein EED; W 65.6 69 0.0024 28.0 17.8 59 304-363 251-320 (366)
132 1pby_B Quinohemoprotein amine 65.5 63 0.0021 27.9 11.5 97 249-369 220-319 (337)
133 3mkq_A Coatomer beta'-subunit; 65.5 1.2E+02 0.0039 30.5 18.8 96 248-364 119-220 (814)
134 4ggc_A P55CDC, cell division c 64.8 66 0.0023 27.5 19.9 27 95-127 34-60 (318)
135 2ynn_A Coatomer subunit beta'; 64.7 70 0.0024 27.7 20.9 56 304-366 208-264 (304)
136 3v7d_B Cell division control p 64.4 89 0.003 28.8 20.8 66 284-364 278-344 (464)
137 3c75_H MADH, methylamine dehyd 64.4 88 0.003 29.4 12.6 116 248-370 286-413 (426)
138 1gxr_A ESG1, transducin-like e 64.4 69 0.0024 27.5 21.9 135 195-366 162-301 (337)
139 3dr2_A Exported gluconolactona 64.2 33 0.0011 30.0 9.3 109 230-367 55-184 (305)
140 2bkl_A Prolyl endopeptidase; m 63.9 1.2E+02 0.0041 30.1 21.5 146 195-368 251-404 (695)
141 1pjx_A Dfpase, DIISOPROPYLFLUO 63.8 49 0.0017 28.5 10.4 112 230-366 28-166 (314)
142 1pgu_A Actin interacting prote 63.2 1.1E+02 0.0036 29.3 18.4 56 304-365 183-242 (615)
143 2hes_X YDR267CP; beta-propelle 63.1 79 0.0027 27.8 21.0 107 248-367 175-286 (330)
144 4a2l_A BT_4663, two-component 63.0 1.3E+02 0.0046 30.3 24.5 149 197-368 283-443 (795)
145 3no2_A Uncharacterized protein 62.9 75 0.0026 27.5 13.2 146 195-369 14-163 (276)
146 3iz6_a 40S ribosomal protein R 62.6 88 0.003 28.1 17.1 100 248-366 180-285 (380)
147 3tc9_A Hypothetical hydrolase; 62.4 1E+02 0.0035 28.8 15.0 114 226-366 141-262 (430)
148 1jmx_B Amine dehydrogenase; ox 62.2 65 0.0022 28.0 11.0 96 248-363 21-136 (349)
149 2ojh_A Uncharacterized protein 61.0 72 0.0025 26.6 19.3 145 197-368 63-213 (297)
150 3sfz_A APAF-1, apoptotic pepti 60.4 1.8E+02 0.0061 31.0 21.8 98 248-366 723-833 (1249)
151 4h5i_A Guanine nucleotide-exch 60.0 97 0.0033 27.8 15.2 77 230-327 280-359 (365)
152 3jro_A Fusion protein of prote 59.3 1.4E+02 0.0047 30.1 14.0 96 248-362 31-133 (753)
153 3frx_A Guanine nucleotide-bind 58.6 93 0.0032 27.1 21.9 94 248-364 176-270 (319)
154 3bg1_A Protein SEC13 homolog; 58.6 93 0.0032 27.1 17.3 63 304-369 238-302 (316)
155 3hrp_A Uncharacterized protein 58.5 1.1E+02 0.0039 28.1 20.0 111 230-367 230-360 (409)
156 2hqs_A Protein TOLB; TOLB, PAL 58.0 1.1E+02 0.0039 28.0 19.4 144 195-368 202-351 (415)
157 1sq9_A Antiviral protein SKI8; 58.0 1E+02 0.0035 27.4 18.8 63 289-364 199-270 (397)
158 3scy_A Hypothetical bacterial 57.9 1E+02 0.0034 27.3 15.8 73 285-368 221-300 (361)
159 3vl1_A 26S proteasome regulato 56.4 1.1E+02 0.0039 27.4 17.3 99 248-361 313-419 (420)
160 3o4h_A Acylamino-acid-releasin 55.9 1.4E+02 0.0049 28.5 15.2 140 196-367 175-320 (582)
161 1w6s_A Methanol dehydrogenase 55.7 65 0.0022 31.9 10.4 122 224-367 56-197 (599)
162 1pgu_A Actin interacting prote 55.7 1.4E+02 0.0049 28.3 18.3 137 195-362 466-615 (615)
163 3dr2_A Exported gluconolactona 54.2 1.1E+02 0.0037 26.5 20.5 106 248-371 169-277 (305)
164 1sq9_A Antiviral protein SKI8; 53.3 1.2E+02 0.0042 26.9 16.7 105 248-364 91-219 (397)
165 3hxj_A Pyrrolo-quinoline quino 52.5 82 0.0028 27.3 9.8 19 248-266 157-175 (330)
166 2ovr_B FBW7, F-BOX/WD repeat p 51.9 1.4E+02 0.0049 27.2 23.3 135 195-362 298-443 (445)
167 3mmy_A MRNA export factor; mRN 51.3 1.2E+02 0.0042 26.3 11.8 94 248-363 64-162 (368)
168 1pjx_A Dfpase, DIISOPROPYLFLUO 50.8 1.2E+02 0.004 25.9 23.4 35 335-369 229-265 (314)
169 3fvz_A Peptidyl-glycine alpha- 50.5 1.3E+02 0.0045 26.4 19.2 205 92-367 29-283 (329)
170 3f3f_A Nucleoporin SEH1; struc 50.4 1.2E+02 0.0041 25.9 14.7 112 230-363 22-145 (351)
171 3ei3_B DNA damage-binding prot 50.3 1.4E+02 0.0047 26.5 18.9 135 195-361 95-236 (383)
172 3vgz_A Uncharacterized protein 49.8 1.3E+02 0.0044 26.1 22.4 101 248-369 164-271 (353)
173 3iz6_a 40S ribosomal protein R 49.0 1.5E+02 0.005 26.6 19.7 101 248-363 271-377 (380)
174 2p4o_A Hypothetical protein; p 48.7 1.3E+02 0.0046 26.0 14.3 106 230-363 42-149 (306)
175 1kb0_A Quinohemoprotein alcoho 47.5 2.3E+02 0.0077 28.2 13.8 31 224-262 122-154 (677)
176 3fm0_A Protein CIAO1; WDR39,SG 47.0 1.5E+02 0.0051 26.1 19.2 101 248-362 172-284 (345)
177 2xyi_A Probable histone-bindin 46.8 1.7E+02 0.0059 26.7 14.8 199 98-360 195-409 (430)
178 1vyh_C Platelet-activating fac 46.2 1.7E+02 0.0059 26.5 20.1 53 304-363 318-371 (410)
179 2kwv_A RAD30 homolog B, DNA po 45.5 10 0.00034 23.4 1.6 19 2-20 21-39 (48)
180 4aow_A Guanine nucleotide-bind 45.2 1.5E+02 0.005 25.5 20.5 94 248-364 195-289 (340)
181 3gre_A Serine/threonine-protei 45.2 1.8E+02 0.006 26.4 13.0 99 248-366 192-297 (437)
182 1yr2_A Prolyl oligopeptidase; 43.7 2.6E+02 0.0089 27.9 20.7 144 195-367 293-447 (741)
183 1qks_A Cytochrome CD1 nitrite 43.5 2.4E+02 0.0082 27.4 21.1 121 230-369 254-382 (567)
184 2vdu_B TRNA (guanine-N(7)-)-me 43.1 2E+02 0.0068 26.4 23.8 72 285-367 318-399 (450)
185 3amr_A 3-phytase; beta-propell 42.0 2E+02 0.007 26.2 20.9 148 195-369 98-273 (355)
186 2pm7_B Protein transport prote 41.9 1.6E+02 0.0056 25.1 19.8 61 304-367 229-292 (297)
187 3azo_A Aminopeptidase; POP fam 41.9 2.5E+02 0.0086 27.2 18.4 148 196-368 217-376 (662)
188 3sre_A PON1, serum paraoxonase 41.7 2E+02 0.007 26.1 16.9 106 247-360 82-211 (355)
189 2fp8_A Strictosidine synthase; 40.6 1.8E+02 0.0062 25.2 13.2 54 248-313 260-313 (322)
190 3i2n_A WD repeat-containing pr 40.1 1.8E+02 0.0062 25.0 21.4 109 229-362 178-292 (357)
191 1n7d_A LDL receptor, low-densi 40.1 2.4E+02 0.0083 28.2 12.0 23 344-366 596-619 (699)
192 2vdu_B TRNA (guanine-N(7)-)-me 40.1 2.2E+02 0.0075 26.0 20.2 68 286-368 210-279 (450)
193 2pbi_B Guanine nucleotide-bind 39.2 2E+02 0.007 25.4 19.4 131 195-358 219-354 (354)
194 1yiq_A Quinohemoprotein alcoho 38.7 3.1E+02 0.011 27.3 13.5 32 224-263 115-148 (689)
195 3v65_B Low-density lipoprotein 37.9 2.3E+02 0.008 25.7 21.1 135 196-364 138-280 (386)
196 2w18_A PALB2, fancn, partner a 36.5 1.6E+02 0.0054 26.9 9.0 35 285-330 52-86 (356)
197 2hz6_A Endoplasmic reticulum t 36.3 7.5 0.00026 35.8 0.0 30 225-262 4-35 (369)
198 2xzm_R RACK1; ribosome, transl 36.0 2.2E+02 0.0075 24.8 11.1 60 304-364 49-110 (343)
199 2hz6_A Endoplasmic reticulum t 35.5 68 0.0023 29.1 6.6 102 229-366 91-197 (369)
200 1evh_A WH1 domain, protein (ME 35.1 54 0.0018 24.5 4.7 40 114-181 13-52 (112)
201 1got_B GT-beta; complex (GTP-b 34.9 2.3E+02 0.0078 24.7 19.9 90 248-358 248-340 (340)
202 2z3z_A Dipeptidyl aminopeptida 34.4 3.4E+02 0.012 26.5 21.5 145 195-364 283-438 (706)
203 4hw6_A Hypothetical protein, I 33.9 2.9E+02 0.0099 25.6 12.5 113 225-364 142-262 (433)
204 1ddw_A GLGF-domain protein hom 33.7 55 0.0019 24.8 4.5 38 114-181 13-51 (120)
205 2pm9_A Protein WEB1, protein t 33.0 2.6E+02 0.0088 24.8 18.3 105 248-364 188-297 (416)
206 2xzm_R RACK1; ribosome, transl 32.0 2.6E+02 0.0087 24.4 20.4 93 248-363 194-287 (343)
207 1erj_A Transcriptional repress 31.7 2.8E+02 0.0096 24.8 13.9 94 248-364 145-241 (393)
208 3ott_A Two-component system se 31.1 4.1E+02 0.014 26.5 12.8 106 233-368 75-181 (758)
209 3m0c_C LDL receptor, low-densi 31.0 4.4E+02 0.015 26.8 15.7 52 230-294 569-621 (791)
210 3ott_A Two-component system se 30.0 4.2E+02 0.015 26.3 22.6 142 197-367 122-266 (758)
211 1npe_A Nidogen, entactin; glyc 29.9 2.4E+02 0.0083 23.5 24.4 110 230-369 133-247 (267)
212 3hxj_A Pyrrolo-quinoline quino 29.9 1.8E+02 0.006 25.0 8.2 28 336-363 299-326 (330)
213 1vyh_C Platelet-activating fac 29.7 3.1E+02 0.011 24.7 22.6 50 248-313 214-265 (410)
214 4ggc_A P55CDC, cell division c 29.2 2.6E+02 0.0088 23.5 16.9 136 195-363 44-183 (318)
215 1egx_A VAsp, vasodilator-stimu 29.2 74 0.0025 23.8 4.6 42 114-182 13-54 (115)
216 3vu4_A KMHSV2; beta-propeller 28.8 3E+02 0.01 24.2 11.9 65 285-363 206-273 (355)
217 4h5i_A Guanine nucleotide-exch 28.4 3.1E+02 0.011 24.3 16.5 142 195-364 156-303 (365)
218 1p22_A F-BOX/WD-repeat protein 28.0 3.4E+02 0.012 24.5 15.6 136 195-364 152-288 (435)
219 2dk7_A Transcription elongatio 28.0 59 0.002 22.3 3.4 21 345-365 23-43 (73)
220 3ow8_A WD repeat-containing pr 27.8 3E+02 0.01 23.8 19.5 90 248-359 228-319 (321)
221 1npe_A Nidogen, entactin; glyc 27.1 2.7E+02 0.0093 23.2 13.7 109 230-367 47-161 (267)
222 3m0c_C LDL receptor, low-densi 26.7 5.2E+02 0.018 26.3 22.9 54 226-293 475-533 (791)
223 3v64_C Agrin; beta propeller, 26.5 3.4E+02 0.012 24.1 21.8 108 230-366 127-239 (349)
224 2ad6_A Methanol dehydrogenase 26.5 4.4E+02 0.015 25.4 13.8 31 224-262 109-141 (571)
225 3sov_A LRP-6, low-density lipo 26.4 3.3E+02 0.011 23.9 10.7 112 230-367 46-160 (318)
226 2p4o_A Hypothetical protein; p 26.1 3.1E+02 0.011 23.5 21.0 28 336-363 216-244 (306)
227 1ijq_A LDL receptor, low-densi 26.0 3.3E+02 0.011 23.7 21.4 110 229-367 87-201 (316)
228 3azo_A Aminopeptidase; POP fam 25.9 4.5E+02 0.015 25.3 13.8 33 335-367 245-280 (662)
229 1i2h_A PSD-ZIP45(homer-1C/VESL 25.8 85 0.0029 25.3 4.6 38 114-181 18-56 (168)
230 2be1_A Serine/threonine-protei 25.5 60 0.002 29.6 4.1 28 341-368 110-137 (339)
231 2oaj_A Protein SNI1; WD40 repe 25.5 5.7E+02 0.019 26.3 14.0 109 230-369 28-137 (902)
232 1ms9_A Trans-sialidase; trans- 24.3 3.1E+02 0.01 27.3 9.2 81 229-324 200-281 (648)
233 1yfq_A Cell cycle arrest prote 24.3 3.3E+02 0.011 23.1 12.2 72 285-368 22-96 (342)
234 2ecf_A Dipeptidyl peptidase IV 24.3 5.1E+02 0.017 25.3 18.6 193 113-367 264-465 (741)
235 2ece_A 462AA long hypothetical 24.2 4.6E+02 0.016 24.8 12.6 98 248-360 228-351 (462)
236 2xbg_A YCF48-like protein; pho 23.4 3.7E+02 0.013 23.4 13.7 139 200-368 101-242 (327)
237 3ju4_A Endo-N-acetylneuraminid 23.3 3.1E+02 0.011 25.8 8.2 62 228-296 346-408 (670)
238 1kv9_A Type II quinohemoprotei 23.3 5.4E+02 0.019 25.3 14.5 32 224-263 111-144 (668)
239 1pby_B Quinohemoprotein amine 22.8 3.5E+02 0.012 22.8 13.6 99 248-365 11-128 (337)
240 2hes_X YDR267CP; beta-propelle 21.8 3.9E+02 0.013 23.0 19.4 54 304-361 271-328 (330)
241 2j04_A TAU60, YPL007P, hypothe 21.7 5.8E+02 0.02 25.0 13.0 116 229-369 139-262 (588)
242 2xzi_A KDNAse, extracellular s 21.3 4E+02 0.014 24.2 9.1 133 198-347 205-351 (386)
243 4gga_A P55CDC, cell division c 21.1 4.5E+02 0.015 23.5 17.4 53 304-364 301-356 (420)
244 3dm0_A Maltose-binding peripla 21.0 5.8E+02 0.02 24.8 19.8 26 335-360 666-692 (694)
245 1jmx_B Amine dehydrogenase; ox 20.6 3.9E+02 0.013 22.7 19.7 32 337-369 260-293 (349)
246 2pbi_B Guanine nucleotide-bind 20.4 4.3E+02 0.015 23.1 14.0 101 248-365 86-189 (354)
247 1xfd_A DIP, dipeptidyl aminope 20.1 6E+02 0.021 24.6 16.5 33 335-367 258-295 (723)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.30 E-value=5.2e-10 Score=103.82 Aligned_cols=200 Identities=9% Similarity=0.055 Sum_probs=131.1
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeecccccccc
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFRR 193 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 193 (386)
++++||.|++|..+|+++..+ . ....+.+ .+ +++.+.......+ ..
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r----------------~--------~~~~~~~-----~~--~lyv~GG~~~~~~---~~ 114 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPR----------------C--------LFGLGEA-----LN--SIYVVGGREIKDG---ER 114 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCE----------------E--------SCEEEEE-----TT--EEEEECCEESSTT---CC
T ss_pred eEEecCCCCeEEECCCCCcch----------------h--------ceeEEEE-----CC--EEEEEeCCcCCCC---Cc
Confidence 789999999999999887664 1 1111011 11 4444433211011 13
Q ss_pred ccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCCC
Q 048458 194 EFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYNT 272 (386)
Q Consensus 194 ~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~ 272 (386)
....+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. ..+......+.+||+.+++|+.+ ++|...
T Consensus 115 ~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--- 187 (315)
T 4asc_A 115 CLDSVMCYDRLSFKWGESD-PLPYV--VYGHTVLSHMDLVYVIGGK-GSDRKCLNKMCVYDPKKFEWKELAPMQTAR--- 187 (315)
T ss_dssp BCCCEEEEETTTTEEEECC-CCSSC--CBSCEEEEETTEEEEECCB-CTTSCBCCCEEEEETTTTEEEECCCCSSCC---
T ss_pred ccceEEEECCCCCcEeECC-CCCCc--ccceeEEEECCEEEEEeCC-CCCCcccceEEEEeCCCCeEEECCCCCCch---
Confidence 4567999999999999998 56554 4556688899999999876 33333346799999999999998 455432
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec--
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-- 350 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-- 350 (386)
.....+..+|+|+++++.... ...-++|+++- ...+|+.+..++..... ..+++. ++.|++...
T Consensus 188 ----~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~~-~~~l~v~GG~~ 253 (315)
T 4asc_A 188 ----SLFGATVHDGRIIVAAGVTDT-----GLTSSAEVYSI--TDNKWAPFEAFPQERSS--LSLVSL-VGTLYAIGGFA 253 (315)
T ss_dssp ----BSCEEEEETTEEEEEEEECSS-----SEEEEEEEEET--TTTEEEEECCCSSCCBS--CEEEEE-TTEEEEEEEEE
T ss_pred ----hceEEEEECCEEEEEeccCCC-----CccceEEEEEC--CCCeEEECCCCCCcccc--eeEEEE-CCEEEEECCcc
Confidence 334567789999999987651 13446788874 24689987654432211 122222 456666422
Q ss_pred -------------CCeEEEEECCCCeEEEee
Q 048458 351 -------------DGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 351 -------------~~~l~~ydl~~~~~~~v~ 368 (386)
...+..||+++++|+.+.
T Consensus 254 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 254 TLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred ccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 124899999999999983
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.30 E-value=5.4e-10 Score=103.85 Aligned_cols=198 Identities=11% Similarity=0.153 Sum_probs=129.3
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeecccccccc
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFRR 193 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 193 (386)
++++||.|++|..+|+++..+ . . ...+.+ .+ +++.+....... ..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r---------------~-~--------~~~~~~-----~~--~iyv~GG~~~~~----~~ 124 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR---------------C-L--------FGLGEV-----DD--KIYVVAGKDLQT----EA 124 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB---------------C-S--------CEEEEE-----TT--EEEEEEEEBTTT----CC
T ss_pred EEEEeCCCCcEEECCCCCccc---------------c-c--------cceEEE-----CC--EEEEEcCccCCC----Cc
Confidence 789999999999999887664 1 1 111011 11 455444422111 13
Q ss_pred ccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCCC
Q 048458 194 EFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYNT 272 (386)
Q Consensus 194 ~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~ 272 (386)
....+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. ..+......+.+||+.+++|+.+ ++|...
T Consensus 125 ~~~~~~~yd~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--- 197 (318)
T 2woz_A 125 SLDSVLCYDPVAAKWSEVK-NLPIK--VYGHNVISHNGMIYCLGGK-TDDKKCTNRVFIYNPKKGDWKDLAPMKTPR--- 197 (318)
T ss_dssp EEEEEEEEETTTTEEEEEC-CCSSC--EESCEEEEETTEEEEECCE-ESSSCBCCCEEEEETTTTEEEEECCCSSCC---
T ss_pred ccceEEEEeCCCCCEeECC-CCCCc--ccccEEEEECCEEEEEcCC-CCCCCccceEEEEcCCCCEEEECCCCCCCc---
Confidence 3467999999999999998 56554 3455678899999999876 32222235799999999999998 444332
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec--
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-- 350 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-- 350 (386)
.....+..+|+|+++++.... ...-++|+++- ...+|+++..++..... ..+++ -++.|++...
T Consensus 198 ----~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~-~~~~i~v~GG~~ 263 (318)
T 2woz_A 198 ----SMFGVAIHKGKIVIAGGVTED-----GLSASVEAFDL--KTNKWEVMTEFPQERSS--ISLVS-LAGSLYAIGGFA 263 (318)
T ss_dssp ----BSCEEEEETTEEEEEEEEETT-----EEEEEEEEEET--TTCCEEECCCCSSCCBS--CEEEE-ETTEEEEECCBC
T ss_pred ----ccceEEEECCEEEEEcCcCCC-----CccceEEEEEC--CCCeEEECCCCCCcccc--eEEEE-ECCEEEEECCee
Confidence 233557789999999986541 12346777773 24679987654432211 12222 2456776522
Q ss_pred -------------CCeEEEEECCCCeEEEe
Q 048458 351 -------------DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 351 -------------~~~l~~ydl~~~~~~~v 367 (386)
...+..||+++++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 264 MIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 13499999999999998
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.29 E-value=1.1e-09 Score=101.07 Aligned_cols=222 Identities=11% Similarity=0.069 Sum_probs=139.6
Q ss_pred eEEeeecccEEEeecCCCCccccEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeec
Q 048458 91 QIVSSCSGLVCLLLNTFHSCHFPMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDH 170 (386)
Q Consensus 91 ~~~~s~~GLl~~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~ 170 (386)
.-++..+|.|++...........+.++||.|++|..+|+++..+ .. ... ..++
T Consensus 49 ~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------------~~--------~~~--~~~~- 101 (306)
T 3ii7_A 49 AACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR----------------DS--------LAA--CAAE- 101 (306)
T ss_dssp CEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC----------------BS--------CEE--EEET-
T ss_pred eEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc----------------cc--------eeE--EEEC-
Confidence 44445677766552222112234889999999999998877664 11 111 1111
Q ss_pred CCCCeEEEEEEEeeeccccccccccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCC---c
Q 048458 171 RTSDFKILLIVHAREVASEQFRREFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTN---K 247 (386)
Q Consensus 171 ~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~---~ 247 (386)
=+++.+..... . ......+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. ...... .
T Consensus 102 ----~~iyv~GG~~~-~----~~~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~ 168 (306)
T 3ii7_A 102 ----GKIYTSGGSEV-G----NSALYLFECYDTRTESWHTKP-SMLTQ--RCSHGMVEANGLIYVCGGS-LGNNVSGRVL 168 (306)
T ss_dssp ----TEEEEECCBBT-T----BSCCCCEEEEETTTTEEEEEC-CCSSC--CBSCEEEEETTEEEEECCE-ESCTTTCEEC
T ss_pred ----CEEEEECCCCC-C----CcEeeeEEEEeCCCCceEeCC-CCcCC--cceeEEEEECCEEEEECCC-CCCCCccccc
Confidence 23444433210 1 134567999999999999998 66554 4455678899999999876 322111 3
Q ss_pred eEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
..+.+||+.+++|+.+ ++|... .....+..+|+|+++++.... ...-++|+++- ...+|+.+..+
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r-------~~~~~~~~~~~i~v~GG~~~~-----~~~~~~~~yd~--~~~~W~~~~~~ 234 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEAR-------KNHGLVFVKDKIFAVGGQNGL-----GGLDNVEYYDI--KLNEWKMVSPM 234 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC-------BSCEEEEETTEEEEECCEETT-----EEBCCEEEEET--TTTEEEECCCC
T ss_pred ceEEEeCCCCCeEEECCCccchh-------hcceEEEECCEEEEEeCCCCC-----CCCceEEEeeC--CCCcEEECCCC
Confidence 6799999999999999 455432 344567779999999886541 11235677763 24679987544
Q ss_pred ecCCCceeEEEEEecCCeEEEEec------CCeEEEEECCCCeEEEeee
Q 048458 327 DLRAQFAWQYLGFGANDEVMLRND------DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~v~~ 369 (386)
+..... ...++. ++.|++... ...+..||+++++|+.+.-
T Consensus 235 p~~r~~--~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 235 PWKGVT--VKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp SCCBSC--CEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred CCCccc--eeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 432111 122222 567777643 1359999999999999854
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.24 E-value=3.4e-09 Score=97.98 Aligned_cols=220 Identities=11% Similarity=0.090 Sum_probs=137.6
Q ss_pred eEEeeecccEEEeecC----CC-CccccEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEee
Q 048458 91 QIVSSCSGLVCLLLNT----FH-SCHFPMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITG 165 (386)
Q Consensus 91 ~~~~s~~GLl~~~~~~----~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (386)
.-++..+|.|++.... .. .....++++||.|++|..+|+++..+ .. ... .
T Consensus 64 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------------~~--------~~~-~ 118 (308)
T 1zgk_A 64 LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPR----------------NR--------IGV-G 118 (308)
T ss_dssp CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCC----------------BT--------CEE-E
T ss_pred ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCc----------------cc--------cEE-E
Confidence 3344557776655221 11 11123899999999999999887664 11 111 1
Q ss_pred eeeecCCCCeEEEEEEEeeeccccccccccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCC
Q 048458 166 FGYDHRTSDFKILLIVHAREVASEQFRREFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGT 245 (386)
Q Consensus 166 ~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~ 245 (386)
.++ + +++.+..... ......+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. ... .
T Consensus 119 -~~~---~--~iyv~GG~~~------~~~~~~~~~yd~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~-~ 181 (308)
T 1zgk_A 119 -VID---G--HIYAVGGSHG------CIHHNSVERYEPERDEWHLVA-PMLTR--RIGVGVAVLNRLLYAVGGF-DGT-N 181 (308)
T ss_dssp -EET---T--EEEEECCEET------TEECCCEEEEETTTTEEEECC-CCSSC--CBSCEEEEETTEEEEECCB-CSS-C
T ss_pred -EEC---C--EEEEEcCCCC------CcccccEEEECCCCCeEeECC-CCCcc--ccceEEEEECCEEEEEeCC-CCC-C
Confidence 111 1 4444433211 123457999999999999998 56544 4455678899999999876 321 1
Q ss_pred CceEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEE
Q 048458 246 NKDIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLF 324 (386)
Q Consensus 246 ~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~ 324 (386)
....+..||+.+++|+.+ ++|... .....+..+|+|+++.+.... ...-++|+++- ...+|+++.
T Consensus 182 ~~~~~~~yd~~~~~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~-----~~~~~v~~yd~--~~~~W~~~~ 247 (308)
T 1zgk_A 182 RLNSAECYYPERNEWRMITAMNTIR-------SGAGVCVLHNCIYAAGGYDGQ-----DQLNSVERYDV--ETETWTFVA 247 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCC-------BSCEEEEETTEEEEECCBCSS-----SBCCCEEEEET--TTTEEEECC
T ss_pred cCceEEEEeCCCCeEeeCCCCCCcc-------ccceEEEECCEEEEEeCCCCC-----CccceEEEEeC--CCCcEEECC
Confidence 136799999999999988 444332 333556779999999876541 12345677763 236899876
Q ss_pred EeecCCCceeEEEEEecCCeEEEEec------CCeEEEEECCCCeEEEeee
Q 048458 325 TVDLRAQFAWQYLGFGANDEVMLRND------DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~v~~ 369 (386)
.++..... ...++ -++.|++... ...+..||+++++|+++.-
T Consensus 248 ~~p~~r~~--~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 248 PMKHRRSA--LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp CCSSCCBS--CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred CCCCCccc--eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 44432211 12222 2567777642 2359999999999999854
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.24 E-value=3.5e-09 Score=97.47 Aligned_cols=221 Identities=10% Similarity=0.104 Sum_probs=138.4
Q ss_pred eEEeeecccEEEeecCC-CCccccEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeee
Q 048458 91 QIVSSCSGLVCLLLNTF-HSCHFPMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYD 169 (386)
Q Consensus 91 ~~~~s~~GLl~~~~~~~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d 169 (386)
.-++..+|.|++..... ......+.++||.|++|..+|+++..+ .. ... . .++
T Consensus 55 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---------------~~---------~~~-~-~~~ 108 (302)
T 2xn4_A 55 AGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR---------------ST---------LGA-A-VLN 108 (302)
T ss_dssp CEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC---------------BS---------CEE-E-EET
T ss_pred ceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc---------------cc---------eEE-E-EEC
Confidence 33445577766552211 111234899999999999999887664 11 111 1 111
Q ss_pred cCCCCeEEEEEEEeeeccccccccccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceE
Q 048458 170 HRTSDFKILLIVHAREVASEQFRREFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDI 249 (386)
Q Consensus 170 ~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~ 249 (386)
+ +++.+..... ......+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++...........
T Consensus 109 ---~--~iyv~GG~~~------~~~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 174 (302)
T 2xn4_A 109 ---G--LLYAVGGFDG------STGLSSVEAYNIKSNEWFHVA-PMNTR--RSSVGVGVVGGLLYAVGGYDVASRQCLST 174 (302)
T ss_dssp ---T--EEEEEEEECS------SCEEEEEEEEETTTTEEEEEC-CCSSC--CBSCEEEEETTEEEEECCEETTTTEECCC
T ss_pred ---C--EEEEEcCCCC------CccCceEEEEeCCCCeEeecC-CCCCc--ccCceEEEECCEEEEEeCCCCCCCccccE
Confidence 2 4444443211 123457999999999999998 56543 44456788999999998762211111356
Q ss_pred EEEEECCCceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeec
Q 048458 250 IVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDL 328 (386)
Q Consensus 250 il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~ 328 (386)
+..||+.+++|+.+ ++|... .....+..+|+|+++.+.... ...-++|+++- ....|+.+..++.
T Consensus 175 ~~~yd~~~~~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~yd~--~~~~W~~~~~~~~ 240 (302)
T 2xn4_A 175 VECYNATTNEWTYIAEMSTRR-------SGAGVGVLNNLLYAVGGHDGP-----LVRKSVEVYDP--TTNAWRQVADMNM 240 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCC-------BSCEEEEETTEEEEECCBSSS-----SBCCCEEEEET--TTTEEEEECCCSS
T ss_pred EEEEeCCCCcEEECCCCcccc-------ccccEEEECCEEEEECCCCCC-----cccceEEEEeC--CCCCEeeCCCCCC
Confidence 99999999999998 455432 334567789999999886541 11235677763 2468998765443
Q ss_pred CCCceeEEEEEecCCeEEEEec------CCeEEEEECCCCeEEEee
Q 048458 329 RAQFAWQYLGFGANDEVMLRND------DGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 329 ~~~~~~~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~v~ 368 (386)
.... ...++ -++.|++... ...+..||+++++|+.+.
T Consensus 241 ~r~~--~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 241 CRRN--AGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp CCBS--CEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred cccc--CeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 2211 12222 2567777643 134999999999999985
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.19 E-value=6.3e-09 Score=95.62 Aligned_cols=220 Identities=8% Similarity=0.028 Sum_probs=137.9
Q ss_pred eEEeeecccEEEeecCC-CCccccEEEEcccccc---ceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeee
Q 048458 91 QIVSSCSGLVCLLLNTF-HSCHFPMFVWNPSTRK---YKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGF 166 (386)
Q Consensus 91 ~~~~s~~GLl~~~~~~~-~~~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (386)
.-++..+|.|++..... ......++++||.|++ |..+++++..+ .. ... .
T Consensus 56 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r----------------~~--------~~~--~ 109 (301)
T 2vpj_A 56 VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR----------------GL--------AGA--T 109 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC----------------BS--------CEE--E
T ss_pred ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc----------------cc--------eeE--E
Confidence 34445567665552211 1112348999999999 99999887664 11 111 1
Q ss_pred eeecCCCCeEEEEEEEeeeccccccccccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCC
Q 048458 167 GYDHRTSDFKILLIVHAREVASEQFRREFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTN 246 (386)
Q Consensus 167 g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~ 246 (386)
.++ =+++.+..... ......+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. ... ..
T Consensus 110 ~~~-----~~lyv~GG~~~------~~~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~-~~ 173 (301)
T 2vpj_A 110 TLG-----DMIYVSGGFDG------SRRHTSMERYDPNIDQWSMLG-DMQTA--REGAGLVVASGVIYCLGGY-DGL-NI 173 (301)
T ss_dssp EET-----TEEEEECCBCS------SCBCCEEEEEETTTTEEEEEE-ECSSC--CBSCEEEEETTEEEEECCB-CSS-CB
T ss_pred EEC-----CEEEEEcccCC------CcccceEEEEcCCCCeEEECC-CCCCC--cccceEEEECCEEEEECCC-CCC-cc
Confidence 111 14444433211 123457999999999999988 55543 3455678899999999876 321 12
Q ss_pred ceEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 247 KDIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 247 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
...+.+||+.+++|+.+ ++|... .....+..+|+|+++++.... ...-++|+++- ...+|+++..
T Consensus 174 ~~~~~~~d~~~~~W~~~~~~p~~r-------~~~~~~~~~~~i~v~GG~~~~-----~~~~~v~~yd~--~~~~W~~~~~ 239 (301)
T 2vpj_A 174 LNSVEKYDPHTGHWTNVTPMATKR-------SGAGVALLNDHIYVVGGFDGT-----AHLSSVEAYNI--RTDSWTTVTS 239 (301)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCC-------BSCEEEEETTEEEEECCBCSS-----SBCCCEEEEET--TTTEEEEECC
T ss_pred cceEEEEeCCCCcEEeCCCCCccc-------ccceEEEECCEEEEEeCCCCC-----cccceEEEEeC--CCCcEEECCC
Confidence 36799999999999998 455432 334567789999999886541 11335666663 2368998765
Q ss_pred eecCCCceeEEEEEecCCeEEEEecC------CeEEEEECCCCeEEEeee
Q 048458 326 VDLRAQFAWQYLGFGANDEVMLRNDD------GELVLYDHKTQEVVQCES 369 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~i~l~~~~------~~l~~ydl~~~~~~~v~~ 369 (386)
++..... ...++. ++.|++.... ..+..||+++++|+.+.-
T Consensus 240 ~p~~r~~--~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 240 MTTPRCY--VGATVL-RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTS 286 (301)
T ss_dssp CSSCCBS--CEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEE
T ss_pred CCCcccc--eeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCC
Confidence 4432211 122222 5677776431 348999999999998854
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.13 E-value=5.1e-09 Score=96.53 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=129.2
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeecccccccc
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFRR 193 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 193 (386)
+.++||.|++|..+++++..+ .. ... . .++ + +++.+.... ..
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r---------------~~---------~~~-~-~~~---~--~lyv~GG~~-------~~ 67 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKR---------------RD---------AAC-V-FWD---N--VVYILGGSQ-------LF 67 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCC---------------BS---------CEE-E-EET---T--EEEEECCBS-------SS
T ss_pred EEEecCCCCCEecCCCCCccc---------------ce---------eEE-E-EEC---C--EEEEEeCCC-------CC
Confidence 899999999999999887664 11 111 1 111 1 344443321 13
Q ss_pred ccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCCC
Q 048458 194 EFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYNT 272 (386)
Q Consensus 194 ~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~ 272 (386)
....+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. ..+......+..||+.+.+|+.+ ++|...
T Consensus 68 ~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--- 140 (306)
T 3ii7_A 68 PIKRMDCYNVVKDSWYSKL-GPPTP--RDSLAACAAEGKIYTSGGS-EVGNSALYLFECYDTRTESWHTKPSMLTQR--- 140 (306)
T ss_dssp BCCEEEEEETTTTEEEEEE-CCSSC--CBSCEEEEETTEEEEECCB-BTTBSCCCCEEEEETTTTEEEEECCCSSCC---
T ss_pred CcceEEEEeCCCCeEEECC-CCCcc--ccceeEEEECCEEEEECCC-CCCCcEeeeEEEEeCCCCceEeCCCCcCCc---
Confidence 4567999999999999998 56543 4455678899999999876 32223336799999999999998 455432
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec--
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-- 350 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-- 350 (386)
.....+..+|+|+++++..... ......-++|+++- ...+|+++..++..... ...++. ++.|++...
T Consensus 141 ----~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~~-~~~i~v~GG~~ 210 (306)
T 3ii7_A 141 ----CSHGMVEANGLIYVCGGSLGNN-VSGRVLNSCEVYDP--ATETWTELCPMIEARKN--HGLVFV-KDKIFAVGGQN 210 (306)
T ss_dssp ----BSCEEEEETTEEEEECCEESCT-TTCEECCCEEEEET--TTTEEEEECCCSSCCBS--CEEEEE-TTEEEEECCEE
T ss_pred ----ceeEEEEECCEEEEECCCCCCC-CcccccceEEEeCC--CCCeEEECCCccchhhc--ceEEEE-CCEEEEEeCCC
Confidence 3334567899999998865410 00001345677763 23689987644322211 122222 566777532
Q ss_pred ----CCeEEEEECCCCeEEEeee
Q 048458 351 ----DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 351 ----~~~l~~ydl~~~~~~~v~~ 369 (386)
...+..||+++++|+.+.-
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCC
T ss_pred CCCCCceEEEeeCCCCcEEECCC
Confidence 1359999999999999854
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.11 E-value=8.4e-09 Score=95.31 Aligned_cols=201 Identities=8% Similarity=0.048 Sum_probs=127.1
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeecccccccc
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFRR 193 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 193 (386)
+.++||.|++|..+++++..+ . . ... . .. .+ +++.+........ ...
T Consensus 41 ~~~~d~~~~~W~~~~~~p~~r---------------~-~--------~~~-~-~~---~~--~lyv~GG~~~~~~--~~~ 87 (308)
T 1zgk_A 41 LEAYNPSNGTWLRLADLQVPR---------------S-G--------LAG-C-VV---GG--LLYAVGGRNNSPD--GNT 87 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCC---------------B-S--------CEE-E-EE---TT--EEEEECCEEEETT--EEE
T ss_pred EEEEcCCCCeEeECCCCCccc---------------c-c--------ceE-E-EE---CC--EEEEECCCcCCCC--CCe
Confidence 899999999999998877664 1 1 111 1 11 12 3443332210000 012
Q ss_pred ccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCCC
Q 048458 194 EFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYNT 272 (386)
Q Consensus 194 ~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~ 272 (386)
....+++|+..+++|+.++ .+|.. ......+.++|.+|.+++. .. ......+..||+.+++|+.+ ++|...
T Consensus 88 ~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r--- 159 (308)
T 1zgk_A 88 DSSALDCYNPMTNQWSPCA-PMSVP--RNRIGVGVIDGHIYAVGGS-HG-CIHHNSVERYEPERDEWHLVAPMLTRR--- 159 (308)
T ss_dssp ECCCEEEEETTTTEEEECC-CCSSC--CBTCEEEEETTEEEEECCE-ET-TEECCCEEEEETTTTEEEECCCCSSCC---
T ss_pred ecceEEEECCCCCeEeECC-CCCcC--ccccEEEEECCEEEEEcCC-CC-CcccccEEEECCCCCeEeECCCCCccc---
Confidence 3457899999999999998 56543 4455678899999999875 22 11125699999999999998 555432
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec--
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-- 350 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-- 350 (386)
.....+..+|+|+++++.... ...-++|+++- ...+|+++..++..... ...++. ++.|++...
T Consensus 160 ----~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~~-~~~iyv~GG~~ 225 (308)
T 1zgk_A 160 ----IGVGVAVLNRLLYAVGGFDGT-----NRLNSAECYYP--ERNEWRMITAMNTIRSG--AGVCVL-HNCIYAAGGYD 225 (308)
T ss_dssp ----BSCEEEEETTEEEEECCBCSS-----CBCCCEEEEET--TTTEEEECCCCSSCCBS--CEEEEE-TTEEEEECCBC
T ss_pred ----cceEEEEECCEEEEEeCCCCC-----CcCceEEEEeC--CCCeEeeCCCCCCcccc--ceEEEE-CCEEEEEeCCC
Confidence 233456679999999886542 11234666663 24689987544432211 122222 567777642
Q ss_pred ----CCeEEEEECCCCeEEEeee
Q 048458 351 ----DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 351 ----~~~l~~ydl~~~~~~~v~~ 369 (386)
...+..||+++++|+.+.-
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECCC
T ss_pred CCCccceEEEEeCCCCcEEECCC
Confidence 1359999999999999854
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.09 E-value=2.4e-08 Score=91.82 Aligned_cols=199 Identities=10% Similarity=0.119 Sum_probs=128.0
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeecccccccc
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFRR 193 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 193 (386)
+.++||.+++|..+++++..+ .. ..++.+ . =+++.+..... ..
T Consensus 32 ~~~~d~~~~~W~~~~~~p~~r---------------~~---------~~~~~~-----~--~~lyv~GG~~~------~~ 74 (302)
T 2xn4_A 32 VECYDFKEERWHQVAELPSRR---------------CR---------AGMVYM-----A--GLVFAVGGFNG------SL 74 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCC---------------BS---------CEEEEE-----T--TEEEEESCBCS------SS
T ss_pred EEEEcCcCCcEeEcccCCccc---------------cc---------ceEEEE-----C--CEEEEEeCcCC------Cc
Confidence 889999999999998877664 11 111011 1 13444332111 12
Q ss_pred ccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCCC
Q 048458 194 EFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYNT 272 (386)
Q Consensus 194 ~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~ 272 (386)
....+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. .. ......+..||+.+++|+.+ ++|...
T Consensus 75 ~~~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r--- 146 (302)
T 2xn4_A 75 RVRTVDSYDPVKDQWTSVA-NMRDR--RSTLGAAVLNGLLYAVGGF-DG-STGLSSVEAYNIKSNEWFHVAPMNTRR--- 146 (302)
T ss_dssp BCCCEEEEETTTTEEEEEC-CCSSC--CBSCEEEEETTEEEEEEEE-CS-SCEEEEEEEEETTTTEEEEECCCSSCC---
T ss_pred cccceEEECCCCCceeeCC-CCCcc--ccceEEEEECCEEEEEcCC-CC-CccCceEEEEeCCCCeEeecCCCCCcc---
Confidence 3457899999999999998 66543 4455678899999999876 32 22235799999999999998 444332
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec--
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-- 350 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-- 350 (386)
.....+..+|+|+++++.... .....-++|+++- ...+|+++..++..... ...++ -++.|++...
T Consensus 147 ----~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~-~~~~iyv~GG~~ 214 (302)
T 2xn4_A 147 ----SSVGVGVVGGLLYAVGGYDVA---SRQCLSTVECYNA--TTNEWTYIAEMSTRRSG--AGVGV-LNNLLYAVGGHD 214 (302)
T ss_dssp ----BSCEEEEETTEEEEECCEETT---TTEECCCEEEEET--TTTEEEEECCCSSCCBS--CEEEE-ETTEEEEECCBS
T ss_pred ----cCceEEEECCEEEEEeCCCCC---CCccccEEEEEeC--CCCcEEECCCCcccccc--ccEEE-ECCEEEEECCCC
Confidence 334557789999999886541 0001234667663 24689988654432211 12222 2567777642
Q ss_pred ----CCeEEEEECCCCeEEEeee
Q 048458 351 ----DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 351 ----~~~l~~ydl~~~~~~~v~~ 369 (386)
...+..||+++++|+.+.-
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECC
T ss_pred CCcccceEEEEeCCCCCEeeCCC
Confidence 1359999999999999864
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.08 E-value=2e-08 Score=92.18 Aligned_cols=198 Identities=12% Similarity=0.135 Sum_probs=128.4
Q ss_pred cEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeeccccccc
Q 048458 113 PMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFR 192 (386)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 192 (386)
.++++||.|++|..+|+++..+ .. .+. ...+ + +++.+..... .
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r---------------~~---------~~~--~~~~---~--~l~v~GG~~~------~ 74 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKR---------------RY---------VAS--VSLH---D--RIYVIGGYDG------R 74 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCC---------------BS---------CEE--EEET---T--EEEEECCBCS------S
T ss_pred EEEEEcCCCCeEEeCCCCChhh---------------cc---------ccE--EEEC---C--EEEEEcCCCC------C
Confidence 3899999999999999877653 11 111 1111 1 3444433211 1
Q ss_pred cccceEEEEEcCCCc---eeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCC
Q 048458 193 REFSDIQVYSLKNNC---WRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDC 268 (386)
Q Consensus 193 ~~~~~~~vyss~~~~---W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~ 268 (386)
.....+++|+..++. |+.++ .+|.. ...+..+.++|.+|.+++. .. ......+..||+.+.+|+.+ ++|..
T Consensus 75 ~~~~~~~~~d~~~~~~~~W~~~~-~~p~~--r~~~~~~~~~~~lyv~GG~-~~-~~~~~~~~~~d~~~~~W~~~~~~p~~ 149 (301)
T 2vpj_A 75 SRLSSVECLDYTADEDGVWYSVA-PMNVR--RGLAGATTLGDMIYVSGGF-DG-SRRHTSMERYDPNIDQWSMLGDMQTA 149 (301)
T ss_dssp CBCCCEEEEETTCCTTCCCEEEC-CCSSC--CBSCEEEEETTEEEEECCB-CS-SCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred ccCceEEEEECCCCCCCeeEECC-CCCCC--ccceeEEEECCEEEEEccc-CC-CcccceEEEEcCCCCeEEECCCCCCC
Confidence 334678999999999 99998 66554 4455678899999999876 32 12236799999999999998 45543
Q ss_pred CCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE
Q 048458 269 LYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR 348 (386)
Q Consensus 269 ~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~ 348 (386)
. .....+..+|+|+++++.... ...-++|+++- ....|+++..++..... ...++ -++.|++.
T Consensus 150 r-------~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~d~--~~~~W~~~~~~p~~r~~--~~~~~-~~~~i~v~ 212 (301)
T 2vpj_A 150 R-------EGAGLVVASGVIYCLGGYDGL-----NILNSVEKYDP--HTGHWTNVTPMATKRSG--AGVAL-LNDHIYVV 212 (301)
T ss_dssp C-------BSCEEEEETTEEEEECCBCSS-----CBCCCEEEEET--TTTEEEEECCCSSCCBS--CEEEE-ETTEEEEE
T ss_pred c-------ccceEEEECCEEEEECCCCCC-----cccceEEEEeC--CCCcEEeCCCCCccccc--ceEEE-ECCEEEEE
Confidence 2 334556779999999886541 12335677763 24689987544322211 12222 25677776
Q ss_pred ec------CCeEEEEECCCCeEEEeee
Q 048458 349 ND------DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 349 ~~------~~~l~~ydl~~~~~~~v~~ 369 (386)
.. ...+..||+++++|+.+.-
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSWTTVTS 239 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred eCCCCCcccceEEEEeCCCCcEEECCC
Confidence 42 2359999999999999864
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.06 E-value=1.7e-08 Score=93.49 Aligned_cols=155 Identities=8% Similarity=0.072 Sum_probs=104.2
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeec-CCCCCceEEEEEECCCceeeee-cCCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKE-SDGTNKDIIVSFDFGDETFRYR-KLPDCLYNTD 273 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~ 273 (386)
..+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++... .+......+..||+.+.+|+.+ ++|...
T Consensus 67 ~~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---- 139 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMP-PLPSP--RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV---- 139 (315)
T ss_dssp EEEEEEETTTTEEEECC-CBSSC--EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----
T ss_pred cceEEecCCCCeEEECC-CCCcc--hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----
Confidence 45899999999999998 56543 445567889999999987511 1223346799999999999988 555443
Q ss_pred CccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec--C
Q 048458 274 HIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND--D 351 (386)
Q Consensus 274 ~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~--~ 351 (386)
.....+..+|+|+++++.... ....-++|+++- ...+|+++..++..... ...++ -++.|++... .
T Consensus 140 ---~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~-~~~~iyv~GG~~~ 207 (315)
T 4asc_A 140 ---YGHTVLSHMDLVYVIGGKGSD----RKCLNKMCVYDP--KKFEWKELAPMQTARSL--FGATV-HDGRIIVAAGVTD 207 (315)
T ss_dssp ---BSCEEEEETTEEEEECCBCTT----SCBCCCEEEEET--TTTEEEECCCCSSCCBS--CEEEE-ETTEEEEEEEECS
T ss_pred ---cceeEEEECCEEEEEeCCCCC----CcccceEEEEeC--CCCeEEECCCCCCchhc--eEEEE-ECCEEEEEeccCC
Confidence 334556789999999986321 122345777774 24689987654432211 12222 2567777532 1
Q ss_pred ----CeEEEEECCCCeEEEeee
Q 048458 352 ----GELVLYDHKTQEVVQCES 369 (386)
Q Consensus 352 ----~~l~~ydl~~~~~~~v~~ 369 (386)
..+..||+++++|+.+.-
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECC
T ss_pred CCccceEEEEECCCCeEEECCC
Confidence 249999999999999864
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.01 E-value=3e-08 Score=91.99 Aligned_cols=153 Identities=10% Similarity=0.109 Sum_probs=103.3
Q ss_pred eEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecC-CCCCceEEEEEECCCceeeee-cCCCCCCCCCC
Q 048458 197 DIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKES-DGTNKDIIVSFDFGDETFRYR-KLPDCLYNTDH 274 (386)
Q Consensus 197 ~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~ 274 (386)
.+++|+..+++|+.++ .+|.. ...+..+.++|.+|.+++. .. +......+.+||+.+.+|+.+ ++|...
T Consensus 79 ~~~~~d~~~~~W~~~~-~~p~~--r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----- 149 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLP-PLPSA--RCLFGLGEVDDKIYVVAGK-DLQTEASLDSVLCYDPVAAKWSEVKNLPIKV----- 149 (318)
T ss_dssp EEEEEETTTTEEEECS-CBSSC--BCSCEEEEETTEEEEEEEE-BTTTCCEEEEEEEEETTTTEEEEECCCSSCE-----
T ss_pred cEEEEeCCCCcEEECC-CCCcc--ccccceEEECCEEEEEcCc-cCCCCcccceEEEEeCCCCCEeECCCCCCcc-----
Confidence 4899999999999998 55553 3455678899999999987 32 223346799999999999998 555443
Q ss_pred ccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec---C
Q 048458 275 IHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND---D 351 (386)
Q Consensus 275 ~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~---~ 351 (386)
.....+..+|+|+++++.... ....-++|+++- ...+|+++..++..... ...++ -++.|++... .
T Consensus 150 --~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~-~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 150 --YGHNVISHNGMIYCLGGKTDD----KKCTNRVFIYNP--KKGDWKDLAPMKTPRSM--FGVAI-HKGKIVIAGGVTED 218 (318)
T ss_dssp --ESCEEEEETTEEEEECCEESS----SCBCCCEEEEET--TTTEEEEECCCSSCCBS--CEEEE-ETTEEEEEEEEETT
T ss_pred --cccEEEEECCEEEEEcCCCCC----CCccceEEEEcC--CCCEEEECCCCCCCccc--ceEEE-ECCEEEEEcCcCCC
Confidence 233456689999999886431 112335677774 24689987644422211 12222 2567777532 1
Q ss_pred ---CeEEEEECCCCeEEEeee
Q 048458 352 ---GELVLYDHKTQEVVQCES 369 (386)
Q Consensus 352 ---~~l~~ydl~~~~~~~v~~ 369 (386)
..+..||+++++|+.+.-
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~~ 239 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMTE 239 (318)
T ss_dssp EEEEEEEEEETTTCCEEECCC
T ss_pred CccceEEEEECCCCeEEECCC
Confidence 348899999999999864
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.98 E-value=2.8e-08 Score=93.58 Aligned_cols=227 Identities=12% Similarity=0.097 Sum_probs=131.3
Q ss_pred EEeeecccEEEeec-CCCCccccEEEEccc--cccceecCCCC-CCchhhhhhccccccccchhhhccCcceeeeEeeee
Q 048458 92 IVSSCSGLVCLLLN-TFHSCHFPMFVWNPS--TRKYKKIPSHK-SFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFG 167 (386)
Q Consensus 92 ~~~s~~GLl~~~~~-~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 167 (386)
..+..+|.|.+... .... ++++||. +++|..+|+++ ..+ .. .+. ..
T Consensus 14 ~~~~~~~~iyv~GG~~~~~----~~~~d~~~~~~~W~~~~~~p~~~R----------------~~--------~~~--~~ 63 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAGTA----WYKLDTQAKDKKWTALAAFPGGPR----------------DQ--------ATS--AF 63 (357)
T ss_dssp EEEEETTEEEEECGGGTTC----EEEEETTSSSCCEEECCCCTTCCC----------------BS--------CEE--EE
T ss_pred EEEEECCEEEEEeCcCCCe----EEEEccccCCCCeeECCCCCCCcC----------------cc--------ceE--EE
Confidence 33344777766522 1233 8999998 49999999877 443 11 111 11
Q ss_pred eecCCCCeEEEEEEEeee-ccccccccccceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCC--
Q 048458 168 YDHRTSDFKILLIVHARE-VASEQFRREFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDG-- 244 (386)
Q Consensus 168 ~d~~~~~ykvv~~~~~~~-~~~~~~~~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~-- 244 (386)
++ + +|+.+..... ... .......+++|+..+++|+.++ .++ ......+..+.++|.+|.+++. ....
T Consensus 64 ~~---~--~lyv~GG~~~~~~~--~~~~~~~v~~yd~~~~~W~~~~-~~~-p~~r~~~~~~~~~~~iyv~GG~-~~~~~~ 133 (357)
T 2uvk_A 64 ID---G--NLYVFGGIGKNSEG--LTQVFNDVHKYNPKTNSWVKLM-SHA-PMGMAGHVTFVHNGKAYVTGGV-NQNIFN 133 (357)
T ss_dssp ET---T--EEEEECCEEECTTS--CEEECCCEEEEETTTTEEEECS-CCC-SSCCSSEEEEEETTEEEEEECC-CHHHHH
T ss_pred EC---C--EEEEEcCCCCCCCc--cceeeccEEEEeCCCCcEEECC-CCC-CcccccceEEEECCEEEEEeCc-CCCcCc
Confidence 11 2 3444433211 000 0133567999999999999998 554 1223344567799999999875 2110
Q ss_pred -------------------------------CCceEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEE
Q 048458 245 -------------------------------TNKDIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFV 292 (386)
Q Consensus 245 -------------------------------~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~ 292 (386)
.....+.+||+.+.+|+.+ ++|... ......+..+|+|++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~------~~~~~~~~~~~~iyv~G 207 (357)
T 2uvk_A 134 GYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG------TAGAAVVNKGDKTWLIN 207 (357)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCC------CBSCEEEEETTEEEEEC
T ss_pred ccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCC------cccccEEEECCEEEEEe
Confidence 0125899999999999998 556432 12246677899999998
Q ss_pred eeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecC---------------------
Q 048458 293 SCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDD--------------------- 351 (386)
Q Consensus 293 ~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~--------------------- 351 (386)
+.... +...-++|.++-+.....|+++..++...... ...++..++.|++....
T Consensus 208 G~~~~----~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~ 282 (357)
T 2uvk_A 208 GEAKP----GLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA-GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLK 282 (357)
T ss_dssp CEEET----TEECCCEEEEECC---CEEEECCCSSTTTCCB-SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCC
T ss_pred eecCC----CcccCceEEEEecCCCCcEEecCCCCCCcccc-cceEEEECCEEEEEcCccccCCcccccccceecccccc
Confidence 75431 11234566665111246899876553322111 11122335677775431
Q ss_pred --CeEEEEECCCCeEEEeee
Q 048458 352 --GELVLYDHKTQEVVQCES 369 (386)
Q Consensus 352 --~~l~~ydl~~~~~~~v~~ 369 (386)
..+..||+++++|+.+.-
T Consensus 283 ~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 283 KSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp CEECCEEEECC---CEEEEE
T ss_pred ceeeEEEEecCCCceeeCCC
Confidence 248899999999999864
No 14
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.92 E-value=1.7e-10 Score=77.41 Aligned_cols=42 Identities=24% Similarity=0.379 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHccCCccccceeeeccccccccccChhhHH
Q 048458 2 SKSLPAKFMLETLLKLPVKTLTRFKCVSKQWHSVISNPTFVA 43 (386)
Q Consensus 2 ~~~LP~dll~~IL~rLP~~sl~r~~~VcK~W~~liss~~F~~ 43 (386)
+..||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 578999999999999999999999999999999999988653
No 15
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.88 E-value=2.9e-10 Score=103.35 Aligned_cols=48 Identities=21% Similarity=0.452 Sum_probs=45.7
Q ss_pred CCCCcHHHHHHHHccCCccccc-eeeeccccccccccChhhHHHHhhcc
Q 048458 2 SKSLPAKFMLETLLKLPVKTLT-RFKCVSKQWHSVISNPTFVALHAKLS 49 (386)
Q Consensus 2 ~~~LP~dll~~IL~rLP~~sl~-r~~~VcK~W~~liss~~F~~~~~~~~ 49 (386)
++.||+||+.+||+|||+++|+ ||++|||+|+.+++++.|.+.++.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 5789999999999999999999 99999999999999999999988766
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.80 E-value=4.8e-07 Score=87.49 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=42.6
Q ss_pred CCCCCcHHHHHHHHccCCccccceeeeccccccccccChhhHHHHhh
Q 048458 1 MSKSLPAKFMLETLLKLPVKTLTRFKCVSKQWHSVISNPTFVALHAK 47 (386)
Q Consensus 1 ~~~~LP~dll~~IL~rLP~~sl~r~~~VcK~W~~liss~~F~~~~~~ 47 (386)
+++.||+|++..||+.|++++|.|+..|||+|+.++.++.+-+....
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~ 64 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCK 64 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHT
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhee
Confidence 36789999999999999999999999999999999999888776654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.77 E-value=9.2e-07 Score=91.01 Aligned_cols=154 Identities=12% Similarity=0.165 Sum_probs=98.2
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE-CCeEEEEEEeecCCCCCceEEEEEECCCceeeeec----CCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL-NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRK----LPDCL 269 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~----~P~~~ 269 (386)
...+++|+..+++|+.++ .+|.. ...+..+.+ +|.+|.+++. ... ..+.+||+.+++|+.++ +|...
T Consensus 467 ~~dv~~yd~~t~~W~~~~-~~p~~--R~~h~~~~~~~~~iyv~GG~-~~~----~~v~~yd~~t~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIK-SLSHT--RFRHSACSLPDGNVLILGGV-TEG----PAMLLYNVTEEIFKDVTPKDEFFQNS 538 (695)
T ss_dssp CCCCEEEETTTTEEEECC-CCSBC--CBSCEEEECTTSCEEEECCB-CSS----CSEEEEETTTTEEEECCCSSGGGGSC
T ss_pred cccEEEEeCCCCcEEECC-CCCCC--cccceEEEEcCCEEEEECCC-CCC----CCEEEEECCCCceEEccCCCCCCCcc
Confidence 456999999999999998 66543 455566775 9999999876 321 17999999999999986 34332
Q ss_pred CCCCCccceeEEEEeC---CeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcc------eEEEEEeecCCCceeEEEEEe
Q 048458 270 YNTDHIHRERSIGILE---KSIALFVSCHTEDNTAGLGICSVYVMKENIEVEH------WINLFTVDLRAQFAWQYLGFG 340 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~~---G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~ 340 (386)
. .. ..+.++ |+|+++++.... .. ...-++|+++-. ... |+++..++...... ...++.
T Consensus 539 ~------~~-~a~v~~~~~~~iyv~GG~~~~-~~--~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~ 605 (695)
T 2zwa_A 539 L------VS-AGLEFDPVSKQGIILGGGFMD-QT--TVSDKAIIFKYD--AENATEPITVIKKLQHPLFQRYG-SQIKYI 605 (695)
T ss_dssp C------BS-CEEEEETTTTEEEEECCBCTT-SS--CBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCCBS-CEEEEE
T ss_pred c------ce-eEEEEeCCCCEEEEECCcCCC-CC--eeeCcEEEEEcc--CCccccceEEEEcCCCCCCCccc-ceEEEe
Confidence 1 11 222323 899999886431 00 122345655531 234 88877643222111 233334
Q ss_pred cCCeEEEEec---------CCeEEEEECCCCeEEEeee
Q 048458 341 ANDEVMLRND---------DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 341 ~~g~i~l~~~---------~~~l~~ydl~~~~~~~v~~ 369 (386)
+++.||+... ...+..||+++++|+.+.+
T Consensus 606 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 606 TPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp ETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 4467777543 2349999999999997665
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.73 E-value=5.4e-07 Score=84.72 Aligned_cols=160 Identities=11% Similarity=0.082 Sum_probs=95.4
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEEC--CCceeeee-cCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDF--GDETFRYR-KLPDCLYNT 272 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~--~~~~~~~i-~~P~~~~~~ 272 (386)
..+++|+..+++|+.+. .+|... ......+.++|.+|.+++. .........+.+||+ .+.+|+.+ ++|....
T Consensus 168 ~~v~~yd~~~~~W~~~~-~~p~~~-~~~~~~~~~~~~iyv~GG~-~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~-- 242 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAG-ESPWYG-TAGAAVVNKGDKTWLINGE-AKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG-- 242 (357)
T ss_dssp CEEEEEETTTTEEEEEE-ECSSCC-CBSCEEEEETTEEEEECCE-EETTEECCCEEEEECC---CEEEECCCSSTTTC--
T ss_pred ccEEEEeCCCCcEEECC-CCCCCC-cccccEEEECCEEEEEeee-cCCCcccCceEEEEecCCCCcEEecCCCCCCcc--
Confidence 58999999999999998 565432 2235678899999999875 221112246778876 89999987 3433221
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCC-----------CC-CCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEe
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDN-----------TA-GLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFG 340 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~-----------~~-~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~ 340 (386)
......+..+|+|+++++...... .. ....-++|+++- ...+|+++..++..... ..++.
T Consensus 243 ---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~---~~~~~ 314 (357)
T 2uvk_A 243 ---VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW--HNGKWDKSGELSQGRAY---GVSLP 314 (357)
T ss_dssp ---CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC--C---CEEEEECSSCCBS---SEEEE
T ss_pred ---cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEec--CCCceeeCCCCCCCccc---ceeEE
Confidence 123456788999999988542100 00 011245566663 23689998766543221 11222
Q ss_pred cCCeEEEEec---C----CeEEEEECCCCeEEEee
Q 048458 341 ANDEVMLRND---D----GELVLYDHKTQEVVQCE 368 (386)
Q Consensus 341 ~~g~i~l~~~---~----~~l~~ydl~~~~~~~v~ 368 (386)
-++.|++... . ..++.+++++++|.+..
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 3567776532 1 24888999999997764
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.70 E-value=6e-06 Score=79.93 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHccCCccccceeeeccccccccccC-hhhHHH
Q 048458 2 SKSLPAKFMLETLLKLPVKTLTRFKCVSKQWHSVISN-PTFVAL 44 (386)
Q Consensus 2 ~~~LP~dll~~IL~rLP~~sl~r~~~VcK~W~~liss-~~F~~~ 44 (386)
+..||+|++.+||+.||+++|.|+..|||+|+.++.+ +..-+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3569999999999999999999999999999999998 654443
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.50 E-value=8.1e-06 Score=78.59 Aligned_cols=46 Identities=26% Similarity=0.311 Sum_probs=40.1
Q ss_pred CCCCcHH----HHHHHHccCCccccceeeeccccccccccChhhHHHHhh
Q 048458 2 SKSLPAK----FMLETLLKLPVKTLTRFKCVSKQWHSVISNPTFVALHAK 47 (386)
Q Consensus 2 ~~~LP~d----ll~~IL~rLP~~sl~r~~~VcK~W~~liss~~F~~~~~~ 47 (386)
++.||+| |+..||+.|++++|.|+++|||+|+.++.++.+-+....
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 60 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 3569999 999999999999999999999999999998776665443
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.43 E-value=5.3e-06 Score=84.76 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=70.9
Q ss_pred cEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeeccccccc
Q 048458 113 PMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFR 192 (386)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 192 (386)
.+.++||.|++|..++.++..+ .. ..... .+..| =+++.+...
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~---------------~~-------~~~~~-~~~~~-----g~lyv~GG~--------- 262 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKH---------------DM-------FCPGI-SMDGN-----GQIVVTGGN--------- 262 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSC---------------CC-------SSCEE-EECTT-----SCEEEECSS---------
T ss_pred EEEEEeCCCCcEEeCcccCCCC---------------CC-------ccccc-cCCCC-----CCEEEeCCC---------
Confidence 4789999999999988765442 00 00111 11111 134443321
Q ss_pred cccceEEEEEcCCCceeecCCCCCCccccCCCceEEE-CCeEEEEEEeecCCCCCceEEEEEECCCceeeee
Q 048458 193 REFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL-NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR 263 (386)
Q Consensus 193 ~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i 263 (386)
....+++|+..++.|..++ .++.. ...+..+.+ ||++|.+++. ..+......+.+||+.+++|+.+
T Consensus 263 -~~~~v~~yd~~t~~W~~~~-~~~~~--R~~~s~~~~~dg~iyv~GG~-~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 263 -DAKKTSLYDSSSDSWIPGP-DMQVA--RGYQSSATMSDGRVFTIGGS-WSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp -STTCEEEEEGGGTEEEECC-CCSSC--CSSCEEEECTTSCEEEECCC-CCSSSCCCCEEEEETTTTEEEEE
T ss_pred -CCCceEEecCcCCceeECC-CCCcc--ccccceEEecCCeEEEEeCc-ccCCcccccceEeCCCCCcceeC
Confidence 1237999999999999998 55543 344556777 9999999873 22222235789999999999986
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.14 E-value=2.9e-05 Score=79.87 Aligned_cols=156 Identities=9% Similarity=0.078 Sum_probs=102.6
Q ss_pred cceEEEEEcCCCceeecCCCCC---CccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVP---CIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDC 268 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p---~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~ 268 (386)
...+++|+..++.|+.++..+| .......+..+.+ +|.+|.+++. .........+..||+.+.+|+.+ ++|..
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~-~~~~~~~~dv~~yd~~t~~W~~~~~~p~~ 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR-KAPHQGLSDNWIFDMKTREWSMIKSLSHT 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB-SSTTCBCCCCEEEETTTTEEEECCCCSBC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC-CCCCCccccEEEEeCCCCcEEECCCCCCC
Confidence 4568999999999998872211 1222445667888 9999999876 43221235689999999999998 55543
Q ss_pred CCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE---eecCCCceeEEEEEecC-C
Q 048458 269 LYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT---VDLRAQFAWQYLGFGAN-D 343 (386)
Q Consensus 269 ~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~---i~~~~~~~~~~~~~~~~-g 343 (386)
. .....+.. +|+|+++++.... . ++|+++- ....|+.+.. ++... .....+.+..+ +
T Consensus 490 R-------~~h~~~~~~~~~iyv~GG~~~~-------~-~v~~yd~--~t~~W~~~~~~g~~p~~r-~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 490 R-------FRHSACSLPDGNVLILGGVTEG-------P-AMLLYNV--TEEIFKDVTPKDEFFQNS-LVSAGLEFDPVSK 551 (695)
T ss_dssp C-------BSCEEEECTTSCEEEECCBCSS-------C-SEEEEET--TTTEEEECCCSSGGGGSC-CBSCEEEEETTTT
T ss_pred c-------ccceEEEEcCCEEEEECCCCCC-------C-CEEEEEC--CCCceEEccCCCCCCCcc-cceeEEEEeCCCC
Confidence 2 23344554 9999999987662 2 7888874 2467998754 22111 11122343444 6
Q ss_pred eEEEEecC--------CeEEEEECCCCe------EEEeee
Q 048458 344 EVMLRNDD--------GELVLYDHKTQE------VVQCES 369 (386)
Q Consensus 344 ~i~l~~~~--------~~l~~ydl~~~~------~~~v~~ 369 (386)
.||+.... ..+..||+++++ |+.+.-
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 77776431 359999999999 887743
No 23
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.76 E-value=2.8e-06 Score=76.36 Aligned_cols=51 Identities=16% Similarity=0.243 Sum_probs=46.4
Q ss_pred CCCCcHHHHHHHHccCCccccceeeeccccccccccChhhHHHHhhcccCC
Q 048458 2 SKSLPAKFMLETLLKLPVKTLTRFKCVSKQWHSVISNPTFVALHAKLSEST 52 (386)
Q Consensus 2 ~~~LP~dll~~IL~rLP~~sl~r~~~VcK~W~~liss~~F~~~~~~~~~~~ 52 (386)
++.||+|++..||+.|++++|+|+.+|||+||.+.+++..-+.++.+..+.
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~~ 55 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPS 55 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGGG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCCC
Confidence 467999999999999999999999999999999999999888887776554
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.64 E-value=0.0003 Score=71.73 Aligned_cols=146 Identities=10% Similarity=0.008 Sum_probs=90.5
Q ss_pred EEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCC-----CCceEEEEEECCCceeeee-cCCCCCC
Q 048458 199 QVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDG-----TNKDIIVSFDFGDETFRYR-KLPDCLY 270 (386)
Q Consensus 199 ~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~-----~~~~~il~fD~~~~~~~~i-~~P~~~~ 270 (386)
+.|+..++.|+.+. .+|. .....+.+ +|++|.+++. .... .....+..||+.+.+|+.+ .+|....
T Consensus 169 ~~~dp~~~~W~~~~-~~P~----~~~~~av~~~~g~l~v~GG~-~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 169 TAPQPGLGRWGPTI-DLPI----VPAAAAIEPTSGRVLMWSSY-RNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD 242 (656)
T ss_dssp CCCCTTSCEEEEEE-ECSS----CCSEEEEETTTTEEEEEEEC-CCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC
T ss_pred ccCCCCCCeeeeec-cCCC----CceeEEEEecCCEEEEEecc-cccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC
Confidence 34555678999877 4544 22234555 9999999876 3211 1224789999999999887 3443221
Q ss_pred CCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec
Q 048458 271 NTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND 350 (386)
Q Consensus 271 ~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~ 350 (386)
. ......+..+|+|+++++... .. +|+++- ....|++...++.. ..+...++..+|+||+...
T Consensus 243 ~----~~~~~~~~~~g~lyv~GG~~~-------~~--v~~yd~--~t~~W~~~~~~~~~--R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 243 M----FCPGISMDGNGQIVVTGGNDA-------KK--TSLYDS--SSDSWIPGPDMQVA--RGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp C----SSCEEEECTTSCEEEECSSST-------TC--EEEEEG--GGTEEEECCCCSSC--CSSCEEEECTTSCEEEECC
T ss_pred C----ccccccCCCCCCEEEeCCCCC-------Cc--eEEecC--cCCceeECCCCCcc--ccccceEEecCCeEEEEeC
Confidence 1 111222345899999998665 33 555553 13579986543321 1113344445778887654
Q ss_pred --C-----CeEEEEECCCCeEEEe
Q 048458 351 --D-----GELVLYDHKTQEVVQC 367 (386)
Q Consensus 351 --~-----~~l~~ydl~~~~~~~v 367 (386)
+ ..+..||+++++|+.+
T Consensus 306 ~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 306 SWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CCCSSSCCCCEEEEETTTTEEEEE
T ss_pred cccCCcccccceEeCCCCCcceeC
Confidence 1 3499999999999997
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.13 E-value=6.7e-05 Score=69.52 Aligned_cols=40 Identities=25% Similarity=0.421 Sum_probs=37.0
Q ss_pred CCCCcHHHHHHHHccCCccccceeeeccccccccccChhh
Q 048458 2 SKSLPAKFMLETLLKLPVKTLTRFKCVSKQWHSVISNPTF 41 (386)
Q Consensus 2 ~~~LP~dll~~IL~rLP~~sl~r~~~VcK~W~~liss~~F 41 (386)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 6789999999999999999999999999999999877653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.47 E-value=0.00033 Score=70.11 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=29.4
Q ss_pred CCCCCcHHHHHHHHccCC-ccccceeeecccccccc
Q 048458 1 MSKSLPAKFMLETLLKLP-VKTLTRFKCVSKQWHSV 35 (386)
Q Consensus 1 ~~~~LP~dll~~IL~rLP-~~sl~r~~~VcK~W~~l 35 (386)
+++.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 367899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.62 E-value=0.0015 Score=65.33 Aligned_cols=33 Identities=9% Similarity=0.202 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHHccC-Cccccceeeecccccccc
Q 048458 3 KSLPAKFMLETLLKL-PVKTLTRFKCVSKQWHSV 35 (386)
Q Consensus 3 ~~LP~dll~~IL~rL-P~~sl~r~~~VcK~W~~l 35 (386)
..||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999887
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.37 E-value=1.6 Score=39.94 Aligned_cols=142 Identities=6% Similarity=0.018 Sum_probs=74.4
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDH 274 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 274 (386)
...+.+|+..++..+... ...........-...-+|.+...+.. + +.|..+|+..+....+....
T Consensus 140 d~~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d------~~i~i~d~~~~~~~~~~~h~------- 204 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFA-KTDSWDYWYCCVDVSVSRQMLATGDS-T------GRLLLLGLDGHEIFKEKLHK------- 204 (383)
T ss_dssp TTEEEEEETTSCEEEEEE-CCCCSSCCEEEEEEETTTTEEEEEET-T------SEEEEEETTSCEEEEEECSS-------
T ss_pred CCEEEEEECCCCceEEEe-ccCCCCCCeEEEEECCCCCEEEEECC-C------CCEEEEECCCCEEEEeccCC-------
Confidence 456888888876655444 11100000000112234554444443 2 78999999766555554221
Q ss_pred ccceeEEEEe-CCe-EEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEec-CCeEEE-Eec
Q 048458 275 IHRERSIGIL-EKS-IALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA-NDEVML-RND 350 (386)
Q Consensus 275 ~~~~~~L~~~-~G~-L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~-~g~i~l-~~~ 350 (386)
.....+.-. +|+ +.+.+. .+ ..+.+|.+....... .....+.... ...-+++.+ ++..++ ...
T Consensus 205 -~~v~~~~~~~~~~~~l~s~~-~d-------~~i~iwd~~~~~~~~--~~~~~~~~~~--~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 205 -AKVTHAEFNPRCDWLMATSS-VD-------ATVKLWDLRNIKDKN--SYIAEMPHEK--PVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp -SCEEEEEECSSCTTEEEEEE-TT-------SEEEEEEGGGCCSTT--CEEEEEECSS--CEEEEEECTTTSCEEEEEES
T ss_pred -CcEEEEEECCCCCCEEEEEe-CC-------CEEEEEeCCCCCccc--ceEEEecCCC--ceEEEEEcCCCCCEEEEEcC
Confidence 122222222 455 444444 34 589999988532112 2333333222 225667777 776555 445
Q ss_pred CCeEEEEECCCCeE
Q 048458 351 DGELVLYDHKTQEV 364 (386)
Q Consensus 351 ~~~l~~ydl~~~~~ 364 (386)
++.+..||+++.+.
T Consensus 272 d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 272 RNEIRVYSSYDWSK 285 (383)
T ss_dssp SSEEEEEETTBTTS
T ss_pred CCcEEEEECCCCcc
Confidence 67899999987653
No 29
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.11 E-value=1.5 Score=38.20 Aligned_cols=135 Identities=8% Similarity=0.046 Sum_probs=67.5
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
..+.+|+. ++...... .+... ....++.+ +|.+|+.... ...|..+|. +..+..+.+|...
T Consensus 162 ~~i~~~~~-~g~~~~~~--~~~~~--~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~~~~~---- 224 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFK--IPTPA--SGPVGITKGNDDALWFVEII-------GNKIGRITT-SGEITEFKIPTPN---- 224 (299)
T ss_dssp TEEEEECT-TCCEEEEE--CSSTT--CCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEECSSTT----
T ss_pred CEEEEEcC-CCcEEEee--CCCCC--CcceeEEECCCCCEEEEccC-------CceEEEECC-CCcEEEEECCCCC----
Confidence 45667777 65555432 11110 11113444 4776544322 168999999 7777766665322
Q ss_pred CccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCC
Q 048458 274 HIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDG 352 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~ 352 (386)
..-..++.. +|+|.+..... ..+..|..+ ..- ..+.++...... ..+++ ++|.+++....+
T Consensus 225 --~~~~~i~~~~~g~l~v~~~~~--------~~i~~~d~~-----g~~-~~~~~~~~~~~~-~~i~~-~~g~l~v~~~~~ 286 (299)
T 2z2n_A 225 --ARPHAITAGAGIDLWFTEWGA--------NKIGRLTSN-----NII-EEYPIQIKSAEP-HGICF-DGETIWFAMECD 286 (299)
T ss_dssp --CCEEEEEECSTTCEEEEETTT--------TEEEEEETT-----TEE-EEEECSSSSCCE-EEEEE-CSSCEEEEETTT
T ss_pred --CCceeEEECCCCCEEEeccCC--------ceEEEECCC-----Cce-EEEeCCCCCCcc-ceEEe-cCCCEEEEecCC
Confidence 122234444 67876665433 355444331 111 122222111111 44555 778899987667
Q ss_pred eEEEEECCCCeEE
Q 048458 353 ELVLYDHKTQEVV 365 (386)
Q Consensus 353 ~l~~ydl~~~~~~ 365 (386)
.+..||+++++++
T Consensus 287 ~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 287 KIGKLTLIKDNME 299 (299)
T ss_dssp EEEEEEEC-----
T ss_pred cEEEEEcCcccCC
Confidence 7999999988754
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.89 E-value=1.9 Score=38.91 Aligned_cols=141 Identities=9% Similarity=0.136 Sum_probs=75.2
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEEC----CeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLN----GAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCL 269 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~----G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~ 269 (386)
...+.+|+..++.|..+. ...... ..-..+.+. |.+...+.. + +.|..+|+.+... ....+....
T Consensus 78 dg~v~iwd~~~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~~~l~~~~~-d------~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIA-VHAVHS--ASVNSVQWAPHEYGPLLLVASS-D------GKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp TSCEEEEEEETTEEEEEE-EECCCS--SCEEEEEECCGGGCSEEEEEET-T------SEEEEEECCTTSCCCEEEEECCT
T ss_pred CCEEEEEEcCCCceeEee-eecCCC--cceEEEEeCCCCCCCEEEEecC-C------CcEEEEecCCCCceeeEEecCCC
Confidence 456889999888876655 221110 011122222 444444443 2 6899999886622 111111111
Q ss_pred CCCCCccceeEEEEe--------------CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeE
Q 048458 270 YNTDHIHRERSIGIL--------------EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQ 335 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~--------------~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 335 (386)
.....+.-. +|.+.+++... ..+.+|.+... ...|....++.... ....
T Consensus 148 ------~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~--~~~~~~~~~~~~h~-~~v~ 210 (379)
T 3jrp_A 148 ------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSD--AQTYVLESTLEGHS-DWVR 210 (379)
T ss_dssp ------TCEEEEEECCCC----------CTTCEEEEEETT--------SCEEEEEEETT--TTEEEEEEEECCCS-SCEE
T ss_pred ------CceEEEEEcCccccccccccCCCCCCEEEEEeCC--------CeEEEEEecCC--CcceeeEEEEeccc-CcEe
Confidence 111122221 46666655544 48999999852 34566666554322 1125
Q ss_pred EEEEecC---CeEEEE-ecCCeEEEEECCCC
Q 048458 336 YLGFGAN---DEVMLR-NDDGELVLYDHKTQ 362 (386)
Q Consensus 336 ~~~~~~~---g~i~l~-~~~~~l~~ydl~~~ 362 (386)
-+++.++ +.+++. ..++.+.+||++++
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 5667777 665554 44667999998886
No 31
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.40 E-value=1.2 Score=38.81 Aligned_cols=114 Identities=9% Similarity=0.043 Sum_probs=73.5
Q ss_pred eE-EECCeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCC
Q 048458 226 TV-HLNGAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGL 303 (386)
Q Consensus 226 ~v-~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~ 303 (386)
++ +.+|.+|--++. ..+..|..+|+.+.+. +.+++|... ....++..+++|+++.....
T Consensus 25 GL~~~~~~LyestG~-----~g~S~v~~vD~~tgkv~~~~~l~~~~-------fgeGi~~~~~~ly~ltw~~~------- 85 (243)
T 3mbr_X 25 GLFYLRGHLYESTGE-----TGRSSVRKVDLETGRILQRAEVPPPY-------FGAGIVAWRDRLIQLTWRNH------- 85 (243)
T ss_dssp EEEEETTEEEEEECC-----TTSCEEEEEETTTCCEEEEEECCTTC-------CEEEEEEETTEEEEEESSSS-------
T ss_pred cEEEECCEEEEECCC-----CCCceEEEEECCCCCEEEEEeCCCCc-------ceeEEEEeCCEEEEEEeeCC-------
Confidence 44 455666654433 1235899999997655 556887653 34456777999999875443
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEecCCeEEEEECCCCeE-EEeee
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRNDDGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~~~~~l~~ydl~~~~~-~~v~~ 369 (386)
. +|+.+- +.-.++.+++... .+.++..++ .+++...+.++..+|++|.+. +.+.+
T Consensus 86 -~--v~v~D~----~tl~~~~ti~~~~----~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 86 -E--GFVYDL----ATLTPRARFRYPG----EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp -E--EEEEET----TTTEEEEEEECSS----CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred -E--EEEEEC----CcCcEEEEEeCCC----CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 3 566663 3356677777654 233444445 578877777899999999775 55555
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.27 E-value=0.9 Score=42.91 Aligned_cols=143 Identities=7% Similarity=0.097 Sum_probs=67.4
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDH 274 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 274 (386)
...+.+|+.+++.-+... ...........-...-+|.+...+.. + +.|..+|+.++....+.. . .
T Consensus 186 D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~-d------g~i~~wd~~~~~~~~~~~--h----~- 250 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFA-SSDTINIWFCSLDVSASSRMVVTGDN-V------GNVILLNMDGKELWNLRM--H----K- 250 (435)
T ss_dssp SSCEEEEETTSCEEEEEE-CCSSCSCCCCCEEEETTTTEEEEECS-S------SBEEEEESSSCBCCCSBC--C----S-
T ss_pred CCEEEEeeccCCceeEEe-ccCCCCccEEEEEECCCCCEEEEEeC-C------CcEeeeccCcceeEEEec--c----c-
Confidence 446788888876554433 11000000111112235655544433 2 678999987654332221 1 0
Q ss_pred ccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-ecCC
Q 048458 275 IHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR-NDDG 352 (386)
Q Consensus 275 ~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~-~~~~ 352 (386)
.....+.-. +|.-.++....+ ..+.||-+........... .... .....-+++.++|..++. ..++
T Consensus 251 -~~v~~v~~~p~~~~~~~s~s~d-------~~v~iwd~~~~~~~~~~~~--~~~h--~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 251 -KKVTHVALNPCCDWFLATASVD-------QTVKIWDLRQVRGKASFLY--SLPH--RHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp -SCEEEEEECTTCSSEEEEEETT-------SBCCEEETTTCCSSSCCSB--CCBC--SSCEEECCBCTTSSEEEEEESSS
T ss_pred -ceEEeeeecCCCceEEEEecCc-------ceeeEEecccccccceEEE--eeec--cccccceeECCCCCeeEEEcCCC
Confidence 112222222 454444444444 5899998764221111100 0000 111134555667765544 4456
Q ss_pred eEEEEECCCCeE
Q 048458 353 ELVLYDHKTQEV 364 (386)
Q Consensus 353 ~l~~ydl~~~~~ 364 (386)
.+.+||+++.+.
T Consensus 319 ~i~iwd~~~~~~ 330 (435)
T 4e54_B 319 EIRVYSASQWDC 330 (435)
T ss_dssp CEEEEESSSSSS
T ss_pred EEEEEECCCCcc
Confidence 799999887653
No 33
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.23 E-value=3.5 Score=38.42 Aligned_cols=199 Identities=10% Similarity=0.150 Sum_probs=99.6
Q ss_pred EEe-eecccEEEeecCCCCccccEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeec
Q 048458 92 IVS-SCSGLVCLLLNTFHSCHFPMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDH 170 (386)
Q Consensus 92 ~~~-s~~GLl~~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~ 170 (386)
+++ |.+++|.+. .++. ++|||..|++...+-...... . . ++.+.|.+
T Consensus 110 ~l~wS~~n~lAvg--ld~t----V~lWd~~tg~~~~~~~~~~~~------------------------~-~-V~sv~fsp 157 (420)
T 4gga_A 110 LVDWSSGNVLAVA--LDNS----VYLWSASSGDILQLLQMEQPG------------------------E-Y-ISSVAWIK 157 (420)
T ss_dssp CEEECTTSEEEEE--ETTE----EEEEETTTCCEEEEEECCSTT------------------------C-C-EEEEEECT
T ss_pred eEEECCCCEEEEE--eCCE----EEEEECCCCCEEEEEEecCCC------------------------C-c-EEEEEECC
Confidence 344 567777666 4566 999999999877553322221 0 1 12556666
Q ss_pred CCCCeEEEEEEEeeeccccccccccceEEEEEcCCCcee-ecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceE
Q 048458 171 RTSDFKILLIVHAREVASEQFRREFSDIQVYSLKNNCWR-RIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDI 249 (386)
Q Consensus 171 ~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~-~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~ 249 (386)
. +.|-++ .. ....+.+|+.+++.-. ... .. ......+..+|.+...+.. + +.
T Consensus 158 d-g~~las--gs-----------~Dg~v~iWd~~~~~~~~~~~-~h-----~~~v~~~s~~~~~l~sgs~-d------~~ 210 (420)
T 4gga_A 158 E-GNYLAV--GT-----------SSAEVQLWDVQQQKRLRNMT-SH-----SARVGSLSWNSYILSSGSR-S------GH 210 (420)
T ss_dssp T-SSEEEE--EE-----------TTSCEEEEETTTTEEEEEEC-CC-----SSCEEEEEEETTEEEEEET-T------SE
T ss_pred C-CCEEEE--EE-----------CCCeEEEEEcCCCcEEEEEe-CC-----CCceEEEeeCCCEEEEEeC-C------Cc
Confidence 3 333222 22 2456889998876421 111 10 1111245566665444443 2 67
Q ss_pred EEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeec
Q 048458 250 IVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDL 328 (386)
Q Consensus 250 il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~ 328 (386)
+..+|..........+.... .....+... +|+..+..... ..+.||...... ..+........
T Consensus 211 i~~~d~~~~~~~~~~~~~h~------~~~~~~~~~~~g~~l~s~~~D--------~~v~i~~~~~~~--~~~~~~~~~~~ 274 (420)
T 4gga_A 211 IHHHDVRVAEHHVATLSGHS------QEVCGLRWAPDGRHLASGGND--------NLVNVWPSAPGE--GGWVPLQTFTQ 274 (420)
T ss_dssp EEEEETTSSSCEEEEEECCS------SCEEEEEECTTSSEEEEEETT--------SCEEEEESSCCS--SCSCCSEEECC
T ss_pred eeEeeecccceeeEEecccc------cceeeeeecCCCCeeeeeecc--------ccceEEeecccc--ccceeeeeecc
Confidence 88888876544433222221 122222222 56655544433 588999876421 12222222211
Q ss_pred CCCceeEEEEEecCC-eEEEE-e--cCCeEEEEECCCCeEEE
Q 048458 329 RAQFAWQYLGFGAND-EVMLR-N--DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 329 ~~~~~~~~~~~~~~g-~i~l~-~--~~~~l~~ydl~~~~~~~ 366 (386)
.. .....+++.+++ .++.. . .++.+.+||+++++...
T Consensus 275 ~~-~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 275 HQ-GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp CS-SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred cC-CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 11 111344455433 34433 2 24568889988887544
No 34
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.10 E-value=3.7 Score=38.11 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=73.4
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCC--CceEEEEEECCCceeeee-cCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGT--NKDIIVSFDFGDETFRYR-KLPDCL 269 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~--~~~~il~fD~~~~~~~~i-~~P~~~ 269 (386)
...+.+|+.+++.....- +.... ...+.+ +|...+.+.. +.+.. ..+.|..+|+.+...... ..+.
T Consensus 233 ~~~i~~~d~~~~~~~~~~---~~~~~---~~~~~~~~~g~~l~~~~~-~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-- 303 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKT---DKIGL---PRGLLLSKDGKELYIAQF-SASNQESGGGRLGIYSMDKEKLIDTIGPPG-- 303 (433)
T ss_dssp TTEEEEEETTTTEEEEEC---CCCSE---EEEEEECTTSSEEEEEEE-ESCTTCSCCEEEEEEETTTTEEEEEEEEEE--
T ss_pred CCcEEEEECCCCcEEEEe---cCCCC---ceEEEEcCCCCEEEEEEC-CCCccccCCCeEEEEECCCCcEEeeccCCC--
Confidence 346888998876543222 11100 012222 5655555543 22110 136899999987654332 2111
Q ss_pred CCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEE
Q 048458 270 YNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VML 347 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l 347 (386)
....+.-. +|+..++....+ ..+.+|.++. ...+..++.... ..-+++.++|. +++
T Consensus 304 -------~~~~~~~~~~g~~l~~~~~~~-------~~v~v~d~~~------~~~~~~~~~~~~--~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 304 -------NKRHIVSGNTENKIYVSDMCC-------SKIEVYDLKE------KKVQKSIPVFDK--PNTIALSPDGKYLYV 361 (433)
T ss_dssp -------CEEEEEECSSTTEEEEEETTT-------TEEEEEETTT------TEEEEEEECSSS--EEEEEECTTSSEEEE
T ss_pred -------CcceEEECCCCCEEEEEecCC-------CEEEEEECCC------CcEEEEecCCCC--CCeEEEcCCCCEEEE
Confidence 11122222 454444443344 5899998763 233344443222 15677778875 554
Q ss_pred EecC---------------CeEEEEECCCCeEEE
Q 048458 348 RNDD---------------GELVLYDHKTQEVVQ 366 (386)
Q Consensus 348 ~~~~---------------~~l~~ydl~~~~~~~ 366 (386)
.... +.++.||+++++...
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred EecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 4432 379999999988644
No 35
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.80 E-value=0.9 Score=40.18 Aligned_cols=113 Identities=12% Similarity=0.048 Sum_probs=71.7
Q ss_pred EEECCeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCE
Q 048458 227 VHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGI 305 (386)
Q Consensus 227 v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~ 305 (386)
.+.+|.||--++. + .+..|..+|+++.+. ..+++|+.. ....++..+++|+++..... .
T Consensus 49 ~~~~~~LyestG~-~----g~S~v~~vD~~Tgkv~~~~~l~~~~-------FgeGit~~g~~ly~ltw~~~--------~ 108 (262)
T 3nol_A 49 FYRNGYFYESTGL-N----GRSSIRKVDIESGKTLQQIELGKRY-------FGEGISDWKDKIVGLTWKNG--------L 108 (262)
T ss_dssp EEETTEEEEEEEE-T----TEEEEEEECTTTCCEEEEEECCTTC-------CEEEEEEETTEEEEEESSSS--------E
T ss_pred EEECCEEEEECCC-C----CCceEEEEECCCCcEEEEEecCCcc-------ceeEEEEeCCEEEEEEeeCC--------E
Confidence 3457777766554 2 125899999997754 556777542 34456778999998866443 3
Q ss_pred EEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEecCCeEEEEECCCCeE-EEeee
Q 048458 306 CSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRNDDGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 306 i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~~~~~l~~ydl~~~~~-~~v~~ 369 (386)
+|+.|- +.-.++.+++... ...++..++ .+++.....++..+|++|.+. ..+.+
T Consensus 109 --v~v~D~----~t~~~~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 109 --GFVWNI----RNLRQVRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp --EEEEET----TTCCEEEEEECSS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred --EEEEEC----ccCcEEEEEECCC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 466663 2345666777644 223444455 466665566799999998764 45555
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.31 E-value=4.7 Score=36.75 Aligned_cols=136 Identities=13% Similarity=0.081 Sum_probs=72.0
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE--ECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH--LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~ 271 (386)
...+.+|+..++.-...- ..... -..+. -+|...+++.. . .+.|..+|+.+.+.... ....
T Consensus 53 d~~i~v~d~~~~~~~~~~-~~~~~-----v~~~~~spdg~~l~~~~~-~-----~~~v~v~d~~~~~~~~~~~~~~---- 116 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATV-PAGSS-----PQGVAVSPDGKQVYVTNM-A-----SSTLSVIDTTSNTVAGTVKTGK---- 116 (391)
T ss_dssp GTEEEEEETTTTEEEEEE-ECSSS-----EEEEEECTTSSEEEEEET-T-----TTEEEEEETTTTEEEEEEECSS----
T ss_pred CCeEEEEECCCCeEEEEE-ECCCC-----ccceEECCCCCEEEEEEC-C-----CCEEEEEECCCCeEEEEEeCCC----
Confidence 457888998876542221 11110 01222 24654444433 1 16899999998765433 3221
Q ss_pred CCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEe
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRN 349 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~ 349 (386)
....+... +|+..++....+ ..+.+|-++. .+. +..+...... ..+++.+++. +++..
T Consensus 117 -----~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~----~~~--~~~~~~~~~~--~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 117 -----SPLGLALSPDGKKLYVTNNGD-------KTVSVINTVT----KAV--INTVSVGRSP--KGIAVTPDGTKVYVAN 176 (391)
T ss_dssp -----SEEEEEECTTSSEEEEEETTT-------TEEEEEETTT----TEE--EEEEECCSSE--EEEEECTTSSEEEEEE
T ss_pred -----CcceEEECCCCCEEEEEeCCC-------CEEEEEECCC----CcE--EEEEecCCCc--ceEEECCCCCEEEEEe
Confidence 11223322 566554444444 5888887653 222 2333322211 5667777775 54543
Q ss_pred -cCCeEEEEECCCCeEEE
Q 048458 350 -DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 350 -~~~~l~~ydl~~~~~~~ 366 (386)
.++.+..||+++++...
T Consensus 177 ~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 177 FDSMSISVIDTVTNSVID 194 (391)
T ss_dssp TTTTEEEEEETTTTEEEE
T ss_pred CCCCEEEEEECCCCeEEE
Confidence 35679999999987643
No 37
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.24 E-value=4.6 Score=36.42 Aligned_cols=145 Identities=12% Similarity=-0.028 Sum_probs=80.1
Q ss_pred cceEEEEEcCCCce-eecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceee-eecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCW-RRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFR-YRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W-~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~ 272 (386)
.-.+.+++..++.- +.++ ..... ..-.+.-+|.+|..... . ..|.++|+.+.+.. .++.+......
T Consensus 63 ~~~v~viD~~t~~~~~~i~-~~~~p----~~i~~~~~g~lyv~~~~-~------~~v~~iD~~t~~~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRIT-GFTSP----RYIHFLSDEKAYVTQIW-D------YRIFIINPKTYEITGYIECPDMDMES 130 (328)
T ss_dssp GTEEEEEETTTCCEEEEEE-CCSSE----EEEEEEETTEEEEEEBS-C------SEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred CCEEEEEECcccEEEEEcC-CCCCC----cEEEEeCCCeEEEEECC-C------CeEEEEECCCCeEEEEEEcCCccccC
Confidence 34688888887654 2232 11110 00012258888776533 2 68999999987764 45655411000
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecC-
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDD- 351 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~- 351 (386)
..-..++..+|+|++...... .++.++-++. .+ .+.+++..... .-++++++|++++....
T Consensus 131 ---~~p~~i~~~~~~lyv~~~~~~-------~~v~viD~~t----~~--~~~~i~~g~~p--~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 131 ---GSTEQMVQYGKYVYVNCWSYQ-------NRILKIDTET----DK--VVDELTIGIQP--TSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp ---CBCCCEEEETTEEEEEECTTC-------CEEEEEETTT----TE--EEEEEECSSCB--CCCEECTTSEEEEEBCCB
T ss_pred ---CCcceEEEECCEEEEEcCCCC-------CEEEEEECCC----Ce--EEEEEEcCCCc--cceEEcCCCCEEEEECCC
Confidence 011123336888887754223 4555544432 22 23344433211 34566778888887643
Q ss_pred ----------CeEEEEECCCCeEE-Eeee
Q 048458 352 ----------GELVLYDHKTQEVV-QCES 369 (386)
Q Consensus 352 ----------~~l~~ydl~~~~~~-~v~~ 369 (386)
..++.+|++++++. .+.+
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEec
Confidence 46999999999875 4554
No 38
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.08 E-value=5.1 Score=36.57 Aligned_cols=143 Identities=8% Similarity=0.069 Sum_probs=70.2
Q ss_pred ceEEEEEcCCC--ceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCce--eeee-cCCCCCC
Q 048458 196 SDIQVYSLKNN--CWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDET--FRYR-KLPDCLY 270 (386)
Q Consensus 196 ~~~~vyss~~~--~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~--~~~i-~~P~~~~ 270 (386)
-.+..++..++ .|+... ..+.........++..+|.+|.-... +.+.++|..+.+ |+.- ..|....
T Consensus 153 g~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~~~~~~v~~g~~~--------g~l~~~d~~tG~~~w~~~~~~~~~~~ 223 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNL-DMPSLSLRGESAPTTAFGAAVVGGDN--------GRVSAVLMEQGQMIWQQRISQATGST 223 (376)
T ss_dssp SEEEEEETTTCCEEEEEEC-CC-----CCCCCCEEETTEEEECCTT--------TEEEEEETTTCCEEEEEECCC-----
T ss_pred CeEEEEECCCCcEEEEEeC-CCCceeecCCCCcEEECCEEEEEcCC--------CEEEEEECCCCcEEEEEecccCCCCc
Confidence 35777787665 487554 22211111224467778887763322 689999997554 4432 2222110
Q ss_pred CCCC-ccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEe
Q 048458 271 NTDH-IHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRN 349 (386)
Q Consensus 271 ~~~~-~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~ 349 (386)
.... .......+..+|.+++.... ..+ ..++-...+..|... ... .....+ .++.|++..
T Consensus 224 ~~~~~~~~~~~p~~~~~~v~~~~~~---------g~l--~~~d~~tG~~~w~~~----~~~---~~~~~~-~~~~l~~~~ 284 (376)
T 3q7m_A 224 EIDRLSDVDTTPVVVNGVVFALAYN---------GNL--TALDLRSGQIMWKRE----LGS---VNDFIV-DGNRIYLVD 284 (376)
T ss_dssp ------CCCCCCEEETTEEEEECTT---------SCE--EEEETTTCCEEEEEC----CCC---EEEEEE-ETTEEEEEE
T ss_pred ccccccccCCCcEEECCEEEEEecC---------cEE--EEEECCCCcEEeecc----CCC---CCCceE-ECCEEEEEc
Confidence 0000 00111223446776665422 233 333321123456542 111 122222 356788887
Q ss_pred cCCeEEEEECCCCeEEE
Q 048458 350 DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 350 ~~~~l~~ydl~~~~~~~ 366 (386)
.++.++.+|+++++..+
T Consensus 285 ~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 285 QNDRVMALTIDGGVTLW 301 (376)
T ss_dssp TTCCEEEEETTTCCEEE
T ss_pred CCCeEEEEECCCCcEEE
Confidence 77789999999998654
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.99 E-value=2.2 Score=39.13 Aligned_cols=117 Identities=9% Similarity=0.064 Sum_probs=65.8
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCCce--eeeecCCCCCCC--CCCccceeEEEEeCCeEEEEEeeCCCCC
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDET--FRYRKLPDCLYN--TDHIHRERSIGILEKSIALFVSCHTEDN 299 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~--~~~i~~P~~~~~--~~~~~~~~~L~~~~G~L~lv~~~~~~~~ 299 (386)
..++..+|.+|..... +.|.+||..+.+ |+. +++..... .........++..+|++++....
T Consensus 47 ~~p~v~~~~v~~~~~~--------g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----- 112 (376)
T 3q7m_A 47 LHPALADNVVYAADRA--------GLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK----- 112 (376)
T ss_dssp CCCEEETTEEEEECTT--------SEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT-----
T ss_pred eccEEECCEEEEEcCC--------CeEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC-----
Confidence 3588899999876544 689999997554 443 33321100 00002344556678887775432
Q ss_pred CCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEE
Q 048458 300 TAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 300 ~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~ 366 (386)
.. |..++-...+..|.... . ......|.. .++.|++...++.++.+|.++++..+
T Consensus 113 ----g~--l~a~d~~tG~~~W~~~~--~--~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 113 ----AQ--VYALNTSDGTVAWQTKV--A--GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp ----SE--EEEEETTTCCEEEEEEC--S--SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ----CE--EEEEECCCCCEEEEEeC--C--CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 23 45555322235675422 1 111102322 25678877777789999999988554
No 40
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.75 E-value=2.8 Score=42.84 Aligned_cols=142 Identities=8% Similarity=0.143 Sum_probs=74.3
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--C--CeEEEEEEeecCCCCCceEEEEEECCCceee-eecCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--N--GAVHWMAIRKESDGTNKDIIVSFDFGDETFR-YRKLPDCL 269 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~ 269 (386)
...+.+|+..++.|..+. ...... ..-..+.+ + |.+...+.. + +.|..+|+.+.... ...+....
T Consensus 76 Dg~I~vwd~~~~~~~~~~-~~~~h~--~~V~~v~~sp~~~~~~l~sgs~-d------g~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIA-VHAVHS--ASVNSVQWAPHEYGPLLLVASS-D------GKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp TSCEEEEEEETTEEEEEE-EECCCS--SCEEEEEECCGGGCSEEEEEET-T------SEEEEEECCSSSCCCCEEEECCS
T ss_pred CCeEEEEECCCCcccccc-cccCCC--CCeEEEEECCCCCCCEEEEEeC-C------CcEEEEEeecCCCcceeEeecCC
Confidence 456889999888876655 221110 01112222 2 544444443 2 68999998766221 11111110
Q ss_pred CCCCCccceeEEEEe--------------CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeE
Q 048458 270 YNTDHIHRERSIGIL--------------EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQ 335 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~--------------~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 335 (386)
.....+.-. +|.+.+++... ..+.+|.+... ...+....++.... ....
T Consensus 146 ------~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d--------g~I~iwd~~~~--~~~~~~~~~~~~h~-~~V~ 208 (753)
T 3jro_A 146 ------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSD--AQTYVLESTLEGHS-DWVR 208 (753)
T ss_dssp ------SCEEEEEECCCC---------CGGGCCEEEEETT--------SCEEEEEEETT--TTEEEEEEEECCCS-SCEE
T ss_pred ------CceEEEEecCcccccccccccCCCCCEEEEEECC--------CeEEEEeccCC--cccceeeeeecCCC-CcEE
Confidence 111112111 35555555543 58999999852 24566655554322 1225
Q ss_pred EEEEecC---CeEEEE-ecCCeEEEEECCCCe
Q 048458 336 YLGFGAN---DEVMLR-NDDGELVLYDHKTQE 363 (386)
Q Consensus 336 ~~~~~~~---g~i~l~-~~~~~l~~ydl~~~~ 363 (386)
-+++.++ +.+++. ..++.+..||+++++
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 5667777 665554 445679999988863
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.56 E-value=6.8 Score=36.65 Aligned_cols=32 Identities=3% Similarity=0.144 Sum_probs=19.9
Q ss_pred EEEEEecCCeEEEEecCCeEEEEECCCCeEEE
Q 048458 335 QYLGFGANDEVMLRNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 335 ~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~ 366 (386)
...+++++|.++....++.+.+||+++++.++
T Consensus 404 s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 404 SLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred EEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 34467788887776666789999999987653
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.41 E-value=6.3 Score=35.88 Aligned_cols=136 Identities=10% Similarity=0.004 Sum_probs=73.4
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE--ECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH--LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~ 271 (386)
...+.+|+.+++.....- ..... . ..+. -+|...+++.. . .+.|..+|+.+...... +...
T Consensus 137 ~~~v~~~d~~~~~~~~~~-~~~~~--~---~~~~~~~dg~~l~~~~~-~-----~~~v~~~d~~~~~~~~~~~~~~---- 200 (391)
T 1l0q_A 137 DKTVSVINTVTKAVINTV-SVGRS--P---KGIAVTPDGTKVYVANF-D-----SMSISVIDTVTNSVIDTVKVEA---- 200 (391)
T ss_dssp TTEEEEEETTTTEEEEEE-ECCSS--E---EEEEECTTSSEEEEEET-T-----TTEEEEEETTTTEEEEEEECSS----
T ss_pred CCEEEEEECCCCcEEEEE-ecCCC--c---ceEEECCCCCEEEEEeC-C-----CCEEEEEECCCCeEEEEEecCC----
Confidence 457888988876543222 11100 0 1222 24654444433 1 16799999988765433 3211
Q ss_pred CCCccceeEEEEe-CCeEEEEEee--CCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEE
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSC--HTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VML 347 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~--~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l 347 (386)
....+... +|+..++... .+ ..+.+|-++. ...+..++.... ..-+++.++|+ +++
T Consensus 201 -----~~~~~~~~~~g~~l~~~~~~~~~-------~~v~~~d~~~------~~~~~~~~~~~~--~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 201 -----APSGIAVNPEGTKAYVTNVDKYF-------NTVSMIDTGT------NKITARIPVGPD--PAGIAVTPDGKKVYV 260 (391)
T ss_dssp -----EEEEEEECTTSSEEEEEEECSSC-------CEEEEEETTT------TEEEEEEECCSS--EEEEEECTTSSEEEE
T ss_pred -----CccceEECCCCCEEEEEecCcCC-------CcEEEEECCC------CeEEEEEecCCC--ccEEEEccCCCEEEE
Confidence 11222222 5655555543 33 6888887763 133444544322 14567777785 545
Q ss_pred Ee-cCCeEEEEECCCCeEEE
Q 048458 348 RN-DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 348 ~~-~~~~l~~ydl~~~~~~~ 366 (386)
.. .++.+..||+++++...
T Consensus 261 s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp EETTTTEEEEEETTTTEEEE
T ss_pred EcCCCCEEEEEECCCCcEEE
Confidence 53 45679999999988644
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.11 E-value=6.4 Score=35.31 Aligned_cols=115 Identities=10% Similarity=0.167 Sum_probs=59.5
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCc--eeeee-cCCCCCCCCCCccceeEEEEe-C---CeEEEEEeeCCCCCCCC
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRYR-KLPDCLYNTDHIHRERSIGIL-E---KSIALFVSCHTEDNTAG 302 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~i-~~P~~~~~~~~~~~~~~L~~~-~---G~L~lv~~~~~~~~~~~ 302 (386)
+|.+...+.. + +.|..+|+.+. .+..+ .+.... .....+.-. + |++.+.....
T Consensus 171 ~~~~l~~~~~-d------g~i~i~d~~~~~~~~~~~~~~~~h~------~~v~~~~~sp~~~~~~~l~s~~~d------- 230 (379)
T 3jrp_A 171 ESRKFVTGGA-D------NLVKIWKYNSDAQTYVLESTLEGHS------DWVRDVAWSPTVLLRSYLASVSQD------- 230 (379)
T ss_dssp TTCEEEEEET-T------SCEEEEEEETTTTEEEEEEEECCCS------SCEEEEEECCCCSSSEEEEEEETT-------
T ss_pred CCCEEEEEeC-C------CeEEEEEecCCCcceeeEEEEeccc------CcEeEEEECCCCCCCCeEEEEeCC-------
Confidence 4555554444 2 57888888643 33333 222211 122233322 3 5655555443
Q ss_pred CCEEEEEEEeecCCCcceEEEEEeecCC-CceeEEEEEecCCe-EEEEecCCeEEEEECC-CCeEEEee
Q 048458 303 LGICSVYVMKENIEVEHWINLFTVDLRA-QFAWQYLGFGANDE-VMLRNDDGELVLYDHK-TQEVVQCE 368 (386)
Q Consensus 303 ~~~i~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~g~-i~l~~~~~~l~~ydl~-~~~~~~v~ 368 (386)
..+.||.++... ..+... ...... .....-+++.+++. ++....++.+.+||++ .++|+.+.
T Consensus 231 -g~i~iwd~~~~~--~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 231 -RTCIIWTQDNEQ--GPWKKT-LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp -SCEEEEEESSTT--SCCEEE-ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred -CEEEEEeCCCCC--ccceee-eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence 589999998521 222221 122111 12225567777776 4445566779999988 45565554
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.06 E-value=2.6 Score=38.37 Aligned_cols=143 Identities=13% Similarity=0.069 Sum_probs=62.6
Q ss_pred cceEEEEEcCCCc-eeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCce----eeeecCCC
Q 048458 195 FSDIQVYSLKNNC-WRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDET----FRYRKLPD 267 (386)
Q Consensus 195 ~~~~~vyss~~~~-W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~----~~~i~~P~ 267 (386)
...+.+|+..++. |+... .+.... ..-..+.+ +|.....+.. + +.|..+|+.+.. ...+.-|.
T Consensus 76 d~~v~vwd~~~~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~~~~~-d------~~i~iwd~~~~~~~~~~~~~~~~h 145 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQTL-VLLRLN--RAATFVRWSPNEDKFAVGSG-A------RVISVCYFEQENDWWVSKHLKRPL 145 (377)
T ss_dssp TSSEEEC------CCCCEE-ECCCCS--SCEEEEECCTTSSCCEEEES-S------SCEEECCC-----CCCCEEECSSC
T ss_pred CCeEEEEEcCCCCceeeee-EecccC--CceEEEEECCCCCEEEEEec-C------CeEEEEEECCcccceeeeEeeccc
Confidence 4468888888766 55443 111100 00011221 4554444433 2 578888888765 23333221
Q ss_pred CCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecC-----CCcceE-------EEEEeecCCCcee
Q 048458 268 CLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENI-----EVEHWI-------NLFTVDLRAQFAW 334 (386)
Q Consensus 268 ~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~-----~~~~W~-------~~~~i~~~~~~~~ 334 (386)
. .....+.-. +|++.+..... ..+.+|.++... ....|. ...++ ......
T Consensus 146 ~-------~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v 208 (377)
T 3dwl_C 146 R-------STILSLDWHPNNVLLAAGCAD--------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWV 208 (377)
T ss_dssp C-------SCEEEEEECTTSSEEEEEESS--------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSE
T ss_pred C-------CCeEEEEEcCCCCEEEEEeCC--------CEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceE
Confidence 1 122233332 56655555443 589999985211 111222 12222 111122
Q ss_pred EEEEEecCCe-EEEEecCCeEEEEECCCCeE
Q 048458 335 QYLGFGANDE-VMLRNDDGELVLYDHKTQEV 364 (386)
Q Consensus 335 ~~~~~~~~g~-i~l~~~~~~l~~ydl~~~~~ 364 (386)
.-+++.+++. ++....++.+..||+++++.
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 5567777776 44455567799999888764
No 45
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.76 E-value=13 Score=38.02 Aligned_cols=146 Identities=8% Similarity=0.001 Sum_probs=79.5
Q ss_pred ceEEEEEcCCCceeecCCCCCC-ccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPC-IPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNT 272 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~-~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 272 (386)
..+..|+..++.|+... .... ......-..+.. +|. .|++.. + ..|..||..++++..+..+.....
T Consensus 469 ~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~i~~i~~d~~g~-lWigt~-~------~Gl~~~~~~~~~~~~~~~~~~l~~- 538 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHY-DTSNSQLLENFVRSIAQDSEGR-FWIGTF-G------GGVGIYTPDMQLVRKFNQYEGFCS- 538 (781)
T ss_dssp TEEEEEESSSSSCCEEE-CTTTSSCSCSCEEEEEECTTCC-EEEEES-S------SCEEEECTTCCEEEEECTTTTCSC-
T ss_pred CceEEEeCCCCeEEecc-cCcccccccceeEEEEEcCCCC-EEEEEc-C------CCEEEEeCCCCeEEEccCCCCCCC-
Confidence 46788888888887654 2210 000011113333 344 466654 2 468999999999988765443321
Q ss_pred CCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecC-CCceeEEEEEecCCeEEEEec
Q 048458 273 DHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLR-AQFAWQYLGFGANDEVMLRND 350 (386)
Q Consensus 273 ~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~g~i~l~~~ 350 (386)
.....+.+. +|.|.+.+. . .+ +.+++.. .+.+.. ++.... ....+.-+..+++|.|++.+.
T Consensus 539 ---~~i~~i~~d~~g~lWi~T~--~--------Gl-v~~~d~~--~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 539 ---NTINQIYRSSKGQMWLATG--E--------GL-VCFPSAR--NFDYQV-FQRKEGLPNTHIRAISEDKNGNIWASTN 601 (781)
T ss_dssp ---SCEEEEEECTTSCEEEEET--T--------EE-EEESCTT--TCCCEE-ECGGGTCSCCCCCEEEECSSSCEEEECS
T ss_pred ---CeeEEEEECCCCCEEEEEC--C--------Cc-eEEECCC--CCcEEE-ccccCCCCCceEEEEEECCCCCEEEEcC
Confidence 233445554 677776654 2 22 1333321 123322 111110 011113455566788999876
Q ss_pred CCeEEEEECCCCeEEEeee
Q 048458 351 DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 351 ~~~l~~ydl~~~~~~~v~~ 369 (386)
.+ +..||+++++++....
T Consensus 602 ~G-l~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 602 TG-ISCYITSKKCFYTYDH 619 (781)
T ss_dssp SC-EEEEETTTTEEEEECG
T ss_pred Cc-eEEEECCCCceEEecc
Confidence 44 9999999999887654
No 46
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.38 E-value=1.4 Score=38.97 Aligned_cols=111 Identities=4% Similarity=-0.047 Sum_probs=68.5
Q ss_pred eE-EECCeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCC
Q 048458 226 TV-HLNGAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGL 303 (386)
Q Consensus 226 ~v-~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~ 303 (386)
++ +.+|.||--+.. + +.|..+|+++.+. +.+ +|+.. ....++..+++|+++.....
T Consensus 59 GL~~~~~~Ly~stG~-~------g~v~~iD~~Tgkv~~~~-l~~~~-------FgeGit~~g~~Ly~ltw~~~------- 116 (268)
T 3nok_A 59 GLVFHQGHFFESTGH-Q------GTLRQLSLESAQPVWME-RLGNI-------FAEGLASDGERLYQLTWTEG------- 116 (268)
T ss_dssp EEEEETTEEEEEETT-T------TEEEECCSSCSSCSEEE-ECTTC-------CEEEEEECSSCEEEEESSSC-------
T ss_pred eEEEECCEEEEEcCC-C------CEEEEEECCCCcEEeEE-CCCCc-------ceeEEEEeCCEEEEEEccCC-------
Confidence 44 345666655443 2 4599999997654 444 66532 33456777899988866443
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEecCCeEEEEECCCCeE-EEeee
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRNDDGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~~~~~l~~ydl~~~~~-~~v~~ 369 (386)
. +|+.|- +.-.++.+|+... ...++..++ .+++.....++..+|++|.+. +.+.+
T Consensus 117 -~--v~V~D~----~Tl~~~~ti~~~~----eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 117 -L--LFTWSG----MPPQRERTTRYSG----EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp -E--EEEEET----TTTEEEEEEECSS----CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred -E--EEEEEC----CcCcEEEEEeCCC----ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 3 566663 2346667777643 123333444 577776667899999999775 45655
No 47
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.16 E-value=5.5 Score=36.91 Aligned_cols=140 Identities=11% Similarity=0.130 Sum_probs=71.6
Q ss_pred ceEEEEEcCCCceeecCCCCCCc-cccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceee-eecCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCI-PCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFR-YRKLPDCLYN 271 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~-~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~ 271 (386)
..+.+|+..++.-.... ..... .....-..+.+ +|.++..+.. + +.|..+|+.+.+.. .++...
T Consensus 144 ~~i~~~d~~~g~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~s~~~-d------~~v~~~d~~~~~~~~~~~~~~---- 211 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLS-PPEKYKKKLGFVETISIPEHNELWVSQMQ-A------NAVHVFDLKTLAYKATVDLTG---- 211 (433)
T ss_dssp SSEEEEETTTCCEEEEC-CCHHHHTTCCEEEEEEEGGGTEEEEEEGG-G------TEEEEEETTTCCEEEEEECSS----
T ss_pred CeEEEEECCCCeEeeec-CcccccccCCceeEEEEcCCCEEEEEECC-C------CEEEEEECCCceEEEEEcCCC----
Confidence 45888998887654322 11000 00000112333 6676655544 2 68999999875443 333111
Q ss_pred CCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEe
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRN 349 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~ 349 (386)
.....+... +|+..++....+ ..+.+|-++. .+ .+..+.... ...-+++.++|. ++...
T Consensus 212 ----~~~~~~~~~~~~~~l~~~~~~~-------~~i~~~d~~~----~~--~~~~~~~~~--~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 212 ----KWSKILLYDPIRDLVYCSNWIS-------EDISVIDRKT----KL--EIRKTDKIG--LPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp ----SSEEEEEEETTTTEEEEEETTT-------TEEEEEETTT----TE--EEEECCCCS--EEEEEEECTTSSEEEEEE
T ss_pred ----CCeeEEEEcCCCCEEEEEecCC-------CcEEEEECCC----Cc--EEEEecCCC--CceEEEEcCCCCEEEEEE
Confidence 112222322 565555554344 5888887763 21 223333222 124566677775 44443
Q ss_pred --------cCCeEEEEECCCCeEEE
Q 048458 350 --------DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 350 --------~~~~l~~ydl~~~~~~~ 366 (386)
.++.+..||+++++...
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEEEE
T ss_pred CCCCccccCCCeEEEEECCCCcEEe
Confidence 24579999999887644
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.02 E-value=7.8 Score=34.16 Aligned_cols=153 Identities=9% Similarity=0.012 Sum_probs=74.6
Q ss_pred eEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCC-----CCCceEEEEEECCCceeeeecCCCCC
Q 048458 197 DIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESD-----GTNKDIIVSFDFGDETFRYRKLPDCL 269 (386)
Q Consensus 197 ~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~-----~~~~~~il~fD~~~~~~~~i~~P~~~ 269 (386)
.+.+|+..++.++.+. ..+..........+.+ +|.+|+-... ... ......|..+|.....-.... ..
T Consensus 74 ~l~~~d~~~g~~~~~~-~~~~~~~~~~~~di~~d~dG~l~~~~~~-~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---~~ 148 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLA-TVDNDKKNNRFNDGKVDPAGRYFAGTMA-EETAPAVLERHQGALYSLFPDHHVKKYFD---QV 148 (297)
T ss_dssp EEEEEETTTTEEEEEE-ECCTTCSSEEEEEEEECTTSCEEEEEEE-CCSBTTBCCTTCEEEEEECTTSCEEEEEE---EE
T ss_pred eEEEEECCCCcEEEEE-ecCCCCCCCCCCCEEECCCCCEEEecCC-cccccccccCCCcEEEEEECCCCEEEEee---cc
Confidence 5788888888877654 2211110111112333 6886554333 210 012368899988643322211 11
Q ss_pred CCCCCccceeEEEEe-CCe-EEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe-ecCCCcee-EEEEEecCCeE
Q 048458 270 YNTDHIHRERSIGIL-EKS-IALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV-DLRAQFAW-QYLGFGANDEV 345 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~-~G~-L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i-~~~~~~~~-~~~~~~~~g~i 345 (386)
..--.++.. +|+ |+++.... ..+.+|.++.. +........+ ........ .-++++.+|.+
T Consensus 149 ------~~pngi~~spdg~~lyv~~~~~--------~~i~~~~~d~~--~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l 212 (297)
T 3g4e_A 149 ------DISNGLDWSLDHKIFYYIDSLS--------YSVDAFDYDLQ--TGQISNRRSVYKLEKEEQIPDGMCIDAEGKL 212 (297)
T ss_dssp ------SBEEEEEECTTSCEEEEEEGGG--------TEEEEEEECTT--TCCEEEEEEEEECCGGGCEEEEEEEBTTSCE
T ss_pred ------ccccceEEcCCCCEEEEecCCC--------CcEEEEeccCC--CCcccCcEEEEECCCCCCCCCeeEECCCCCE
Confidence 011123333 565 44444433 46666655411 1223222111 11111111 44667788888
Q ss_pred EEEec-CCeEEEEECCCCe-EEEeeec
Q 048458 346 MLRND-DGELVLYDHKTQE-VVQCESS 370 (386)
Q Consensus 346 ~l~~~-~~~l~~ydl~~~~-~~~v~~~ 370 (386)
++... .+.+..||+++++ ...+..+
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred EEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 88764 4569999999665 4666664
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.69 E-value=10 Score=34.90 Aligned_cols=136 Identities=10% Similarity=0.060 Sum_probs=69.0
Q ss_pred cceEEEEEcCCCcee-ecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWR-RIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 195 ~~~~~vyss~~~~W~-~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
...+.+|+..++.-. ... .. ...-..+..+|.+...+.. + +.|..+|+....-....+....
T Consensus 155 dg~i~iwd~~~~~~~~~~~-~~-----~~~v~~~~~~~~~l~~~~~-d------g~i~i~d~~~~~~~~~~~~~~~---- 217 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTMA-GH-----QARVGCLSWNRHVLSSGSR-S------GAIHHHDVRIANHQIGTLQGHS---- 217 (401)
T ss_dssp TSCEEEEETTTCCEEEEEC-CC-----SSCEEEEEEETTEEEEEET-T------SEEEEEETTSSSCEEEEEECCS----
T ss_pred CCeEEEEECcCCeEEEEec-CC-----CCceEEEEECCCEEEEEcC-C------CCEEEEecccCcceeeEEcCCC----
Confidence 346888888775422 111 10 1111234556665555444 2 7899999984332222211111
Q ss_pred CccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEe--
Q 048458 274 HIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRN-- 349 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~-- 349 (386)
.....+.-. +|.+.+++... ..+.+|-+... ....++.... .....+++.+++ .++...
T Consensus 218 --~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~~------~~~~~~~~~~-~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 218 --SEVCGLAWRSDGLQLASGGND--------NVVQIWDARSS------IPKFTKTNHN-AAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp --SCEEEEEECTTSSEEEEEETT--------SCEEEEETTCS------SEEEEECCCS-SCCCEEEECTTSTTEEEEECC
T ss_pred --CCeeEEEEcCCCCEEEEEeCC--------CeEEEccCCCC------CccEEecCCc-ceEEEEEECCCCCCEEEEecC
Confidence 122223322 56665555543 48999988741 1222222111 111456666655 455543
Q ss_pred -cCCeEEEEECCCCeE
Q 048458 350 -DDGELVLYDHKTQEV 364 (386)
Q Consensus 350 -~~~~l~~ydl~~~~~ 364 (386)
.++.+..||+++++.
T Consensus 281 s~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 281 TMDKQIHFWNAATGAR 296 (401)
T ss_dssp TTTCEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCCE
Confidence 356799999988764
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=90.57 E-value=9.1 Score=34.20 Aligned_cols=117 Identities=8% Similarity=0.093 Sum_probs=67.0
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecC-CCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKL-PDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~-P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
||.+|..... + ..+.|..||+.++..+.+.. +... ..-..++.. +|+..++..... ..+.
T Consensus 50 dg~l~~~~~~-~----~~~~v~~~~~~~g~~~~~~~~~~~~------~~p~~~a~spdg~~l~~~~~~~-------~~v~ 111 (347)
T 3hfq_A 50 KDCLYSVDKE-D----DEGGIAAWQIDGQTAHKLNTVVAPG------TPPAYVAVDEARQLVYSANYHK-------GTAE 111 (347)
T ss_dssp TCEEEEEEEE-T----TEEEEEEEEEETTEEEEEEEEEEES------CCCSEEEEETTTTEEEEEETTT-------TEEE
T ss_pred CCeEEEEEec-C----CCceEEEEEecCCcEEEeeeeecCC------CCCEEEEECCCCCEEEEEeCCC-------CEEE
Confidence 7887776652 1 12689999998877766532 2111 111233333 566555544344 5899
Q ss_pred EEEEeecCCCcceEEEEEeecCCC-------c-eeEEEEEecCCeEEEEec-CCeEEEEECC-CCeEEEe
Q 048458 308 VYVMKENIEVEHWINLFTVDLRAQ-------F-AWQYLGFGANDEVMLRND-DGELVLYDHK-TQEVVQC 367 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~~-------~-~~~~~~~~~~g~i~l~~~-~~~l~~ydl~-~~~~~~v 367 (386)
+|.++.. .....+..+..... . ...-++++++|++++... +..+..||++ ++++..+
T Consensus 112 v~~~~~~---g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 112 VMKIAAD---GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEECTT---SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEeCCC---CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 9999752 23444445443211 0 114577888888555543 4569999998 6666543
No 51
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.27 E-value=8.8 Score=33.53 Aligned_cols=101 Identities=6% Similarity=0.005 Sum_probs=58.0
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcce-EEEEE
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHW-INLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W-~~~~~ 325 (386)
..|..+|.. .....+.- .. ..-..++.. +|++. +..... ..+.+|.+++. ... .....
T Consensus 153 ~~l~~~~~~-g~~~~~~~--~~------~~~~gi~~s~dg~~l-v~~~~~-------~~i~~~~~~~~---g~~~~~~~~ 212 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIR--DR------VKPNGLAFLPSGNLL-VSDTGD-------NATHRYCLNAR---GETEYQGVH 212 (296)
T ss_dssp CEEEEECTT-SCEEEEEC--CC------SSEEEEEECTTSCEE-EEETTT-------TEEEEEEECSS---SCEEEEEEE
T ss_pred cEEEEECCC-CCEEEeec--CC------CCCccEEECCCCCEE-EEeCCC-------CeEEEEEECCC---CcCcCCCeE
Confidence 589999988 44544421 11 111223333 57766 554444 57777777632 334 22222
Q ss_pred eecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEEeeec
Q 048458 326 VDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQCESS 370 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~v~~~ 370 (386)
+....... .-++++++|.+++.. .+.+..||++.+.++.+..+
T Consensus 213 ~~~~~~~p-~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 213 FTVEPGKT-DGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp ECCSSSCC-CSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEECS
T ss_pred eeCCCCCC-CeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEECC
Confidence 31111111 346778888888887 67799999998877777653
No 52
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.02 E-value=8.9 Score=33.21 Aligned_cols=105 Identities=11% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+|..... . ..|..||...+....+..+... ..-..++.. +|.|++...... ..+.+
T Consensus 174 ~g~l~v~~~~-~------~~i~~~~~~g~~~~~~~~~g~~------~~p~~i~~d~~G~l~v~~~~~~-------~~i~~ 233 (286)
T 1q7f_A 174 KQEIFISDNR-A------HCVKVFNYEGQYLRQIGGEGIT------NYPIGVGINSNGEILIADNHNN-------FNLTI 233 (286)
T ss_dssp SSEEEEEEGG-G------TEEEEEETTCCEEEEESCTTTS------CSEEEEEECTTCCEEEEECSSS-------CEEEE
T ss_pred CCCEEEEECC-C------CEEEEEcCCCCEEEEEccCCcc------CCCcEEEECCCCCEEEEeCCCC-------EEEEE
Confidence 4786654332 2 6899999987766666443221 122234443 688777665432 26777
Q ss_pred EEEeecCCCcceEEEEEeecCCCce-eEEEEEecCCeEEEEecCCeEEEEECCC
Q 048458 309 YVMKENIEVEHWINLFTVDLRAQFA-WQYLGFGANDEVMLRNDDGELVLYDHKT 361 (386)
Q Consensus 309 W~l~~~~~~~~W~~~~~i~~~~~~~-~~~~~~~~~g~i~l~~~~~~l~~ydl~~ 361 (386)
|..+ ..- +.++....... ..-++++++|.+++...+..+..|+...
T Consensus 234 ~~~~-----g~~--~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 234 FTQD-----GQL--ISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ECTT-----SCE--EEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred ECCC-----CCE--EEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 7422 122 22232222111 1457778888888876666788888754
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.86 E-value=10 Score=33.82 Aligned_cols=144 Identities=16% Similarity=0.137 Sum_probs=68.1
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCce----eeeecCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDET----FRYRKLPDC 268 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~----~~~i~~P~~ 268 (386)
...+.+|+..++.+.......... ..-..+.+ +|.....+.. + +.|..+|+.+.. ...+..+..
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~-d------~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVILRIN---RAARCVRWAPNEKKFAVGSG-S------RVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCS---SCEEEEEECTTSSEEEEEET-T------SSEEEEEEETTTTEEEEEEECTTCC
T ss_pred CCeEEEEECCCCeeeeeEEeecCC---CceeEEEECCCCCEEEEEeC-C------CEEEEEEecCCCcceeeeeeecccC
Confidence 346888888887765443111111 00011222 4554444443 2 567777776543 222222211
Q ss_pred CCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecC-----CCcce-------EEEEEeecCCCceeE
Q 048458 269 LYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENI-----EVEHW-------INLFTVDLRAQFAWQ 335 (386)
Q Consensus 269 ~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~-----~~~~W-------~~~~~i~~~~~~~~~ 335 (386)
.....+.-. +|++.++... + ..+.+|.+.... ....| ..+..+... .....
T Consensus 143 -------~~i~~~~~~~~~~~l~~~~~-d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ 206 (372)
T 1k8k_C 143 -------STVLSLDWHPNSVLLAAGSC-D-------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVH 206 (372)
T ss_dssp -------SCEEEEEECTTSSEEEEEET-T-------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEE
T ss_pred -------CCeeEEEEcCCCCEEEEEcC-C-------CCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEE
Confidence 122233322 5665555543 3 589999864211 01112 222222211 11125
Q ss_pred EEEEecCCeEEE-EecCCeEEEEECCCCeE
Q 048458 336 YLGFGANDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 336 ~~~~~~~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
-+++.+++..++ ...++.+..||+++++.
T Consensus 207 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 207 GVCFSANGSRVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp EEEECSSSSEEEEEETTTEEEEEEGGGTTE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 566667775444 45567799999987664
No 54
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.62 E-value=7.7 Score=34.22 Aligned_cols=110 Identities=9% Similarity=0.083 Sum_probs=68.2
Q ss_pred CeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEE
Q 048458 231 GAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVY 309 (386)
Q Consensus 231 G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW 309 (386)
|.+|--... . ....|..+|+.+.+. ..+++|... ....++..+++|++...... . ++
T Consensus 32 g~Lyvstg~-~----~~s~v~~iD~~tg~v~~~i~l~~~~-------fgeGi~~~g~~lyv~t~~~~--------~--v~ 89 (266)
T 2iwa_A 32 DTLFESTGL-Y----GRSSVRQVALQTGKVENIHKMDDSY-------FGEGLTLLNEKLYQVVWLKN--------I--GF 89 (266)
T ss_dssp TEEEEEECS-T----TTCEEEEEETTTCCEEEEEECCTTC-------CEEEEEEETTEEEEEETTCS--------E--EE
T ss_pred CeEEEECCC-C----CCCEEEEEECCCCCEEEEEecCCCc-------ceEEEEEeCCEEEEEEecCC--------E--EE
Confidence 666665432 1 126899999987654 555776532 22345666888888876443 4 55
Q ss_pred EEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEecCCeEEEEECCCCeE-EEeee
Q 048458 310 VMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRNDDGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 310 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~~~~~l~~ydl~~~~~-~~v~~ 369 (386)
+.+- ..-..+.+|+.... ...++..|| .+|+...++.+..+|+++.+. +.+.+
T Consensus 90 viD~----~t~~v~~~i~~g~~---~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 90 IYDR----RTLSNIKNFTHQMK---DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEET----TTTEEEEEEECCSS---SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEC----CCCcEEEEEECCCC---CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 6663 23566677775511 233444555 577776666799999999774 55665
No 55
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=89.09 E-value=9.6 Score=34.31 Aligned_cols=104 Identities=8% Similarity=0.055 Sum_probs=62.0
Q ss_pred eEEEEEECCCceeeeec----CCCCCCCCCCccceeEEEEe-CCeEEEEEeeC-CCCCCCCCCEEEEEEEeecCCCcceE
Q 048458 248 DIIVSFDFGDETFRYRK----LPDCLYNTDHIHRERSIGIL-EKSIALFVSCH-TEDNTAGLGICSVYVMKENIEVEHWI 321 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~----~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~-~~~~~~~~~~i~iW~l~~~~~~~~W~ 321 (386)
+.|..||+.+..+..+. .|... .....++.. +|+..++.... . ..+.||.++.. ...+.
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~------~~~~~i~~spdg~~l~v~~~~~~-------~~i~v~~~~~~--~g~~~ 297 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNA------QGSGDIHLSPDGKYLYASNRLKA-------DGVAIFKVDET--NGTLT 297 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCC------CCEEEEEECTTSSEEEEEECSSS-------CEEEEEEECTT--TCCEE
T ss_pred CeEEEEEecCCceEEeEEEecCCCCC------CCcccEEECCCCCEEEEECCCCC-------CEEEEEEEcCC--CCcEE
Confidence 67899998877665442 22221 112233333 67755555544 4 68999999731 24567
Q ss_pred EEEEeecCCCceeEEEEEecCCe-EEEEe-cCCeEEE--EECCCCeEEEee
Q 048458 322 NLFTVDLRAQFAWQYLGFGANDE-VMLRN-DDGELVL--YDHKTQEVVQCE 368 (386)
Q Consensus 322 ~~~~i~~~~~~~~~~~~~~~~g~-i~l~~-~~~~l~~--ydl~~~~~~~v~ 368 (386)
.+..+...... .-++++++|+ +++.. .++.+.+ +|+++++++.+.
T Consensus 298 ~~~~~~~g~~~--~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 298 KVGYQLTGIHP--RNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEEECSSCC--CEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EeeEecCCCCC--ceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 76666652111 4577888886 55554 3344444 788899988775
No 56
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.00 E-value=12 Score=33.21 Aligned_cols=152 Identities=7% Similarity=0.030 Sum_probs=74.8
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
..+.+|+..++.-+..-...... ..-..+.+ +|.+|.-... +........|..+|..+.++..+. ...
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~-~~~~~~~~~l~~~~~~~~~~~~~~--~~~---- 181 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLSTA---YCIDDMVFDSKGGFYFTDFR-GYSTNPLGGVYYVSPDFRTVTPII--QNI---- 181 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSSSC---CCEEEEEECTTSCEEEEECC-CBTTBCCEEEEEECTTSCCEEEEE--EEE----
T ss_pred ceEEEEeCCCCEEEEEEccCccC---CcccceEECCCCCEEEEecc-ccccCCCceEEEEeCCCCEEEEee--cCC----
Confidence 35777887776544221011110 01112233 5776554332 111112367999999876665442 111
Q ss_pred CccceeEEEEe-CCe-EEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEE-EEe--ecCCCceeEEEEEecCCeEEEE
Q 048458 274 HIHRERSIGIL-EKS-IALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINL-FTV--DLRAQFAWQYLGFGANDEVMLR 348 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~-L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~-~~i--~~~~~~~~~~~~~~~~g~i~l~ 348 (386)
.....++.. +|+ |++... .. ..+.+|.++..+ ...... ..+ .......-.-++++++|.+++.
T Consensus 182 --~~~~~i~~~~dg~~l~v~~~-~~-------~~i~~~d~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~ 249 (333)
T 2dg1_A 182 --SVANGIALSTDEKVLWVTET-TA-------NRLHRIALEDDG--VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA 249 (333)
T ss_dssp --SSEEEEEECTTSSEEEEEEG-GG-------TEEEEEEECTTS--SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE
T ss_pred --CcccceEECCCCCEEEEEeC-CC-------CeEEEEEecCCC--cCcccccceEEEecCCCCCCCceEECCCCCEEEE
Confidence 011223332 565 555443 23 467777665322 222211 111 1111111145777788888887
Q ss_pred ec-CCeEEEEECCCCeEEEeee
Q 048458 349 ND-DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 349 ~~-~~~l~~ydl~~~~~~~v~~ 369 (386)
.. ++.+..||++++..+.+..
T Consensus 250 ~~~~~~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 250 MYGQGRVLVFNKRGYPIGQILI 271 (333)
T ss_dssp EETTTEEEEECTTSCEEEEEEC
T ss_pred EcCCCEEEEECCCCCEEEEEEc
Confidence 64 4679999998877777765
No 57
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.92 E-value=11 Score=32.65 Aligned_cols=112 Identities=13% Similarity=0.204 Sum_probs=64.9
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+|..... . ..|..||...+....+..+... ..-..++.. +|+|++..... ..+.+
T Consensus 131 ~g~l~v~~~~-~------~~i~~~~~~g~~~~~~~~~~~~------~~p~~i~~~~~g~l~v~~~~~--------~~i~~ 189 (286)
T 1q7f_A 131 KGRIIVVECK-V------MRVIIFDQNGNVLHKFGCSKHL------EFPNGVVVNDKQEIFISDNRA--------HCVKV 189 (286)
T ss_dssp TSCEEEEETT-T------TEEEEECTTSCEEEEEECTTTC------SSEEEEEECSSSEEEEEEGGG--------TEEEE
T ss_pred CCCEEEEECC-C------CEEEEEcCCCCEEEEeCCCCcc------CCcEEEEECCCCCEEEEECCC--------CEEEE
Confidence 5776554322 1 6899999887776666543322 122334444 58876655433 47777
Q ss_pred EEEeecCCCcceEEEEEeecCCCcee-EEEEEecCCeEEEEec-CC-eEEEEECCCCeEEEeee
Q 048458 309 YVMKENIEVEHWINLFTVDLRAQFAW-QYLGFGANDEVMLRND-DG-ELVLYDHKTQEVVQCES 369 (386)
Q Consensus 309 W~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~~g~i~l~~~-~~-~l~~ydl~~~~~~~v~~ 369 (386)
|..+ ... +.++........ .-++++++|.+++... +. .+..||.+.+.+..+..
T Consensus 190 ~~~~-----g~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 190 FNYE-----GQY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp EETT-----CCE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred EcCC-----CCE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 7543 122 223332211111 5577778888888765 33 79999998887776654
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=88.84 E-value=11 Score=32.87 Aligned_cols=139 Identities=12% Similarity=0.126 Sum_probs=71.9
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeee-ecCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRY-RKLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~ 271 (386)
...+.+|+.+++..+... .+.... ..-..+.+ +|.....+.. + +.|..+|+.+..... +....
T Consensus 118 d~~i~~~d~~~~~~~~~~-~~~~~~--~~i~~~~~~~~~~~l~~~~~-d------g~v~~~d~~~~~~~~~~~~~~---- 183 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKA-ELTSSA--PACYALAISPDSKVCFSCCS-D------GNIAVWDLHNQTLVRQFQGHT---- 183 (337)
T ss_dssp SSEEEEEECCCC--EEEE-EEECSS--SCEEEEEECTTSSEEEEEET-T------SCEEEEETTTTEEEEEECCCS----
T ss_pred CCcEEEEECCCCCcceee-ecccCC--CceEEEEECCCCCEEEEEeC-C------CcEEEEeCCCCceeeeeeccc----
Confidence 456888998887643332 111000 00011222 4555444443 2 679999998765432 22211
Q ss_pred CCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-Ee
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RN 349 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~ 349 (386)
.....+.-. +|...++.... ..+.+|-++. . .....+.... ...-+++.+++..++ ..
T Consensus 184 ----~~i~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~----~--~~~~~~~~~~--~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 184 ----DGASCIDISNDGTKLWTGGLD--------NTVRSWDLRE----G--RQLQQHDFTS--QIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp ----SCEEEEEECTTSSEEEEEETT--------SEEEEEETTT----T--EEEEEEECSS--CEEEEEECTTSSEEEEEE
T ss_pred ----CceEEEEECCCCCEEEEEecC--------CcEEEEECCC----C--ceEeeecCCC--ceEEEEECCCCCEEEEEc
Confidence 122223332 56655555433 5899998764 1 2233333322 124566677775444 45
Q ss_pred cCCeEEEEECCCCeEEEe
Q 048458 350 DDGELVLYDHKTQEVVQC 367 (386)
Q Consensus 350 ~~~~l~~ydl~~~~~~~v 367 (386)
.++.+..||+++++...+
T Consensus 244 ~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp TTSCEEEEETTSSCEEEE
T ss_pred CCCcEEEEECCCCCeEEE
Confidence 567799999998876554
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=88.45 E-value=15 Score=33.67 Aligned_cols=102 Identities=6% Similarity=0.007 Sum_probs=57.1
Q ss_pred eEEEEEECCCcee--eeecCCCCCCCCCCccceeEEE-EeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceE-EE
Q 048458 248 DIIVSFDFGDETF--RYRKLPDCLYNTDHIHRERSIG-ILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWI-NL 323 (386)
Q Consensus 248 ~~il~fD~~~~~~--~~i~~P~~~~~~~~~~~~~~L~-~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~-~~ 323 (386)
+.|..+|+.+..- ....++... ....+. .-+|+..++.+..+ ..+.+|.++.. +.+. .+
T Consensus 245 ~~i~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~g~~d-------g~i~i~d~~~~---~~~~~~l 307 (402)
T 2aq5_A 245 RQVALWDTKHLEEPLSLQELDTSS-------GVLLPFFDPDTNIVYLCGKGD-------SSIRYFEITSE---APFLHYL 307 (402)
T ss_dssp EEEEEEETTBCSSCSEEEECCCCS-------SCEEEEEETTTTEEEEEETTC-------SCEEEEEECSS---TTCEEEE
T ss_pred ceEEEEcCccccCCceEEeccCCC-------ceeEEEEcCCCCEEEEEEcCC-------CeEEEEEecCC---CcceEee
Confidence 7899999987432 222322211 122222 22566665555444 58999999852 2222 22
Q ss_pred EEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEEeee
Q 048458 324 FTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 324 ~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~v~~ 369 (386)
....... ...-+++.+++.+++. .+..+..|++.+++.+.+.+
T Consensus 308 ~~~~~~~--~v~~~~~sp~~~~~~s-~~~~~~~~~l~~~~~~~i~~ 350 (402)
T 2aq5_A 308 SMFSSKE--SQRGMGYMPKRGLEVN-KCEIARFYKLHERKCEPIAM 350 (402)
T ss_dssp EEECCSS--CCSEEEECCGGGSCGG-GTEEEEEEEEETTEEEEEEE
T ss_pred cccccCC--cccceEEeccccccee-cceeEEEEEcCCCcEEEEEE
Confidence 2222111 1145666666655443 34568999999999888765
No 60
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.61 E-value=16 Score=33.07 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=51.9
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLF 324 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~ 324 (386)
+.|..+|+.+.+.. .+..+... .....+.-. ++++.+... .+ ..+.||-+... ..+.
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~p~~~~~l~sg~-~d-------g~v~~wd~~~~------~~~~ 251 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAPG------YLPTSLAWHPQQSEVFVFGD-EN-------GTVSLVDTKST------SCVL 251 (344)
T ss_dssp SCEEEEETTSSSCEEECC----C------CCEEEEEECSSCTTEEEEEE-TT-------SEEEEEESCC--------CCE
T ss_pred cccccccccccceeeeeecceee------ccceeeeecCCCCcceEEec-cC-------CcEEEEECCCC------cEEE
Confidence 67889999876533 23222211 112222222 455554444 44 58999977631 1222
Q ss_pred EeecCCCceeEEEEEecCC-eEEE-EecCCeEEEEECCCCeEEEe
Q 048458 325 TVDLRAQFAWQYLGFGAND-EVML-RNDDGELVLYDHKTQEVVQC 367 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~g-~i~l-~~~~~~l~~ydl~~~~~~~v 367 (386)
++.... ....-+++.+++ .++. ...++.+.+||+++++....
T Consensus 252 ~~~~h~-~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 252 SSAVHS-QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp EEECCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred EEcCCC-CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 332211 112556677776 4444 34566799999999986554
No 61
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=87.48 E-value=6.6 Score=36.73 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=70.7
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEEECCCceeeee---cC-------CCCCCCCCCccceeEEEEeCCeEEEEEeeCCCC
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR---KL-------PDCLYNTDHIHRERSIGILEKSIALFVSCHTED 298 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i---~~-------P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~ 298 (386)
-+|.++|.+.. +.+.++|+.++.-..+ .+ +...... .....+-..+++|++...... +
T Consensus 236 ~dG~~~~vs~~--------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g---~q~~a~~~~~~~lyV~~~~~~-~ 303 (386)
T 3sjl_D 236 KAGRLVWPTYT--------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG---WQQVAYHRALDRIYLLVDQRD-E 303 (386)
T ss_dssp TTTEEEEEBTT--------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS---SSCEEEETTTTEEEEEEEECC-T
T ss_pred CCCcEEEEeCC--------CEEEEEECCCCcceeecceeccccccccccccCCC---cceeeECCCCCeEEEEecccc-c
Confidence 38899997665 6899999987753332 10 0000000 111222122567777654321 1
Q ss_pred CCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-E-EEEec-CCeEEEEECCCCeE-EEeee
Q 048458 299 NTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-V-MLRND-DGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 299 ~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i-~l~~~-~~~l~~ydl~~~~~-~~v~~ 369 (386)
.+.....=+||++|- +.+..+.+|+..... .-++++.|++ . |..+. ++.+.+||.++++. +.+..
T Consensus 304 ~~hk~~~~~V~viD~----~t~kv~~~i~vg~~~--~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 304 WRHKTASRFVVVLDA----KTGERLAKFEMGHEI--DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp TCTTSCEEEEEEEET----TTCCEEEEEEEEEEE--CEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred cccCCCCCEEEEEEC----CCCeEEEEEECCCCc--ceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC
Confidence 111224567999994 457777777764411 3577788874 4 44444 56799999999985 44554
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.20 E-value=16 Score=32.60 Aligned_cols=139 Identities=9% Similarity=0.090 Sum_probs=74.6
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE--ECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH--LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~ 271 (386)
...+.+|+..++.|+.+. .+.... ..-..+. -+|.+...+.. + +.|..+|+.+..+... .+....
T Consensus 29 d~~v~i~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~~~~~-d------g~i~vwd~~~~~~~~~~~~~~~~-- 96 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVH-ELKEHN--GQVTGVDWAPDSNRIVTCGT-D------RNAYVWTLKGRTWKPTLVILRIN-- 96 (372)
T ss_dssp SSEEEEEEEETTEEEEEE-EEECCS--SCEEEEEEETTTTEEEEEET-T------SCEEEEEEETTEEEEEEECCCCS--
T ss_pred CCEEEEEeCCCCcEEeee-eecCCC--CcccEEEEeCCCCEEEEEcC-C------CeEEEEECCCCeeeeeEEeecCC--
Confidence 456888998888765554 221110 0001121 24555444443 2 6789999988765443 222221
Q ss_pred CCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-Ee
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RN 349 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~ 349 (386)
.....+.-. +|+..++.... ..+.+|.++. ...|.....+.........-+++.+++..++ ..
T Consensus 97 ----~~v~~~~~~~~~~~l~~~~~d--------~~v~i~d~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 97 ----RAARCVRWAPNEKKFAVGSGS--------RVISICYFEQ---ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ----SCEEEEEECTTSSEEEEEETT--------SSEEEEEEET---TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred ----CceeEEEECCCCCEEEEEeCC--------CEEEEEEecC---CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 122222222 56655555433 5899999985 2446555444332222235667777776444 44
Q ss_pred cCCeEEEEECC
Q 048458 350 DDGELVLYDHK 360 (386)
Q Consensus 350 ~~~~l~~ydl~ 360 (386)
.++.+..||++
T Consensus 162 ~dg~i~~~d~~ 172 (372)
T 1k8k_C 162 CDFKCRIFSAY 172 (372)
T ss_dssp TTSCEEEEECC
T ss_pred CCCCEEEEEcc
Confidence 56779999954
No 63
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.94 E-value=17 Score=32.83 Aligned_cols=92 Identities=5% Similarity=-0.047 Sum_probs=47.3
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.+.. .+.... .....+.-. +|.-.++....+ .++.||-++. . .....
T Consensus 249 ~~i~~wd~~~~~~~~~~~~~~--------~~v~~l~~sp~~~~~lasgs~D-------~~i~iwd~~~----~--~~~~~ 307 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAVHS--------QNITGLAYSYHSSPFLASISED-------CTVAVLDADF----S--EVFRD 307 (357)
T ss_dssp SCEEEEESSCGGGCEEECCCS--------SCEEEEEECSSSSCCEEEEETT-------SCEEEECTTS----C--EEEEE
T ss_pred cceeEEECCCCcEeEEEeccc--------eeEEEEEEcCCCCCEEEEEeCC-------CEEEEEECCC----C--cEeEE
Confidence 57889999865432 222111 122223322 454344444455 5899996652 1 22222
Q ss_pred eecCCCceeEEEEEec-CCeEEEE-ecCCeEEEEECCCC
Q 048458 326 VDLRAQFAWQYLGFGA-NDEVMLR-NDDGELVLYDHKTQ 362 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~-~g~i~l~-~~~~~l~~ydl~~~ 362 (386)
+.... ...-+++.+ ++.+++. ..++.+..||+.++
T Consensus 308 ~~H~~--~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 308 LSHRD--FVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CCCSS--CEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCC--CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 22211 115566765 6666554 45677999998654
No 64
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=86.93 E-value=17 Score=32.58 Aligned_cols=152 Identities=9% Similarity=-0.076 Sum_probs=72.5
Q ss_pred cceEEEEEcCCCcee-ecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceee-eecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWR-RIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFR-YRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W~-~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~ 272 (386)
...+.+++..++.-. .++.............-+.-+|.+|..... . ...|.++|+.+.+.. .++.....
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~--~----~~~v~viD~~t~~~~~~i~~g~~p--- 174 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS--Y----QNRILKIDTETDKVVDELTIGIQP--- 174 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT--T----CCEEEEEETTTTEEEEEEECSSCB---
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC--C----CCEEEEEECCCCeEEEEEEcCCCc---
Confidence 346788888876532 222000000000111223356677665421 0 168999999987653 34442211
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCC
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDG 352 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~ 352 (386)
.... ..-+|+++++......+..-....-.|++++.. ..+ ...++.......-.-+++++++..++....
T Consensus 175 ----~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~~--v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 175 ----TSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TFT--VEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp ----CCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TTE--EEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred ----cceE-EcCCCCEEEEECCCccCCccccCCceEEEEECC--CCe--EEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 1111 123688777765331000000001345566531 122 333444322111156788876654444333
Q ss_pred eEEEEECCCCeEE
Q 048458 353 ELVLYDHKTQEVV 365 (386)
Q Consensus 353 ~l~~ydl~~~~~~ 365 (386)
.++.+|++++++.
T Consensus 245 ~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 245 DIWRMPVEADRVP 257 (328)
T ss_dssp SEEEEETTCSSCC
T ss_pred EEEEEECCCCcee
Confidence 7999999998863
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=85.84 E-value=18 Score=31.82 Aligned_cols=96 Identities=10% Similarity=0.083 Sum_probs=53.4
Q ss_pred EEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe-CCe-EEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEE-EE
Q 048458 249 IIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL-EKS-IALFVSCHTEDNTAGLGICSVYVMKENIEVEHWIN-LF 324 (386)
Q Consensus 249 ~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~-~G~-L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~-~~ 324 (386)
.|..+|+.+..... ++.... ...++.. +|+ |++...... ..+.+|.++..+ ..... ..
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~---------~~~~~~spdg~~l~~~~~~~~-------~~i~~~~~~~~g--~~~~~~~~ 170 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYD---------AVGIAISPNGNGLILIDRSSA-------NTVRRFKIDADG--VLFDTGQE 170 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTT---------EEEEEECTTSSCEEEEEETTT-------TEEEEEEECTTC--CEEEEEEE
T ss_pred cEEEEECCCCCeEEEEECCCC---------ccceEECCCCCEEEEEecCCC-------ceEEEEEECCCC--cEeecCCc
Confidence 89999998766533 333211 1223333 565 554444333 339999998532 11111 11
Q ss_pred EeecCCCceeEEEEEecCCe-EEEEec-CCeEEEEECCCCeE
Q 048458 325 TVDLRAQFAWQYLGFGANDE-VMLRND-DGELVLYDHKTQEV 364 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~g~-i~l~~~-~~~l~~ydl~~~~~ 364 (386)
.+.. ...-.-++++++|+ +++... +..+..||+++++.
T Consensus 171 ~~~~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 171 FISG--GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EECS--SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred cccC--CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 2221 11115677888886 666553 56799999998774
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=85.60 E-value=18 Score=31.70 Aligned_cols=107 Identities=7% Similarity=0.067 Sum_probs=59.8
Q ss_pred eEEEEEECC--Cceee---ee-cCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcce
Q 048458 248 DIIVSFDFG--DETFR---YR-KLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHW 320 (386)
Q Consensus 248 ~~il~fD~~--~~~~~---~i-~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W 320 (386)
+.|..+|+. +..+. .+ .+|...... .....+.-. +|+..++....+ ..+.+|.++.. .+.+
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~i~~s~dg~~l~v~~~~~-------~~i~v~d~~~~--~~~~ 267 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMPENFSDT---RWAADIHITPDGRHLYACDRTA-------SLITVFSVSED--GSVL 267 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSCTTCCSC---CCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTT--SCCE
T ss_pred CEEEEEEecCCCCcEEEEeeccccCcccccc---CCccceEECCCCCEEEEEecCC-------CEEEEEEEcCC--CCce
Confidence 678899984 34332 22 244432111 111123333 465444444344 68999999842 2456
Q ss_pred EEEEEeecCCCceeEEEEEecCCe-EEEEec-CCeEEEE--ECCCCeEEEee
Q 048458 321 INLFTVDLRAQFAWQYLGFGANDE-VMLRND-DGELVLY--DHKTQEVVQCE 368 (386)
Q Consensus 321 ~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~-~~~l~~y--dl~~~~~~~v~ 368 (386)
..+..++..... .-++++++|. +++... ++.+.+| |.++++++.+.
T Consensus 268 ~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 268 SKEGFQPTETQP--RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EEEEEEECSSSC--CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEeeeecCCCcc--ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 776666644321 4567778886 555543 4556666 78888887664
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.53 E-value=18 Score=32.52 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=32.2
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEE
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~ 366 (386)
..+.||.+.... .....+.++.... ....-+++.+++.+++...++.++.|+...+.++.
T Consensus 227 ~~i~iwd~~~~~--~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (377)
T 3dwl_C 227 SSVTIAYPSAPE--QPPRALITVKLSQ-LPLRSLLWANESAIVAAGYNYSPILLQGNESGWAH 286 (377)
T ss_dssp TEEC-CEECSTT--SCEEECCCEECSS-SCEEEEEEEETTEEEEEESSSSEEEECCCC---CC
T ss_pred CcEEEEECCCCC--CcceeeEeecCCC-CceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEE
Confidence 589999988522 2122222232221 11255677778887776666667788887655433
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=85.27 E-value=22 Score=32.42 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=37.5
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEE-ecCCeEEEEECCCC
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLR-NDDGELVLYDHKTQ 362 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~-~~~~~l~~ydl~~~ 362 (386)
+|++.+++.. + ..+.+|-+... .....+.........-+++.+++. +++. ..++.+..||++++
T Consensus 258 ~~~~l~~~~~-d-------g~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 258 YGKYVIAGHV-S-------GVITVHNVFSK------EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp TTEEEEEEET-T-------SCEEEEETTTC------CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEcC-C-------CeEEEEECCCC------ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 4665555443 3 57999987641 122233222122225667777775 5544 45678999999886
Q ss_pred e
Q 048458 363 E 363 (386)
Q Consensus 363 ~ 363 (386)
+
T Consensus 324 ~ 324 (420)
T 3vl1_A 324 E 324 (420)
T ss_dssp T
T ss_pred c
Confidence 4
No 69
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=85.08 E-value=17 Score=31.12 Aligned_cols=109 Identities=7% Similarity=0.008 Sum_probs=60.6
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+|..... . ..|..+|. +.++..+..|... ..-..++.. +|+|++..... ..+.+
T Consensus 151 ~g~l~v~~~~-~------~~i~~~~~-~g~~~~~~~~~~~------~~~~~i~~~~~g~l~v~~~~~--------~~i~~ 208 (299)
T 2z2n_A 151 DNALWFTENQ-N------NAIGRITE-SGDITEFKIPTPA------SGPVGITKGNDDALWFVEIIG--------NKIGR 208 (299)
T ss_dssp TSCEEEEETT-T------TEEEEECT-TCCEEEEECSSTT------CCEEEEEECTTSSEEEEETTT--------TEEEE
T ss_pred CCCEEEEeCC-C------CEEEEEcC-CCcEEEeeCCCCC------CcceeEEECCCCCEEEEccCC--------ceEEE
Confidence 5777654332 1 68999999 7777666555432 122234444 58876655432 35544
Q ss_pred EEEeecCCCcceEEEEEeecCCCce-eEEEEEecCCeEEEEe-cCCeEEEEECCCCeEEEeee
Q 048458 309 YVMKENIEVEHWINLFTVDLRAQFA-WQYLGFGANDEVMLRN-DDGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 309 W~l~~~~~~~~W~~~~~i~~~~~~~-~~~~~~~~~g~i~l~~-~~~~l~~ydl~~~~~~~v~~ 369 (386)
|.. . ..... +....... ..-++++++|.+++.. ....+..||+ +++++.+..
T Consensus 209 ~~~--~---g~~~~---~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~ 262 (299)
T 2z2n_A 209 ITT--S---GEITE---FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPI 262 (299)
T ss_dssp ECT--T---CCEEE---EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEEC
T ss_pred ECC--C---CcEEE---EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeC
Confidence 433 1 22322 22221111 1456677788888876 3467999999 566666644
No 70
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=85.07 E-value=17 Score=30.88 Aligned_cols=191 Identities=8% Similarity=0.091 Sum_probs=95.3
Q ss_pred EEeeecccEEEeecCCCCccccEEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecC
Q 048458 92 IVSSCSGLVCLLLNTFHSCHFPMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHR 171 (386)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~ 171 (386)
+.-..+|-+.+. +.... ++++|+.++....++..... ... ++.+|+.
T Consensus 72 i~~~~~g~l~v~-~~~~~----i~~~d~~~~~~~~~~~~~~~---------------------------~p~-~i~~~~~ 118 (270)
T 1rwi_B 72 LAVDGAGTVYVT-DFNNR----VVTLAAGSNNQTVLPFDGLN---------------------------YPE-GLAVDTQ 118 (270)
T ss_dssp EEECTTCCEEEE-ETTTE----EEEECTTCSCCEECCCCSCS---------------------------SEE-EEEECTT
T ss_pred eEECCCCCEEEE-cCCCE----EEEEeCCCceEeeeecCCcC---------------------------CCc-ceEECCC
Confidence 333446666655 33455 88999988776655433212 113 6666764
Q ss_pred CCCeEEEEEEEeeeccccccccccceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceE
Q 048458 172 TSDFKILLIVHAREVASEQFRREFSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDI 249 (386)
Q Consensus 172 ~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~ 249 (386)
. . +. +.. .....+.+|+.++....... ... .....++.+ +|.+|+.... . ..
T Consensus 119 g-~--l~-v~~----------~~~~~i~~~~~~~~~~~~~~-~~~----~~~p~~i~~~~~g~l~v~~~~-~------~~ 172 (270)
T 1rwi_B 119 G-A--VY-VAD----------RGNNRVVKLAAGSKTQTVLP-FTG----LNDPDGVAVDNSGNVYVTDTD-N------NR 172 (270)
T ss_dssp C-C--EE-EEE----------GGGTEEEEECTTCCSCEECC-CCS----CCSCCCEEECTTCCEEEEEGG-G------TE
T ss_pred C-C--EE-EEE----------CCCCEEEEEECCCceeEeec-ccc----CCCceeEEEeCCCCEEEEECC-C------CE
Confidence 3 2 22 222 12335666665554332222 100 011123433 5786665443 2 68
Q ss_pred EEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeec
Q 048458 250 IVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDL 328 (386)
Q Consensus 250 il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~ 328 (386)
|..||..+.......... . ..-..++.. +|.|++..... ..+.+|..+. ..... +..
T Consensus 173 i~~~~~~~~~~~~~~~~~-~------~~p~~i~~d~~g~l~v~~~~~--------~~v~~~~~~~---~~~~~----~~~ 230 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTD-I------TAPWGIAVDEAGTVYVTEHNT--------NQVVKLLAGS---TTSTV----LPF 230 (270)
T ss_dssp EEEECTTTCCEEECCCSS-C------CSEEEEEECTTCCEEEEETTT--------SCEEEECTTC---SCCEE----CCC
T ss_pred EEEEecCCCceEeecccC-C------CCceEEEECCCCCEEEEECCC--------CcEEEEcCCC---Cccee----ecc
Confidence 999999876654432211 1 112234444 56777665533 3555544332 11111 111
Q ss_pred CCCceeEEEEEecCCeEEEEec-CCeEEEEECCCCe
Q 048458 329 RAQFAWQYLGFGANDEVMLRND-DGELVLYDHKTQE 363 (386)
Q Consensus 329 ~~~~~~~~~~~~~~g~i~l~~~-~~~l~~ydl~~~~ 363 (386)
.....-.-++++++|.+++... ++.+..|++..++
T Consensus 231 ~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 1111114566777788887754 5679999887654
No 71
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.06 E-value=17 Score=30.87 Aligned_cols=143 Identities=14% Similarity=0.042 Sum_probs=69.5
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCe-EEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGA-VHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
...+.+++..++.-+.+. ..... ......-+|. +++.... + ....|..+|..+.....+.....
T Consensus 109 ~~~l~~~~~~~~~~~~~~-~~~~~----~~~~~spdg~~l~~~~~~-~----~~~~l~~~~~~~~~~~~~~~~~~----- 173 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPRLMT-KNLPS----YWHGWSPDGKSFTYCGIR-D----QVFDIYSMDIDSGVETRLTHGEG----- 173 (297)
T ss_dssp SCEEEEEETTCCCCEECC-SSSSE----EEEEECTTSSEEEEEEEE-T----TEEEEEEEETTTCCEEECCCSSS-----
T ss_pred cceEEEEECCCCceEEee-cCCCc----cceEECCCCCEEEEEECC-C----CceEEEEEECCCCcceEcccCCC-----
Confidence 456677777666544443 11110 0001112554 4434433 2 11356777777665544422111
Q ss_pred CccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEecC
Q 048458 274 HIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRNDD 351 (386)
Q Consensus 274 ~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~~ 351 (386)
....+.- -+|+..++..... ..+.||.++..+ ... ..+.... .....+++.++|+ |++...+
T Consensus 174 ---~~~~~~~s~dg~~l~~~~~~~-------~~~~i~~~~~~~--~~~---~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 174 ---RNDGPDYSPDGRWIYFNSSRT-------GQMQIWRVRVDG--SSV---ERITDSA-YGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp ---CEEEEEECTTSSEEEEEECTT-------SSCEEEEEETTS--SCE---EECCCCS-EEEEEEEECTTSSEEEEEEEE
T ss_pred ---ccccceECCCCCEEEEEecCC-------CCccEEEECCCC--CCc---EEEecCC-cccCCeEECCCCCEEEEEEcC
Confidence 1122222 2676555555434 478899988322 221 1222111 1124566777775 4444322
Q ss_pred -----------CeEEEEECCCCeEEEee
Q 048458 352 -----------GELVLYDHKTQEVVQCE 368 (386)
Q Consensus 352 -----------~~l~~ydl~~~~~~~v~ 368 (386)
..++.||+++++.+.+.
T Consensus 238 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 238 ADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp TTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCCCcccccCceEEEEEecCCCCceeee
Confidence 35999999998865543
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=85.02 E-value=20 Score=31.81 Aligned_cols=74 Identities=11% Similarity=0.235 Sum_probs=47.2
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEec-CCeEEEE--ECC
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRND-DGELVLY--DHK 360 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~-~~~l~~y--dl~ 360 (386)
+|+..++..... ..+.+|.++.. ..+..+.+++...... .-++++++|+ +++... ++.+..| |.+
T Consensus 250 dG~~l~v~~~~~-------~~v~v~~~~~~---g~~~~~~~~~~~~~~~-~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 250 DGHFLYVSNRGY-------NTLAVFAVTAD---GHLTLIQQISTEGDFP-RDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp TSCEEEEEEETT-------TEEEEEEECGG---GCEEEEEEEECSSSCC-CEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEeCCC-------CEEEEEEECCC---CcEEEeEEEecCCCCc-CeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 677554444444 68999999852 3566666666432111 4677888886 555544 3556666 888
Q ss_pred CCeEEEeee
Q 048458 361 TQEVVQCES 369 (386)
Q Consensus 361 ~~~~~~v~~ 369 (386)
+++++.+.-
T Consensus 319 tg~l~~~~~ 327 (347)
T 3hfq_A 319 SGKLSLLQK 327 (347)
T ss_dssp TCCEEEEEE
T ss_pred CCeEEeccc
Confidence 899887653
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=84.78 E-value=23 Score=32.29 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=74.0
Q ss_pred cceEEEEEcCCCceeecC--CCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeec-CCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQ--PNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRK-LPDCL 269 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~--~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~-~P~~~ 269 (386)
...+.+|+.+++.....- ..... .-..+.+ +|.....+.. + +.|..+|+.+....... .....
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~-d------~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPD-----TIYSVDWSRDGALICTSCR-D------KRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCS-----CEEEEEECTTSSCEEEEET-T------SEEEEEETTTTEEEEEEECSSCS
T ss_pred CCEEEEEECCCCCccEEEecCCCCC-----ceEEEEECCCCCEEEEEec-C------CcEEEEeCCCCceeeeeccCCCC
Confidence 446889998876542111 01110 0012222 5655554443 2 78999999876543321 11111
Q ss_pred CCCCCccceeEEE-EeCCeEEEEEe--eCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEE
Q 048458 270 YNTDHIHRERSIG-ILEKSIALFVS--CHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVM 346 (386)
Q Consensus 270 ~~~~~~~~~~~L~-~~~G~L~lv~~--~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~ 346 (386)
.....+. .-+|++.+++. ..+ ..+.+|-+.... .=.....+.... ....+++.+++..+
T Consensus 221 ------~~~~~~~~~~~~~~l~~g~~~~~d-------~~i~iwd~~~~~---~~~~~~~~~~~~--~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 221 ------TRPVHAVFVSEGKILTTGFSRMSE-------RQVALWDTKHLE---EPLSLQELDTSS--GVLLPFFDPDTNIV 282 (402)
T ss_dssp ------SSCCEEEECSTTEEEEEEECTTCC-------EEEEEEETTBCS---SCSEEEECCCCS--SCEEEEEETTTTEE
T ss_pred ------CcceEEEEcCCCcEEEEeccCCCC-------ceEEEEcCcccc---CCceEEeccCCC--ceeEEEEcCCCCEE
Confidence 1112222 23677666653 233 689999887522 111122222222 12556777777654
Q ss_pred -EEe-cCCeEEEEECCCCe--EEEee
Q 048458 347 -LRN-DDGELVLYDHKTQE--VVQCE 368 (386)
Q Consensus 347 -l~~-~~~~l~~ydl~~~~--~~~v~ 368 (386)
+.. .++.+.+||+++++ +..+.
T Consensus 283 ~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EEEEcCCCeEEEEEecCCCcceEeec
Confidence 444 36679999999887 55543
No 74
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.75 E-value=20 Score=31.43 Aligned_cols=107 Identities=10% Similarity=0.037 Sum_probs=60.2
Q ss_pred eEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCC
Q 048458 226 TVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAG 302 (386)
Q Consensus 226 ~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~ 302 (386)
+++. +|.+||.... . ..|..+|+.+.....+..|... ..++.. +|+|.+.. .
T Consensus 18 p~w~~~~~~l~~~d~~-~------~~i~~~d~~~~~~~~~~~~~~~---------~~i~~~~dG~l~v~~---~------ 72 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIP-A------KKVCRWDSFTKQVQRVTMDAPV---------SSVALRQSGGYVATI---G------ 72 (297)
T ss_dssp EEEETTTTEEEEEETT-T------TEEEEEETTTCCEEEEECSSCE---------EEEEEBTTSSEEEEE---T------
T ss_pred CeEECCCCEEEEEECC-C------CEEEEEECCCCcEEEEeCCCce---------EEEEECCCCCEEEEE---C------
Confidence 4444 4789998755 2 6899999998877766655321 223333 67755443 2
Q ss_pred CCEEEEEEEeecCCCcceEEEEEeecCCC-ceeEEEEEecCCeEEEEec------------CCeEEEEECCCC
Q 048458 303 LGICSVYVMKENIEVEHWINLFTVDLRAQ-FAWQYLGFGANDEVMLRND------------DGELVLYDHKTQ 362 (386)
Q Consensus 303 ~~~i~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~~g~i~l~~~------------~~~l~~ydl~~~ 362 (386)
..+.+|..+ ..++..+........ ....-++++++|.+++... ...++.+|.+.+
T Consensus 73 -~~l~~~d~~----~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 140 (297)
T 3g4e_A 73 -TKFCALNWK----EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH 140 (297)
T ss_dssp -TEEEEEETT----TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC
T ss_pred -CeEEEEECC----CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC
Confidence 344444333 234544443322111 1114466777888887541 135888887644
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=84.34 E-value=23 Score=32.00 Aligned_cols=98 Identities=13% Similarity=0.058 Sum_probs=50.4
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEE
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLF 324 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~ 324 (386)
+.|..+|+.+.+... +...... .....+.-. ++.+.++.. .+ ..+.+|-+... ....
T Consensus 204 g~v~~wd~~~~~~~~~~~~~~~~------~~v~~v~~sp~~~~~la~g~-~d-------~~i~~wd~~~~------~~~~ 263 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFCASD------TIPTSVTWHPEKDDTFACGD-ET-------GNVSLVNIKNP------DSAQ 263 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCTTCC------SCEEEEEECTTSTTEEEEEE-SS-------SCEEEEESSCG------GGCE
T ss_pred CceEEEECCCCceeeeeeecccc------ccccchhhhhcccceEEEee-cc-------cceeEEECCCC------cEeE
Confidence 578889987754322 1221111 112222222 355544444 44 58999987642 1112
Q ss_pred EeecCCCceeEEEEEecCC-eEEE-EecCCeEEEEECCCCeEEE
Q 048458 325 TVDLRAQFAWQYLGFGAND-EVML-RNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~g-~i~l-~~~~~~l~~ydl~~~~~~~ 366 (386)
++.... ....-+++.+++ .++. ...++.+.+||+++++...
T Consensus 264 ~~~~~~-~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 264 TSAVHS-QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp EECCCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred EEeccc-eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 222111 112456666665 4444 3456679999999987643
No 76
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.86 E-value=9.4 Score=35.76 Aligned_cols=112 Identities=12% Similarity=0.069 Sum_probs=62.4
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
-+|.+||.... . ..|..+|+.+.....+..... ... ++.. +|...++..... . ..
T Consensus 140 ~~g~lyv~d~~-~------~~I~~id~~~g~~~~~~~~~~-------~~~--ia~~~~g~~l~~~d~~~-------~-~~ 195 (409)
T 3hrp_A 140 GNNTVLAYQRD-D------PRVRLISVDDNKVTTVHPGFK-------GGK--PAVTKDKQRVYSIGWEG-------T-HT 195 (409)
T ss_dssp STTEEEEEETT-T------TEEEEEETTTTEEEEEEETCC-------BCB--CEECTTSSEEEEEBSST-------T-CE
T ss_pred CCCCEEEEecC-C------CcEEEEECCCCEEEEeeccCC-------CCc--eeEecCCCcEEEEecCC-------C-ce
Confidence 36899887654 2 689999999877766532211 111 2322 344333333222 1 16
Q ss_pred EEEEeecCCCcceE--EEEEeecCCCceeEEEEEec-CCeEEEEecCCeEEEEECCCCeEEEe
Q 048458 308 VYVMKENIEVEHWI--NLFTVDLRAQFAWQYLGFGA-NDEVMLRNDDGELVLYDHKTQEVVQC 367 (386)
Q Consensus 308 iW~l~~~~~~~~W~--~~~~i~~~~~~~~~~~~~~~-~g~i~l~~~~~~l~~ydl~~~~~~~v 367 (386)
||+++.. ..|. ....+.........-+++++ +|.||+....+.++.||+++++...+
T Consensus 196 I~~~d~~---~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 196 VYVYMKA---SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEEEGG---GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred EEEEEcC---CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 7777742 2343 22111110111114567777 67888865556799999998887665
No 77
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=83.54 E-value=22 Score=31.01 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=53.8
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+.+.... ++... .....+.-. +|++.+.... + ..+.+|-+.. . .....+
T Consensus 129 ~~i~iwd~~~~~~~~~-~~~~~------~~v~~~~~~~~~~~l~~~~~-d-------~~i~~wd~~~----~--~~~~~~ 187 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKT-LPAHS------DPVSAVHFNRDGSLIVSSSY-D-------GLCRIWDTAS----G--QCLKTL 187 (312)
T ss_dssp SCEEEEETTTCCEEEE-ECCCS------SCEEEEEECTTSSEEEEEET-T-------SCEEEEETTT----C--CEEEEE
T ss_pred CcEEEEECCCCEEEEE-ecCCC------CcEEEEEEcCCCCEEEEEeC-C-------CcEEEEECCC----C--ceeeEE
Confidence 6789999987653221 11111 112222222 5666555544 3 5899998763 1 122222
Q ss_pred ecCCCceeEEEEEecCCeEEE-EecCCeEEEEECCCCeEEE
Q 048458 327 DLRAQFAWQYLGFGANDEVML-RNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~~~~ 366 (386)
..........+++.+++..++ ...++.+..||+++++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 222222225577778776544 4456789999999887543
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.37 E-value=21 Score=30.71 Aligned_cols=110 Identities=11% Similarity=0.065 Sum_probs=57.3
Q ss_pred eEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCE
Q 048458 226 TVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGI 305 (386)
Q Consensus 226 ~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~ 305 (386)
.+..+|.....+.. + +.|..+|... ....+...... .........++.+.++.... ..
T Consensus 109 ~~~~~~~~l~~~~~-d------~~i~~~d~~~-~~~~~~~~~~~------v~~~~~~~~~~~~l~~~~~d--------~~ 166 (313)
T 3odt_A 109 SLSFQDGVVISGSW-D------KTAKVWKEGS-LVYNLQAHNAS------VWDAKVVSFSENKFLTASAD--------KT 166 (313)
T ss_dssp EEEEETTEEEEEET-T------SEEEEEETTE-EEEEEECCSSC------EEEEEEEETTTTEEEEEETT--------SC
T ss_pred EEEecCCEEEEEeC-C------CCEEEEcCCc-EEEecccCCCc------eeEEEEccCCCCEEEEEECC--------CC
Confidence 34456665554444 2 6899999332 22223221111 12222223256665555544 48
Q ss_pred EEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEE
Q 048458 306 CSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVV 365 (386)
Q Consensus 306 i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~ 365 (386)
+.+|.... ....+..........+++.+++.++....++.+..||+++++..
T Consensus 167 i~i~d~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 167 IKLWQNDK--------VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp EEEEETTE--------EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEecCc--------eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 89996221 12222221222225666777777666666778999999877643
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.24 E-value=23 Score=30.99 Aligned_cols=105 Identities=10% Similarity=0.075 Sum_probs=57.4
Q ss_pred eEEEEEECCC-ceee-----eecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcce
Q 048458 248 DIIVSFDFGD-ETFR-----YRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHW 320 (386)
Q Consensus 248 ~~il~fD~~~-~~~~-----~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W 320 (386)
+.|..||+.+ .... .+..+... .-..+... +|+..++..... ..+.+|.++.. ...+
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~pdg~~l~~~~~~~-------~~i~~~~~~~~--~g~~ 214 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGA-------GPRHMVFHPNEQYAYCVNELN-------SSVDVWELKDP--HGNI 214 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTC-------CEEEEEECTTSSEEEEEETTT-------TEEEEEESSCT--TSCC
T ss_pred CEEEEEEecCCCceeeecccccccCCCC-------CcceEEECCCCCEEEEEeCCC-------CEEEEEEecCC--CCcE
Confidence 6799999987 5554 23333221 11122222 566444444333 68999998742 2345
Q ss_pred EEEEEeecCC-C---ce-eEEEEEecCCe-EEEEe-cCCeEEEEECC--CCeEEEee
Q 048458 321 INLFTVDLRA-Q---FA-WQYLGFGANDE-VMLRN-DDGELVLYDHK--TQEVVQCE 368 (386)
Q Consensus 321 ~~~~~i~~~~-~---~~-~~~~~~~~~g~-i~l~~-~~~~l~~ydl~--~~~~~~v~ 368 (386)
.....+.... . .. ..-+++.++|+ +++.. .++.+..||++ +++.+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 215 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 5444443221 1 11 14577788885 55454 35679999988 55555553
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.87 E-value=42 Score=33.79 Aligned_cols=95 Identities=12% Similarity=0.149 Sum_probs=50.7
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe---CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEE
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL---EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINL 323 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~---~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~ 323 (386)
+.|..+|+.+..... +..+... ....+.-. +|.+.+++.. + ..+.+|.++. ....
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~l~~~~~-d-------g~i~~~d~~~------~~~~ 221 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQER-------GVNYVDYYPLPDKPYMITASD-D-------LTIKIWDYQT------KSCV 221 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTT-------CCCEEEECCSTTCCEEEEECT-T-------SEEEEEETTT------TEEE
T ss_pred CeEEEEECCCCcceeEEecCCCC-------CEEEEEEEECCCCCEEEEEeC-C-------CEEEEEECCC------CcEE
Confidence 689999987544322 2211111 11122222 5555555443 3 5899997763 1233
Q ss_pred EEeecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeE
Q 048458 324 FTVDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEV 364 (386)
Q Consensus 324 ~~i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~ 364 (386)
.++.... .....+++.+++.+++. ..++.+..||+.+++.
T Consensus 222 ~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 222 ATLEGHM-SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp EEEECCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred EEEcCCC-CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 3333221 12256667777765444 4467799999988664
No 81
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=82.75 E-value=17 Score=32.09 Aligned_cols=115 Identities=10% Similarity=0.161 Sum_probs=62.2
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+||.... + +.|..+|+.+.++..+..+.. ..-..++.. +|+|.+....... ..-.|
T Consensus 55 ~g~l~~~~~~-~------~~i~~~d~~~~~~~~~~~~~~-------~~~~~i~~~~dg~l~v~~~~~~~------~~~~i 114 (333)
T 2dg1_A 55 QGQLFLLDVF-E------GNIFKINPETKEIKRPFVSHK-------ANPAAIKIHKDGRLFVCYLGDFK------STGGI 114 (333)
T ss_dssp TSCEEEEETT-T------CEEEEECTTTCCEEEEEECSS-------SSEEEEEECTTSCEEEEECTTSS------SCCEE
T ss_pred CCCEEEEECC-C------CEEEEEeCCCCcEEEEeeCCC-------CCcceEEECCCCcEEEEeCCCCC------CCceE
Confidence 6888877544 2 689999999887766532111 122234443 6887776543310 11235
Q ss_pred EEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecC-------CeEEEEECCCCeEEEe
Q 048458 309 YVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDD-------GELVLYDHKTQEVVQC 367 (386)
Q Consensus 309 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~-------~~l~~ydl~~~~~~~v 367 (386)
++++..+ ..-..... .........-++++++|.+++.... ..++.+|+++++++.+
T Consensus 115 ~~~d~~~--~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 115 FAATENG--DNLQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EEECTTS--CSCEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEeCCC--CEEEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 5555321 11111111 0111111145677778888887542 4699999988776554
No 82
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=82.61 E-value=31 Score=32.02 Aligned_cols=144 Identities=8% Similarity=0.041 Sum_probs=72.5
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE-ECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH-LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
...+.+++..++..+.+. ...... ....+ -||.....+.. .. ....|..+|+.+.....+....
T Consensus 246 ~~~i~~~d~~~~~~~~l~-~~~~~~----~~~~~spdg~~l~~~s~-~~---g~~~i~~~d~~~~~~~~l~~~~------ 310 (415)
T 2hqs_A 246 SLNLYVMDLASGQIRQVT-DGRSNN----TEPTWFPDSQNLAFTSD-QA---GRPQVYKVNINGGAPQRITWEG------ 310 (415)
T ss_dssp SCEEEEEETTTCCEEECC-CCSSCE----EEEEECTTSSEEEEEEC-TT---SSCEEEEEETTSSCCEECCCSS------
T ss_pred CceEEEEECCCCCEEeCc-CCCCcc----cceEECCCCCEEEEEEC-CC---CCcEEEEEECCCCCEEEEecCC------
Confidence 456888898887765554 211110 01111 25653333322 11 1247889999887654432211
Q ss_pred CccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEecC
Q 048458 274 HIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRNDD 351 (386)
Q Consensus 274 ~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~~ 351 (386)
.....+.- -+|+..++..... +...+.+|.++. .... .+.... ....+++.++|. |++...+
T Consensus 311 --~~~~~~~~spdG~~l~~~~~~~-----g~~~i~~~d~~~----~~~~---~l~~~~--~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 311 --SQNQDADVSSDGKFMVMVSSNG-----GQQHIAKQDLAT----GGVQ---VLSSTF--LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp --SEEEEEEECTTSSEEEEEEECS-----SCEEEEEEETTT----CCEE---ECCCSS--SCEEEEECTTSSEEEEEEEE
T ss_pred --CcccCeEECCCCCEEEEEECcC-----CceEEEEEECCC----CCEE---EecCCC--CcCCeEEcCCCCEEEEEEcC
Confidence 11112222 2666555544432 113455555442 2222 222111 225667778886 4444433
Q ss_pred C---eEEEEECCCCeEEEeee
Q 048458 352 G---ELVLYDHKTQEVVQCES 369 (386)
Q Consensus 352 ~---~l~~ydl~~~~~~~v~~ 369 (386)
. .++.+|++++..+.+.-
T Consensus 375 ~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 375 GMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp TTEEEEEEEETTSCCEEECCC
T ss_pred CCccEEEEEECCCCcEEEeeC
Confidence 3 69999999998887754
No 83
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=82.31 E-value=23 Score=30.35 Aligned_cols=110 Identities=7% Similarity=0.046 Sum_probs=59.8
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+|+.... . ..|..||. +..+..+..|.... .-..++.. +|.|++..... ..+.
T Consensus 156 ~g~l~v~~~~-~------~~i~~~~~-~g~~~~~~~~~~~~------~~~~i~~d~~g~l~v~~~~~--------~~i~- 212 (300)
T 2qc5_A 156 DNALWFTENQ-N------NSIGRITN-TGKLEEYPLPTNAA------APVGITSGNDGALWFVEIMG--------NKIG- 212 (300)
T ss_dssp TSSEEEEETT-T------TEEEEECT-TCCEEEEECSSTTC------CEEEEEECTTSSEEEEETTT--------TEEE-
T ss_pred CCCEEEEecC-C------CeEEEECC-CCcEEEeeCCCCCC------CcceEEECCCCCEEEEccCC--------CEEE-
Confidence 5776554332 1 68999999 55666666554331 22334444 67877765433 2444
Q ss_pred EEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec-CCeEEEEECCCCeEEEeee
Q 048458 309 YVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 309 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-~~~l~~ydl~~~~~~~v~~ 369 (386)
+++.. ..... ..++...... .-++++++|.+++... ...+..||+ ++++.....
T Consensus 213 -~~~~~---g~~~~-~~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 267 (300)
T 2qc5_A 213 -RITTT---GEISE-YDIPTPNARP-HAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQL 267 (300)
T ss_dssp -EECTT---CCEEE-EECSSTTCCE-EEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEEC
T ss_pred -EEcCC---CcEEE-EECCCCCCCc-eEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEEC
Confidence 44421 23332 1222111111 4566777788888874 367999999 456655544
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=81.94 E-value=29 Score=31.31 Aligned_cols=98 Identities=8% Similarity=-0.095 Sum_probs=52.4
Q ss_pred eEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCC---------
Q 048458 248 DIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIE--------- 316 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~--------- 316 (386)
+.|..+|+.+...... .... .....+.-. +|++.++... + ..+.+|.++....
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~--------~~i~~~~~s~~~~~l~~~~~-d-------g~i~i~~~~~~~~~~~~~~~~~ 373 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDG--------VPIFAGRISQDGQKYAVAFM-D-------GQVNVYDLKKLNSKSRSLYGNR 373 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTT--------CCEEEEEECTTSSEEEEEET-T-------SCEEEEECHHHHC---------
T ss_pred CcEEEEECCCCcEeEecccCC--------ccEEEEEEcCCCCEEEEEEC-C-------CeEEEEECCCCccceeeeeccc
Confidence 7899999987654332 2211 112222222 5665555543 3 5899998874210
Q ss_pred Cc-----ceEEEEEeecCCCc-eeEEEEEecCCeEE-EEecCCeEEEEECCC
Q 048458 317 VE-----HWINLFTVDLRAQF-AWQYLGFGANDEVM-LRNDDGELVLYDHKT 361 (386)
Q Consensus 317 ~~-----~W~~~~~i~~~~~~-~~~~~~~~~~g~i~-l~~~~~~l~~ydl~~ 361 (386)
.. .+..+..+...... ...-+++.+++..+ ....++.+.+||++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 374 DGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp -----CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred ccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 00 11133444332211 33667777777644 455567799999863
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=81.93 E-value=27 Score=30.82 Aligned_cols=30 Identities=13% Similarity=0.320 Sum_probs=21.4
Q ss_pred EEEEEecCCeEEE-EecCCeEEEEECCCCeE
Q 048458 335 QYLGFGANDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 335 ~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
.-+++.+++..++ ...++.+.+||+++++.
T Consensus 277 ~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 5567777775444 44567799999998875
No 86
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=81.73 E-value=29 Score=31.84 Aligned_cols=55 Identities=11% Similarity=0.029 Sum_probs=38.2
Q ss_pred EEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEec--CCeEEEEECCCCeEEE
Q 048458 306 CSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRND--DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 306 i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~--~~~l~~ydl~~~~~~~ 366 (386)
=.||+++- .....+.+|+..... ..+++.+||+ .++... ++.+.+||+++++...
T Consensus 298 ~~V~VID~----~t~~vv~~i~~g~~p--~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 298 KEVTSVTG----LVGQTSSQISLGHDV--DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CeEEEEEC----CCCEEEEEEECCCCc--CeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 35888884 457777888765422 5677788886 555433 5679999999988654
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=81.10 E-value=28 Score=30.51 Aligned_cols=102 Identities=13% Similarity=0.122 Sum_probs=55.3
Q ss_pred eEEEEEECCC-ce--eeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEE
Q 048458 248 DIIVSFDFGD-ET--FRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWIN 322 (386)
Q Consensus 248 ~~il~fD~~~-~~--~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~ 322 (386)
+.|..+|+.+ .. ......+.. .....+.-. +|++.++... + ..+.||.++..+.......
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~~l~~~~~-d-------g~i~i~~~~~~~~~~~~~~ 234 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLK-------YQIRDVALLPKEQEGYACSSI-D-------GRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCS-------SCEEEEEECSGGGCEEEEEET-T-------SEEEEEECCTTCCSTTCTT
T ss_pred CeEEEEECCccccccceeeecCCC-------CceeEEEECCCCCCEEEEEec-C-------CcEEEEEEcCCCccccccc
Confidence 6899999987 32 333322221 122233333 4666555554 3 5899999985311111122
Q ss_pred EEEeecCC--------CceeEEEEEecCCeEEE-EecCCeEEEEECCCCeE
Q 048458 323 LFTVDLRA--------QFAWQYLGFGANDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 323 ~~~i~~~~--------~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
...+.... ......+++.+++..++ ...++.+.+||+++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 22332221 11225667777776444 45567799999998875
No 88
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=81.00 E-value=51 Score=33.46 Aligned_cols=144 Identities=9% Similarity=-0.019 Sum_probs=77.1
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEEC--CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLN--GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~--G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
..+..|+..++.++... ..... ...-.+++.+ |. .|++.. ..|..||..+++|..+..........
T Consensus 427 ~Gl~~~~~~~~~~~~~~-~~~~~--~~~v~~i~~d~~g~-lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIE-LEKNE--LLDVRVFYEDKNKK-IWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECC-STTTC--CCCEEEEEECTTSE-EEEEET--------TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEec-cCCCC--CCeEEEEEECCCCC-EEEEEC--------CceEEEeCCCCeEEecccCccccccc
Confidence 35677888888887765 21111 1111133443 44 577765 57999999998887764322110000
Q ss_pred CccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCC-CceeEEEEEecCCeEEEEecC
Q 048458 274 HIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRA-QFAWQYLGFGANDEVMLRNDD 351 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~g~i~l~~~~ 351 (386)
.....+.+. +|+|.+.+... . |++++.. .+++..... .... ......+..+.+|.|++.+.
T Consensus 495 --~~i~~i~~d~~g~lWigt~~~---------G--l~~~~~~--~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 495 --NFVRSIAQDSEGRFWIGTFGG---------G--VGIYTPD--MQLVRKFNQ-YEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp --SCEEEEEECTTCCEEEEESSS---------C--EEEECTT--CCEEEEECT-TTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred --ceeEEEEEcCCCCEEEEEcCC---------C--EEEEeCC--CCeEEEccC-CCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 223334444 57776655422 2 3445431 233433211 1000 11113455566788999887
Q ss_pred CeE-EEEECCCCeEEEee
Q 048458 352 GEL-VLYDHKTQEVVQCE 368 (386)
Q Consensus 352 ~~l-~~ydl~~~~~~~v~ 368 (386)
..+ +.||+++++++...
T Consensus 558 ~Glv~~~d~~~~~~~~~~ 575 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVFQ 575 (781)
T ss_dssp TEEEEESCTTTCCCEEEC
T ss_pred CCceEEECCCCCcEEEcc
Confidence 457 99999999887654
No 89
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=80.44 E-value=30 Score=30.46 Aligned_cols=142 Identities=16% Similarity=0.110 Sum_probs=71.8
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceee-eecCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFR-YRKLPDCLYNTD 273 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~ 273 (386)
...+.+|+..++.=... ++........-.+.-+|...+.+.. . +.|..+|+.+.+.. .++.+.....
T Consensus 163 ~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~s~dg~~l~~~~~-~------~~i~~~d~~~~~~~~~~~~~~~~~~-- 230 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTA---IQNTGKMSTGLALDSEGKRLYTTNA-D------GELITIDTADNKILSRKKLLDDGKE-- 230 (353)
T ss_dssp SCEEEEEETTTTEEEEE---ECCCCTTCCCCEEETTTTEEEEECT-T------SEEEEEETTTTEEEEEEECCCSSSC--
T ss_pred CceEEEEcCCCCceEEE---ecCCCCccceEEECCCCCEEEEEcC-C------CeEEEEECCCCeEEEEEEcCCCCCC--
Confidence 44578888876532111 1100001111123336664444433 2 68899999877654 3454322111
Q ss_pred CccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEec-
Q 048458 274 HIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRND- 350 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~- 350 (386)
.....+... +|+..++..... ..+.+|-++. .....++..... .-++++++|+ +++...
T Consensus 231 --~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~------~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 231 --HFFINISLDTARQRAFITDSKA-------AEVLVVDTRN------GNILAKVAAPES---LAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp --CCEEEEEEETTTTEEEEEESSS-------SEEEEEETTT------CCEEEEEECSSC---CCEEEETTTTEEEEEETT
T ss_pred --cccceEEECCCCCEEEEEeCCC-------CEEEEEECCC------CcEEEEEEcCCC---ceEEECCCCCEEEEEECC
Confidence 122223333 455334443333 5777776542 223334443322 2366677775 666653
Q ss_pred CCeEEEEECCCCeEEE
Q 048458 351 DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 351 ~~~l~~ydl~~~~~~~ 366 (386)
++.+..||+++++...
T Consensus 293 ~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 293 AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp TTEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCeEEE
Confidence 5679999999988643
No 90
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=80.32 E-value=31 Score=30.65 Aligned_cols=106 Identities=8% Similarity=0.040 Sum_probs=59.2
Q ss_pred CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEE
Q 048458 231 GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYV 310 (386)
Q Consensus 231 G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~ 310 (386)
|.+||.... + ..|..+|+.+...+.+..|... ......-+|++.+.. . .. |++
T Consensus 61 ~~l~~~d~~-~------~~i~~~d~~~~~~~~~~~~~~v--------~~i~~~~dg~l~v~~--~--------~g--l~~ 113 (326)
T 2ghs_A 61 GTAWWFNIL-E------RELHELHLASGRKTVHALPFMG--------SALAKISDSKQLIAS--D--------DG--LFL 113 (326)
T ss_dssp TEEEEEEGG-G------TEEEEEETTTTEEEEEECSSCE--------EEEEEEETTEEEEEE--T--------TE--EEE
T ss_pred CEEEEEECC-C------CEEEEEECCCCcEEEEECCCcc--------eEEEEeCCCeEEEEE--C--------CC--EEE
Confidence 789998765 3 6899999999887777665321 111123478876654 2 23 455
Q ss_pred EeecCCCcceEEEEEeecCCC-ceeEEEEEecCCeEEEEec-------CCeEEEEECCCCeEEEe
Q 048458 311 MKENIEVEHWINLFTVDLRAQ-FAWQYLGFGANDEVMLRND-------DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 311 l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~~g~i~l~~~-------~~~l~~ydl~~~~~~~v 367 (386)
++-. .++............ ....-++++++|.+++... ...++.|| +++++.+
T Consensus 114 ~d~~--~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 114 RDTA--TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EETT--TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EECC--CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 5521 133433322211111 1124566777888877543 24588888 5666543
No 91
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.08 E-value=14 Score=32.06 Aligned_cols=109 Identities=4% Similarity=-0.038 Sum_probs=60.5
Q ss_pred CCe-EEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NGA-VHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G~-lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
+|. +||.... . +.|..+|..++ .+.+..|.. .-..++.. +|+|.+... .. ..+.
T Consensus 38 ~g~~l~~~~~~-~------~~i~~~~~~~~-~~~~~~~~~--------~~~~l~~~~dg~l~v~~~-~~-------~~i~ 93 (296)
T 3e5z_A 38 ARSAVIFSDVR-Q------NRTWAWSDDGQ-LSPEMHPSH--------HQNGHCLNKQGHLIACSH-GL-------RRLE 93 (296)
T ss_dssp GGTEEEEEEGG-G------TEEEEEETTSC-EEEEESSCS--------SEEEEEECTTCCEEEEET-TT-------TEEE
T ss_pred CCCEEEEEeCC-C------CEEEEEECCCC-eEEEECCCC--------CcceeeECCCCcEEEEec-CC-------CeEE
Confidence 565 9998765 3 68999999988 776655432 12233433 688765443 22 3566
Q ss_pred EEEEeecCCCcceEEEEEeecCC-CceeEEEEEecCCeEEEEec------------------CCeEEEEECCCCeEEEe
Q 048458 308 VYVMKENIEVEHWINLFTVDLRA-QFAWQYLGFGANDEVMLRND------------------DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~g~i~l~~~------------------~~~l~~ydl~~~~~~~v 367 (386)
+|..+. .+........... .....-++++++|.+++... ...++.||.+ ++.+.+
T Consensus 94 ~~d~~~----g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 94 RQREPG----GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp EECSTT----CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred EEcCCC----CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 554432 2333322111100 00013467778888888521 2368999988 555543
No 92
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=79.05 E-value=30 Score=29.60 Aligned_cols=137 Identities=13% Similarity=0.085 Sum_probs=70.3
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
..+.+|+.. +.++... .+... ....++.+ +|.+|+.... . ..|..+|.. .....+.+|...
T Consensus 83 ~~v~~~d~~-g~~~~~~--~~~~~--~~~~~i~~~~~g~l~v~~~~-~------~~i~~~~~~-g~~~~~~~~~~~---- 145 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYP--LPQPD--SGPYGITEGLNGDIWFTQLN-G------DRIGKLTAD-GTIYEYDLPNKG---- 145 (300)
T ss_dssp TEEEEECTT-SCEEEEE--CSSTT--CCEEEEEECSTTCEEEEETT-T------TEEEEECTT-SCEEEEECSSTT----
T ss_pred CeEEEECCC-CCeEEec--CCCCC--CCCccceECCCCCEEEEccC-C------CeEEEECCC-CCEEEccCCCCC----
Confidence 356677766 5554433 11110 11123333 5776654432 1 689999998 666666555422
Q ss_pred CccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCce-eEEEEEecCCeEEEEec-
Q 048458 274 HIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFA-WQYLGFGANDEVMLRND- 350 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~-~~~~~~~~~g~i~l~~~- 350 (386)
..-..++.. +|+|++..... .. |++++.. .+... +....... -.-++++++|.+++...
T Consensus 146 --~~~~~i~~d~~g~l~v~~~~~--------~~--i~~~~~~---g~~~~---~~~~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 146 --SYPAFITLGSDNALWFTENQN--------NS--IGRITNT---GKLEE---YPLPTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp --CCEEEEEECTTSSEEEEETTT--------TE--EEEECTT---CCEEE---EECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred --CCceeEEECCCCCEEEEecCC--------Ce--EEEECCC---CcEEE---eeCCCCCCCcceEEECCCCCEEEEccC
Confidence 122334443 67866655422 23 4555531 23332 22211111 14566677788888765
Q ss_pred CCeEEEEECCCCeEEEee
Q 048458 351 DGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 351 ~~~l~~ydl~~~~~~~v~ 368 (386)
...+..||+ ++++....
T Consensus 208 ~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 208 GNKIGRITT-TGEISEYD 224 (300)
T ss_dssp TTEEEEECT-TCCEEEEE
T ss_pred CCEEEEEcC-CCcEEEEE
Confidence 346999999 55555543
No 93
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.62 E-value=37 Score=30.44 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=21.5
Q ss_pred EEEEEecCCeEEE-EecCCeEEEEECCCCeE
Q 048458 335 QYLGFGANDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 335 ~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
.-+++.+++..++ ...++.+..||+++++.
T Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred eEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 5567777776444 45567799999998764
No 94
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=77.81 E-value=31 Score=29.12 Aligned_cols=138 Identities=8% Similarity=-0.001 Sum_probs=68.0
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
..+.+|+..++.-+... .... ....++.+ +|.+|+.... . +.|..+|..+........ ....
T Consensus 87 ~~i~~~d~~~~~~~~~~-~~~~----~~p~~i~~~~~g~l~v~~~~-~------~~i~~~~~~~~~~~~~~~-~~~~--- 150 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLP-FDGL----NYPEGLAVDTQGAVYVADRG-N------NRVVKLAAGSKTQTVLPF-TGLN--- 150 (270)
T ss_dssp TEEEEECTTCSCCEECC-CCSC----SSEEEEEECTTCCEEEEEGG-G------TEEEEECTTCCSCEECCC-CSCC---
T ss_pred CEEEEEeCCCceEeeee-cCCc----CCCcceEECCCCCEEEEECC-C------CEEEEEECCCceeEeecc-ccCC---
Confidence 35677777665433332 1100 01113333 5776655433 2 578888877654433221 1110
Q ss_pred CccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEec-C
Q 048458 274 HIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRND-D 351 (386)
Q Consensus 274 ~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~-~ 351 (386)
.-..++.. +|+|++..... ..+.+|..+. ..... ........-.-++++++|.+++... +
T Consensus 151 ---~p~~i~~~~~g~l~v~~~~~--------~~i~~~~~~~---~~~~~----~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 151 ---DPDGVAVDNSGNVYVTDTDN--------NRVVKLEAES---NNQVV----LPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp ---SCCCEEECTTCCEEEEEGGG--------TEEEEECTTT---CCEEE----CCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred ---CceeEEEeCCCCEEEEECCC--------CEEEEEecCC---CceEe----ecccCCCCceEEEECCCCCEEEEECCC
Confidence 11223333 67866655433 3555554332 11111 1111111114567777888888764 4
Q ss_pred CeEEEEECCCCeEEEe
Q 048458 352 GELVLYDHKTQEVVQC 367 (386)
Q Consensus 352 ~~l~~ydl~~~~~~~v 367 (386)
..+..||++++.....
T Consensus 213 ~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 213 NQVVKLLAGSTTSTVL 228 (270)
T ss_dssp SCEEEECTTCSCCEEC
T ss_pred CcEEEEcCCCCcceee
Confidence 5699999988765543
No 95
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=77.77 E-value=59 Score=32.31 Aligned_cols=95 Identities=11% Similarity=0.214 Sum_probs=56.3
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+......- ..+. .....+.-. +|++.+.+... ..+.||-+.. . ..+.++
T Consensus 541 ~~v~vwd~~~~~~~~~~-~~h~------~~v~~v~~spdg~~l~sg~~D--------g~i~iwd~~~----~--~~~~~~ 599 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTL-AGHT------GYVSTVAVSPDGSLCASGGKD--------GVVLLWDLAE----G--KKLYSL 599 (694)
T ss_dssp SCEEEEETTTCCEEEEE-CCCS------SCEEEEEECTTSSEEEEEETT--------SBCEEEETTT----T--EEEECC
T ss_pred CeEEEEECCCCcEEEEE-cCCC------CCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCC----C--ceEEEe
Confidence 67899999876543321 1111 122233333 57765555543 5899998864 1 223333
Q ss_pred ecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEE
Q 048458 327 DLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVV 365 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~ 365 (386)
... .....+++.+++.++....+..+.+||+++++..
T Consensus 600 ~~~--~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 600 EAN--SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIV 636 (694)
T ss_dssp BCS--SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred cCC--CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCCh
Confidence 322 2225677778887777666677999999998853
No 96
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=77.52 E-value=33 Score=30.21 Aligned_cols=54 Identities=7% Similarity=0.233 Sum_probs=30.6
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC----eEEE-EecCCeEEEEECCC
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND----EVML-RNDDGELVLYDHKT 361 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g----~i~l-~~~~~~l~~ydl~~ 361 (386)
..+.||.++. .+.|....++..... ...-+++.+++ ..++ ...++.+..||+++
T Consensus 189 ~~v~lWd~~~---~~~~~~~~~l~~h~~-~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 189 NLIKLWKEEE---DGQWKEEQKLEAHSD-WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp SBCCEEEECT---TSCEEEEECCBCCSS-CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CeEEEEEeCC---CCccceeeecccCCC-ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 5899998863 245766554432111 11445555543 3343 34566788888776
No 97
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=77.48 E-value=39 Score=30.12 Aligned_cols=136 Identities=10% Similarity=0.184 Sum_probs=65.6
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCce-eeeec-CCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDET-FRYRK-LPDCLY 270 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~-~~~i~-~P~~~~ 270 (386)
...+.+|+..++.++.+. .+.... ..-..+.+ +|.+...+.. + +.|..+|+.++. ...+. +....
T Consensus 82 D~~v~iw~~~~~~~~~~~-~~~~h~--~~v~~v~~sp~~~~l~s~s~-D------~~v~iwd~~~~~~~~~~~~~~~h~- 150 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVT-TLEGHE--NEVKSVAWAPSGNLLATCSR-D------KSVWVWEVDEEDEYECVSVLNSHT- 150 (345)
T ss_dssp TSCEEEEEECCC-EEEEE-EECCCS--SCEEEEEECTTSSEEEEEET-T------SCEEEEEECTTSCEEEEEEECCCC-
T ss_pred CCcEEEEEccCCCeEEEE-EccCCC--CCceEEEEeCCCCEEEEEEC-C------CeEEEEECCCCCCeEEEEEecCcC-
Confidence 445778887776654433 111100 00012222 4554444433 2 578888887542 22221 11111
Q ss_pred CCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-
Q 048458 271 NTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR- 348 (386)
Q Consensus 271 ~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~- 348 (386)
.....+.-. +|.+.+... .+ ..+.+|.++. ..|....++.... ....-+++.++|..++.
T Consensus 151 -----~~v~~~~~~p~~~~l~s~s-~d-------~~i~~w~~~~----~~~~~~~~~~~h~-~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 151 -----QDVKHVVWHPSQELLASAS-YD-------DTVKLYREEE----DDWVCCATLEGHE-STVWSLAFDPSGQRLASC 212 (345)
T ss_dssp -----SCEEEEEECSSSSCEEEEE-TT-------SCEEEEEEET----TEEEEEEEECCCS-SCEEEEEECTTSSEEEEE
T ss_pred -----CCeEEEEECCCCCEEEEEe-CC-------CcEEEEEecC----CCEEEEEEecCCC-CceEEEEECCCCCEEEEE
Confidence 111222222 455544444 34 5899998874 4576665554322 11245666777765444
Q ss_pred ecCCeEEEEEC
Q 048458 349 NDDGELVLYDH 359 (386)
Q Consensus 349 ~~~~~l~~ydl 359 (386)
..++.+..||.
T Consensus 213 s~D~~v~iW~~ 223 (345)
T 3fm0_A 213 SDDRTVRIWRQ 223 (345)
T ss_dssp ETTSCEEEEEE
T ss_pred eCCCeEEEecc
Confidence 34556777774
No 98
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=77.28 E-value=66 Score=32.67 Aligned_cols=150 Identities=12% Similarity=0.085 Sum_probs=77.5
Q ss_pred eEEEEEcCCCceeecCCCC--CCccccCCCceEEEC-CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCC-CCCC
Q 048458 197 DIQVYSLKNNCWRRIQPNV--PCIPCLSSNSTVHLN-GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDC-LYNT 272 (386)
Q Consensus 197 ~~~vyss~~~~W~~~~~~~--p~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~-~~~~ 272 (386)
.+..|+..++.++...... +.......-..++.+ .--.|++.. ..|..+|..+..+..+..... ....
T Consensus 236 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~l 307 (795)
T 4a2l_A 236 GLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF--------NDLNIYHEGTDSFASYSSNPVENGSL 307 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES--------SCEEEEETTTTEEEEECCCTTSTTSC
T ss_pred CeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC--------ChhheEcCCCCeEEEEecCCCCCCCC
Confidence 5777888887776654111 111101111133433 234677766 468999999999988743221 1100
Q ss_pred CCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCC---ceeEEEEEecCCeEEEE
Q 048458 273 DHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQ---FAWQYLGFGANDEVMLR 348 (386)
Q Consensus 273 ~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~~g~i~l~ 348 (386)
. ......+.+. +|.|.+.+... .+..+..+ ...+......+.... .....+..+++|.+++.
T Consensus 308 ~-~~~i~~i~~D~~g~lWigt~~~---------Gl~~~~~~----~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiG 373 (795)
T 4a2l_A 308 S-QRSVRSIFMDSQGGMWLGTYFG---------GLNYYHPI----RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIG 373 (795)
T ss_dssp S-SSCEEEEEECTTSCEEEEESSS---------CEEEECGG----GGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEE
T ss_pred C-CCcEEEEEEeCCcCEEEEECCC---------CeEEeCCC----cccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEE
Confidence 0 0233344444 57766544322 33333222 123332221111111 11144556667789998
Q ss_pred ecCCeEEEEECCCCeEEEee
Q 048458 349 NDDGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 349 ~~~~~l~~ydl~~~~~~~v~ 368 (386)
+..+.|..||.++++++...
T Consensus 374 t~~~Gl~~~~~~~~~~~~~~ 393 (795)
T 4a2l_A 374 TNDGGLNLYNPITQRFTSYT 393 (795)
T ss_dssp ESSSCEEEECTTTCCEEEEC
T ss_pred ECCCCeEEEcCCCCcEEEEe
Confidence 87666999999998887653
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=77.23 E-value=40 Score=30.16 Aligned_cols=54 Identities=11% Similarity=0.044 Sum_probs=31.4
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeE
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEV 364 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~ 364 (386)
..+.+|-+.. ...+.++.... ....-+++.+++..++. ..++.+..||+++.+.
T Consensus 314 ~~i~v~d~~~------~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 314 STIAVYTVYS------GEQITMLKGHY-KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp TEEEEEETTT------CCEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred CEEEEEECcC------CcceeeeccCC-CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 4888888763 12333333211 12256777788765554 4567799999998874
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=76.37 E-value=39 Score=29.59 Aligned_cols=142 Identities=12% Similarity=0.047 Sum_probs=71.9
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE-----CCeEEEEEEeecCCCCCceEEEEEECCCceeee-ec---C
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL-----NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRY-RK---L 265 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~-----~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~-i~---~ 265 (386)
...+.+|+.+++.=.... ..... -..+.+ +|.....+.. + +.|..||+.+..... +. +
T Consensus 189 d~~i~i~d~~~~~~~~~~-~~~~~-----v~~~~~~~~~~~~~~l~~~~~-d------g~i~i~d~~~~~~~~~~~~~~~ 255 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWET-NIKNG-----VCSLEFDRKDISMNKLVATSL-E------GKFHVFDMRTQHPTKGFASVSE 255 (357)
T ss_dssp TSEEEEEETTTTEEEEEE-ECSSC-----EEEEEESCSSSSCCEEEEEES-T------TEEEEEEEEEEETTTEEEEEEE
T ss_pred CCeEEEEECccCceeeec-CCCCc-----eEEEEcCCCCCCCCEEEEECC-C------CeEEEEeCcCCCcccceeeecc
Confidence 346888888876422111 11100 012222 4555555544 2 678889887643211 11 1
Q ss_pred CCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCC-------------CcceEEEEEeecCCC
Q 048458 266 PDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIE-------------VEHWINLFTVDLRAQ 331 (386)
Q Consensus 266 P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~-------------~~~W~~~~~i~~~~~ 331 (386)
.... .....+.-. +|+-.++....+ ..+.+|.++.... ..++..+.++....
T Consensus 256 ~~~~------~~v~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 321 (357)
T 3i2n_A 256 KAHK------STVWQVRHLPQNRELFLTAGGA-------GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST- 321 (357)
T ss_dssp ECCS------SCEEEEEEETTEEEEEEEEETT-------SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS-
T ss_pred CCCc------CCEEEEEECCCCCcEEEEEeCC-------CcEEEeecCCCcccccccCCCCccccccccceeeccccCC-
Confidence 1111 122233333 466455555555 6999999874211 12455555554322
Q ss_pred ceeEEEEEecCCeEEE--EecCCeEEEEECCCCe
Q 048458 332 FAWQYLGFGANDEVML--RNDDGELVLYDHKTQE 363 (386)
Q Consensus 332 ~~~~~~~~~~~g~i~l--~~~~~~l~~ydl~~~~ 363 (386)
....-+++.+++..++ ...++.+..||+++.+
T Consensus 322 ~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 322 QPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 1225667777776444 4456789999988653
No 101
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=76.25 E-value=33 Score=30.28 Aligned_cols=118 Identities=14% Similarity=0.176 Sum_probs=63.4
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCC-----C-------CCccceeEEEEe--CCeEEEEEeeC
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYN-----T-------DHIHRERSIGIL--EKSIALFVSCH 295 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~-----~-------~~~~~~~~L~~~--~G~L~lv~~~~ 295 (386)
+|.++|.... . +.|..||..+..+..+..+..... . .....-..++.. +|+|+++...
T Consensus 29 ~g~~l~v~~~-~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~- 100 (322)
T 2fp8_A 29 TNKGFYTSVQ-D------GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY- 100 (322)
T ss_dssp TCSSEEEECT-T------SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-
T ss_pred CCCEEEEEcC-C------CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-
Confidence 5777887654 2 689999999877776643321100 0 000112334444 5787776542
Q ss_pred CCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCcee-EEEEEec-CCeEEEEecC------------------CeEE
Q 048458 296 TEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW-QYLGFGA-NDEVMLRNDD------------------GELV 355 (386)
Q Consensus 296 ~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~-~g~i~l~~~~------------------~~l~ 355 (386)
.. |++++.. .+..+.+..........+ .-+++++ +|.+++.... +.++
T Consensus 101 --------~~--i~~~d~~--~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 101 --------YH--LSVVGSE--GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp --------TE--EEEECTT--CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred --------CC--EEEEeCC--CCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 12 4455421 122222211111001111 4477888 8889987532 4599
Q ss_pred EEECCCCeEEEe
Q 048458 356 LYDHKTQEVVQC 367 (386)
Q Consensus 356 ~ydl~~~~~~~v 367 (386)
.||+++++++.+
T Consensus 169 ~~d~~~~~~~~~ 180 (322)
T 2fp8_A 169 KYDPSTKETTLL 180 (322)
T ss_dssp EEETTTTEEEEE
T ss_pred EEeCCCCEEEEe
Confidence 999999887654
No 102
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=76.07 E-value=38 Score=29.27 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=79.6
Q ss_pred cceEEEEEcCCCce-eecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCce-eeeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCW-RRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDET-FRYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W-~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~~~~ 272 (386)
...+.+++..++.= +.++ ++.. .+...-...++.+|-++.. . +.+.+||..+.+ ...++.|..
T Consensus 42 ~S~v~~vD~~tgkv~~~~~--l~~~--~fgeGi~~~~~~ly~ltw~-~------~~v~v~D~~tl~~~~ti~~~~~---- 106 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAE--VPPP--YFGAGIVAWRDRLIQLTWR-N------HEGFVYDLATLTPRARFRYPGE---- 106 (243)
T ss_dssp SCEEEEEETTTCCEEEEEE--CCTT--CCEEEEEEETTEEEEEESS-S------SEEEEEETTTTEEEEEEECSSC----
T ss_pred CceEEEEECCCCCEEEEEe--CCCC--cceeEEEEeCCEEEEEEee-C------CEEEEEECCcCcEEEEEeCCCC----
Confidence 56789999988743 2222 2211 1111123467788888765 3 789999998754 455666532
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCC-Cc--ee-EEEEEecCCeEEEE
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRA-QF--AW-QYLGFGANDEVMLR 348 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~-~~--~~-~~~~~~~~g~i~l~ 348 (386)
...|+..+++|++..+ . .+ |+++|-. .=..+.+|.... .. .. .-+.. .+|+||..
T Consensus 107 -----Gwglt~dg~~L~vSdg--s-------~~--l~~iDp~----t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~lyan 165 (243)
T 3mbr_X 107 -----GWALTSDDSHLYMSDG--T-------AV--IRKLDPD----TLQQVGSIKVTAGGRPLDNLNELEW-VNGELLAN 165 (243)
T ss_dssp -----CCEEEECSSCEEEECS--S-------SE--EEEECTT----TCCEEEEEECEETTEECCCEEEEEE-ETTEEEEE
T ss_pred -----ceEEeeCCCEEEEECC--C-------Ce--EEEEeCC----CCeEEEEEEEccCCcccccceeeEE-eCCEEEEE
Confidence 2355666777777654 2 34 6777731 122344454322 11 11 11221 26788876
Q ss_pred ec-CCeEEEEECCCCeE-EEeee
Q 048458 349 ND-DGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 349 ~~-~~~l~~ydl~~~~~-~~v~~ 369 (386)
.. ...+...|++++++ ..+..
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEEC
T ss_pred ECCCCeEEEEECCCCCEEEEEEC
Confidence 53 45799999999996 55665
No 103
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=75.32 E-value=22 Score=34.99 Aligned_cols=121 Identities=9% Similarity=0.061 Sum_probs=64.0
Q ss_pred CceEEECCeEEEEEE-eecCCCCCceEEEEEEC-CC--ceeeeecCCCCCCCC---CCccceeEEEEeCCeEEEEEeeCC
Q 048458 224 NSTVHLNGAVHWMAI-RKESDGTNKDIIVSFDF-GD--ETFRYRKLPDCLYNT---DHIHRERSIGILEKSIALFVSCHT 296 (386)
Q Consensus 224 ~~~v~~~G~lywl~~-~~~~~~~~~~~il~fD~-~~--~~~~~i~~P~~~~~~---~~~~~~~~L~~~~G~L~lv~~~~~ 296 (386)
..++..+|.+|.... . +.|.++|. .+ +.|+.- ++...... ........++..+|++++....
T Consensus 56 ~~P~v~~g~vyv~~~~~--------~~v~AlD~~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP--------NNTYALNLNDPGKIVWQHK-PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-- 124 (571)
T ss_dssp SCCEEETTEEEEECSTT--------TCEEEEETTCTTSEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--
T ss_pred cccEEECCEEEEEeCCC--------CEEEEEeCCCCccEEEEEc-CCCCccccccccccccccccEEECCEEEEEeCC--
Confidence 457889999998765 4 67999998 54 456643 22111000 0000112345567777665431
Q ss_pred CCCCCCCCEEEEEEEeecCCCcceEEEEEee-cCCCceeEEEEEecCCeEEEEec------CCeEEEEECCCCeEEE
Q 048458 297 EDNTAGLGICSVYVMKENIEVEHWINLFTVD-LRAQFAWQYLGFGANDEVMLRND------DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 297 ~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~ 366 (386)
.. |..++-...+..|.....-. ........|+.. ++.|++... ++.++.||.+|++..+
T Consensus 125 -------g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 125 -------GH--LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp -------SE--EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred -------CE--EEEEECCCCCEEEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 22 45566322345676532100 000011134332 466777654 4679999999998665
No 104
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=75.18 E-value=44 Score=29.62 Aligned_cols=95 Identities=12% Similarity=0.132 Sum_probs=52.4
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+......- .... .....+.-. +|++.+.+... ..+.+|-+... ....++
T Consensus 164 ~~i~~wd~~~~~~~~~~-~~h~------~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~~------~~~~~~ 222 (340)
T 1got_B 164 TTCALWDIETGQQTTTF-TGHT------GDVMSLSLAPDTRLFVSGACD--------ASAKLWDVREG------MCRQTF 222 (340)
T ss_dssp SCEEEEETTTTEEEEEE-CCCS------SCEEEEEECTTSSEEEEEETT--------SCEEEEETTTC------SEEEEE
T ss_pred CcEEEEECCCCcEEEEE-cCCC------CceEEEEECCCCCEEEEEeCC--------CcEEEEECCCC------eeEEEE
Confidence 67899999877543321 1111 122233333 56665555443 58999987631 122223
Q ss_pred ecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeE
Q 048458 327 DLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEV 364 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~ 364 (386)
.... ....-+++.+++..++. ..++.+..||+++++.
T Consensus 223 ~~h~-~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 223 TGHE-SDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp CCCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cCCc-CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 2111 11256677777765554 4566799999988764
No 105
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=74.23 E-value=51 Score=29.93 Aligned_cols=98 Identities=7% Similarity=0.026 Sum_probs=54.1
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEEe-CCeEEEEE-eeCCCCCCCCCCEEEEEEEeecCCCcceEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGIL-EKSIALFV-SCHTEDNTAGLGICSVYVMKENIEVEHWINLF 324 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~-~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~ 324 (386)
+.|..+|+.+.... .+..+. ....+.-. +|+..++. +..+ ..+.||.+.. .......
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~g~~d-------g~i~v~~~~~----~~~~~~~ 343 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGS---------QVTSLIWSPHSKEIMSTHGFPD-------NNLSIWSYSS----SGLTKQV 343 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSS---------CEEEEEECSSSSEEEEEECTTT-------CEEEEEEEET----TEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCC---------cEEEEEECCCCCeEEEEeecCC-------CcEEEEecCC----ccceeEE
Confidence 68999999866433 233211 11222222 55555554 4344 6999999884 3455554
Q ss_pred EeecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeEEE
Q 048458 325 TVDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~~~ 366 (386)
.+.... ....-+++.+++..++. ..++.+..||+++++...
T Consensus 344 ~~~~h~-~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 344 DIPAHD-TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEECCS-SCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EecCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 443222 11145677778865554 456779999999887543
No 106
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.69 E-value=17 Score=36.67 Aligned_cols=122 Identities=13% Similarity=0.163 Sum_probs=63.5
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCC--ceeeee-cCCCCCCC-CCCccceeEEEEeCCeEEEEEeeCCCCC
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGD--ETFRYR-KLPDCLYN-TDHIHRERSIGILEKSIALFVSCHTEDN 299 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~~~-~~~~~~~~~L~~~~G~L~lv~~~~~~~~ 299 (386)
..++..+|.+|..+.. +.|.++|..+ +.|+.- ..+..... .........++..+|++++... +
T Consensus 64 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--d--- 130 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF--------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--D--- 130 (689)
T ss_dssp CCCEEETTEEEEECGG--------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--T---
T ss_pred ecCEEECCEEEEEcCC--------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--C---
Confidence 3578899999987655 6799999864 456643 22211000 0000112233456777666542 2
Q ss_pred CCCCCEEEEEEEeecCCCcceEEEEEeecCCCce--eEEEEEecCCeEEEEec------CCeEEEEECCCCeEEE
Q 048458 300 TAGLGICSVYVMKENIEVEHWINLFTVDLRAQFA--WQYLGFGANDEVMLRND------DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 300 ~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~--~~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~ 366 (386)
.. |..++-...+..|......+...... ..|+.. ++.|++... ++.++.||.+|++..+
T Consensus 131 ----g~--l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 131 ----GR--LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp ----SE--EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ----CE--EEEEECCCCCEeeeecCcCCCCCCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 23 34555322345677543211111111 134332 466766542 3569999999999654
No 107
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=73.58 E-value=45 Score=28.91 Aligned_cols=98 Identities=9% Similarity=0.006 Sum_probs=48.1
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+.+.......... .....+.-. +|+..++.. .+ ..+.+|.+.. . .....+
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~-~d-------~~i~iwd~~~----~--~~~~~~ 230 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDN------PPVSFVKFSPNGKYILAAT-LD-------NTLKLWDYSK----G--KCLKTY 230 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSC------CCEEEEEECTTSSEEEEEE-TT-------TEEEEEETTT----T--EEEEEE
T ss_pred CcEEEEECCCCceeeEEeccCC------CceEEEEECCCCCEEEEEc-CC-------CeEEEEECCC----C--cEEEEE
Confidence 6799999987654322111111 111122222 566555544 33 5899998763 1 122222
Q ss_pred ecCCCcee--EEEEEecCCeEEEEe-cCCeEEEEECCCCeEE
Q 048458 327 DLRAQFAW--QYLGFGANDEVMLRN-DDGELVLYDHKTQEVV 365 (386)
Q Consensus 327 ~~~~~~~~--~~~~~~~~g~i~l~~-~~~~l~~ydl~~~~~~ 365 (386)
.......+ .......++..++.. .++.+.+||+++++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 231 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp CSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred EecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 22111111 112222345555543 4567999999988753
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=73.38 E-value=43 Score=28.64 Aligned_cols=94 Identities=10% Similarity=0.121 Sum_probs=55.3
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+... ..+.... .....+.-. +|+ ++....+ ..+.+|.++. . .....
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~--------~~i~~~~~~~~~~--l~~~~~d-------g~v~iwd~~~----~--~~~~~ 261 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHE--------SFVYCIKLLPNGD--IVSCGED-------RTVRIWSKEN----G--SLKQV 261 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCS--------SCEEEEEECTTSC--EEEEETT-------SEEEEECTTT----C--CEEEE
T ss_pred CeEEEEECCchhhhhhhhcCC--------ceEEEEEEecCCC--EEEEecC-------CEEEEEECCC----C--ceeEE
Confidence 6899999986543 2233111 122233333 454 4444445 6899998764 1 22333
Q ss_pred eecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEE
Q 048458 326 VDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVV 365 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~ 365 (386)
+.... ....-+++.+++.++....++.+..||++++++.
T Consensus 262 ~~~~~-~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 262 ITLPA-ISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EECSS-SCEEEEEECTTSCEEEEETTSCEEEEESCGGGCC
T ss_pred EeccC-ceEEEEEEccCCCEEEEeCCCcEEEEeCCCCcee
Confidence 33222 1225667778888776667778999999988763
No 109
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=72.82 E-value=48 Score=28.97 Aligned_cols=138 Identities=9% Similarity=0.055 Sum_probs=78.1
Q ss_pred cceEEEEEcCCCce-eecCCCCCCccccCCCceE-EECCeEEEEEEeecCCCCCceEEEEEECCCce-eeeecCCCCCCC
Q 048458 195 FSDIQVYSLKNNCW-RRIQPNVPCIPCLSSNSTV-HLNGAVHWMAIRKESDGTNKDIIVSFDFGDET-FRYRKLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W-~~~~~~~p~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~~~ 271 (386)
...+.+++..++.= +.++ ++. ..+ ..++ ..++.+|-+... + ..+.+||..+.+ ...++.|...
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~--l~~--~~F-geGit~~g~~ly~ltw~-~------~~v~v~D~~t~~~~~ti~~~~eG-- 129 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIE--LGK--RYF-GEGISDWKDKIVGLTWK-N------GLGFVWNIRNLRQVRSFNYDGEG-- 129 (262)
T ss_dssp EEEEEEECTTTCCEEEEEE--CCT--TCC-EEEEEEETTEEEEEESS-S------SEEEEEETTTCCEEEEEECSSCC--
T ss_pred CceEEEEECCCCcEEEEEe--cCC--ccc-eeEEEEeCCEEEEEEee-C------CEEEEEECccCcEEEEEECCCCc--
Confidence 46788999988742 2222 211 111 1234 456688877655 3 789999998654 4556765421
Q ss_pred CCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCC-Ccee---EEEEEecCCeEEE
Q 048458 272 TDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRA-QFAW---QYLGFGANDEVML 347 (386)
Q Consensus 272 ~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~-~~~~---~~~~~~~~g~i~l 347 (386)
..|+..+++|++..+ . ++ ||++|-. .=..+.+|.... .... .-+... +|.|+.
T Consensus 130 -------~glt~dg~~L~~SdG--s-------~~--i~~iDp~----T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 130 -------WGLTHNDQYLIMSDG--T-------PV--LRFLDPE----SLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp -------CCEEECSSCEEECCS--S-------SE--EEEECTT----TCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred -------eEEecCCCEEEEECC--C-------Ce--EEEEcCC----CCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 244455666666543 2 23 6777731 122344554422 1111 113333 678887
Q ss_pred Eec-CCeEEEEECCCCeE-EEeee
Q 048458 348 RND-DGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 348 ~~~-~~~l~~ydl~~~~~-~~v~~ 369 (386)
... ...+...|++++++ ..+..
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEEC
T ss_pred EEccCCeEEEEECCCCcEEEEEEC
Confidence 664 45699999999996 55666
No 110
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=72.56 E-value=10 Score=38.19 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=63.1
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCCc--eeeeec-CCCCCCC-CCCccceeEEEEeCCeEEEEEeeCCCCC
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRYRK-LPDCLYN-TDHIHRERSIGILEKSIALFVSCHTEDN 299 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~i~-~P~~~~~-~~~~~~~~~L~~~~G~L~lv~~~~~~~~ 299 (386)
..++..+|.+|..... +.|.++|..+. .|+.-. .+..... .........++..+|++++....
T Consensus 71 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----- 137 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW--------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----- 137 (677)
T ss_dssp CCCEEETTEEEEECGG--------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-----
T ss_pred eCCEEECCEEEEECCC--------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-----
Confidence 4578899999987665 68999998755 465431 1111000 00001122344567777665332
Q ss_pred CCCCCEEEEEEEeecCCCcceEEEEEeecCCCcee--EEEEEecCCeEEEEec------CCeEEEEECCCCeEEE
Q 048458 300 TAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW--QYLGFGANDEVMLRND------DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 300 ~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~--~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~ 366 (386)
.. |..++-...+..|.............. .|+.. ++.|++... ++.++.||.+|++..+
T Consensus 138 ----g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 138 ----GR--LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ----SE--EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ----CE--EEEEECCCCCEEeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 23 445553222456765311000000111 33332 456766543 3569999999998655
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=72.15 E-value=52 Score=29.09 Aligned_cols=143 Identities=8% Similarity=0.099 Sum_probs=67.6
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE--ECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH--LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 272 (386)
...+.+|+.+++.-.... ...... . -..+. -+|.+...+.. + +.|..+|+.+.......+.....
T Consensus 148 dg~i~~wd~~~~~~~~~~-~~~~~~-~--i~~~~~~pdg~~lasg~~-d------g~i~iwd~~~~~~~~~~~~~~h~-- 214 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVH-SAKSDV-E--YSSGVLHKDSLLLALYSP-D------GILDVYNLSSPDQASSRFPVDEE-- 214 (343)
T ss_dssp TCCEEEEESSSSCEEEEE-CCCSSC-C--CCEEEECTTSCEEEEECT-T------SCEEEEESSCTTSCCEECCCCTT--
T ss_pred CCcEEEEECCCCcEEEEE-ecCCCC-c--eEEEEECCCCCEEEEEcC-C------CEEEEEECCCCCCCccEEeccCC--
Confidence 456888988876432211 001000 0 11222 25665544433 2 68999999876543122222010
Q ss_pred CCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCcee--EEEEEecCCeEEEE-
Q 048458 273 DHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW--QYLGFGANDEVMLR- 348 (386)
Q Consensus 273 ~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~--~~~~~~~~g~i~l~- 348 (386)
..-..+.-. +|...+... + ..+.||-+........... .... .... ..++++++|..++.
T Consensus 215 ---~~v~~l~fs~~g~~l~s~~--~-------~~v~iwd~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 215 ---AKIKEVKFADNGYWMVVEC--D-------QTVVCFDLRKDVGTLAYPT---YTIP-EFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp ---SCEEEEEECTTSSEEEEEE--S-------SBEEEEETTSSTTCBSSCC---CBC------CCEEEEECTTSSEEEEE
T ss_pred ---CCEEEEEEeCCCCEEEEEe--C-------CeEEEEEcCCCCcceeecc---cccc-cccccceEEEECCCCCEEEEe
Confidence 122233322 566555544 3 3899998875321111110 0000 0000 34777788876555
Q ss_pred ec-CCeEEEEEC--CCCeEEE
Q 048458 349 ND-DGELVLYDH--KTQEVVQ 366 (386)
Q Consensus 349 ~~-~~~l~~ydl--~~~~~~~ 366 (386)
.. ++.+.+|+. ..+.|+.
T Consensus 279 s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp ETTTTEEEEEEECTTTCSEEE
T ss_pred cCCCCcEEEEEEcccccceEe
Confidence 33 566777776 4455665
No 112
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=71.53 E-value=58 Score=29.32 Aligned_cols=94 Identities=10% Similarity=0.052 Sum_probs=51.0
Q ss_pred EEEEEECCCceeeeecCC-CCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 249 IIVSFDFGDETFRYRKLP-DCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 249 ~il~fD~~~~~~~~i~~P-~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
.|..+|+.+..-....+. ... .....+.-. +|.+.+..... ..+.+|.++. ...+.+
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~~l~s~~~d--------g~v~~wd~~~------~~~~~~ 300 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQ------KGILSLDWCHQDEHLLLSSGRD--------NTVLLWNPES------AEQLSQ 300 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCS------SCEEEEEECSSCSSCEEEEESS--------SEEEEECSSS------CCEEEE
T ss_pred eEEEEeCCCCCCCcEEeecCcc------CceeEEEeCCCCCCeEEEEeCC--------CCEEEeeCCC------Ccccee
Confidence 788999987431111121 111 122233332 56665555544 5899998764 123344
Q ss_pred eecCCCceeEEEEEecCC-eEEEEe-cCCeEEEEECCCCe
Q 048458 326 VDLRAQFAWQYLGFGAND-EVMLRN-DDGELVLYDHKTQE 363 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g-~i~l~~-~~~~l~~ydl~~~~ 363 (386)
+..... ...-+++.+++ .+++.. .++.+..||+++.+
T Consensus 301 ~~~~~~-~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 301 FPARGN-WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECSSS-CCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ecCCCC-ceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 432221 11346667776 566554 45679999998776
No 113
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=71.47 E-value=26 Score=35.11 Aligned_cols=121 Identities=13% Similarity=0.191 Sum_probs=63.1
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCC--ceeeee-cCCCCCCC-CCCccceeEEEEeCCeEEEEEeeCCCCC
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGD--ETFRYR-KLPDCLYN-TDHIHRERSIGILEKSIALFVSCHTEDN 299 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~~~-~~~~~~~~~L~~~~G~L~lv~~~~~~~~ 299 (386)
..++..+|.+|..... +.|.++|..+ +.|+.- ..+..... .........++..+|++++... +
T Consensus 60 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--d--- 126 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW--------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--D--- 126 (668)
T ss_dssp CCCEEETTEEEEEEGG--------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--T---
T ss_pred cCCEEECCEEEEECCC--------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--C---
Confidence 3578899999987765 6899999864 456653 22211000 0000011223445777665432 2
Q ss_pred CCCCCEEEEEEEeecCCCcceEEEEEeecCCCcee--EEEEEecCCeEEEEec------CCeEEEEECCCCeEEE
Q 048458 300 TAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW--QYLGFGANDEVMLRND------DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 300 ~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~--~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~~~~ 366 (386)
.. |..++-...+..|..... ........ .|+.. ++.|++... ++.++.||.+|++..+
T Consensus 127 ----g~--l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 127 ----GR--LIALDAKTGKAIWSQQTT-DPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp ----SE--EEEEETTTCCEEEEEECS-CTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ----CE--EEEEECCCCCEeeeeccC-CCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 22 445553223456775321 10001111 34332 456666543 2569999999998655
No 114
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=71.05 E-value=58 Score=29.18 Aligned_cols=94 Identities=10% Similarity=-0.044 Sum_probs=46.6
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.+.. .+.- .. .....+.-. +|.-+++....+ .++.||-+.. . . ..+
T Consensus 237 g~v~~wd~~~~~~~~~~~~--h~------~~v~~v~fsp~g~~~lasgs~D-------~~i~vwd~~~----~--~-~~~ 294 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAV--HS------QCVTGLVFSPHSVPFLASLSED-------CSLAVLDSSL----S--E-LFR 294 (344)
T ss_dssp SEEEEEESCC--CCEEEEC--CS------SCEEEEEECSSSSCCEEEEETT-------SCEEEECTTC----C--E-EEE
T ss_pred CcEEEEECCCCcEEEEEcC--CC------CCEEEEEEccCCCeEEEEEeCC-------CeEEEEECCC----C--c-EEE
Confidence 67899999865432 2221 11 122223322 454344444455 5899995542 1 1 122
Q ss_pred eecCCCce-eEEEEEecCCe-EEEE-ecCCeEEEEECCCCeEE
Q 048458 326 VDLRAQFA-WQYLGFGANDE-VMLR-NDDGELVLYDHKTQEVV 365 (386)
Q Consensus 326 i~~~~~~~-~~~~~~~~~g~-i~l~-~~~~~l~~ydl~~~~~~ 365 (386)
. ..+.. ..-+++++++. ++.. ..++.+..|++.++...
T Consensus 295 ~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 295 S--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp E--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC----
T ss_pred E--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCC
Confidence 2 22222 25567777664 5544 45677999999887653
No 115
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=70.87 E-value=53 Score=28.59 Aligned_cols=96 Identities=9% Similarity=-0.019 Sum_probs=53.5
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.+... +..+.. .. .++.. +|+..++..... ..+.+|-++. ..- ....
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~-------~~--~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~----~~~-~~~~ 78 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYD-------FV--DTAITSDCSNVVVTSDFC-------QTLVQIETQL----EPP-KVVA 78 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCC-------EE--EEEECSSSCEEEEEESTT-------CEEEEEECSS----SSC-EEEE
T ss_pred CeEEEEeCcccceeeeEEccCC-------cc--eEEEcCCCCEEEEEeCCC-------CeEEEEECCC----Cce-eEEe
Confidence 689999999877643 344311 12 44433 576444444433 4666666553 111 1222
Q ss_pred eecCCCceeEE-EEEecCCeEEEEecCC----eEEEEECCCCeEEE
Q 048458 326 VDLRAQFAWQY-LGFGANDEVMLRNDDG----ELVLYDHKTQEVVQ 366 (386)
Q Consensus 326 i~~~~~~~~~~-~~~~~~g~i~l~~~~~----~l~~ydl~~~~~~~ 366 (386)
+...... .- ++++++|..++..... .+..||+++++...
T Consensus 79 ~~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 79 IQEGQSS--MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEECSSC--CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred cccCCCC--ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 3322211 33 6777888644454433 79999999988644
No 116
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=70.41 E-value=55 Score=28.62 Aligned_cols=140 Identities=10% Similarity=-0.050 Sum_probs=77.7
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE-ECCeEEEEEEeecCCCCCceEEEEEECCCce-eeeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH-LNGAVHWMAIRKESDGTNKDIIVSFDFGDET-FRYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~~~~ 272 (386)
...+.+++..++.= +. .++..... ...++. .++.+|..... . +.+.++|..+.+ ...++.+ ..
T Consensus 43 ~s~v~~iD~~tg~v--~~-~i~l~~~~-fgeGi~~~g~~lyv~t~~-~------~~v~viD~~t~~v~~~i~~g-~~--- 107 (266)
T 2iwa_A 43 RSSVRQVALQTGKV--EN-IHKMDDSY-FGEGLTLLNEKLYQVVWL-K------NIGFIYDRRTLSNIKNFTHQ-MK--- 107 (266)
T ss_dssp TCEEEEEETTTCCE--EE-EEECCTTC-CEEEEEEETTEEEEEETT-C------SEEEEEETTTTEEEEEEECC-SS---
T ss_pred CCEEEEEECCCCCE--EE-EEecCCCc-ceEEEEEeCCEEEEEEec-C------CEEEEEECCCCcEEEEEECC-CC---
Confidence 56789999988752 11 11111111 112344 45578887654 3 789999998753 4556665 11
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCC-ce--e-EEEEEecCCeEEEE
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQ-FA--W-QYLGFGANDEVMLR 348 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~-~~--~-~~~~~~~~g~i~l~ 348 (386)
....|...+++|++.. .. + .|++++- ..-....+|..... .. . .-+.+. +|.+|..
T Consensus 108 ----~g~glt~Dg~~l~vs~--gs-------~--~l~viD~----~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn 167 (266)
T 2iwa_A 108 ----DGWGLATDGKILYGSD--GT-------S--ILYEIDP----HTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN 167 (266)
T ss_dssp ----SCCEEEECSSSEEEEC--SS-------S--EEEEECT----TTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred ----CeEEEEECCCEEEEEC--CC-------C--eEEEEEC----CCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence 2234555567777543 22 3 3667773 22344455554321 11 0 122333 6788876
Q ss_pred ec-CCeEEEEECCCCeE-EEeee
Q 048458 349 ND-DGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 349 ~~-~~~l~~ydl~~~~~-~~v~~ 369 (386)
.. ...+...|++++++ ..+..
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEEC
T ss_pred cCCCCeEEEEECCCCcEEEEEEC
Confidence 64 45799999999986 55655
No 117
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=70.40 E-value=58 Score=28.85 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=26.3
Q ss_pred EEEEEecCCeEEEEec-CCeEEEEECCCCeEEEeeec
Q 048458 335 QYLGFGANDEVMLRND-DGELVLYDHKTQEVVQCESS 370 (386)
Q Consensus 335 ~~~~~~~~g~i~l~~~-~~~l~~ydl~~~~~~~v~~~ 370 (386)
.-++++.+|.+++... .+.+..||++.+..+.+..+
T Consensus 233 ~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 233 DGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp EEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS
T ss_pred CeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECC
Confidence 3456677788888763 46799999987777777663
No 118
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=70.26 E-value=81 Score=30.50 Aligned_cols=118 Identities=11% Similarity=0.038 Sum_probs=61.9
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCCC--Cc-cceeEEEEe-CCeEEEEEeeCCCCCCCCCC
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNTD--HI-HRERSIGIL-EKSIALFVSCHTEDNTAGLG 304 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~--~~-~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~ 304 (386)
+|..-+.+.. . ...|.++|..+.+. ..++.+....+.. +. ..-..+... +|...++..... .
T Consensus 236 dg~~l~v~~~-~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~-------g 302 (543)
T 1nir_A 236 EDRYTIAGAY-W-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET-------G 302 (543)
T ss_dssp TTTEEEEEEE-E-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT-------T
T ss_pred CCCEEEEEEc-c-----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC-------C
Confidence 6765555543 1 16789999987554 4445432110000 00 112233333 455556665544 5
Q ss_pred EEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeE-EEEe-cCCeEEEEECCCCeEEE
Q 048458 305 ICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEV-MLRN-DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 305 ~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i-~l~~-~~~~l~~ydl~~~~~~~ 366 (386)
++.+|-+++.. . .++.+++..... .-++++++|+. +... .+..+.++|++++++..
T Consensus 303 ~i~vvd~~~~~--~--l~~~~i~~~~~~--~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 303 KVLLVNYKDID--N--LTVTSIGAAPFL--HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp EEEEEECTTSS--S--CEEEEEECCSSC--CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eEEEEEecCCC--c--ceeEEeccCcCc--cCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 77777665421 1 123345432211 45678888874 4443 34579999999998754
No 119
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=70.26 E-value=54 Score=28.46 Aligned_cols=29 Identities=10% Similarity=0.244 Sum_probs=20.4
Q ss_pred EEEEEecCCeEEEE-ecCCeEEEEECCCCe
Q 048458 335 QYLGFGANDEVMLR-NDDGELVLYDHKTQE 363 (386)
Q Consensus 335 ~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~ 363 (386)
.-+++.++|..++. ..++.+.+||+++++
T Consensus 310 ~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 55677888876665 456779999999875
No 120
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=70.10 E-value=61 Score=29.04 Aligned_cols=96 Identities=11% Similarity=0.059 Sum_probs=51.9
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+..... +.... .....+.-. +|++.++.. .+ ..+.+|.++... ....
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~-~d-------~~i~i~d~~~~~------~~~~ 284 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH--------GPISVLEFNDTNKLLLSAS-DD-------GTLRIWHGGNGN------SQNC 284 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS--------SCEEEEEEETTTTEEEEEE-TT-------SCEEEECSSSBS------CSEE
T ss_pred CeEEEEEcCCCceeeeeccCC--------CceEEEEECCCCCEEEEEc-CC-------CEEEEEECCCCc------cceE
Confidence 689999998754322 22111 122233333 566544444 33 589999877421 1112
Q ss_pred eecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEE
Q 048458 326 VDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~ 366 (386)
+... .....-+++.+++.++....++.+..||+++++...
T Consensus 285 ~~~~-~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 285 FYGH-SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp ECCC-SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEE
T ss_pred ecCC-CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeE
Confidence 2211 112255666777744445556789999998887543
No 121
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=69.46 E-value=84 Score=30.38 Aligned_cols=117 Identities=8% Similarity=0.051 Sum_probs=66.5
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEeC-CeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGILE-KSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~~-G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
+|...+.+.. . ...|.++|+.+.+... ++..... +. .....+..-+ |.+.+.....+ .++.
T Consensus 334 dg~~l~va~~-~-----~~~v~v~D~~tg~l~~~i~~g~~p--h~--g~g~~~~~p~~g~~~~s~~~~d-------~~V~ 396 (543)
T 1nir_A 334 SHRYFMTAAN-N-----SNKVAVIDSKDRRLSALVDVGKTP--HP--GRGANFVHPKYGPVWSTSHLGD-------GSIS 396 (543)
T ss_dssp TSCEEEEEEG-G-----GTEEEEEETTTTEEEEEEECSSSB--CC--TTCEEEEETTTEEEEEEEBSSS-------SEEE
T ss_pred CCCEEEEEec-C-----CCeEEEEECCCCeEEEeeccCCCC--CC--CCCcccCCCCCccEEEeccCCC-------ceEE
Confidence 6765444443 2 1688999999876543 3321110 00 1222333334 55544333344 6899
Q ss_pred EEEEeecC-CCcceEEEEEeecCCCceeEEEEEecCCe-EEEEec-------CCeEEEEECCCCeE
Q 048458 308 VYVMKENI-EVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRND-------DGELVLYDHKTQEV 364 (386)
Q Consensus 308 iW~l~~~~-~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~-------~~~l~~ydl~~~~~ 364 (386)
||-++..+ ....|..+.++....... ..+.+++++. ++.... +..+.+||.++.+.
T Consensus 397 v~d~~~~~~~~~~~~~v~~l~~~g~~~-~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 397 LIGTDPKNHPQYAWKKVAELQGQGGGS-LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEECCTTTCTTTBTSEEEEEECSCSCC-CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEEeCCCCCchhcCeEEEEEEcCCCCc-eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 99887421 123499999988654221 4566778885 454431 34699999998774
No 122
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=69.11 E-value=66 Score=29.04 Aligned_cols=50 Identities=20% Similarity=0.316 Sum_probs=33.6
Q ss_pred EEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCC
Q 048458 306 CSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQ 362 (386)
Q Consensus 306 i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~ 362 (386)
-.||+++- .....+.+++... . .-++++++|+.++....+.+.+||++++
T Consensus 286 ~~v~viD~----~t~~~v~~i~~~~--p-~~ia~spdg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 286 AEIWVMDT----KTKQRVARIPGRD--A-LSMTIDQQRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp SEEEEEET----TTTEEEEEEECTT--C-CEEEEETTTTEEEEECSSCEEEEECSSS
T ss_pred ceEEEEEC----CCCcEEEEEecCC--e-eEEEECCCCCEEEEeCCCeEEEEECCCC
Confidence 35666663 2346777787655 2 5678888886444443467999999999
No 123
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=68.04 E-value=63 Score=28.35 Aligned_cols=135 Identities=7% Similarity=-0.023 Sum_probs=74.4
Q ss_pred EEEEEcCCCceeecCCCCCCccccCCCceEE-ECCeEEEEEEeecCCCCCceEEEEEECCCce-eeeecCCCCCCCCCCc
Q 048458 198 IQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH-LNGAVHWMAIRKESDGTNKDIIVSFDFGDET-FRYRKLPDCLYNTDHI 275 (386)
Q Consensus 198 ~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~~~~~~~ 275 (386)
+.+++.+++.= +. .+ ... .....++. .++.+|-+... + ..+.+||..+.+ ...++.+..
T Consensus 77 v~~iD~~Tgkv--~~-~~-l~~-~~FgeGit~~g~~Ly~ltw~-~------~~v~V~D~~Tl~~~~ti~~~~e------- 137 (268)
T 3nok_A 77 LRQLSLESAQP--VW-ME-RLG-NIFAEGLASDGERLYQLTWT-E------GLLFTWSGMPPQRERTTRYSGE------- 137 (268)
T ss_dssp EEECCSSCSSC--SE-EE-ECT-TCCEEEEEECSSCEEEEESS-S------CEEEEEETTTTEEEEEEECSSC-------
T ss_pred EEEEECCCCcE--Ee-EE-CCC-CcceeEEEEeCCEEEEEEcc-C------CEEEEEECCcCcEEEEEeCCCc-------
Confidence 78888877631 11 11 111 11112344 45677777654 3 789999998754 455666532
Q ss_pred cceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCC---cee-EEEEEecCCeEEEEec-
Q 048458 276 HRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQ---FAW-QYLGFGANDEVMLRND- 350 (386)
Q Consensus 276 ~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~---~~~-~~~~~~~~g~i~l~~~- 350 (386)
...|+..+++|++..+ . . .|+++|-. .=..+.+|..... ..+ .-+... +|+|+....
T Consensus 138 --GwGLt~Dg~~L~vSdG--s-------~--~l~~iDp~----T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 138 --GWGLCYWNGKLVRSDG--G-------T--MLTFHEPD----GFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp --CCCEEEETTEEEEECS--S-------S--EEEEECTT----TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred --eeEEecCCCEEEEECC--C-------C--EEEEEcCC----CCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC
Confidence 2345556777777653 2 2 35677631 1233444543221 111 112222 678887664
Q ss_pred CCeEEEEECCCCeE-EEeee
Q 048458 351 DGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 351 ~~~l~~ydl~~~~~-~~v~~ 369 (386)
...+...|++++++ +++..
T Consensus 200 s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp CSEEEEECTTTCBEEEEEEC
T ss_pred CCeEEEEeCCCCcEEEEEEC
Confidence 45799999999996 55665
No 124
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=67.65 E-value=65 Score=28.36 Aligned_cols=96 Identities=18% Similarity=0.172 Sum_probs=52.8
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.+... +.-.. .....+.-. +|++.+... .+ ..+.||-++.. ....+
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~--------~~v~~l~~spd~~~l~s~s-~d-------g~i~iwd~~~~------~~~~~ 243 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHA--------MPIRSLTFSPDSQLLVTAS-DD-------GYIKIYDVQHA------NLAGT 243 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCS--------SCCCEEEECTTSCEEEEEC-TT-------SCEEEEETTTC------CEEEE
T ss_pred CeEEEEECCCCcEEEEEcccC--------CceeEEEEcCCCCEEEEEc-CC-------CeEEEEECCCc------ceeEE
Confidence 678999998765432 22111 111222222 566554444 44 58999987641 12223
Q ss_pred eecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeEEE
Q 048458 326 VDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~~~ 366 (386)
+.... ....-+++.+++..++. ..++.+..||+++++...
T Consensus 244 ~~~h~-~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 244 LSGHA-SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp ECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EcCCC-CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 32111 11145667777765554 456679999999887543
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=67.19 E-value=44 Score=29.61 Aligned_cols=97 Identities=14% Similarity=0.084 Sum_probs=53.0
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+.....+...... .....+.-. +|.+.+.+.. + ..+.||-+..... . ..++
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~------~~i~~~~~~pdg~~lasg~~-d-------g~i~iwd~~~~~~----~-~~~~ 209 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSD------VEYSSGVLHKDSLLLALYSP-D-------GILDVYNLSSPDQ----A-SSRF 209 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSS------CCCCEEEECTTSCEEEEECT-T-------SCEEEEESSCTTS----C-CEEC
T ss_pred CcEEEEECCCCcEEEEEecCCC------CceEEEEECCCCCEEEEEcC-C-------CEEEEEECCCCCC----C-ccEE
Confidence 6799999987766433211111 111222222 5666555543 3 5899998874211 1 0122
Q ss_pred ecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCe
Q 048458 327 DLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQE 363 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~ 363 (386)
.........-+++.++|..++...++.+..||+++.+
T Consensus 210 ~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 210 PVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred eccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 2211122256777788876665445579999988765
No 126
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=66.58 E-value=76 Score=28.77 Aligned_cols=145 Identities=10% Similarity=0.051 Sum_probs=66.4
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE---CCeEEEEEEeecCCCCCceEEEEEECCCceee-eecCCCCC-
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL---NGAVHWMAIRKESDGTNKDIIVSFDFGDETFR-YRKLPDCL- 269 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~- 269 (386)
...+.+|+.+++.-...- ..... ...+.+ +|.+...+.. + +.|..+|+.+.... .+..+...
T Consensus 186 d~~v~iwd~~~~~~~~~~-~~~~~-----v~~~~~~~~~~~~l~~~s~-d------~~v~iwd~~~~~~~~~~~~~~~~~ 252 (393)
T 1erj_A 186 DRTVRIWDLRTGQCSLTL-SIEDG-----VTTVAVSPGDGKYIAAGSL-D------RAVRVWDSETGFLVERLDSENESG 252 (393)
T ss_dssp TSEEEEEETTTTEEEEEE-ECSSC-----EEEEEECSTTCCEEEEEET-T------SCEEEEETTTCCEEEEEC------
T ss_pred CCcEEEEECCCCeeEEEE-EcCCC-----cEEEEEECCCCCEEEEEcC-C------CcEEEEECCCCcEEEeecccccCC
Confidence 456888888876532211 01000 011211 4555444443 2 67899999876543 23222111
Q ss_pred CCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCc------ceEEEEEeecCCCcee-EEEEEec
Q 048458 270 YNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVE------HWINLFTVDLRAQFAW-QYLGFGA 341 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~------~W~~~~~i~~~~~~~~-~~~~~~~ 341 (386)
..+. ..-..+.-. +|++.+... .+ ..+.+|.+....... ......++. .+..+ .-+++.+
T Consensus 253 ~~h~--~~v~~v~~~~~g~~l~s~s-~d-------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~ 320 (393)
T 1erj_A 253 TGHK--DSVYSVVFTRDGQSVVSGS-LD-------RSVKLWNLQNANNKSDSKTPNSGTCEVTYI--GHKDFVLSVATTQ 320 (393)
T ss_dssp CCCS--SCEEEEEECTTSSEEEEEE-TT-------SEEEEEEC---------------CEEEEEE--CCSSCEEEEEECG
T ss_pred CCCC--CCEEEEEECCCCCEEEEEe-CC-------CEEEEEECCCCCCcccccCCCCCcceEEEe--cccCcEEEEEECC
Confidence 1111 122223322 566554444 44 599999887421100 011111111 11111 4456666
Q ss_pred CCeEEEE-ecCCeEEEEECCCCeE
Q 048458 342 NDEVMLR-NDDGELVLYDHKTQEV 364 (386)
Q Consensus 342 ~g~i~l~-~~~~~l~~ydl~~~~~ 364 (386)
++..++. ..++.+..||+++++.
T Consensus 321 ~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 321 NDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp GGCEEEEEETTSEEEEEETTTCCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeE
Confidence 6655544 4566799999988774
No 127
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=66.46 E-value=67 Score=28.08 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=39.7
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-EecCCeEEEEECCCCe
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RNDDGELVLYDHKTQE 363 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~ 363 (386)
+|++.++.. .+ ..+.+|.+... ......+.... ....-+++.+++..++ ...++.+..||+++++
T Consensus 186 ~~~~l~~~~-~d-------g~i~i~d~~~~-----~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 186 KGKYIIAGH-KD-------GKISKYDVSNN-----YEYVDSIDLHE-KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp GGCEEEEEE-TT-------SEEEEEETTTT-----TEEEEEEECCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCEEEEEc-CC-------CEEEEEECCCC-----cEeEEEEecCC-CceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 455555444 33 58999987631 23333343222 1225566777776444 4556789999999877
Q ss_pred EEE
Q 048458 364 VVQ 366 (386)
Q Consensus 364 ~~~ 366 (386)
...
T Consensus 252 ~~~ 254 (369)
T 3zwl_B 252 VLK 254 (369)
T ss_dssp EEE
T ss_pred eee
Confidence 543
No 128
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=66.14 E-value=68 Score=28.04 Aligned_cols=66 Identities=14% Similarity=0.164 Sum_probs=37.5
Q ss_pred CeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCC-CceeEEEEEecCCeEEEE-ecCCeEEEEECCC
Q 048458 286 KSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRA-QFAWQYLGFGANDEVMLR-NDDGELVLYDHKT 361 (386)
Q Consensus 286 G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~ 361 (386)
|++.++... + ..+.+|.++... ..-.....+.... .....-+++.+++..++. ..++.+..||+.+
T Consensus 299 ~~~l~~~~~-d-------g~i~vwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ-V-------GKLYVWDLEVED--PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT-T-------SCEEEEECCSSS--GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEec-C-------CcEEEEECCCCC--CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 666555543 3 589999988521 1222333444321 122256777788865554 4567899999864
No 129
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=65.92 E-value=58 Score=32.02 Aligned_cols=123 Identities=15% Similarity=0.158 Sum_probs=63.2
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCC--ceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCC
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGD--ETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNT 300 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~ 300 (386)
..++..+|.+|..... ..|.++|..+ +.|+.- ..|....... ......++..+|++++... +
T Consensus 62 ~~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~-~~~~~g~a~~~~~v~~~t~--d---- 126 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCC-DVVNRGAAIYGDKVFFGTL--D---- 126 (582)
T ss_dssp CCCEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSS-CSCCCCCEEETTEEEEEET--T----
T ss_pred eccEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCccccccc-ccCCCccEEECCEEEEEeC--C----
Confidence 4578899999987654 3499999864 457653 2222110000 0011223456777766543 1
Q ss_pred CCCCEEEEEEEeecCCCcceEEEEEeecCCCcee--EEEEEec--CC--eEEEEec------CCeEEEEECCCCeEEEe
Q 048458 301 AGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW--QYLGFGA--ND--EVMLRND------DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 301 ~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~--~~~~~~~--~g--~i~l~~~------~~~l~~ydl~~~~~~~v 367 (386)
.. |..|+-...+..|.....-. ...... .|+.... +| .|++... ++.++.||.+|++..+.
T Consensus 127 ---g~--l~AlD~~TG~~~W~~~~~~~-~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 127 ---AS--VVALNKNTGKVVWKKKFADH-GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp ---TE--EEEEESSSCCEEEEEECSCG-GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred ---CE--EEEEECCCCCEEeeecCCCC-CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 22 45565322345676532110 001111 4544433 23 3444332 45799999999996653
No 130
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=65.65 E-value=66 Score=27.76 Aligned_cols=56 Identities=5% Similarity=0.202 Sum_probs=32.8
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC---eEEEE-ecCCeEEEEECCCC
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND---EVMLR-NDDGELVLYDHKTQ 362 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g---~i~l~-~~~~~l~~ydl~~~ 362 (386)
.++.||.++.. ...|....++..... ...-+++.+++ ..+.. ..++.+..||+++.
T Consensus 180 ~~v~lwd~~~~--~~~~~~~~~l~~H~~-~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 180 NLVKIWKYNSD--AQTYVLESTLEGHSD-WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SCEEEEEEETT--TTEEEEEEEECCCSS-CEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CcEEEEEEcCC--CceEEEEEEecCCCC-ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 58999998742 245666655542211 11456666653 44443 34566888888764
No 131
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=65.64 E-value=69 Score=27.98 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=30.3
Q ss_pred CEEEEEEEeecCC--------CcceEEEEEeecCCCceeEEEEEecC--CeEEEE-ecCCeEEEEECCCCe
Q 048458 304 GICSVYVMKENIE--------VEHWINLFTVDLRAQFAWQYLGFGAN--DEVMLR-NDDGELVLYDHKTQE 363 (386)
Q Consensus 304 ~~i~iW~l~~~~~--------~~~W~~~~~i~~~~~~~~~~~~~~~~--g~i~l~-~~~~~l~~ydl~~~~ 363 (386)
..+.+|.+..... ......+..+..... ....+++.++ +.+++. ..++.+.+||+++++
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC-DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC-CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCC-cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 5899999874211 112233333332211 0122334445 655554 445679999998864
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=65.54 E-value=63 Score=27.91 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=54.8
Q ss_pred EEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEee
Q 048458 249 IIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVD 327 (386)
Q Consensus 249 ~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~ 327 (386)
.|..+|+.+.+...+..+.... ....+... +|+..++. . ..+.+|-++. ...+..+.
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~---~-------~~v~~~d~~~------~~~~~~~~ 277 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV------FYFSTAVNPAKTRAFGA---Y-------NVLESFDLEK------NASIKRVP 277 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS------CEEEEEECTTSSEEEEE---E-------SEEEEEETTT------TEEEEEEE
T ss_pred ceEEEeCCCCCceEeecCCCCC------ceeeEEECCCCCEEEEe---C-------CeEEEEECCC------CcCcceec
Confidence 6889999988765444332211 11122222 55554444 2 4777776652 23334444
Q ss_pred cCCCceeEEEEEecCCe-EEEEecCCeEEEEECCCCeE-EEeee
Q 048458 328 LRAQFAWQYLGFGANDE-VMLRNDDGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 328 ~~~~~~~~~~~~~~~g~-i~l~~~~~~l~~ydl~~~~~-~~v~~ 369 (386)
..... .-+++.++|+ +++...++.+..||+++++. ..+..
T Consensus 278 ~~~~~--~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 278 LPHSY--YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp CSSCC--CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCce--eeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 33211 3466777775 55555566799999998874 44555
No 133
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=65.48 E-value=1.2e+02 Score=30.47 Aligned_cols=96 Identities=9% Similarity=0.170 Sum_probs=47.8
Q ss_pred eEEEEEECCCc-eeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEE
Q 048458 248 DIIVSFDFGDE-TFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLF 324 (386)
Q Consensus 248 ~~il~fD~~~~-~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~ 324 (386)
+.|..+|+.+. ..... +.... .....+.-. +|.+.++.. .+ ..+.+|.+... .....
T Consensus 119 g~i~vw~~~~~~~~~~~-~~~~~------~~v~~~~~~p~~~~~l~~~~-~d-------g~v~vwd~~~~--~~~~~--- 178 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQT-FEGHE------HFVMCVAFNPKDPSTFASGC-LD-------RTVKVWSLGQS--TPNFT--- 178 (814)
T ss_dssp SEEEEEEGGGTSEEEEE-EECCS------SCEEEEEEETTEEEEEEEEE-TT-------SEEEEEETTCS--SCSEE---
T ss_pred CEEEEEECCCCceEEEE-EcCCC------CcEEEEEEEcCCCCEEEEEe-CC-------CeEEEEECCCC--cceeE---
Confidence 68999999875 32222 11111 122223323 344444444 44 58999988642 12222
Q ss_pred EeecCCCceeEEEEEec--CCeEEE-EecCCeEEEEECCCCeE
Q 048458 325 TVDLRAQFAWQYLGFGA--NDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~--~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
+..........+++.+ ++..++ ...++.+..||+++++.
T Consensus 179 -~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 179 -LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp -EECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred -EecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 2211111113445544 555444 44566799999888774
No 134
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=64.84 E-value=66 Score=27.49 Aligned_cols=27 Identities=15% Similarity=0.421 Sum_probs=20.4
Q ss_pred eecccEEEeecCCCCccccEEEEccccccceec
Q 048458 95 SCSGLVCLLLNTFHSCHFPMFVWNPSTRKYKKI 127 (386)
Q Consensus 95 s~~GLl~~~~~~~~~~~~~~~V~NP~T~~~~~L 127 (386)
|.+|+|.+. .++. +.|||..|++...+
T Consensus 34 S~~~~lAvg--~D~t----V~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 34 SSGNVLAVA--LDNS----VYLWSASSGDILQL 60 (318)
T ss_dssp CTTSEEEEE--ETTE----EEEEETTTCCEEEE
T ss_pred CCCCEEEEE--eCCE----EEEEECCCCCEEEE
Confidence 667877665 4566 99999999987654
No 135
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=64.66 E-value=70 Score=27.70 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=34.7
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeEEE
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~~~ 366 (386)
.++.||-++. -..+.++.... .....+++.+++.+++. ..++.+..||+++.+...
T Consensus 208 ~~i~iWd~~~------~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 208 LTIKIWDYQT------KSCVATLEGHM-SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp SEEEEEETTT------TEEEEEEECCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CeEEEEeCCC------CccceeeCCCC-CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 6999998763 12334443221 11145667777766554 446679999999987543
No 136
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=64.39 E-value=89 Score=28.77 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=36.1
Q ss_pred eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-EecCCeEEEEECCCC
Q 048458 284 LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RNDDGELVLYDHKTQ 362 (386)
Q Consensus 284 ~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~~~ 362 (386)
.+|.+.+++... ..+.+|-+.. -..+.++.... .....+++.+++..++ ...++.+..||++++
T Consensus 278 ~~~~~l~~~~~d--------~~i~vwd~~~------~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 278 GHGNIVVSGSYD--------NTLIVWDVAQ------MKCLYILSGHT-DRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EETTEEEEEETT--------SCEEEEETTT------TEEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEeCC--------CeEEEEECCC------CcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 345555554433 4799997763 12223332111 1124566666665444 445566888888877
Q ss_pred eE
Q 048458 363 EV 364 (386)
Q Consensus 363 ~~ 364 (386)
+.
T Consensus 343 ~~ 344 (464)
T 3v7d_B 343 EL 344 (464)
T ss_dssp EE
T ss_pred cE
Confidence 64
No 137
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=64.36 E-value=88 Score=29.39 Aligned_cols=116 Identities=15% Similarity=0.138 Sum_probs=62.1
Q ss_pred eEEEEEECCCceeeeec-CC----CCCCC-CC-CccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcce
Q 048458 248 DIIVSFDFGDETFRYRK-LP----DCLYN-TD-HIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHW 320 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~-~P----~~~~~-~~-~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W 320 (386)
+.+.++|..++....+. .+ ..... .. .......+...+++|++...... +.+.....=.||++|- ..+
T Consensus 286 g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~-~gthk~~s~~VsVID~----~T~ 360 (426)
T 3c75_H 286 GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRD-EWKHKAASRFVVVLNA----ETG 360 (426)
T ss_dssp SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECC-TTCTTSCEEEEEEEET----TTC
T ss_pred CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccc-cccccCCCCEEEEEEC----CCC
Confidence 57899999776554432 11 00000 00 00011222233577777765321 0111112456888884 467
Q ss_pred EEEEEeecCCCceeEEEEEecCCe-EEEE-e-cCCeEEEEECCCCeEE-Ee-eec
Q 048458 321 INLFTVDLRAQFAWQYLGFGANDE-VMLR-N-DDGELVLYDHKTQEVV-QC-ESS 370 (386)
Q Consensus 321 ~~~~~i~~~~~~~~~~~~~~~~g~-i~l~-~-~~~~l~~ydl~~~~~~-~v-~~~ 370 (386)
..+.+|+.... . .-+++.+||+ .++. + .++.+.++|+++.+.. .+ ..+
T Consensus 361 kvv~~I~vg~~-P-~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG 413 (426)
T 3c75_H 361 ERINKIELGHE-I-DSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLG 413 (426)
T ss_dssp CEEEEEEEEEE-E-CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCS
T ss_pred eEEEEEECCCC-c-CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCC
Confidence 78888875441 1 3456677776 5544 4 2567999999999964 44 443
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=64.35 E-value=69 Score=27.55 Aligned_cols=135 Identities=13% Similarity=0.156 Sum_probs=70.9
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeee-ecCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRY-RKLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~ 271 (386)
...+.+|+.+++.-...-..... .-..+.+ +|.....+.. + +.|..+|+.+..... +..+.
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~-d------g~i~~~d~~~~~~~~~~~~~~---- 225 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTD-----GASCIDISNDGTKLWTGGL-D------NTVRSWDLREGRQLQQHDFTS---- 225 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEET-T------SEEEEEETTTTEEEEEEECSS----
T ss_pred CCcEEEEeCCCCceeeeeecccC-----ceEEEEECCCCCEEEEEec-C------CcEEEEECCCCceEeeecCCC----
Confidence 34588888877643221101000 0012222 5655554443 2 689999998765433 23221
Q ss_pred CCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-Ee
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RN 349 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~ 349 (386)
....+.-. +|++.++.... ..+.+|.++.. +. ..+... .....-+.+.+++..++ ..
T Consensus 226 -----~v~~~~~s~~~~~l~~~~~~--------~~i~~~~~~~~---~~----~~~~~~-~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 226 -----QIFSLGYCPTGEWLAVGMES--------SNVEVLHVNKP---DK----YQLHLH-ESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp -----CEEEEEECTTSSEEEEEETT--------SCEEEEETTSS---CE----EEECCC-SSCEEEEEECTTSSEEEEEE
T ss_pred -----ceEEEEECCCCCEEEEEcCC--------CcEEEEECCCC---Ce----EEEcCC-ccceeEEEECCCCCEEEEec
Confidence 11222222 56665555433 47999988742 11 112111 11225667777776544 44
Q ss_pred cCCeEEEEECCCCeEEE
Q 048458 350 DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 350 ~~~~l~~ydl~~~~~~~ 366 (386)
.++.+..||+++++...
T Consensus 285 ~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 285 KDNLLNAWRTPYGASIF 301 (337)
T ss_dssp TTSEEEEEETTTCCEEE
T ss_pred CCCcEEEEECCCCeEEE
Confidence 56779999999887653
No 139
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.20 E-value=33 Score=30.01 Aligned_cols=109 Identities=4% Similarity=-0.067 Sum_probs=57.0
Q ss_pred CC-eEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NG-AVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G-~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
+| .+||.... . +.|..+|.. ...+.+..|... -..++.. +|+|.+..... ..+.
T Consensus 55 ~g~~l~~~d~~-~------~~i~~~~~~-g~~~~~~~~~~~--------~~gl~~d~dG~l~v~~~~~--------~~v~ 110 (305)
T 3dr2_A 55 AQRTLVWSDLV-G------RRVLGWRED-GTVDVLLDATAF--------TNGNAVDAQQRLVHCEHGR--------RAIT 110 (305)
T ss_dssp GGTEEEEEETT-T------TEEEEEETT-SCEEEEEESCSC--------EEEEEECTTSCEEEEETTT--------TEEE
T ss_pred CCCEEEEEECC-C------CEEEEEeCC-CCEEEEeCCCCc--------cceeeECCCCCEEEEECCC--------CEEE
Confidence 45 48998655 2 678999985 445555443321 1223333 68876554322 2444
Q ss_pred EEEEeecCCCcceEEEEEeecCC-CceeEEEEEecCCeEEEEe------------------cCCeEEEEECCCCeEEEe
Q 048458 308 VYVMKENIEVEHWINLFTVDLRA-QFAWQYLGFGANDEVMLRN------------------DDGELVLYDHKTQEVVQC 367 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~g~i~l~~------------------~~~~l~~ydl~~~~~~~v 367 (386)
+|..+ .+........... .....-++++++|.+++.. ....++.||+++++++.+
T Consensus 111 ~~~~~-----g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 111 RSDAD-----GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp EECTT-----SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred EECCC-----CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 43322 2233222111000 0000336777888888842 124599999988877654
No 140
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=63.91 E-value=1.2e+02 Score=30.11 Aligned_cols=146 Identities=11% Similarity=-0.050 Sum_probs=76.5
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCce---eeeecCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDET---FRYRKLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~---~~~i~~P~~~~~ 271 (386)
...+.+++..++.|+.+.... . ....++.-+|.+|..+.. + .....|..+|+.+.. |+.+-.+...
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~--~---~~~~~~~~~g~l~~~s~~-~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~-- 319 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGV--G---AKYEVHAWKDRFYVLTDE-G---APRQRVFEVDPAKPARASWKEIVPEDSS-- 319 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECS--S---CCEEEEEETTEEEEEECT-T---CTTCEEEEEBTTBCSGGGCEEEECCCSS--
T ss_pred ceEEEEEcCCCCceEEeecCC--C---ceEEEEecCCcEEEEECC-C---CCCCEEEEEeCCCCCccCCeEEecCCCC--
Confidence 345666666666777665111 1 112244567775554432 1 123789999997654 5555322211
Q ss_pred CCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEec
Q 048458 272 TDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRND 350 (386)
Q Consensus 272 ~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~~ 350 (386)
..-..+...+|+|.+..... ....||+++-.+ + ...++..........++..+++ .+++...
T Consensus 320 ----~~l~~~~~~~~~lv~~~~~d--------g~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 320 ----ASLLSVSIVGGHLSLEYLKD--------ATSEVRVATLKG--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp ----CEEEEEEEETTEEEEEEEET--------TEEEEEEEETTC--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred ----CeEEEEEEECCEEEEEEEEC--------CEEEEEEEeCCC--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 11222334488887776655 478889887322 1 2334443321111122333455 4554432
Q ss_pred ----CCeEEEEECCCCeEEEee
Q 048458 351 ----DGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 351 ----~~~l~~ydl~~~~~~~v~ 368 (386)
...++.||+++++.+.+.
T Consensus 383 s~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 383 SFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp ETTEEEEEEEEETTTCCEEEEE
T ss_pred CCCCCCEEEEEECCCCcEEEEe
Confidence 135999999998876664
No 141
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=63.77 E-value=49 Score=28.50 Aligned_cols=112 Identities=8% Similarity=0.043 Sum_probs=58.4
Q ss_pred CCeEEEE-------EEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-C-CeEEEEEeeCCCCCC
Q 048458 230 NGAVHWM-------AIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-E-KSIALFVSCHTEDNT 300 (386)
Q Consensus 230 ~G~lywl-------~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~-G~L~lv~~~~~~~~~ 300 (386)
+|.+|+. ... . +.|..+|+.+.++..+..|...... ..-..++.. + |+|.+... .
T Consensus 28 ~g~l~~~~~~~~~~~~~-~------~~i~~~d~~~g~~~~~~~~~~~~~~---~~~~~i~~~~~~g~l~v~~~--~---- 91 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKP-A------GEILRIDLKTGKKTVICKPEVNGYG---GIPAGCQCDRDANQLFVADM--R---- 91 (314)
T ss_dssp TSCEEEEETTCEETTEE-C------CEEEEECTTTCCEEEEECCEETTEE---CCEEEEEECSSSSEEEEEET--T----
T ss_pred CCCEEEEEeccccCCCC-C------CEEEEEeCCCCcEEEEEecccCCCC---CCCceEEEecCCCcEEEEEC--C----
Confidence 6788877 233 1 6899999988888776543211000 122233333 5 78777654 2
Q ss_pred CCCCEEEEEEEeecCCCcceEEE-EEeecCCCce-eEEEEEecCCeEEEEecC----------------CeEEEEECCCC
Q 048458 301 AGLGICSVYVMKENIEVEHWINL-FTVDLRAQFA-WQYLGFGANDEVMLRNDD----------------GELVLYDHKTQ 362 (386)
Q Consensus 301 ~~~~~i~iW~l~~~~~~~~W~~~-~~i~~~~~~~-~~~~~~~~~g~i~l~~~~----------------~~l~~ydl~~~ 362 (386)
.. |++++.. .+.... .......... ..-++++++|.+++.... ..++.||++ +
T Consensus 92 ---~~--l~~~d~~---g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 92 ---LG--LLVVQTD---GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp ---TE--EEEEETT---SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred ---CC--EEEEeCC---CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 23 4444421 122211 1100001111 145677778888887642 469999987 5
Q ss_pred eEEE
Q 048458 363 EVVQ 366 (386)
Q Consensus 363 ~~~~ 366 (386)
+.+.
T Consensus 163 ~~~~ 166 (314)
T 1pjx_A 163 QMIQ 166 (314)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 5544
No 142
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=63.25 E-value=1.1e+02 Score=29.28 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=35.0
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCC--ceeEEEEEecC-CeEEE-EecCCeEEEEECCCCeEE
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQ--FAWQYLGFGAN-DEVML-RNDDGELVLYDHKTQEVV 365 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~~-g~i~l-~~~~~~l~~ydl~~~~~~ 365 (386)
..+.+|.++. .....++..... ....-+++.++ +..++ ...++.+..||+++++..
T Consensus 183 ~~v~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 183 GSVVFYQGPP------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp TEEEEEETTT------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred CcEEEEeCCC------cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 5899997653 344444442221 02356777777 76555 455677999999887743
No 143
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=63.07 E-value=79 Score=27.78 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=57.8
Q ss_pred eEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEe-C-CeEEEEEeeCCCCCCCCCCEEEEEEEeecC--CCcceEE
Q 048458 248 DIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGIL-E-KSIALFVSCHTEDNTAGLGICSVYVMKENI--EVEHWIN 322 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~-~-G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~--~~~~W~~ 322 (386)
+.|..+|..++.+..+ .+.... .....+.-. + +...++....+ .++.||.+.... ....|..
T Consensus 175 ~~i~iW~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~~l~s~s~D-------~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAVLNGHE------GTVWSSDFDKTEGVFRLCSGSDD-------STVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp SCEEEEEEETTEEEEEEEECCCS------SCEEEEEECCSSSSCEEEEEETT-------SCEEEEEEEEECTTSCEEEEE
T ss_pred CeEEEEECCCCCeeEEEEccCCC------CcEEEEEecCCCCeeEEEEEeCC-------CeEEEEEecCCCccccceeEE
Confidence 5688888877655443 222111 111222222 2 23345555555 689999887431 2245766
Q ss_pred EEEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEEe
Q 048458 323 LFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQC 367 (386)
Q Consensus 323 ~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~v 367 (386)
...+..........+++.+++.++....++.+..||.++++++.+
T Consensus 242 ~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 242 EAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp EEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred eeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEE
Confidence 655542111122445555555555555667799999988876554
No 144
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=62.96 E-value=1.3e+02 Score=30.35 Aligned_cols=149 Identities=9% Similarity=0.084 Sum_probs=78.0
Q ss_pred eEEEEEcCCCceeecCCCCCC---ccccCCCceEEEC--CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCC
Q 048458 197 DIQVYSLKNNCWRRIQPNVPC---IPCLSSNSTVHLN--GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYN 271 (386)
Q Consensus 197 ~~~vyss~~~~W~~~~~~~p~---~~~~~~~~~v~~~--G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~ 271 (386)
.+.+|+..++.++... ..+. ......-.+++.| |. .|++.. + +.|..+|..+..|+.+........
T Consensus 283 Gl~~~~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~-~------~Gl~~~~~~~~~~~~~~~~~~~~~ 353 (795)
T 4a2l_A 283 DLNIYHEGTDSFASYS-SNPVENGSLSQRSVRSIFMDSQGG-MWLGTY-F------GGLNYYHPIRNRFKNIRNIPYKNS 353 (795)
T ss_dssp CEEEEETTTTEEEEEC-CCTTSTTSCSSSCEEEEEECTTSC-EEEEES-S------SCEEEECGGGGSSEEECCCTTSSS
T ss_pred hhheEcCCCCeEEEEe-cCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC-C------CCeEEeCCCcccceEEcCCCCCCC
Confidence 5778888888887665 2111 1111111134443 44 577765 3 679999999888877643221110
Q ss_pred CCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEee---c--CCCceeEEEEEecCCe-
Q 048458 272 TDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVD---L--RAQFAWQYLGFGANDE- 344 (386)
Q Consensus 272 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~---~--~~~~~~~~~~~~~~g~- 344 (386)
.. ......+.+. +|.|.+-+... .+.. ++.. ...+.....-. . ........++.+.+|.
T Consensus 354 l~-~~~V~~i~~d~~g~lWiGt~~~---------Gl~~--~~~~--~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~ 419 (795)
T 4a2l_A 354 LS-DNVVSCIVEDKDKNLWIGTNDG---------GLNL--YNPI--TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSL 419 (795)
T ss_dssp CS-CSSEEEEEECTTSCEEEEESSS---------CEEE--ECTT--TCCEEEECCC------CCSCSCEEEEEEETTTTE
T ss_pred CC-CCeeEEEEECCCCCEEEEECCC---------CeEE--EcCC--CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCE
Confidence 00 0233444444 56766643321 3333 3321 12343321100 0 0011114455666788
Q ss_pred EEEEecCCeEEEEECCCCeEEEee
Q 048458 345 VMLRNDDGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 345 i~l~~~~~~l~~ydl~~~~~~~v~ 368 (386)
+++.+..+.|+.||.++++++.+.
T Consensus 420 lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEC
T ss_pred EEEEeCcCceeEEeCCCCcEEEee
Confidence 888887667999999998887654
No 145
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=62.91 E-value=75 Score=27.46 Aligned_cols=146 Identities=5% Similarity=0.018 Sum_probs=70.8
Q ss_pred cceEEEEEcCCC--ceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNN--CWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~--~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 272 (386)
...+.+++.+++ .|+.-.... . ......+.-+|.++. +.. ..|.+||...+....+..|...
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~-~---~~~~~~~~pdG~ilv-s~~--------~~V~~~d~~G~~~W~~~~~~~~--- 77 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG-W---ECNSVAATKAGEILF-SYS--------KGAKMITRDGRELWNIAAPAGC--- 77 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT-C---CCCEEEECTTSCEEE-ECB--------SEEEEECTTSCEEEEEECCTTC---
T ss_pred CCEEEEEECCCCeEEEEeCCCcc-C---CCcCeEECCCCCEEE-eCC--------CCEEEECCCCCEEEEEcCCCCc---
Confidence 445667776554 466443110 0 011112334787766 333 5799999954444445554221
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCc-eeEEEEEecCCeEEEEe-c
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQF-AWQYLGFGANDEVMLRN-D 350 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~-~~~~~~~~~~g~i~l~~-~ 350 (386)
.....-..-+|++.++..... -.|+.++..+ +.-|.....-...... ....+....+|.+++.. .
T Consensus 78 ---~~~~~~~~~dG~~lv~~~~~~---------~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 78 ---EMQTARILPDGNALVAWCGHP---------STILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp ---EEEEEEECTTSCEEEEEESTT---------EEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT
T ss_pred ---cccccEECCCCCEEEEecCCC---------CEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecC
Confidence 111111233677766654312 3456666422 2334432211111111 11234456677766654 4
Q ss_pred CCeEEEEECCCCeEEEeee
Q 048458 351 DGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 351 ~~~l~~ydl~~~~~~~v~~ 369 (386)
++.++.||++.+.+-+...
T Consensus 145 ~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp TTEEEEECTTSCEEEEEEC
T ss_pred CCEEEEECCCCCEEEEEEC
Confidence 5679999999555545554
No 146
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=62.57 E-value=88 Score=28.14 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=53.7
Q ss_pred eEEEEEECCCceeee-e--cCCCCCCCCCCccceeEEEE--eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEE
Q 048458 248 DIIVSFDFGDETFRY-R--KLPDCLYNTDHIHRERSIGI--LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWIN 322 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i--~~P~~~~~~~~~~~~~~L~~--~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~ 322 (386)
+.|..+|+.+..... + ..|.... .....+.. .++.+.+.+... .++.+|-+...+ . .
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~~~--~---~ 241 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHT-----ADVLSLSINSLNANMFISGSCD--------TTVRLWDLRITS--R---A 241 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCC-----SCEEEEEECSSSCCEEEEEETT--------SCEEEEETTTTC--C---C
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCc-----cCeEEEEeecCCCCEEEEEECC--------CeEEEEECCCCC--c---c
Confidence 678999998765433 2 2222211 12222222 256666655544 589999876321 1 1
Q ss_pred EEEeecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeEEE
Q 048458 323 LFTVDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 323 ~~~i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~~~ 366 (386)
+.++... .....-+++.+++..++. ..++.+..||+++++...
T Consensus 242 ~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 242 VRTYHGH-EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp CEEECCC-SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred eEEECCc-CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 1112111 111145667777765554 445679999999877543
No 147
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=62.40 E-value=1e+02 Score=28.78 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=62.4
Q ss_pred eEEEC----CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCe-EEEEEeeCCCCC
Q 048458 226 TVHLN----GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKS-IALFVSCHTEDN 299 (386)
Q Consensus 226 ~v~~~----G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~-L~lv~~~~~~~~ 299 (386)
.+.++ |.||+.... ..|..||+.+.....+.-+ . ..-..++.. +|+ |++......
T Consensus 141 ~lavdp~~~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~~--~------~~P~~ia~d~~G~~lyvad~~~~--- 201 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQ--------HPTRLIDFEKEYVSTVYSG--L------SKVRTICWTHEADSMIITNDQNN--- 201 (430)
T ss_dssp EEEEETTEEEEEEEEEBT--------EEEEEEETTTTEEEEEECC--C------SCEEEEEECTTSSEEEEEECCSC---
T ss_pred EEEECCCCCCeEEEEeCC--------CcEEEEECCCCEEEEEecC--C------CCcceEEEeCCCCEEEEEeCCCC---
Confidence 45544 788877543 6899999999877666321 1 112233333 455 666654322
Q ss_pred CCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEec-CCeEEEEec-CCeEEEEECCCCeEEE
Q 048458 300 TAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA-NDEVMLRND-DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 300 ~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~-~g~i~l~~~-~~~l~~ydl~~~~~~~ 366 (386)
......+|...+ ..|.....+..... . .-+++++ +|.||+... .++++.||+++++...
T Consensus 202 --~~~~~v~~~~~~----g~~~~~~~l~~~~~-p-~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 202 --NDRPNNYILTRE----SGFKVITELTKGQN-C-NGAETHPINGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp --TTSEEEEEEEGG----GTSCSEEEEEECSS-C-CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred --cccceEEEEeCC----CceeeeeeeccCCC-c-eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 112333444332 23432222321111 1 3456777 678888654 4679999999887733
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=62.16 E-value=65 Score=28.01 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=50.9
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.+. ..++.+.... .. .++. -+|+..++..... ..+.+|-++. . ....+
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~-----~~--~~~~s~dg~~~~v~~~~~-------~~i~~~d~~t----~--~~~~~ 80 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFG-----PG--TAMMAPDNRTAYVLNNHY-------GDIYGIDLDT----C--KNTFH 80 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCS-----SC--EEEECTTSSEEEEEETTT-------TEEEEEETTT----T--EEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCC-----Cc--eeEECCCCCEEEEEeCCC-------CcEEEEeCCC----C--cEEEE
Confidence 6899999988765 3456554111 11 2222 2566444444333 5777776552 2 22233
Q ss_pred eecCCC----ce-eEEEEEecCCe-EEEEec------------CCeEEEEECCCCe
Q 048458 326 VDLRAQ----FA-WQYLGFGANDE-VMLRND------------DGELVLYDHKTQE 363 (386)
Q Consensus 326 i~~~~~----~~-~~~~~~~~~g~-i~l~~~------------~~~l~~ydl~~~~ 363 (386)
+..... .. ...+++.++|+ +++... ...+..||+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 333221 00 13456777775 554442 2679999998844
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=60.98 E-value=72 Score=26.63 Aligned_cols=145 Identities=8% Similarity=-0.016 Sum_probs=71.5
Q ss_pred eEEEEEcCC-CceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCc
Q 048458 197 DIQVYSLKN-NCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHI 275 (386)
Q Consensus 197 ~~~vyss~~-~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 275 (386)
.+.+|+..+ +..+.+. ..... .........-+|.....+.. .. .....|..+|..+.....+.....
T Consensus 63 ~i~~~d~~~~~~~~~~~-~~~~~-~~~~~~~~spdg~~l~~~~~-~~--~~~~~l~~~~~~~~~~~~~~~~~~------- 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVD-TGFAT-ICNNDHGISPDGALYAISDK-VE--FGKSAIYLLPSTGGTPRLMTKNLP------- 130 (297)
T ss_dssp EEEEEESSSCCSCEECC-CTTCC-CBCSCCEECTTSSEEEEEEC-TT--TSSCEEEEEETTCCCCEECCSSSS-------
T ss_pred eEEEEeCCCCCCceEec-ccccc-ccccceEECCCCCEEEEEEe-CC--CCcceEEEEECCCCceEEeecCCC-------
Confidence 688899888 7665444 11110 01111122336654444442 11 123688889988766554432211
Q ss_pred cceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEec-C-
Q 048458 276 HRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRND-D- 351 (386)
Q Consensus 276 ~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~-~- 351 (386)
...+.-. +|+..++....+ ..+.||.++..+ .... .+.... .....+.+.++|. +++... +
T Consensus 131 --~~~~~~spdg~~l~~~~~~~-------~~~~l~~~~~~~--~~~~---~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 131 --SYWHGWSPDGKSFTYCGIRD-------QVFDIYSMDIDS--GVET---RLTHGE-GRNDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp --EEEEEECTTSSEEEEEEEET-------TEEEEEEEETTT--CCEE---ECCCSS-SCEEEEEECTTSSEEEEEECTTS
T ss_pred --ccceEECCCCCEEEEEECCC-------CceEEEEEECCC--Ccce---EcccCC-CccccceECCCCCEEEEEecCCC
Confidence 1112222 566555444344 478999987422 2221 111111 1124556667775 444432 2
Q ss_pred -CeEEEEECCCCeEEEee
Q 048458 352 -GELVLYDHKTQEVVQCE 368 (386)
Q Consensus 352 -~~l~~ydl~~~~~~~v~ 368 (386)
.+++.+++.+++.+.+.
T Consensus 196 ~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 196 QMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp SCEEEEEETTSSCEEECC
T ss_pred CccEEEECCCCCCcEEEe
Confidence 34777777777766554
No 150
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=60.42 E-value=1.8e+02 Score=30.98 Aligned_cols=98 Identities=8% Similarity=0.209 Sum_probs=51.6
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+......-. ... .....+.-. +|++.+.+.. + ..+.+|.+... . ...++
T Consensus 723 ~~v~vwd~~~~~~~~~~~-~h~------~~v~~~~~sp~~~~l~s~s~-d-------g~v~vwd~~~~----~--~~~~~ 781 (1249)
T 3sfz_A 723 FFLKLWDLNQKECRNTMF-GHT------NSVNHCRFSPDDELLASCSA-D-------GTLRLWDVRSA----N--ERKSI 781 (1249)
T ss_dssp SCEEEEETTSSSEEEEEC-CCS------SCEEEEEECSSTTEEEEEES-S-------SEEEEEEGGGT----E--EEEEE
T ss_pred CeEEEEECCCcchhheec-CCC------CCEEEEEEecCCCEEEEEEC-C-------CeEEEEeCCCC----c--cccee
Confidence 679999998775433211 111 122222222 5665555443 3 58999988742 1 11122
Q ss_pred ecCC------------CceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEE
Q 048458 327 DLRA------------QFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 327 ~~~~------------~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~ 366 (386)
.... ......+++.++|..++...++.+..||+.++....
T Consensus 782 ~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLA 833 (1249)
T ss_dssp ECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEE
T ss_pred cccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCcee
Confidence 2111 001133455667766655556778999988877543
No 151
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=59.99 E-value=97 Score=27.79 Aligned_cols=77 Identities=8% Similarity=0.028 Sum_probs=35.9
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+...+.. + +.|..+|+.+.+.....+..+. ..-..++-. +|++.+ ....+ .++.|
T Consensus 280 dg~~lasgs~-D------~~V~iwd~~~~~~~~~~~~gH~------~~V~~v~fSpdg~~la-S~S~D-------~tvrv 338 (365)
T 4h5i_A 280 KGELAVLASN-D------NSIALVKLKDLSMSKIFKQAHS------FAITEVTISPDSTYVA-SVSAA-------NTIHI 338 (365)
T ss_dssp TSCEEEEEET-T------SCEEEEETTTTEEEEEETTSSS------SCEEEEEECTTSCEEE-EEETT-------SEEEE
T ss_pred CCCceEEEcC-C------CEEEEEECCCCcEEEEecCccc------CCEEEEEECCCCCEEE-EEeCC-------CeEEE
Confidence 6766555544 3 6799999988654322111111 122233333 676544 44455 69999
Q ss_pred EEEeec-C-CCcceEEEEEee
Q 048458 309 YVMKEN-I-EVEHWINLFTVD 327 (386)
Q Consensus 309 W~l~~~-~-~~~~W~~~~~i~ 327 (386)
|.+.+. . ...-|.++..+.
T Consensus 339 w~ip~~~~~~~s~~~~l~kl~ 359 (365)
T 4h5i_A 339 IKLPLNYANYTSMKQKISKLE 359 (365)
T ss_dssp EECCTTTTC------------
T ss_pred EEcCCCCcCccCccccceeee
Confidence 998643 1 223466655554
No 152
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=59.35 E-value=1.4e+02 Score=30.12 Aligned_cols=96 Identities=13% Similarity=0.218 Sum_probs=56.4
Q ss_pred eEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEe-C--CeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEE
Q 048458 248 DIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGIL-E--KSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINL 323 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~-~--G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~ 323 (386)
+.|..+|+.++....+ .+.... .....+.-. + |.+.+.+... ..+.+|.++. ..|...
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~------~~V~~l~~s~~~~~~~l~s~s~D--------g~I~vwd~~~----~~~~~~ 92 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHE------GPVWRVDWAHPKFGTILASCSYD--------GKVLIWKEEN----GRWSQI 92 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCS------SCEEEEEECCTTSCSEEEEEETT--------SCEEEEEEET----TEEEEE
T ss_pred CcEEEEecCCCCCccceeccCCc------CceEEEEecCCCCCCEEEEEeCC--------CeEEEEECCC----Cccccc
Confidence 6888999886666554 222221 122233322 2 6665555544 5899999885 456666
Q ss_pred EEeecCCCceeEEEEEecC--CeEE-EEecCCeEEEEECCCC
Q 048458 324 FTVDLRAQFAWQYLGFGAN--DEVM-LRNDDGELVLYDHKTQ 362 (386)
Q Consensus 324 ~~i~~~~~~~~~~~~~~~~--g~i~-l~~~~~~l~~ydl~~~ 362 (386)
..+.... .....+++.++ +.++ ....++.+..||++++
T Consensus 93 ~~~~~h~-~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 93 AVHAVHS-ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEECCCS-SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ccccCCC-CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 5554322 12255666665 6544 4455678999999887
No 153
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=58.60 E-value=93 Score=27.13 Aligned_cols=94 Identities=6% Similarity=0.078 Sum_probs=53.1
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+......- .... .....+... +|++.+.+.. + ..+.||-+.. -..+.++
T Consensus 176 ~~i~~wd~~~~~~~~~~-~~h~------~~v~~~~~sp~g~~l~s~~~-d-------g~i~iwd~~~------~~~~~~~ 234 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADF-IGHN------SNINTLTASPDGTLIASAGK-D-------GEIMLWNLAA------KKAMYTL 234 (319)
T ss_dssp SCEEEEETTTTEEEEEE-CCCC------SCEEEEEECTTSSEEEEEET-T-------CEEEEEETTT------TEEEEEE
T ss_pred CEEEEEECCcchhheee-cCCC------CcEEEEEEcCCCCEEEEEeC-C-------CeEEEEECCC------CcEEEEe
Confidence 67889999876543221 1111 122233333 5665555543 3 5899998864 1233444
Q ss_pred ecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeE
Q 048458 327 DLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEV 364 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~ 364 (386)
.... ...-+++.+++..+....+..+..|+++++..
T Consensus 235 ~~~~--~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~ 270 (319)
T 3frx_A 235 SAQD--EVFSLAFSPNRYWLAAATATGIKVFSLDPQYL 270 (319)
T ss_dssp ECCS--CEEEEEECSSSSEEEEEETTEEEEEEETTEEE
T ss_pred cCCC--cEEEEEEcCCCCEEEEEcCCCcEEEEeCcCee
Confidence 4322 22567777777766655555678888777654
No 154
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=58.58 E-value=93 Score=27.10 Aligned_cols=63 Identities=8% Similarity=0.186 Sum_probs=35.6
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-EecCCeEEEEECC-CCeEEEeee
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RNDDGELVLYDHK-TQEVVQCES 369 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~-~~~~~~v~~ 369 (386)
.++.||.+++.. ...|.....-... ....-+++.+++.++. ...++.+..|+.. .++|+.+..
T Consensus 238 ~~v~iw~~~~~~-~~~~~~~~~~~~~--~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 238 GRVFIWTCDDAS-SNTWSPKLLHKFN--DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISD 302 (316)
T ss_dssp CEEEEEECSSTT-CCCCBCCEEEECS--SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEE
T ss_pred CeEEEEEccCcc-ccchhhhhhhcCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeee
Confidence 599999987521 1234321111111 1114567778776554 4456678899875 456776653
No 155
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=58.54 E-value=1.1e+02 Score=28.11 Aligned_cols=111 Identities=10% Similarity=-0.035 Sum_probs=60.9
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeec-CCCCCCCCCCccce-e-EEEEe--CCeEEEEEeeCCCCCCCCCC
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRK-LPDCLYNTDHIHRE-R-SIGIL--EKSIALFVSCHTEDNTAGLG 304 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~-~P~~~~~~~~~~~~-~-~L~~~--~G~L~lv~~~~~~~~~~~~~ 304 (386)
+|.+|+ +.. . +.|..+|+.+.....+. .+..... ... . .++.. +|.|++..... .
T Consensus 230 ~g~lyv-~d~-~------~~I~~~d~~~~~~~~~~~~~~~g~~----~~~P~~~ia~~p~~g~lyv~d~~~--------~ 289 (409)
T 3hrp_A 230 EEWLYF-VDS-N------KNFGRFNVKTQEVTLIKQLELSGSL----GTNPGPYLIYYFVDSNFYMSDQNL--------S 289 (409)
T ss_dssp SSEEEE-ECT-T------CEEEEEETTTCCEEEEEECCCCSCC----CCSSCCEEEEETTTTEEEEEETTT--------T
T ss_pred CCeEEE-EEC-C------CcEEEEECCCCCEEEEecccccCCC----CCCccccEEEeCCCCEEEEEeCCC--------C
Confidence 688998 322 1 68999999877665551 1111010 111 1 45544 57887765433 3
Q ss_pred EEEEEEEeecCCCcceEEEEEeecC------------CCcee-EEEEEecCCeEEEEec--CCeEEEEECCCCeEEEe
Q 048458 305 ICSVYVMKENIEVEHWINLFTVDLR------------AQFAW-QYLGFGANDEVMLRND--DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 305 ~i~iW~l~~~~~~~~W~~~~~i~~~------------~~~~~-~~~~~~~~g~i~l~~~--~~~l~~ydl~~~~~~~v 367 (386)
. |++++..+ .-... .... ..+.+ .-++++++|.+|+... +.++..+|+.++++..+
T Consensus 290 ~--I~~~~~~g---~~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 290 S--VYKITPDG---ECEWF--CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp E--EEEECTTC---CEEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred E--EEEEecCC---CEEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 4 45555322 11111 1111 00111 4567778888888764 45699999888887665
No 156
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=58.05 E-value=1.1e+02 Score=27.98 Aligned_cols=144 Identities=13% Similarity=0.102 Sum_probs=73.1
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCe-EEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGA-VHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTD 273 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 273 (386)
...+.+++..++.-+.+. ..+... ......-||. +.+.... + ....|..+|+.+.....+.-..
T Consensus 202 ~~~i~~~d~~tg~~~~l~-~~~~~~---~~~~~spdg~~la~~~~~-~----g~~~i~~~d~~~~~~~~l~~~~------ 266 (415)
T 2hqs_A 202 RSALVIQTLANGAVRQVA-SFPRHN---GAPAFSPDGSKLAFALSK-T----GSLNLYVMDLASGQIRQVTDGR------ 266 (415)
T ss_dssp SCEEEEEETTTCCEEEEE-CCSSCE---EEEEECTTSSEEEEEECT-T----SSCEEEEEETTTCCEEECCCCS------
T ss_pred CcEEEEEECCCCcEEEee-cCCCcc---cCEEEcCCCCEEEEEEec-C----CCceEEEEECCCCCEEeCcCCC------
Confidence 467899999888765544 221110 0001112565 4444332 1 1257999999887765442111
Q ss_pred CccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEEecC
Q 048458 274 HIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRNDD 351 (386)
Q Consensus 274 ~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~~ 351 (386)
.....+.- -+|+..++..... ....||.++-.+ .. ..++.... ....-+++.++|+ |++...+
T Consensus 267 --~~~~~~~~spdg~~l~~~s~~~-------g~~~i~~~d~~~--~~---~~~l~~~~-~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 267 --SNNTEPTWFPDSQNLAFTSDQA-------GRPQVYKVNING--GA---PQRITWEG-SQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp --SCEEEEEECTTSSEEEEEECTT-------SSCEEEEEETTS--SC---CEECCCSS-SEEEEEEECTTSSEEEEEEEC
T ss_pred --CcccceEECCCCCEEEEEECCC-------CCcEEEEEECCC--CC---EEEEecCC-CcccCeEECCCCCEEEEEECc
Confidence 11112222 2676555554433 345677776322 11 11222111 1114456677885 4444432
Q ss_pred ---CeEEEEECCCCeEEEee
Q 048458 352 ---GELVLYDHKTQEVVQCE 368 (386)
Q Consensus 352 ---~~l~~ydl~~~~~~~v~ 368 (386)
..++.+|+++++.+.+.
T Consensus 332 ~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp SSCEEEEEEETTTCCEEECC
T ss_pred CCceEEEEEECCCCCEEEec
Confidence 36999999999886653
No 157
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=57.97 E-value=1e+02 Score=27.40 Aligned_cols=63 Identities=13% Similarity=0.235 Sum_probs=36.7
Q ss_pred EEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeec---C--CCceeEEEEEecCCeEEEE-ecC---CeEEEEEC
Q 048458 289 ALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDL---R--AQFAWQYLGFGANDEVMLR-NDD---GELVLYDH 359 (386)
Q Consensus 289 ~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~---~--~~~~~~~~~~~~~g~i~l~-~~~---~~l~~ydl 359 (386)
.++....+ ..+.+|.+.. . ..+..+.. . ......-+++.+++.+++. ..+ +.+..||+
T Consensus 199 ~l~~~~~d-------g~i~i~d~~~----~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 199 LIATGFNN-------GTVQISELST----L--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp EEEEECTT-------SEEEEEETTT----T--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred eEEEEeCC-------CcEEEEECCC----C--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 55555555 6899998874 1 23333433 1 0112256667777765554 444 67999999
Q ss_pred CCCeE
Q 048458 360 KTQEV 364 (386)
Q Consensus 360 ~~~~~ 364 (386)
++++.
T Consensus 266 ~~~~~ 270 (397)
T 1sq9_A 266 EFGER 270 (397)
T ss_dssp TTCCE
T ss_pred CCCcc
Confidence 88764
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=57.90 E-value=1e+02 Score=27.27 Aligned_cols=73 Identities=7% Similarity=0.094 Sum_probs=43.8
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCC--ceeEEEEEecCCe-EEEEecC--CeEEEEEC
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQ--FAWQYLGFGANDE-VMLRNDD--GELVLYDH 359 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~~g~-i~l~~~~--~~l~~ydl 359 (386)
+|+..++..... ..+.+|.++. .......++..... ..-.-++++++|+ +++.... ..+.+|++
T Consensus 221 dg~~l~v~~~~~-------~~v~v~~~~~----g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 221 DGKFAYLINEIG-------GTVIAFRYAD----GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp TSSEEEEEETTT-------CEEEEEEEET----TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred CCCEEEEEcCCC-------CeEEEEEecC----CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 676555554344 6899999883 34555555554321 1115677888886 5555544 56888777
Q ss_pred C--CCeEEEee
Q 048458 360 K--TQEVVQCE 368 (386)
Q Consensus 360 ~--~~~~~~v~ 368 (386)
+ +++++.+.
T Consensus 290 ~~~~g~~~~~~ 300 (361)
T 3scy_A 290 DETNGTLTKVG 300 (361)
T ss_dssp CTTTCCEEEEE
T ss_pred cCCCCcEEEee
Confidence 4 66765553
No 159
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=56.44 E-value=1.1e+02 Score=27.42 Aligned_cols=99 Identities=9% Similarity=0.070 Sum_probs=50.0
Q ss_pred eEEEEEECCCcee--eeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEE--
Q 048458 248 DIIVSFDFGDETF--RYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINL-- 323 (386)
Q Consensus 248 ~~il~fD~~~~~~--~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~-- 323 (386)
+.|..+|+.+... ..+..... .....+...+|++.+... .+ ..+.+|.+.+......-...
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~l~s~~-~d-------~~v~iw~~~~~~~~~~~~~~~~ 377 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG-------TPINNVYFAAGALFVSSG-FD-------TSIKLDIISDPESERPAIEFET 377 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT-------SCEEEEEEETTEEEEEET-TT-------EEEEEEEECCTTCCSCEECTTS
T ss_pred CeEEEEEcCCCcCchhhhhccCC-------CCceEEEeCCCCEEEEec-CC-------ccEEEEeccCCCCCccceeccC
Confidence 7899999987532 22221111 122233444777544444 44 58999999863211110000
Q ss_pred EEeecCCCceeEEEEEecCCe----EEEEecCCeEEEEECCC
Q 048458 324 FTVDLRAQFAWQYLGFGANDE----VMLRNDDGELVLYDHKT 361 (386)
Q Consensus 324 ~~i~~~~~~~~~~~~~~~~g~----i~l~~~~~~l~~ydl~~ 361 (386)
...-........-+++.+++. ++.....+.+..|+++.
T Consensus 378 ~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 378 PTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 000000011114455666554 66666667788898875
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=55.94 E-value=1.4e+02 Score=28.51 Aligned_cols=140 Identities=9% Similarity=0.021 Sum_probs=67.6
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCc
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHI 275 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 275 (386)
..+.+++..++.++.+. ...... ......=||...+.... + ....|..+|+++.....+.-..... ....
T Consensus 175 ~~i~~~d~~~g~~~~l~-~~~~~~---~~~~~SpDG~~l~~~~~-~----~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~ 244 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFD-SGEGSF---SSASISPGMKVTAGLET-A----REARLVTVDPRDGSVEDLELPSKDF-SSYR 244 (582)
T ss_dssp EEEEEEETTTCCCEEEC-CSSCEE---EEEEECTTSCEEEEEEC-S----SCEEEEEECTTTCCEEECCCSCSHH-HHHC
T ss_pred eEEEEEcCCCCCceEee-cCCCcc---ccceECCCCCEEEEccC-C----CeeEEEEEcCCCCcEEEccCCCcCh-hhhh
Confidence 45888898888887665 221111 11112236765553222 1 1248999999988776222111100 0000
Q ss_pred ccee-EE-EEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEe-cC-
Q 048458 276 HRER-SI-GILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRN-DD- 351 (386)
Q Consensus 276 ~~~~-~L-~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~-~~- 351 (386)
.... .. ..-+|++.+..... .++.||.+ + +... ... .....+.+. +|.+++.. ..
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~--------g~~~l~~~---g---~~~~-----~~~-~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARRE--------GRSAVFID---G---ERVE-----APQ-GNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEET--------TEEEEEET---T---EEEC-----CCS-SEEEEEEEE-TTEEEEEEEETT
T ss_pred hccccceeEcCCCcEEEEEEcC--------CcEEEEEE---C---Ceec-----cCC-CceEEEEec-CCEEEEEEcCCC
Confidence 0000 01 12367655555444 48999988 2 1111 111 112345556 67655542 22
Q ss_pred --CeEEEEECCCCeEEEe
Q 048458 352 --GELVLYDHKTQEVVQC 367 (386)
Q Consensus 352 --~~l~~ydl~~~~~~~v 367 (386)
..++.+|+++ +.+.+
T Consensus 304 ~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 304 TPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEEEEETTCC-EEECC
T ss_pred CCCeEEEEcCCC-ceEEE
Confidence 2488888876 44443
No 161
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=55.74 E-value=65 Score=31.86 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=60.8
Q ss_pred CceEEECCeEEEEEE-eecCCCCCceEEEEEEC-CC--ceeeee-cCCCCCCC-CCCccceeEEEE--eCCe----EEEE
Q 048458 224 NSTVHLNGAVHWMAI-RKESDGTNKDIIVSFDF-GD--ETFRYR-KLPDCLYN-TDHIHRERSIGI--LEKS----IALF 291 (386)
Q Consensus 224 ~~~v~~~G~lywl~~-~~~~~~~~~~~il~fD~-~~--~~~~~i-~~P~~~~~-~~~~~~~~~L~~--~~G~----L~lv 291 (386)
..++..+|.+|.... . +.|.++|. .+ +.|+.- ..+..... .........++. .+|+ +++.
T Consensus 56 ~tP~v~~g~vyv~~~~~--------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~ 127 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP--------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT 127 (599)
T ss_dssp SCCEEETTEEEEECSTT--------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE
T ss_pred eccEEECCEEEEEeCCC--------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE
Confidence 457889999998765 4 57999998 54 456653 11111000 000001112333 4555 5443
Q ss_pred EeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCcee--EEEEEecCCeEEEEec------CCeEEEEECCCCe
Q 048458 292 VSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW--QYLGFGANDEVMLRND------DGELVLYDHKTQE 363 (386)
Q Consensus 292 ~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~--~~~~~~~~g~i~l~~~------~~~l~~ydl~~~~ 363 (386)
.. + . .|..|+-...+..|..... ........ .|+.. ++.|++... ++.++.||.+|++
T Consensus 128 t~--d-------g--~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 128 QL--D-------G--NVAALNAETGETVWKVENS-DIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp CT--T-------S--EEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred cC--C-------C--EEEEEECCCCCEEEeecCC-CCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCc
Confidence 22 1 1 2445553222355764311 00000111 34432 456666542 4679999999998
Q ss_pred EEEe
Q 048458 364 VVQC 367 (386)
Q Consensus 364 ~~~v 367 (386)
..+-
T Consensus 194 ~~W~ 197 (599)
T 1w6s_A 194 QVWR 197 (599)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 162
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=55.68 E-value=1.4e+02 Score=28.34 Aligned_cols=137 Identities=10% Similarity=0.019 Sum_probs=68.4
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 272 (386)
...+.+|+..++.... . .+... ...-..+.+ +|.+...+.. + +.|..+|+.+...... +.....
T Consensus 466 d~~i~~~~~~~~~~~~-~-~~~~~--~~~v~~~~~s~~g~~l~~~~~-d------g~i~iw~~~~~~~~~~-~~~~h~-- 531 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSF-D-LKTPL--RAKPSYISISPSETYIAAGDV-M------GKILLYDLQSREVKTS-RWAFRT-- 531 (615)
T ss_dssp TSCEEEEETTEEEEEE-E-CSSCC--SSCEEEEEECTTSSEEEEEET-T------SCEEEEETTTTEEEEC-CSCCCS--
T ss_pred CCeEEEEECCCccccc-c-ccCCc--cCceEEEEECCCCCEEEEcCC-C------CeEEEeeCCCCcceeE-eecCCC--
Confidence 4567888887765432 1 11110 001112333 6665555544 2 6799999987655332 221010
Q ss_pred CCccceeEEEEe-----------CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEec
Q 048458 273 DHIHRERSIGIL-----------EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA 341 (386)
Q Consensus 273 ~~~~~~~~L~~~-----------~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~ 341 (386)
.....+.-. +|++.+..... ..+.||.++... ....++... .....-+++.+
T Consensus 532 ---~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d--------g~i~iw~~~~~~-----~~~~~~~~h-~~~v~~l~~s~ 594 (615)
T 1pgu_A 532 ---SKINAISWKPAEKGANEEEIEEDLVATGSLD--------TNIFIYSVKRPM-----KIIKALNAH-KDGVNNLLWET 594 (615)
T ss_dssp ---SCEEEEEECCCC------CCSCCEEEEEETT--------SCEEEEESSCTT-----CCEEETTSS-TTCEEEEEEEE
T ss_pred ---CceeEEEEcCccccccccccCCCEEEEEcCC--------CcEEEEECCCCc-----eechhhhcC-ccceEEEEEcC
Confidence 122222222 56665555443 589999998521 112222211 12225567778
Q ss_pred CCeEEEEecCCeEEEEECCCC
Q 048458 342 NDEVMLRNDDGELVLYDHKTQ 362 (386)
Q Consensus 342 ~g~i~l~~~~~~l~~ydl~~~ 362 (386)
++.++....++.+..||++++
T Consensus 595 ~~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 595 PSTLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp TTEEEEEETTSCEEEEEEC--
T ss_pred CCCeEEecCCceEEEEeeecC
Confidence 888333345667999998763
No 163
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=54.25 E-value=1.1e+02 Score=26.53 Aligned_cols=106 Identities=4% Similarity=0.016 Sum_probs=55.5
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCe-EEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKS-IALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~-L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
..|..+|..+.+++.+. ... .--.++.. +|+ |++...... ......+.+|.++. ........
T Consensus 169 ~~v~~~d~~~g~~~~~~---~~~------~p~gl~~spdg~~lyv~~~~~~---~~~~~~i~~~~~~~----~~l~~~~~ 232 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA---DLD------HPNGLAFSPDEQTLYVSQTPEQ---GHGSVEITAFAWRD----GALHDRRH 232 (305)
T ss_dssp EEEEEECSSSCCCEEEE---EES------SEEEEEECTTSSEEEEEECCC------CCCEEEEEEEET----TEEEEEEE
T ss_pred CeEEEEcCCCCcEEEEe---cCC------CCcceEEcCCCCEEEEEecCCc---CCCCCEEEEEEecC----CCccCCeE
Confidence 68999999877776654 111 11123333 565 555443210 00113455554442 11222111
Q ss_pred e-ecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEEeeecC
Q 048458 326 V-DLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQCESSN 371 (386)
Q Consensus 326 i-~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~v~~~~ 371 (386)
+ ....... .-++++.+|.+++... ..+..||++.+....+..+.
T Consensus 233 ~~~~~~~~p-dgi~~d~~G~lwv~~~-~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 233 FASVPDGLP-DGFCVDRGGWLWSSSG-TGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp EECCSSSCC-CSEEECTTSCEEECCS-SEEEEECTTSCEEEEEECSS
T ss_pred EEECCCCCC-CeEEECCCCCEEEecC-CcEEEECCCCCEEEEEECCC
Confidence 1 1111111 2366777888887764 45999999988888887643
No 164
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=53.32 E-value=1.2e+02 Score=26.87 Aligned_cols=105 Identities=10% Similarity=0.115 Sum_probs=53.3
Q ss_pred eEEEEEECCCce------eeeecCCCCCCCCCCccceeEEEE-----eCCeEEEEEeeCCCCCCCCCCEEEEEEEee---
Q 048458 248 DIIVSFDFGDET------FRYRKLPDCLYNTDHIHRERSIGI-----LEKSIALFVSCHTEDNTAGLGICSVYVMKE--- 313 (386)
Q Consensus 248 ~~il~fD~~~~~------~~~i~~P~~~~~~~~~~~~~~L~~-----~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~--- 313 (386)
+.|..+|+.+.. +..+........ . .....+.- -+|...++....+ ..+.+|.++.
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~--~~v~~~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~ 160 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMK-K--HSFWALKWGASNDRLLSHRLVATDVK-------GTTYIWKFHPFAD 160 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGG-G--SCEEEEEEECCC----CEEEEEEETT-------SCEEEEEEESSSS
T ss_pred CCEEEEEccCCcccccccceeecccccccC-C--CcEEEEEEeeccCCCCceEEEEEeCC-------CcEEEEeCCcccc
Confidence 678888887665 555533211000 0 11222332 3566623333344 5899999885
Q ss_pred ---cCCCcceEEEEEeec-----CC-CceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeE
Q 048458 314 ---NIEVEHWINLFTVDL-----RA-QFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEV 364 (386)
Q Consensus 314 ---~~~~~~W~~~~~i~~-----~~-~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~ 364 (386)
.. ...|....++.. .. .....-+++.+++ .++. ..++.+..||+++++.
T Consensus 161 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 161 ESNSL-TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp HHHHT-TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE
T ss_pred ccccc-eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce
Confidence 22 233554434421 11 1111456667777 4444 3456799999988764
No 165
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=52.53 E-value=82 Score=27.27 Aligned_cols=19 Identities=5% Similarity=-0.088 Sum_probs=11.9
Q ss_pred eEEEEEECCCceeeeecCC
Q 048458 248 DIIVSFDFGDETFRYRKLP 266 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P 266 (386)
+.|.+||...+.......+
T Consensus 157 ~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 157 NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp SEEEEECTTSCEEEEEECS
T ss_pred CEEEEECCCCCEeEEEecC
Confidence 6899999984433333433
No 166
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=51.86 E-value=1.4e+02 Score=27.23 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=67.9
Q ss_pred cceEEEEEcCCCcee-ecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWR-RIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W~-~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~ 272 (386)
...+.+|+.+++.-. ... .. ......+..+|.....+.. + +.|..+|+.+... ..+..+....
T Consensus 298 d~~i~i~d~~~~~~~~~~~-~~-----~~~v~~~~~~~~~l~~~~~-d------g~i~vwd~~~~~~~~~~~~~~~~~-- 362 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLT-GH-----QSLTSGMELKDNILVSGNA-D------STVKIWDIKTGQCLQTLQGPNKHQ-- 362 (445)
T ss_dssp TSCEEEEETTTCCEEEEEC-CC-----CSCEEEEEEETTEEEEEET-T------SCEEEEETTTCCEEEEECSTTSCS--
T ss_pred CCeEEEEECCCCCEEEEEc-CC-----cccEEEEEEeCCEEEEEeC-C------CeEEEEECCCCcEEEEEccCCCCC--
Confidence 345777887765321 111 00 0111234456665444443 2 6899999976543 4444433221
Q ss_pred CCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecC---C-CceeEEEEEecCCeEEEE
Q 048458 273 DHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLR---A-QFAWQYLGFGANDEVMLR 348 (386)
Q Consensus 273 ~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~---~-~~~~~~~~~~~~g~i~l~ 348 (386)
....-...++.+.+.+. .+ ..+.||.++. .+ .+.++... . .....-+++.+++.++..
T Consensus 363 ----~~v~~~~~~~~~l~s~~-~d-------g~v~iwd~~~----~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 363 ----SAVTCLQFNKNFVITSS-DD-------GTVKLWDLKT----GE--FIRNLVTLESGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp ----SCEEEEEECSSEEEEEE-TT-------SEEEEEETTT----CC--EEEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred ----CCEEEEEECCCEEEEEe-CC-------CeEEEEECCC----Cc--eeeeeeccccCCCCceEEEEEecCCEEEEEE
Confidence 12222334666555544 34 5899998874 22 23333111 1 111245666777765554
Q ss_pred e-cCC----eEEEEECCCC
Q 048458 349 N-DDG----ELVLYDHKTQ 362 (386)
Q Consensus 349 ~-~~~----~l~~ydl~~~ 362 (386)
. .++ .+.+||.+..
T Consensus 425 ~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 425 GSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp ECSSSSSCCEEEEEECCCC
T ss_pred cccCCCCccEEEEEECCCC
Confidence 3 333 4899998764
No 167
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=51.30 E-value=1.2e+02 Score=26.27 Aligned_cols=94 Identities=11% Similarity=0.134 Sum_probs=47.1
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+..... ..+.... .....+.-. +|++.+.+.. + ..+.+|.++. ..-. ..
T Consensus 64 g~i~iw~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~s~~~-d-------g~v~iwd~~~----~~~~--~~ 123 (368)
T 3mmy_A 64 NDVRCWEVQDSGQTIPKAQQMHT------GPVLDVCWSDDGSKVFTASC-D-------KTAKMWDLSS----NQAI--QI 123 (368)
T ss_dssp SEEEEEEECTTSCEEEEEEEECS------SCEEEEEECTTSSEEEEEET-T-------SEEEEEETTT----TEEE--EE
T ss_pred CcEEEEEcCCCCceeEEEecccc------CCEEEEEECcCCCEEEEEcC-C-------CcEEEEEcCC----CCce--ee
Confidence 678999988622211 1111111 122222222 5665554443 3 5899998874 2211 12
Q ss_pred eecCCCceeEEEEE--ecCCeEEE-EecCCeEEEEECCCCe
Q 048458 326 VDLRAQFAWQYLGF--GANDEVML-RNDDGELVLYDHKTQE 363 (386)
Q Consensus 326 i~~~~~~~~~~~~~--~~~g~i~l-~~~~~~l~~ydl~~~~ 363 (386)
..... ....+.+ .+++..++ ...++.+..||+++++
T Consensus 124 ~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 124 AQHDA--PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EECSS--CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ccccC--ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 22222 1134444 55665444 4456678888887766
No 168
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=50.77 E-value=1.2e+02 Score=25.94 Aligned_cols=35 Identities=6% Similarity=0.296 Sum_probs=24.4
Q ss_pred EEEEEecCCeEEEEe-cCCeEEEEECCCCe-EEEeee
Q 048458 335 QYLGFGANDEVMLRN-DDGELVLYDHKTQE-VVQCES 369 (386)
Q Consensus 335 ~~~~~~~~g~i~l~~-~~~~l~~ydl~~~~-~~~v~~ 369 (386)
.-++++++|.+++.. .++.+..||+++++ ...+..
T Consensus 229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred CceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 446677788888875 35679999999554 344444
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=50.46 E-value=1.3e+02 Score=26.36 Aligned_cols=205 Identities=7% Similarity=0.066 Sum_probs=0.0
Q ss_pred EEeeecccEEEeecCCC-------------------------CccccEEEEccccccceecCCCCCCchhhhhhcccccc
Q 048458 92 IVSSCSGLVCLLLNTFH-------------------------SCHFPMFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATA 146 (386)
Q Consensus 92 ~~~s~~GLl~~~~~~~~-------------------------~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~ 146 (386)
+.-+.+|-+++. +... + ++++++.|++....-......
T Consensus 29 va~d~~G~l~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~~d~~~g~~~~~~~~~~~~------------ 91 (329)
T 3fvz_A 29 VALDSKNNLVIF-HRGDHVWDGNSFDSKFVYQQRGLGPIEEDT----ILVIDPNNAEILQSSGKNLFY------------ 91 (329)
T ss_dssp EEECTTCCEEEE-ECTTCCCCTTSBCTTSCBSCGGGCSCCSCC----EEEECTTTCCEEEEECTTTCS------------
T ss_pred EEECCCCCEEEE-eCCCCeEEeeccCcceeecccccccccCCc----EEEEECCCCeEEeccCCCccC------------
Q ss_pred ccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeeccccccccccceEEEEEcCCC--ceeecCCCCCC----ccc
Q 048458 147 SFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQFRREFSDIQVYSLKNN--CWRRIQPNVPC----IPC 220 (386)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~--~W~~~~~~~p~----~~~ 220 (386)
... ++.+|+..+ +.+.. .....+.+|+..+. .=..+. .... ...
T Consensus 92 --------------~p~-gia~d~~g~----l~v~d----------~~~~~v~~~~~~g~~~~~~~~~-~~~~~g~~~~~ 141 (329)
T 3fvz_A 92 --------------LPH-GLSIDTDGN----YWVTD----------VALHQVFKLDPHSKEGPLLILG-RSMQPGSDQNH 141 (329)
T ss_dssp --------------SEE-EEEECTTSC----EEEEE----------TTTTEEEEECTTCSSCCSEEES-BTTBCCCSTTC
T ss_pred --------------Cce-EEEECCCCC----EEEEE----------CCCCEEEEEeCCCCeEEEEEec-ccCCCCCCccc
Q ss_pred cCCCceEEE---CCeEEEEEE-eecCCCCCceEEEEEECCCceeeeecC--------CCCCCCCCCccceeEEEEeCCeE
Q 048458 221 LSSNSTVHL---NGAVHWMAI-RKESDGTNKDIIVSFDFGDETFRYRKL--------PDCLYNTDHIHRERSIGILEKSI 288 (386)
Q Consensus 221 ~~~~~~v~~---~G~lywl~~-~~~~~~~~~~~il~fD~~~~~~~~i~~--------P~~~~~~~~~~~~~~L~~~~G~L 288 (386)
...-.++.+ +|.+|+... . . ..|..||...+....+.. |..... .....+...+|.|
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~-~------~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~----p~gia~d~~~g~l 210 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYC-N------SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSV----PHSLALVPHLDQL 210 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSS-C------CEEEEECTTSCEEEEECEECCSSSCCTTEESC----EEEEEEETTTTEE
T ss_pred cCCCcEEEEeCCCCeEEEEeCCC-C------CeEEEEcCCCCEEEEeccCCCCCCCCCcccCC----CcEEEEECCCCEE
Q ss_pred EEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEec------CCeEEEEecCCe-EEEEECCC
Q 048458 289 ALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA------NDEVMLRNDDGE-LVLYDHKT 361 (386)
Q Consensus 289 ~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~------~g~i~l~~~~~~-l~~ydl~~ 361 (386)
++...... .+.+|..+. .+.............. ..+++.+ +|.+++...... +..+|+++
T Consensus 211 ~v~d~~~~--------~I~~~~~~~----G~~~~~~~~~~~~~~~-~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 211 CVADRENG--------RIQCFKTDT----KEFVREIKHASFGRNV-FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EEEETTTT--------EEEEEETTT----CCEEEEECCTTTTTCE-EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred EEEECCCC--------EEEEEECCC----CcEEEEEeccccCCCc-ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC
Q ss_pred CeEEEe
Q 048458 362 QEVVQC 367 (386)
Q Consensus 362 ~~~~~v 367 (386)
+++...
T Consensus 278 g~~~~~ 283 (329)
T 3fvz_A 278 GEIIDV 283 (329)
T ss_dssp CCEEEE
T ss_pred CeEEEE
No 170
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=50.42 E-value=1.2e+02 Score=25.89 Aligned_cols=112 Identities=14% Similarity=0.133 Sum_probs=0.0
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECC--Cceeeee-cCCCCCCCCCCccceeEEEEeC---CeEEEEEeeCCCCCCCCC
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFG--DETFRYR-KLPDCLYNTDHIHRERSIGILE---KSIALFVSCHTEDNTAGL 303 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~--~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~---G~L~lv~~~~~~~~~~~~ 303 (386)
+|.+...+.. + +.|..+|+. +..+..+ .+.... ..-..+.-.. |.+.+.+....
T Consensus 22 ~~~~l~~~~~-d------g~i~iw~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~d~~~l~s~~~dg------- 81 (351)
T 3f3f_A 22 YGRHVATCSS-D------QHIKVFKLDKDTSNWELSDSWRAHD------SSIVAIDWASPEYGRIIASASYDK------- 81 (351)
T ss_dssp SSSEEEEEET-T------SEEEEEEECSSSCCEEEEEEEECCS------SCEEEEEECCGGGCSEEEEEETTS-------
T ss_pred CCCEEEEeeC-C------CeEEEEECCCCCCcceecceeccCC------CcEEEEEEcCCCCCCEEEEEcCCC-------
Q ss_pred CEEEEEEEeecC---CCcceEEEEEeecCCCceeEEEEEecC--C-eEEEEecCCeEEEEECCCCe
Q 048458 304 GICSVYVMKENI---EVEHWINLFTVDLRAQFAWQYLGFGAN--D-EVMLRNDDGELVLYDHKTQE 363 (386)
Q Consensus 304 ~~i~iW~l~~~~---~~~~W~~~~~i~~~~~~~~~~~~~~~~--g-~i~l~~~~~~l~~ydl~~~~ 363 (386)
.+.||.++... ....|.....+......- .-+++.++ + .++....++.+..||+++++
T Consensus 82 -~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 82 -TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSL-YSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp -CEEEEEECTTSCTTSSCSEEEEEEECCCSSCE-EEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred -eEEEEecCCCcccccccCcceeeeecccCCce-eEEEEcCCCCCcEEEEecCCCcEEEecCCChH
No 171
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=50.28 E-value=1.4e+02 Score=26.54 Aligned_cols=135 Identities=11% Similarity=0.070 Sum_probs=70.9
Q ss_pred cceEEEEEcCCCceeecCCCC-CCccccCCCceEEE---CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNV-PCIPCLSSNSTVHL---NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLY 270 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~-p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~ 270 (386)
...+.+|+..++.....- .. .... .-..+.+ +|.....+.. + +.|..+|+.++....+.......
T Consensus 95 dg~i~iwd~~~~~~~~~~-~~~~h~~---~v~~~~~~~~~~~~l~s~~~-d------~~i~iwd~~~~~~~~~~~~~~~~ 163 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFI-QGMGPGD---AITGMKFNQFNTNQLFVSSI-R------GATTLRDFSGSVIQVFAKTDSWD 163 (383)
T ss_dssp TSCEEEEETTSTTCEEEE-CCCSTTC---BEEEEEEETTEEEEEEEEET-T------TEEEEEETTSCEEEEEECCCCSS
T ss_pred CCeEEEEeCCCcccceee-ecCCcCC---ceeEEEeCCCCCCEEEEEeC-C------CEEEEEECCCCceEEEeccCCCC
Confidence 456889998877654433 11 0110 0012322 3344433333 2 78999999988777765443221
Q ss_pred CCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEE
Q 048458 271 NTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLR 348 (386)
Q Consensus 271 ~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~ 348 (386)
.....+.-. +|+..+.+. .+ ..+.+|.++. + ...++.... ....-+++.+++. +++.
T Consensus 164 -----~~v~~~~~~~~~~~l~~~~-~d-------~~i~i~d~~~----~---~~~~~~~h~-~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 164 -----YWYCCVDVSVSRQMLATGD-ST-------GRLLLLGLDG----H---EIFKEKLHK-AKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp -----CCEEEEEEETTTTEEEEEE-TT-------SEEEEEETTS----C---EEEEEECSS-SCEEEEEECSSCTTEEEE
T ss_pred -----CCeEEEEECCCCCEEEEEC-CC-------CCEEEEECCC----C---EEEEeccCC-CcEEEEEECCCCCCEEEE
Confidence 112222222 566555444 34 5899998742 1 222232111 1125566667665 4444
Q ss_pred -ecCCeEEEEECCC
Q 048458 349 -NDDGELVLYDHKT 361 (386)
Q Consensus 349 -~~~~~l~~ydl~~ 361 (386)
..++.+..||+++
T Consensus 223 ~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 223 SSVDATVKLWDLRN 236 (383)
T ss_dssp EETTSEEEEEEGGG
T ss_pred EeCCCEEEEEeCCC
Confidence 4566789999886
No 172
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=49.77 E-value=1.3e+02 Score=26.10 Aligned_cols=101 Identities=9% Similarity=0.101 Sum_probs=52.4
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
..|..+|+.+.+... ++.+... .....+ .-+|+..++... . ..+.+|-++. .....++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~-s~dg~~l~~~~~-~-------~~i~~~d~~~------~~~~~~~ 222 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKM------STGLAL-DSEGKRLYTTNA-D-------GELITIDTAD------NKILSRK 222 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTT------CCCCEE-ETTTTEEEEECT-T-------SEEEEEETTT------TEEEEEE
T ss_pred ceEEEEcCCCCceEEEecCCCCc------cceEEE-CCCCCEEEEEcC-C-------CeEEEEECCC------CeEEEEE
Confidence 679999998776543 3322211 111222 224544333332 3 4666665442 2333344
Q ss_pred ecCC---CceeEEEEEecCCe-EEEEec-CCeEEEEECCCCeEE-Eeee
Q 048458 327 DLRA---QFAWQYLGFGANDE-VMLRND-DGELVLYDHKTQEVV-QCES 369 (386)
Q Consensus 327 ~~~~---~~~~~~~~~~~~g~-i~l~~~-~~~l~~ydl~~~~~~-~v~~ 369 (386)
.... .....-++++++|. +++... .+.+..||+++++.. .+..
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 4322 11114467788775 555554 367999999988753 3444
No 173
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=49.05 E-value=1.5e+02 Score=26.58 Aligned_cols=101 Identities=10% Similarity=0.097 Sum_probs=53.7
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.... .+.......... ......++- .+|++.+++... ..+.||-+.. . .....
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d--------g~i~vwd~~~----~--~~~~~ 335 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNREPDRNDNE-LPIVTSVAFSISGRLLFAGYSN--------GDCYVWDTLL----A--EMVLN 335 (380)
T ss_dssp SCEEEEETTTTEEEEEECCCCSSSCCS-SCSCSEEEECSSSSEEEEECTT--------SCEEEEETTT----C--CEEEE
T ss_pred CeEEEEECCCCcEEEEecccccccccc-cCceEEEEECCCCCEEEEEECC--------CCEEEEECCC----C--ceEEE
Confidence 67999999876543 333222211100 011122222 267776665544 5899997653 1 12222
Q ss_pred eecC--CCc-eeEEEEEecCCeEEEEe-cCCeEEEEECCCCe
Q 048458 326 VDLR--AQF-AWQYLGFGANDEVMLRN-DDGELVLYDHKTQE 363 (386)
Q Consensus 326 i~~~--~~~-~~~~~~~~~~g~i~l~~-~~~~l~~ydl~~~~ 363 (386)
+... .+. ...-+++.++|..++.. .++.+..||+++++
T Consensus 336 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 336 LGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 2211 111 12567788888766654 46679999988753
No 174
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=48.73 E-value=1.3e+02 Score=26.01 Aligned_cols=106 Identities=11% Similarity=0.014 Sum_probs=58.7
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSV 308 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~i 308 (386)
+|.+||.... . +.|..+|..++.-..+..+.. -..++.. +|+|+++..... ...|
T Consensus 42 ~g~lyv~d~~-~------~~I~~~d~~g~~~~~~~~~~~---------p~gia~~~dG~l~vad~~~~--------~~~v 97 (306)
T 2p4o_A 42 DGTIFVTNHE-V------GEIVSITPDGNQQIHATVEGK---------VSGLAFTSNGDLVATGWNAD--------SIPV 97 (306)
T ss_dssp TSCEEEEETT-T------TEEEEECTTCCEEEEEECSSE---------EEEEEECTTSCEEEEEECTT--------SCEE
T ss_pred CCCEEEEeCC-C------CeEEEECCCCceEEEEeCCCC---------ceeEEEcCCCcEEEEeccCC--------cceE
Confidence 6888887644 2 689999998765555554421 1233333 688766654332 3456
Q ss_pred EEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEe-cCCeEEEEECCCCe
Q 048458 309 YVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRN-DDGELVLYDHKTQE 363 (386)
Q Consensus 309 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~-~~~~l~~ydl~~~~ 363 (386)
++++.. +.+...+..++. .... .-.+.+.++.+++.. ..+.++.+|+.+++
T Consensus 98 ~~~d~~--~g~~~~~~~~~~-~~~~-~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 98 VSLVKS--DGTVETLLTLPD-AIFL-NGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEECT--TSCEEEEEECTT-CSCE-EEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEcCC--CCeEEEEEeCCC-cccc-CcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 666532 234444433321 1111 223345555666654 35679999998764
No 175
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=47.46 E-value=2.3e+02 Score=28.25 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=22.1
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCCc--eeee
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRY 262 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~ 262 (386)
...++.+|.+|.-..+ +.|.++|..+. .|+.
T Consensus 122 ~~~a~~~~~v~v~~~d--------g~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 122 RGVALWKGKVYVGAWD--------GRLIALDAATGKEVWHQ 154 (677)
T ss_dssp CCCEEETTEEEEECTT--------SEEEEEETTTCCEEEEE
T ss_pred CCceEECCEEEEEcCC--------CEEEEEECCCCCEEeee
Confidence 3456788899876544 68999998654 4654
No 176
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=47.03 E-value=1.5e+02 Score=26.09 Aligned_cols=101 Identities=7% Similarity=0.011 Sum_probs=50.6
Q ss_pred eEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecC---------C
Q 048458 248 DIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENI---------E 316 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~---------~ 316 (386)
+.|..+|..+..+... .+.... ..-..+.-. +|++.+.+. .+ .++.||.+...+ .
T Consensus 172 ~~i~~w~~~~~~~~~~~~~~~h~------~~v~~l~~sp~g~~l~s~s-~D-------~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 172 DTVKLYREEEDDWVCCATLEGHE------STVWSLAFDPSGQRLASCS-DD-------RTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECCCS------SCEEEEEECTTSSEEEEEE-TT-------SCEEEEEEECTTCTTCCCCC--
T ss_pred CcEEEEEecCCCEEEEEEecCCC------CceEEEEECCCCCEEEEEe-CC-------CeEEEeccccCCCCccceeecc
Confidence 5788888887765433 222211 122233322 566554444 44 589999864221 1
Q ss_pred CcceEEEEEeecCCCceeEEEEEecCCe-EEEEecCCeEEEEECCCC
Q 048458 317 VEHWINLFTVDLRAQFAWQYLGFGANDE-VMLRNDDGELVLYDHKTQ 362 (386)
Q Consensus 317 ~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~~~~~~l~~ydl~~~ 362 (386)
...|..+.++.........-++..+++. ++....++.+.+||.+++
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 2356666555432212224455555554 333444555777766543
No 177
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=46.76 E-value=1.7e+02 Score=26.68 Aligned_cols=199 Identities=8% Similarity=0.059 Sum_probs=0.0
Q ss_pred ccEEEeecCCCCccccEEEEcccc---ccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCC
Q 048458 98 GLVCLLLNTFHSCHFPMFVWNPST---RKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSD 174 (386)
Q Consensus 98 GLl~~~~~~~~~~~~~~~V~NP~T---~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ 174 (386)
++|+.. ...+. +.||+..+ .....-+...... +...+..+.+.|..+.
T Consensus 195 ~~l~s~-~~dg~----i~vwd~~~~~~~~~~~~~~~~~~~------------------------h~~~v~~v~~~p~~~~ 245 (430)
T 2xyi_A 195 GYLLSA-SDDHT----ICLWDINATPKEHRVIDAKNIFTG------------------------HTAVVEDVAWHLLHES 245 (430)
T ss_dssp TEEEEE-CTTSC----EEEEETTSCCBGGGEEECSEEECC------------------------CSSCEEEEEECSSCTT
T ss_pred CeEEEE-eCCCe----EEEEeCCCCCCCCceeccceeecC------------------------CCCCEeeeEEeCCCCC
Q ss_pred eEEEEEEEeeeccccccccccceEEEEEcCCCc-eeecCCCCCCccccCCCceEEECCe-EEEEEEeecCCCCCceEEEE
Q 048458 175 FKILLIVHAREVASEQFRREFSDIQVYSLKNNC-WRRIQPNVPCIPCLSSNSTVHLNGA-VHWMAIRKESDGTNKDIIVS 252 (386)
Q Consensus 175 ykvv~~~~~~~~~~~~~~~~~~~~~vyss~~~~-W~~~~~~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~il~ 252 (386)
+-+.+ .....+.+|+.+++. .+.+. .+.........-...-+|. ++..+.. + +.|..
T Consensus 246 ~l~s~-------------~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~v~~i~~~p~~~~~l~tg~~-d------g~v~v 304 (430)
T 2xyi_A 246 LFGSV-------------ADDQKLMIWDTRNNNTSKPSH-TVDAHTAEVNCLSFNPYSEFILATGSA-D------KTVAL 304 (430)
T ss_dssp EEEEE-------------ETTSEEEEEETTCSCSSSCSE-EEECCSSCEEEEEECSSCTTEEEEEET-T------SEEEE
T ss_pred EEEEE-------------eCCCeEEEEECCCCCCCccee-EeecCCCCeEEEEeCCCCCCEEEEEeC-C------CeEEE
Q ss_pred EECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcc--------eEEE
Q 048458 253 FDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEH--------WINL 323 (386)
Q Consensus 253 fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~--------W~~~ 323 (386)
+|+.+..-....+.... .....+.-. +|+-.++....+ ..+.||-+...+.... -..+
T Consensus 305 wd~~~~~~~~~~~~~h~------~~v~~i~~sp~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 371 (430)
T 2xyi_A 305 WDLRNLKLKLHSFESHK------DEIFQVQWSPHNETILASSGTD-------RRLHVWDLSKIGEEQSTEDAEDGPPELL 371 (430)
T ss_dssp EETTCTTSCSEEEECCS------SCEEEEEECSSCTTEEEEEETT-------SCCEEEEGGGTTCCCCHHHHHHCCTTEE
T ss_pred EeCCCCCCCeEEeecCC------CCEEEEEECCCCCCEEEEEeCC-------CcEEEEeCCCCccccCccccccCCcceE
Q ss_pred EEeecCCCceeEEEEEecCCe--EEEEecCCeEEEEECC
Q 048458 324 FTVDLRAQFAWQYLGFGANDE--VMLRNDDGELVLYDHK 360 (386)
Q Consensus 324 ~~i~~~~~~~~~~~~~~~~g~--i~l~~~~~~l~~ydl~ 360 (386)
.........- .-+++.+++. ++-...++.+.+|++.
T Consensus 372 ~~~~~h~~~v-~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 372 FIHGGHTAKI-SDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EECCCCSSCE-EEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEcCCCCCCc-eEEEECCCCCCEEEEEECCCCEEEeEcc
No 178
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=46.17 E-value=1.7e+02 Score=26.53 Aligned_cols=53 Identities=17% Similarity=0.171 Sum_probs=31.1
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-EecCCeEEEEECCCCe
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RNDDGELVLYDHKTQE 363 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~ 363 (386)
..+.+|-+.. . ....++.... ....-+++.++|..++ ...++.+.+||+++++
T Consensus 318 ~~i~iwd~~~----~--~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 318 KTIKMWDVST----G--MCLMTLVGHD-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp SEEEEEETTT----T--EEEEEEECCS-SCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CeEEEEECCC----C--ceEEEEECCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 5899998763 1 2233332111 1114566777776444 4456679999998776
No 179
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=45.51 E-value=10 Score=23.36 Aligned_cols=19 Identities=32% Similarity=0.240 Sum_probs=15.1
Q ss_pred CCCCcHHHHHHHHccCCcc
Q 048458 2 SKSLPAKFMLETLLKLPVK 20 (386)
Q Consensus 2 ~~~LP~dll~~IL~rLP~~ 20 (386)
++.||.|+-+|||+--...
T Consensus 21 F~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp TTTSCHHHHHHHTTCCCSC
T ss_pred HHHCcHHHHHHHHhcchHH
Confidence 4689999999999865544
No 180
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=45.24 E-value=1.5e+02 Score=25.47 Aligned_cols=94 Identities=11% Similarity=0.175 Sum_probs=55.1
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+........... .....+.-. +|++.+.+... ..+.||-+.. +..+..+
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~-------~~v~~~~~s~~~~~l~s~s~D--------g~i~iwd~~~------~~~~~~~ 253 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHT-------GYLNTVTVSPDGSLCASGGKD--------GQAMLWDLNE------GKHLYTL 253 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS-------SCEEEEEECTTSSEEEEEETT--------CEEEEEETTT------TEEEEEE
T ss_pred CEEEEEECCCCceeeEecCCC-------CcEEEEEECCCCCEEEEEeCC--------CeEEEEEecc------Cceeeee
Confidence 578889998876543321111 122223322 57766555543 5899997763 3344444
Q ss_pred ecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeE
Q 048458 327 DLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEV 364 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~ 364 (386)
..... ...+++.+++.++....++.+..||++++..
T Consensus 254 ~~~~~--v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 254 DGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp ECSSC--EEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred cCCce--EEeeecCCCCceeeccCCCEEEEEECCCCeE
Confidence 43322 2455666677677666677899999988764
No 181
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=45.20 E-value=1.8e+02 Score=26.37 Aligned_cols=99 Identities=10% Similarity=0.098 Sum_probs=52.9
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+... ..+..|... .....+.-. +|++.+.+... ..+.+|-+.. . ..+.+
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~------~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~----~--~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRH------GAVSSICIDEECCVLILGTTR--------GIIDIWDIRF----N--VLIRS 251 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGG------CCEEEEEECTTSCEEEEEETT--------SCEEEEETTT----T--EEEEE
T ss_pred CeEEEEeCCCCeeeEEEccCCCC------CceEEEEECCCCCEEEEEcCC--------CeEEEEEcCC----c--cEEEE
Confidence 7899999987554 334443221 122222222 56665555544 4899998873 1 22333
Q ss_pred eecCCCceeEEEEEe----cCCeEEEEe-cCCeEEEEECCCCeEEE
Q 048458 326 VDLRAQFAWQYLGFG----ANDEVMLRN-DDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 326 i~~~~~~~~~~~~~~----~~g~i~l~~-~~~~l~~ydl~~~~~~~ 366 (386)
+.........-+++. +++.+++.. .++.+..||+++++...
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQY 297 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEE
T ss_pred EecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEE
Confidence 332222221233222 345555544 45569999999888544
No 182
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=43.72 E-value=2.6e+02 Score=27.89 Aligned_cols=144 Identities=14% Similarity=0.089 Sum_probs=78.4
Q ss_pred cceEEEEEcCCC--c-eeecCCCCCCccccCCCceEEEC-CeEEEEEEeecCCCCCceEEEEEECCC--ceeeeecCCCC
Q 048458 195 FSDIQVYSLKNN--C-WRRIQPNVPCIPCLSSNSTVHLN-GAVHWMAIRKESDGTNKDIIVSFDFGD--ETFRYRKLPDC 268 (386)
Q Consensus 195 ~~~~~vyss~~~--~-W~~~~~~~p~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~~~~il~fD~~~--~~~~~i~~P~~ 268 (386)
...+.+++..++ . |+.+.... . ....++.-+ +.+|+.+.. + .....|...|+.+ +.|+.+- |..
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~--~---~~~~~~~~dg~~l~~~s~~-~---~~~~~l~~~d~~~~~~~~~~l~-~~~ 362 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDL--K---AQWDFVDGVGDQLWFVSGD-G---APLKKIVRVDLSGSTPRFDTVV-PES 362 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSS--S---SCEEEEEEETTEEEEEECT-T---CTTCEEEEEECSSSSCEEEEEE-CCC
T ss_pred cceEEEEECCCCCCcccEEecCCC--C---ceEEEEeccCCEEEEEECC-C---CCCCEEEEEeCCCCccccEEEe-cCC
Confidence 446777777766 5 77665111 1 111223334 456666543 2 1136899999987 5676653 322
Q ss_pred CCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEE
Q 048458 269 LYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVML 347 (386)
Q Consensus 269 ~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l 347 (386)
. .....+...++.|.+..... ....||+++-.+ + ....+..........++..+++ .+++
T Consensus 363 ~------~~l~~~~~~~~~lv~~~~~d--------g~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 363 K------DNLESVGIAGNRLFASYIHD--------AKSQVLAFDLDG--K---PAGAVSLPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp S------SEEEEEEEEBTEEEEEEEET--------TEEEEEEEETTS--C---EEEECBCSSSCEEEEEECCBTCSCEEE
T ss_pred C------CeEEEEEEECCEEEEEEEEC--------CEEEEEEEeCCC--C---ceeeccCCCCeEEEEeecCCCCCEEEE
Confidence 1 11122344478877766655 377888887322 1 2334443222211334444555 4555
Q ss_pred Eec----CCeEEEEECCCCeEEEe
Q 048458 348 RND----DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 348 ~~~----~~~l~~ydl~~~~~~~v 367 (386)
... ...++.||+++++.+.+
T Consensus 424 ~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 424 SFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEcCCCCCCEEEEEECCCCcEEEE
Confidence 432 23599999999987766
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=43.50 E-value=2.4e+02 Score=27.42 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=61.1
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCcee-eeecCCCCCCCCC--C-ccceeEEEEe-CCeEEEEEeeCCCCCCCCCC
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETF-RYRKLPDCLYNTD--H-IHRERSIGIL-EKSIALFVSCHTEDNTAGLG 304 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~--~-~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~ 304 (386)
||+.-+.+.. . ...+.++|..+.+- ..++......+.. + ......+... ++...++..... .
T Consensus 254 DGk~l~v~n~-~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~-------g 320 (567)
T 1qks_A 254 EDKYAIAGAY-W-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET-------G 320 (567)
T ss_dssp TTTEEEEEEE-E-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT-------T
T ss_pred CCCEEEEEEc-c-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC-------C
Confidence 6765555544 2 26889999876543 3345432110000 0 0011222322 345555544332 3
Q ss_pred EEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-e-cCCeEEEEECCCCeEEE-eee
Q 048458 305 ICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR-N-DDGELVLYDHKTQEVVQ-CES 369 (386)
Q Consensus 305 ~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~-~-~~~~l~~ydl~~~~~~~-v~~ 369 (386)
.||+++ +. .....++.+|+..... ...+++++|+.++. . .+.++.++|++++++.. +..
T Consensus 321 --~v~~vd-~~-~~~~~~v~~i~~~~~~--~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 321 --KILLVD-YT-DLNNLKTTEISAERFL--HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp --EEEEEE-TT-CSSEEEEEEEECCSSE--EEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred --eEEEEe-cC-CCccceeeeeeccccc--cCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 355555 21 1234455555543322 56678888865443 3 35679999999998643 444
No 184
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=43.10 E-value=2e+02 Score=26.37 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=44.3
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecC--------C--eE
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDD--------G--EL 354 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~--------~--~l 354 (386)
+|+..++....+ ..+.||.+.+. ....+..+.++.... ...-+++.++ .+++.... . .+
T Consensus 318 ~~~~l~~~~~~d-------~~i~iw~~~~~-~~~~l~~~~~~~~~~--~v~~~~~~~~-~~~v~~~~~~~~~~~~~~i~v 386 (450)
T 2vdu_B 318 NLPFVAFFVEAT-------KCIIILEMSEK-QKGDLALKQIITFPY--NVISLSAHND-EFQVTLDNKESSGVQKNFAKF 386 (450)
T ss_dssp SSSEEEEEETTC-------SEEEEEEECSS-STTCEEEEEEEECSS--CEEEEEEETT-EEEEEECCTTCCSSCCCSEEE
T ss_pred CCCEEEEEECCC-------CeEEEEEeccC-CCCceeeccEeccCC--ceEEEEecCC-cEEEEEecccCCCCCCcceEE
Confidence 466666665344 69999999221 124567777776542 2245666664 45554322 1 68
Q ss_pred EEEECCCCeEEEe
Q 048458 355 VLYDHKTQEVVQC 367 (386)
Q Consensus 355 ~~ydl~~~~~~~v 367 (386)
+.++.++++++..
T Consensus 387 ~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 387 IEYNLNENSFVVN 399 (450)
T ss_dssp EEEETTTTEEEEC
T ss_pred EEEEcCCCeEEEc
Confidence 8889999998754
No 185
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=42.02 E-value=2e+02 Score=26.20 Aligned_cols=148 Identities=13% Similarity=0.166 Sum_probs=76.6
Q ss_pred cceEEEEEc--CCCceeecCCCC--CCccccCCCceEEE-----CCeEEEEEEeecCCCCCceEEEEEEC--------CC
Q 048458 195 FSDIQVYSL--KNNCWRRIQPNV--PCIPCLSSNSTVHL-----NGAVHWMAIRKESDGTNKDIIVSFDF--------GD 257 (386)
Q Consensus 195 ~~~~~vyss--~~~~W~~~~~~~--p~~~~~~~~~~v~~-----~G~lywl~~~~~~~~~~~~~il~fD~--------~~ 257 (386)
.-++.+|+. .++.++.+. .. |.......-.++++ .|.+|.+... .. +.+.-|++ ..
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~-~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-k~-----G~~~q~~l~~~~~g~~~~ 170 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMT-DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-KE-----GEFEQYELKADKNGYISG 170 (355)
T ss_dssp CCEEEEEEECTTTCCEEECS-CTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-SS-----SEEEEEEEEECTTSCEEE
T ss_pred CCeEEEEEECCCCCceeecc-ccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-CC-----CeEEEEEEEeCCCCcccc
Confidence 456888855 677888886 33 42111122234444 3677777766 32 34444444 22
Q ss_pred ceeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeec-CCCcceEEEEEeecCCCc-e
Q 048458 258 ETFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKEN-IEVEHWINLFTVDLRAQF-A 333 (386)
Q Consensus 258 ~~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~-~~~~~W~~~~~i~~~~~~-~ 333 (386)
+.-+.+++|... + ..+.. .|+|++..-. ..||+++-. .....-..+..+...... +
T Consensus 171 ~lVR~f~lgsq~--------E-gcvvDd~~g~Lyv~eEd-----------~GIw~~da~p~~~~~~~~v~~~~~g~l~aD 230 (355)
T 3amr_A 171 KKVRAFKMNSQT--------E-GMAADDEYGRLYIAEED-----------EAIWKFSAEPDGGSNGTVIDRADGRHLTRD 230 (355)
T ss_dssp EEEEEEECSSCE--------E-EEEEETTTTEEEEEETT-----------TEEEEEECSTTSCSCCEEEEEBSSSSBCSC
T ss_pred eEEEEecCCCCc--------c-eEEEcCCCCeEEEeccc-----------ceEEEEeCCcCCCCCceEEEEecCCccccC
Confidence 344556776432 2 22333 4777776543 238999832 111234566555433211 2
Q ss_pred eEEEEE--ecCCe--EEEEe-cCCeEEEEECC-CCe-EEEeee
Q 048458 334 WQYLGF--GANDE--VMLRN-DDGELVLYDHK-TQE-VVQCES 369 (386)
Q Consensus 334 ~~~~~~--~~~g~--i~l~~-~~~~l~~ydl~-~~~-~~~v~~ 369 (386)
-.-+++ ..+++ ++..+ .+..+.+||.+ +++ +..+.+
T Consensus 231 vEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 231 IEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred cceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 234444 33433 55544 34579999997 444 344544
No 186
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=41.93 E-value=1.6e+02 Score=25.08 Aligned_cols=61 Identities=8% Similarity=0.205 Sum_probs=34.7
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCC-ceeEEEEEecCCeEEE-EecCCeEEEEECC-CCeEEEe
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQ-FAWQYLGFGANDEVML-RNDDGELVLYDHK-TQEVVQC 367 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~-~~~~~~v 367 (386)
.++.||.++.. ...|.... +..... ....-+++.++|.++. ...++.+..|+.+ .++|+.+
T Consensus 229 ~~v~iWd~~~~--~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 229 RTCIIWTQDNE--QGPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp SCEEEEEESST--TSCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC
T ss_pred CcEEEEEeCCC--CCccceee-eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEec
Confidence 68999998752 23465421 111111 1114566777776554 4456678888876 4567654
No 187
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=41.88 E-value=2.5e+02 Score=27.20 Aligned_cols=148 Identities=9% Similarity=-0.029 Sum_probs=73.5
Q ss_pred ceEEEEEcC-CC---ceeecCCCCCCccccCCCceEE-ECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCC
Q 048458 196 SDIQVYSLK-NN---CWRRIQPNVPCIPCLSSNSTVH-LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCL 269 (386)
Q Consensus 196 ~~~~vyss~-~~---~W~~~~~~~p~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~ 269 (386)
..+.+++.. ++ ..+.+..... .....+.+ -||.+|+.+.. + ....|..+|+.+..+..+ +.....
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~----~~~~~~~~spdg~l~~~~~~-~----~~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPE----EAIAQAEWAPDGSLIVATDR-T----GWWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETT----BCEEEEEECTTSCEEEEECT-T----SSCEEEEECTTTCCEEESSCCSSBS
T ss_pred cEEEEEEECCCCcccccEEeCCCCC----ceEcceEECCCCeEEEEECC-C----CCeEEEEEECCCCceeecccccccc
Confidence 578888888 56 3333320000 01111222 27887776644 2 124899999977776554 222111
Q ss_pred CCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEE-EEecCCeEEE
Q 048458 270 YNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYL-GFGANDEVML 347 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~-~~~~~g~i~l 347 (386)
....-......+... +|++.+.... . ...||.++-.+ +.. .++.... ..+..+ ..+ ++.+++
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~-~--------~~~l~~~d~~~--~~~---~~l~~~~-~~~~~~~s~~-~~~~~~ 351 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK-G--------AAVLGILDPES--GEL---VDAAGPW-TEWAATLTVS-GTRAVG 351 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS-S--------SCEEEEEETTT--TEE---EECCSSC-CEEEEEEEEE-TTEEEE
T ss_pred cCccccccCceEeEeCCCEEEEEEEc-C--------ccEEEEEECCC--CcE---EEecCCC-CeEEEEEecC-CCEEEE
Confidence 100000001123333 6777666654 4 67899988422 222 2333221 112333 332 234554
Q ss_pred Ee-cCC---eEEEEECCCCeEEEee
Q 048458 348 RN-DDG---ELVLYDHKTQEVVQCE 368 (386)
Q Consensus 348 ~~-~~~---~l~~ydl~~~~~~~v~ 368 (386)
.. ... .++.+|+++++.+.+.
T Consensus 352 ~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 352 VAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEcCCCCCCEEEEEECCCCceEEee
Confidence 43 222 5889999999887774
No 188
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=41.71 E-value=2e+02 Score=26.10 Aligned_cols=106 Identities=11% Similarity=0.049 Sum_probs=57.5
Q ss_pred ceEEEEEECCCc--eeeeecCCCC-CCCCCCccceeEEEEe-CC--eEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcce
Q 048458 247 KDIIVSFDFGDE--TFRYRKLPDC-LYNTDHIHRERSIGIL-EK--SIALFVSCHTEDNTAGLGICSVYVMKENIEVEHW 320 (386)
Q Consensus 247 ~~~il~fD~~~~--~~~~i~~P~~-~~~~~~~~~~~~L~~~-~G--~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W 320 (386)
++.|..+|+.++ +.+.+.+... .....-..-.+.+... +| +|+++.+... ..+++||.++..+ ...
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~------~s~ielf~~d~~~--~~~ 153 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGS------SSTVEVFKFQEEE--KSL 153 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTT------CCEEEEEEEETTT--TEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCC------CCeEEEEEEECCC--CEE
Confidence 478999998743 3344432211 1100000122222222 45 5666666532 3799999999633 445
Q ss_pred EEEEEeecCCCceeEEEEEecCCeEEEEec------------------CCeEEEEECC
Q 048458 321 INLFTVDLRAQFAWQYLGFGANDEVMLRND------------------DGELVLYDHK 360 (386)
Q Consensus 321 ~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~------------------~~~l~~ydl~ 360 (386)
..+.++.........-+.+.++|.+|+.+. .+.++.||+.
T Consensus 154 ~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 154 LHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 666666543322224566777888777542 2459999985
No 189
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=40.63 E-value=1.8e+02 Score=25.23 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=34.2
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEee
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKE 313 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~ 313 (386)
..|..||...+....+..|..... ..-..++..+|+|++..... ..+.++.++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~----~~~~~~~~~~g~L~v~~~~~--------~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAG----EHFEQIQEHDGLLYIGTLFH--------GSVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTT----SCCCEEEEETTEEEEECSSC--------SEEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCcc----ccceEEEEeCCEEEEeecCC--------CceEEEeccc
Confidence 579999999888888888764311 11223344688888876544 3676666653
No 190
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=40.14 E-value=1.8e+02 Score=25.04 Aligned_cols=109 Identities=13% Similarity=0.124 Sum_probs=56.2
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe----CCeEEEEEeeCCCCCCCCCC
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL----EKSIALFVSCHTEDNTAGLG 304 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~----~G~L~lv~~~~~~~~~~~~~ 304 (386)
-+|.+...+.. + +.|..+|+.+.......-.. .....+.-. +|...+++.. + .
T Consensus 178 ~~~~~l~~~~~-d------~~i~i~d~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~l~~~~~-d-------g 234 (357)
T 3i2n_A 178 QEERVVCAGYD-N------GDIKLFDLRNMALRWETNIK--------NGVCSLEFDRKDISMNKLVATSL-E-------G 234 (357)
T ss_dssp -CCCEEEEEET-T------SEEEEEETTTTEEEEEEECS--------SCEEEEEESCSSSSCCEEEEEES-T-------T
T ss_pred CCCCEEEEEcc-C------CeEEEEECccCceeeecCCC--------CceEEEEcCCCCCCCCEEEEECC-C-------C
Confidence 35665555444 2 68999999987754331111 112222322 4565555543 3 5
Q ss_pred EEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEEE-ecCCeEEEEECCCC
Q 048458 305 ICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VMLR-NDDGELVLYDHKTQ 362 (386)
Q Consensus 305 ~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l~-~~~~~l~~ydl~~~ 362 (386)
.+.+|-+............ ..... .....-+.+.+++. +++. ..++.+..||+++.
T Consensus 235 ~i~i~d~~~~~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASV-SEKAH-KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEEEEEEETTTEEEEE-EEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred eEEEEeCcCCCcccceeee-ccCCC-cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 8999988753211222211 11111 11225566677765 4443 44567888888753
No 191
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=40.09 E-value=2.4e+02 Score=28.20 Aligned_cols=23 Identities=13% Similarity=0.108 Sum_probs=15.4
Q ss_pred eEEEEec-CCeEEEEECCCCeEEE
Q 048458 344 EVMLRND-DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 344 ~i~l~~~-~~~l~~ydl~~~~~~~ 366 (386)
.||+... ..+|..+|..+++...
T Consensus 596 ~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 596 KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEEEEeCCCCeEEEEEccCCCceE
Confidence 4665543 4569999998777543
No 192
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=40.07 E-value=2.2e+02 Score=26.03 Aligned_cols=68 Identities=10% Similarity=0.097 Sum_probs=38.0
Q ss_pred CeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEE-EecCCeEEEEECCCCeE
Q 048458 286 KSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 286 G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
|++.+.+. .+ ..+.||.+... .-. .++.........-+++. ++..++ ...++.+.+||+++++.
T Consensus 210 ~~~l~s~~-~d-------~~i~vwd~~~~----~~~--~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSD-RD-------EHIKISHYPQC----FIV--DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEE-TT-------SCEEEEEESCT----TCE--EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred CcEEEEEc-CC-------CcEEEEECCCC----cee--eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 55555544 44 58999998741 111 11111111122456666 776554 44567899999999874
Q ss_pred -EEee
Q 048458 365 -VQCE 368 (386)
Q Consensus 365 -~~v~ 368 (386)
..+.
T Consensus 275 ~~~~~ 279 (450)
T 2vdu_B 275 LSTFD 279 (450)
T ss_dssp EEEEE
T ss_pred eeeec
Confidence 3343
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=39.15 E-value=2e+02 Score=25.36 Aligned_cols=131 Identities=8% Similarity=0.010 Sum_probs=63.3
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEE--CCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~ 271 (386)
...+.+|+.+++.-...-.... ..-.++.+ +|.....+.. + +.|..+|+.+..-..+ ......
T Consensus 219 Dg~v~~wd~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~-D------~~v~lwd~~~~~~~~~~~~~~~~-- 284 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAFETHE-----SDVNSVRYYPSGDAFASGSD-D------ATCRLYDLRADREVAIYSKESII-- 284 (354)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----SCEEEEEECTTSSEEEEEET-T------SCEEEEETTTTEEEEEECCTTCC--
T ss_pred CCeEEEEECCCCcEEEEecCCC-----CCeEEEEEeCCCCEEEEEeC-C------CeEEEEECCCCcEEEEEcCCCcc--
Confidence 4568888888765321110000 00112222 4554444433 2 6789999987643322 221111
Q ss_pred CCCccceeEEE-EeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-e
Q 048458 272 TDHIHRERSIG-ILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR-N 349 (386)
Q Consensus 272 ~~~~~~~~~L~-~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~-~ 349 (386)
.....+. ..+|++.++.... .++.||-+... ..+..+... .....-+++.++|..++. .
T Consensus 285 ----~~~~~~~~s~~g~~l~~g~~d--------~~i~vwd~~~~------~~~~~l~~h-~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 285 ----FGASSVDFSLSGRLLFAGYND--------YTINVWDVLKG------SRVSILFGH-ENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp ----SCEEEEEECTTSSEEEEEETT--------SCEEEEETTTC------SEEEEECCC-SSCEEEEEECTTSSCEEEEE
T ss_pred ----cceeEEEEeCCCCEEEEEECC--------CcEEEEECCCC------ceEEEEECC-CCcEEEEEECCCCCEEEEEc
Confidence 1111222 2257766665544 58999987531 122222211 112256777788865544 4
Q ss_pred cCCeEEEEE
Q 048458 350 DDGELVLYD 358 (386)
Q Consensus 350 ~~~~l~~yd 358 (386)
.++.+..||
T Consensus 346 ~D~~v~vW~ 354 (354)
T 2pbi_B 346 WDHTLRVWA 354 (354)
T ss_dssp TTSEEEEEC
T ss_pred CCCCEEecC
Confidence 456677664
No 194
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=38.72 E-value=3.1e+02 Score=27.31 Aligned_cols=32 Identities=9% Similarity=0.071 Sum_probs=22.9
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCCc--eeeee
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRYR 263 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~i 263 (386)
..+++.+|.+|.-+.+ +.|.++|..+. .|+.-
T Consensus 115 ~~~~~~~g~v~v~~~d--------g~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 115 RGVAVWKGKVYVGVLD--------GRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp CCCEEETTEEEEECTT--------SEEEEEETTTCCEEEEEE
T ss_pred CccEEECCEEEEEccC--------CEEEEEECCCCCEeeeec
Confidence 3457789999876544 78999998754 56553
No 195
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=37.90 E-value=2.3e+02 Score=25.67 Aligned_cols=135 Identities=10% Similarity=0.055 Sum_probs=64.4
Q ss_pred ceEEEEEcCCCceeecCCCCCCccccCCCceEEE---CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 048458 196 SDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHL---NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNT 272 (386)
Q Consensus 196 ~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 272 (386)
..+..++..++..+.+. .... ....++.+ +|.|||.... . ..|..+|+....-..+. ....
T Consensus 138 ~~I~r~~~~g~~~~~~~-~~~~----~~p~glavd~~~g~lY~~d~~-~------~~I~~~~~dg~~~~~l~-~~~l--- 201 (386)
T 3v65_B 138 DRILRANLNGSNVEEVV-STGL----ESPGGLAVDWVHDKLYWTDSG-T------SRIEVANLDGAHRKVLL-WQSL--- 201 (386)
T ss_dssp TEEEEEETTSCCEEEEE-CSSC----SCCCCEEEETTTTEEEEEETT-T------TEEEECBTTSCSCEEEE-CSSC---
T ss_pred CcEEEEecCCCCcEEEE-eCCC----CCccEEEEEeCCCeEEEEcCC-C------CeEEEEeCCCCceEEee-cCCC---
Confidence 45666777665544332 1101 11123333 6899998654 2 68999998765443332 1111
Q ss_pred CCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCcee-EEEEEec-CCeEEEE
Q 048458 273 DHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAW-QYLGFGA-NDEVMLR 348 (386)
Q Consensus 273 ~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~-~g~i~l~ 348 (386)
..-..|+.. +|.|+...... .-.|++.+-.+... . ..+. ....+ .-++++. ++.||+.
T Consensus 202 ---~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~---~-~~~~--~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 202 ---EKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGR---R-IIAD--THLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp ---SCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSC---E-EEEC--SSCSCEEEEEEEGGGTEEEEE
T ss_pred ---CCCcEEEEEcCCCeEEEeccCC---------CCEEEEEeCCCCCc---E-EEEE--CCCCCeeeEEEeCCCCEEEEE
Confidence 122334444 67777664322 13456665333211 1 0111 11111 4455653 4456665
Q ss_pred ec-CCeEEEEECCCCeE
Q 048458 349 ND-DGELVLYDHKTQEV 364 (386)
Q Consensus 349 ~~-~~~l~~ydl~~~~~ 364 (386)
.. ..++..+|++....
T Consensus 264 D~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 264 DAKHHVIERANLDGSHR 280 (386)
T ss_dssp ETTTTEEEEECTTSCSC
T ss_pred ECCCCEEEEEeCCCCee
Confidence 43 34577777765443
No 196
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=36.45 E-value=1.6e+02 Score=26.94 Aligned_cols=35 Identities=17% Similarity=0.426 Sum_probs=27.5
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCC
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRA 330 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~ 330 (386)
...+|+++.+.. .+.+|...+ ...|++.++.....
T Consensus 52 ~~~~~~~~~~~~--------~v~lw~~~~---~~~~~~~~~~~~~~ 86 (356)
T 2w18_A 52 CKEPCIITACED--------VVSLWKALD---AWQWEKLYTWHFAE 86 (356)
T ss_dssp -CEEEEEEEESS--------EEEEEEESS---SSBEEEEEEEECCS
T ss_pred CCccEEEEeccc--------eEEEcccCC---CccceeeEEEeccC
Confidence 367899999885 999999986 26799999876443
No 197
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=36.31 E-value=7.5 Score=35.77 Aligned_cols=30 Identities=0% Similarity=-0.043 Sum_probs=18.5
Q ss_pred ceEEECCeEEEEEEeecCCCCCceEEEEEECCCc--eeee
Q 048458 225 STVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRY 262 (386)
Q Consensus 225 ~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~ 262 (386)
.++..+|.+|.-..+ +.|.++|..+. .|+.
T Consensus 4 sP~v~~~~v~~gs~d--------g~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTLD--------GSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEETT--------SEEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcCC--------CEEEEEECCCCCEEEEe
Confidence 456677888876544 68999998754 4544
No 198
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=36.00 E-value=2.2e+02 Score=24.83 Aligned_cols=60 Identities=12% Similarity=0.064 Sum_probs=32.8
Q ss_pred CEEEEEEEeecCCCcceE-EEEEeecCCCceeEEEEEecCCeEEEE-ecCCeEEEEECCCCeE
Q 048458 304 GICSVYVMKENIEVEHWI-NLFTVDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDHKTQEV 364 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~-~~~~i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~~~~ 364 (386)
.++.||.+.+........ ...++... .....-+++.+++.+++. ..++.+..||+++++.
T Consensus 49 ~~v~iWd~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 49 KTVMIWKLYEEEQNGYFGIPHKALTGH-NHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTT 110 (343)
T ss_dssp SCEEEEEECSSCCSSBSEEEEEEECCC-SSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCE
T ss_pred CEEEEEECCcCCcccccccccchhccC-CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 589999987422111111 11222211 111255666777765554 4466799999988764
No 199
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=35.53 E-value=68 Score=29.10 Aligned_cols=102 Identities=15% Similarity=0.057 Sum_probs=44.2
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEEECCCceeee-ecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEE
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRY-RKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
.+|.+|.-..+ +.|.++|..+.+... +..+... .....++.+++... . ..+.
T Consensus 91 ~~~~v~~g~~d--------g~v~a~D~~tG~~~w~~~~~~~~----------~~~p~~~~v~~~~~-d--------g~v~ 143 (369)
T 2hz6_A 91 SDGILYMGKKQ--------DIWYVIDLLTGEKQQTLSSAFAD----------SLSPSTSLLYLGRT-E--------YTIT 143 (369)
T ss_dssp ----CCCCEEE--------EEEEEECCC--------------------------------EEEEEE-E--------EEEE
T ss_pred cCCEEEEEeCC--------CEEEEEECCCCcEEEEecCCCcc----------cccccCCEEEEEec-C--------CEEE
Confidence 57777754444 689999998654322 1222111 11113444444332 2 2444
Q ss_pred EEEEeecCCCcceEEEEEeecCCCceeEEEEEec----CCeEEEEecCCeEEEEECCCCeEEE
Q 048458 308 VYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA----NDEVMLRNDDGELVLYDHKTQEVVQ 366 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~----~g~i~l~~~~~~l~~ydl~~~~~~~ 366 (386)
.|-.+. .+..|.....- +...++.. ++.+++...++.++++|.++++..+
T Consensus 144 a~d~~t--G~~~W~~~~~~-------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 144 MYDTKT--RELRWNATYFD-------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp CCCSSS--SSCCCEEEEEE-------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred EEECCC--CCEEEeEeccc-------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 444432 23568765321 11111222 2567777777789999999888654
No 200
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=35.14 E-value=54 Score=24.50 Aligned_cols=40 Identities=8% Similarity=0.146 Sum_probs=27.7
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEE
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIV 181 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 181 (386)
+++++|.|+.|...-.... ...+ .+..|...+.|+|+...
T Consensus 13 V~~~d~~~~~W~p~~~~~g---------------------------~s~V-~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 13 VMVYDDANKKWVPAGGSTG---------------------------FSRV-HIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEETTTTEEEEGGGCCS---------------------------CEEE-EEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCceEECCCCCC---------------------------ceEE-EEEEECCCCEEEEEEEE
Confidence 7889999998864331111 1225 77788888899999865
No 201
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=34.85 E-value=2.3e+02 Score=24.71 Aligned_cols=90 Identities=11% Similarity=-0.008 Sum_probs=46.7
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+..-. .+..+... .....+.-. +|++.+++... ..+.||-+.. ......
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~~~------~~v~~~~~s~~g~~l~~g~~d--------~~i~vwd~~~------~~~~~~ 307 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDNII------CGITSVSFSKSGRLLLAGYDD--------FNCNVWDALK------ADRAGV 307 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTTCC------SCEEEEEECTTSSEEEEEETT--------SEEEEEETTT------CCEEEE
T ss_pred CcEEEEECCCCcEEEEEccCCcc------cceEEEEECCCCCEEEEECCC--------CeEEEEEccc------CcEeeE
Confidence 67999999876532 22322211 111222222 57766665544 5899997653 123333
Q ss_pred eecCCCceeEEEEEecCCeEEEE-ecCCeEEEEE
Q 048458 326 VDLRAQFAWQYLGFGANDEVMLR-NDDGELVLYD 358 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~yd 358 (386)
+.... ....-+++.++|..++. ..++.+..||
T Consensus 308 ~~~h~-~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 308 LAGHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eecCC-CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 33211 11255667777765444 4455677765
No 202
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=34.40 E-value=3.4e+02 Score=26.51 Aligned_cols=145 Identities=8% Similarity=0.005 Sum_probs=70.5
Q ss_pred cceEEEEEcCCC-ceeecCCCCCCccccCCCceEE-E--CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCC
Q 048458 195 FSDIQVYSLKNN-CWRRIQPNVPCIPCLSSNSTVH-L--NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLY 270 (386)
Q Consensus 195 ~~~~~vyss~~~-~W~~~~~~~p~~~~~~~~~~v~-~--~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~ 270 (386)
...+.+++..++ ..+.+................+ - ||.+.+.+.. + ....|..+|...+..+.+... .
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~----g~~~l~~~~~~~~~~~~l~~~--~- 354 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-D----GWNHLYLYDTTGRLIRQVTKG--E- 354 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-T----SSCEEEEEETTSCEEEECCCS--S-
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc-C----CccEEEEEECCCCEEEecCCC--C-
Confidence 457788888887 6655431000000000011222 2 7886665543 2 125788888777666655321 1
Q ss_pred CCCCccceeE-EEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEE
Q 048458 271 NTDHIHRERS-IGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VML 347 (386)
Q Consensus 271 ~~~~~~~~~~-L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l 347 (386)
..... ++-. +|+..++..... +.....||.++-.+ .... .+... .....+.++++|+ +++
T Consensus 355 -----~~v~~~~~~spdg~~l~~~~~~~-----~~~~~~l~~~d~~~--~~~~---~l~~~--~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 355 -----WEVTNFAGFDPKGTRLYFESTEA-----SPLERHFYCIDIKG--GKTK---DLTPE--SGMHRTQLSPDGSAIID 417 (706)
T ss_dssp -----SCEEEEEEECTTSSEEEEEESSS-----CTTCBEEEEEETTC--CCCE---ESCCS--SSEEEEEECTTSSEEEE
T ss_pred -----eEEEeeeEEcCCCCEEEEEecCC-----CCceEEEEEEEcCC--CCce---eccCC--CceEEEEECCCCCEEEE
Confidence 11112 2222 455444443332 11357788887322 2222 22211 1224567778885 444
Q ss_pred Ee-cC---CeEEEEECCCCeE
Q 048458 348 RN-DD---GELVLYDHKTQEV 364 (386)
Q Consensus 348 ~~-~~---~~l~~ydl~~~~~ 364 (386)
.. .. ..++.+|+++++.
T Consensus 418 ~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 418 IFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp EEECSSCSCEEEEEESSSCEE
T ss_pred EecCCCCCcEEEEEECCCCeE
Confidence 32 22 3599999998873
No 203
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=33.89 E-value=2.9e+02 Score=25.60 Aligned_cols=113 Identities=10% Similarity=0.163 Sum_probs=59.8
Q ss_pred ceEEEC-----CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCC
Q 048458 225 STVHLN-----GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTED 298 (386)
Q Consensus 225 ~~v~~~-----G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~ 298 (386)
.++.++ |.|||.... ..|..+|+.+.....+..+. ..-..++.. +|+|++.......
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~--------~~I~~id~~~g~v~~~~~~~--------~~P~giavd~dG~lyVad~~~~~- 204 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR--------DAFRHVDFVNQYVDIKTTNI--------GQCADVNFTLNGDMVVVDDQSSD- 204 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT--------SCEEEEETTTTEEEEECCCC--------SCEEEEEECTTCCEEEEECCSCT-
T ss_pred ceEEEccccCCCEEEEEeCC--------CCEEEEECCCCEEEEeecCC--------CCccEEEECCCCCEEEEcCCCCc-
Confidence 467776 889887543 57999999888777663211 112233333 5776666542210
Q ss_pred CCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEec-CCeEEEEec-CCeEEEEECCCCeE
Q 048458 299 NTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA-NDEVMLRND-DGELVLYDHKTQEV 364 (386)
Q Consensus 299 ~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~-~g~i~l~~~-~~~l~~ydl~~~~~ 364 (386)
..-.+..+... ..|.....+.... .. .-+++++ +|.||+... .++++.||+++++.
T Consensus 205 -----~~~gv~~~~~~---~~~~~~~~~~~~~-~P-~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 205 -----TNTGIYLFTRA---SGFTERLSLCNAR-GA-KTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp -----TSEEEEEECGG---GTTCCEEEEEECS-SB-CCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred -----ccceEEEEECC---CCeeccccccccC-CC-CEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 12223333322 2232111222111 00 3356676 667777653 45688888887766
No 204
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=33.69 E-value=55 Score=24.83 Aligned_cols=38 Identities=18% Similarity=0.489 Sum_probs=26.9
Q ss_pred EEEEccccc-cceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEE
Q 048458 114 MFVWNPSTR-KYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIV 181 (386)
Q Consensus 114 ~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 181 (386)
++++||.|+ .|...-... ..+ .+-+|+..+.|+|+++.
T Consensus 13 V~~~D~~tk~~W~p~g~~~-----------------------------~~V-~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 13 VFQIDPNTKKNWVPTSKHA-----------------------------VTV-SYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEECTTTSCSEEESCSSC-----------------------------EEE-EEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCCceEeCCCCc-----------------------------eEE-EEEEcCCCCEEEEEEcc
Confidence 889999996 896433221 224 56678888899999854
No 205
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=33.03 E-value=2.6e+02 Score=24.75 Aligned_cols=105 Identities=8% Similarity=0.060 Sum_probs=51.1
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEEe-CC-eEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEE
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGIL-EK-SIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLF 324 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~~-~G-~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~ 324 (386)
+.|..+|+.+.... .+..+.....+. .....+.-. +| .+.+...... ....+.+|-+..... .. .
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d~-----~~~~i~~~d~~~~~~-~~----~ 255 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSGIK--QQLSVVEWHPKNSTRVATATGSD-----NDPSILIWDLRNANT-PL----Q 255 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSCCC--CCEEEEEECSSCTTEEEEEECCS-----SSCCCCEEETTSTTS-CS----B
T ss_pred CCEEEEECCCCCcceEEeccccccccC--CceEEEEECCCCCCEEEEEECCC-----CCceEEEEeCCCCCC-Cc----E
Confidence 67999999876543 334432111100 122222322 34 4444444321 012789998874211 00 1
Q ss_pred EeecCCCceeEEEEEec-CCeEEE-EecCCeEEEEECCCCeE
Q 048458 325 TVDLRAQFAWQYLGFGA-NDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 325 ~i~~~~~~~~~~~~~~~-~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
.+.........-+++.+ ++.+++ ...++.+..||+++++.
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 11100111124556666 665444 44567799999988764
No 206
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=31.99 E-value=2.6e+02 Score=24.38 Aligned_cols=93 Identities=8% Similarity=-0.010 Sum_probs=48.3
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|...+....+.-.. .....+.-. +|++.+.+. .+ ..+.||-+..... .. ...
T Consensus 194 ~~i~iwd~~~~~~~~~~~h~--------~~v~~~~~s~~g~~l~sgs-~d-------g~v~iwd~~~~~~-~~----~~~ 252 (343)
T 2xzm_R 194 GRLKVWNTNFQIRYTFKAHE--------SNVNHLSISPNGKYIATGG-KD-------KKLLIWDILNLTY-PQ----REF 252 (343)
T ss_dssp SEEEEEETTTEEEEEEECCS--------SCEEEEEECTTSSEEEEEE-TT-------CEEEEEESSCCSS-CS----EEE
T ss_pred CEEEEEcCCCceeEEEcCcc--------ccceEEEECCCCCEEEEEc-CC-------CeEEEEECCCCcc-cc----eee
Confidence 67888996544333332111 112222222 566554444 44 5899998853211 11 111
Q ss_pred ecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCe
Q 048458 327 DLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQE 363 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~ 363 (386)
... ....-+++.+++.++....++.+..||+.+++
T Consensus 253 ~~~--~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 253 DAG--STINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp ECS--SCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred cCC--CcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 111 11255667777766655555668888887765
No 207
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=31.73 E-value=2.8e+02 Score=24.77 Aligned_cols=94 Identities=9% Similarity=0.098 Sum_probs=50.7
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+......- .... .....+.-. +|...+.+. .+ .++.+|-+.. .. ...++
T Consensus 145 ~~i~iwd~~~~~~~~~~-~~h~------~~v~~~~~~p~~~~l~s~s-~d-------~~v~iwd~~~----~~--~~~~~ 203 (393)
T 1erj_A 145 RLIRIWDIENRKIVMIL-QGHE------QDIYSLDYFPSGDKLVSGS-GD-------RTVRIWDLRT----GQ--CSLTL 203 (393)
T ss_dssp SCEEEEETTTTEEEEEE-CCCS------SCEEEEEECTTSSEEEEEE-TT-------SEEEEEETTT----TE--EEEEE
T ss_pred CeEEEEECCCCcEEEEE-ccCC------CCEEEEEEcCCCCEEEEec-CC-------CcEEEEECCC----Ce--eEEEE
Confidence 67999999877653321 1111 122223222 455544444 44 5899997763 22 22233
Q ss_pred ecCCCceeEEEEEec-CCeEEE-EecCCeEEEEECCCCeE
Q 048458 327 DLRAQFAWQYLGFGA-NDEVML-RNDDGELVLYDHKTQEV 364 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~-~g~i~l-~~~~~~l~~ydl~~~~~ 364 (386)
.... ....+++.+ ++.+++ ...++.+..||+++++.
T Consensus 204 ~~~~--~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 204 SIED--GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp ECSS--CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred EcCC--CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 3222 124556665 665544 44566799999988764
No 208
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=31.06 E-value=4.1e+02 Score=26.45 Aligned_cols=106 Identities=8% Similarity=0.121 Sum_probs=57.4
Q ss_pred EEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEe
Q 048458 233 VHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMK 312 (386)
Q Consensus 233 lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~ 312 (386)
..|++.. ..+..||..+++|.. |..... .....+...+|.|.+.+. . .+..++
T Consensus 75 ~lWigT~--------~Gl~~yd~~~~~f~~---~~~~~~----~~i~~i~~~~g~lWigt~----------~--Gl~~~~ 127 (758)
T 3ott_A 75 YLYMGTD--------NGILVYNYRADRYEQ---PETDFP----TDVRTMALQGDTLWLGAL----------N--GLYTYQ 127 (758)
T ss_dssp EEEEEET--------TEEEEEETTTTEECC---CSCCCC----SCEEEEEEETTEEEEEET----------T--EEEEEE
T ss_pred cEEEEeC--------CCeEEEeCCCCEEEC---cccCCC----ceEEEEEecCCcEEEEcC----------C--cceeEe
Confidence 4577665 578999999998865 211111 112234455787776542 2 244454
Q ss_pred ecCCCcceEEEEEeecC-CCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEEee
Q 048458 313 ENIEVEHWINLFTVDLR-AQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 313 ~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~v~ 368 (386)
.. .++.......... ......-+..+.+|.+++.+. ..|+.||.++++++.+.
T Consensus 128 ~~--~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 128 LQ--SRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNGKFEGIP 181 (758)
T ss_dssp TT--TCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTTEEEEEC
T ss_pred CC--CCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCCceEEec
Confidence 31 1233322100000 111113455566778888875 45999999998876543
No 209
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=30.98 E-value=4.4e+02 Score=26.83 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=32.9
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCCCCCccceeEEEEeCCeEEEEEee
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYNTDHIHRERSIGILEKSIALFVSC 294 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~ 294 (386)
+|.|||.... . ..|.++|+....-+.+ .-+... ..-..|+..+++|+++-..
T Consensus 569 ~~~LYwaD~~-~------~~I~~~d~dG~~~~~v~~~~~~l------~~P~glav~~~~lYwtD~~ 621 (791)
T 3m0c_C 569 SGRLYWVDSK-L------HSISSIDVNGGNRKTILEDEKRL------AHPFSLAVFEDKVFWTDII 621 (791)
T ss_dssp TTEEEEEETT-T------TEEEEEETTSCSCEEEEECTTTT------SSEEEEEEETTEEEEEETT
T ss_pred CCeEEEEeCC-C------CcEEEEecCCCceEEEecCCCcc------CCCCEEEEeCCEEEEEECC
Confidence 5899998544 2 6899999986554444 322222 2234666788888877653
No 210
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=30.03 E-value=4.2e+02 Score=26.32 Aligned_cols=142 Identities=8% Similarity=0.042 Sum_probs=74.7
Q ss_pred eEEEEEcCCCceeecCCCCCCccccCCCceEEEC-CeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCc
Q 048458 197 DIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLN-GAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHI 275 (386)
Q Consensus 197 ~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 275 (386)
.+..|+..++..+... ..........-..++.+ .--.|++.. ..|..||..++.+..++.|.......
T Consensus 122 Gl~~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~-- 190 (758)
T 3ott_A 122 GLYTYQLQSRKLTSFD-TRRNGLPNNTIYSIIRTKDNQIYVGTY--------NGLCRYIPSNGKFEGIPLPVHSSQSN-- 190 (758)
T ss_dssp EEEEEETTTCCEEEEC-HHHHCCSCSCEEEEEECTTCCEEEEET--------TEEEEEETTTTEEEEECCCCCTTCSS--
T ss_pred cceeEeCCCCeEEEec-cCCCCcCCCeEEEEEEcCCCCEEEEeC--------CCHhhCccCCCceEEecCCCcccccc--
Confidence 5677887777766552 10000000011133443 233466655 57899999999998877664321111
Q ss_pred cceeEEEEe-CC-eEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCe
Q 048458 276 HRERSIGIL-EK-SIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGE 353 (386)
Q Consensus 276 ~~~~~L~~~-~G-~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~ 353 (386)
.....+.+. +| .|.+.+. . .++.++.. ...+.....+. .....-+..+.+|.+++.+. ..
T Consensus 191 ~~i~~i~~d~~~~~lWigt~--~----------Gl~~~~~~--~~~~~~~~~l~---~~~i~~i~~d~~g~lWigT~-~G 252 (758)
T 3ott_A 191 LFVNSLLEDTTRQCVWIGTE--G----------YLFQYFPS--TGQIKQTEAFH---NNSIKSLALDGNGDLLAGTD-NG 252 (758)
T ss_dssp CCEEEEEEETTTTEEEEEEE--E----------EEEEEETT--TTEEEEEEEEE---EEEEEEEEECTTCCEEEEET-TE
T ss_pred ceeEEEEEECCCCEEEEEEC--C----------CCeEEcCC--CCeEEeccCCC---CCeEEEEEEcCCCCEEEEeC-Cc
Confidence 123345555 33 4555331 1 24455531 23444332221 11113455566778999885 46
Q ss_pred EEEEECCCCeEEEe
Q 048458 354 LVLYDHKTQEVVQC 367 (386)
Q Consensus 354 l~~ydl~~~~~~~v 367 (386)
++.||.++++++.+
T Consensus 253 l~~~~~~~~~~~~~ 266 (758)
T 3ott_A 253 LYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEECCTTSCCEEE
T ss_pred eeEEecCCCcEEEE
Confidence 99999998877655
No 211
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=29.90 E-value=2.4e+02 Score=23.49 Aligned_cols=110 Identities=7% Similarity=0.020 Sum_probs=56.6
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
+|.+||.... . ....|..+++.....+.+.. ... ..-..++.. +++|++..... ..+
T Consensus 133 ~g~lyv~~~~-~----~~~~I~~~~~dg~~~~~~~~-~~~------~~P~gia~d~~~~~lyv~d~~~--------~~I- 191 (267)
T 1npe_A 133 RGNLYWTDWN-R----DNPKIETSHMDGTNRRILAQ-DNL------GLPNGLTFDAFSSQLCWVDAGT--------HRA- 191 (267)
T ss_dssp TTEEEEEECC-S----SSCEEEEEETTSCCCEEEEC-TTC------SCEEEEEEETTTTEEEEEETTT--------TEE-
T ss_pred CCEEEEEECC-C----CCcEEEEEecCCCCcEEEEE-CCC------CCCcEEEEcCCCCEEEEEECCC--------CEE-
Confidence 5889997643 1 12578899987655444321 111 112233333 56777766543 344
Q ss_pred EEEEeecCCCcceEEEEEeecCCCceeEEEEEec-CCeEEEEec-CCeEEEEECCCCeE-EEeee
Q 048458 308 VYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA-NDEVMLRND-DGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~-~g~i~l~~~-~~~l~~ydl~~~~~-~~v~~ 369 (386)
++++-.+ . .....+... . .|.++.. ++.+|+... ..++..+|+++++. +.+..
T Consensus 192 -~~~~~~g--~--~~~~~~~~~-~---~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 192 -ECLNPAQ--P--GRRKVLEGL-Q---YPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp -EEEETTE--E--EEEEEEECC-C---SEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred -EEEecCC--C--ceEEEecCC-C---CceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 4444211 1 111112211 1 2333332 456777654 46799999998774 55655
No 212
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=29.86 E-value=1.8e+02 Score=24.98 Aligned_cols=28 Identities=7% Similarity=0.089 Sum_probs=16.0
Q ss_pred EEEEecCCeEEEEecCCeEEEEECCCCe
Q 048458 336 YLGFGANDEVMLRNDDGELVLYDHKTQE 363 (386)
Q Consensus 336 ~~~~~~~g~i~l~~~~~~l~~ydl~~~~ 363 (386)
.+..+.+|.+++.+.++.+.....+..+
T Consensus 299 ~~~~d~~g~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 299 TPVIDENGTIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CCEECTTCCEEEECTTSCEEEEEC----
T ss_pred ceEEcCCCEEEEEcCCCeEEEEeccccc
Confidence 3445567788888777756666555443
No 213
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=29.68 E-value=3.1e+02 Score=24.69 Aligned_cols=50 Identities=10% Similarity=0.003 Sum_probs=27.4
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCCCccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEee
Q 048458 248 DIIVSFDFGDETFR-YRKLPDCLYNTDHIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKE 313 (386)
Q Consensus 248 ~~il~fD~~~~~~~-~i~~P~~~~~~~~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~ 313 (386)
+.|..+|+.+.... .+.-.. .....+.. -+|.+.+.+... ..+.+|.+..
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~--------~~v~~~~~~~~g~~l~s~s~D--------~~v~vwd~~~ 265 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHR--------EWVRMVRPNQDGTLIASCSND--------QTVRVWVVAT 265 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCS--------SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEeCCC--------ccEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 68999999876532 222111 11122222 256665555544 5899998763
No 214
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=29.22 E-value=2.6e+02 Score=23.52 Aligned_cols=136 Identities=10% Similarity=-0.015 Sum_probs=63.1
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE--ECCeEEEEEEeecCCCCCceEEEEEECCCceeeee-cCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH--LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYR-KLPDCLYN 271 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~ 271 (386)
...+.+|+..++.-...- ...... ..-.++. -+|.....+.. + +.|..+|+.+++.... .-..
T Consensus 44 D~tV~iWd~~tg~~~~~~-~~~~~~--~~V~~v~~~~~~~~l~sgs~-D------g~v~iw~~~~~~~~~~~~~h~---- 109 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLL-QMEQPG--EYISSVAWIKEGNYLAVGTS-S------AEVQLWDVQQQKRLRNMTSHS---- 109 (318)
T ss_dssp TTEEEEEETTTCCEEEEE-ECCSTT--CCEEEEEECTTSSEEEEEET-T------SEEEEEETTTTEEEEEEECCS----
T ss_pred CCEEEEEECCCCCEEEEE-EecCCC--CeEEEEEECCCCCEEEEEEC-C------CcEEEeecCCceeEEEecCcc----
Confidence 346899998887543221 111000 0001222 24554444433 2 6899999998765332 2111
Q ss_pred CCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE-ec
Q 048458 272 TDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR-ND 350 (386)
Q Consensus 272 ~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~-~~ 350 (386)
....-...++.+.+... .. ..+.+|.... ............. ....+....++..++. ..
T Consensus 110 -----~~~~~~~~~~~~l~s~~-~~-------~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 110 -----ARVGSLSWNSYILSSGS-RS-------GHIHHHDVRV-----AEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp -----SCEEEEEEETTEEEEEE-TT-------SEEEEEETTS-----SSCEEEEEECCSS-CEEEEEECTTSSEEEEEET
T ss_pred -----ceEEEeecCCCEEEEEe-cC-------CceEeeecCC-----CceeEEEEcCccC-ceEEEEEcCCCCEEEEEec
Confidence 11122333455444433 33 4666665542 1122222221111 1134455556654443 34
Q ss_pred CCeEEEEECCCCe
Q 048458 351 DGELVLYDHKTQE 363 (386)
Q Consensus 351 ~~~l~~ydl~~~~ 363 (386)
++.+..||+++++
T Consensus 171 d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 171 DNLVNVWPSAPGE 183 (318)
T ss_dssp TSCEEEEESSCBT
T ss_pred CcceeEEECCCCc
Confidence 5568888887654
No 215
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=29.18 E-value=74 Score=23.85 Aligned_cols=42 Identities=7% Similarity=0.202 Sum_probs=28.6
Q ss_pred EEEEccccccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEE
Q 048458 114 MFVWNPSTRKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVH 182 (386)
Q Consensus 114 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~ 182 (386)
+++++|.|+.|. |...... ....+ .+..|...+.|.|+....
T Consensus 13 V~~~d~~~~~W~--p~~~g~~------------------------gvs~V-~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 13 VMLYDDGNKRWL--PAGTGPQ------------------------AFSRV-QIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp CBEECTTTSSCC--BSSCSCC------------------------CCEEE-EEEEETTTTEEEEEEEES
T ss_pred EEEEcCCCCcee--ECCCCCC------------------------CccEE-EEEEeCCCCEEEEEEEEc
Confidence 788899999985 4332110 11235 777898889999998664
No 216
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=28.80 E-value=3e+02 Score=24.19 Aligned_cols=65 Identities=8% Similarity=0.088 Sum_probs=40.0
Q ss_pred CCeEEEEEeeCCCCCCCCCCE-EEEEEEeecCCCcceEEEEEeecC-CCceeEEEEEecCCeEEEE-ecCCeEEEEECCC
Q 048458 285 EKSIALFVSCHTEDNTAGLGI-CSVYVMKENIEVEHWINLFTVDLR-AQFAWQYLGFGANDEVMLR-NDDGELVLYDHKT 361 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~-i~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl~~ 361 (386)
+|++.+.+... .+ +.||-+.. ...+.++... ......-+++.++|..++. ..++.+..||+++
T Consensus 206 ~g~~l~s~s~d--------~~~v~iwd~~~------~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 206 KSDMVATCSQD--------GTIIRVFKTED------GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp TSSEEEEEETT--------CSEEEEEETTT------CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCCEEEEEeCC--------CCEEEEEECCC------CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 56665555543 46 99998773 2344555421 1122256777888875554 4566799999977
Q ss_pred Ce
Q 048458 362 QE 363 (386)
Q Consensus 362 ~~ 363 (386)
..
T Consensus 272 ~~ 273 (355)
T 3vu4_A 272 DQ 273 (355)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 217
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=28.43 E-value=3.1e+02 Score=24.27 Aligned_cols=142 Identities=11% Similarity=-0.000 Sum_probs=68.0
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEE--ECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVH--LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNT 272 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 272 (386)
...+.+++..++.-...- .... .-..+. -||.+...+.. ..+..++..+.............
T Consensus 156 d~~i~iwd~~~~~~~~~~-~~~~-----~V~~v~fspdg~~l~s~s~--------~~~~~~~~~~~~~~~~~~~~~~~-- 219 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEI-ETRG-----EVKDLHFSTDGKVVAYITG--------SSLEVISTVTGSCIARKTDFDKN-- 219 (365)
T ss_dssp SCEEEEEETTTTEEEEEE-ECSS-----CCCEEEECTTSSEEEEECS--------SCEEEEETTTCCEEEEECCCCTT--
T ss_pred CCEEEEeECCCCcEEEEe-CCCC-----ceEEEEEccCCceEEeccc--------eeEEEEEeccCcceeeeecCCCC--
Confidence 456778887776533221 1000 011222 25655444333 45677777766544332221111
Q ss_pred CCccceeEEE-EeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEE--EEeecCCCceeEEEEEecCCeEEEE-
Q 048458 273 DHIHRERSIG-ILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINL--FTVDLRAQFAWQYLGFGANDEVMLR- 348 (386)
Q Consensus 273 ~~~~~~~~L~-~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~--~~i~~~~~~~~~~~~~~~~g~i~l~- 348 (386)
.....+. .-+|+..+....... ....+.+|.+.. ...... ..+.... ....-+++.++|.++..
T Consensus 220 ---~~v~~v~fspdg~~l~~~s~d~~----~~~~i~~~~~~~----~~~~~~~~~~~~~~~-~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 220 ---WSLSKINFIADDTVLIAASLKKG----KGIVLTKISIKS----GNTSVLRSKQVTNRF-KGITSMDVDMKGELAVLA 287 (365)
T ss_dssp ---EEEEEEEEEETTEEEEEEEESSS----CCEEEEEEEEET----TEEEEEEEEEEESSC-SCEEEEEECTTSCEEEEE
T ss_pred ---CCEEEEEEcCCCCEEEEEecCCc----ceeEEeeccccc----ceecceeeeeecCCC-CCeEeEEECCCCCceEEE
Confidence 1222222 236777666654431 112344454442 222222 2222211 12256778888876554
Q ss_pred ecCCeEEEEECCCCeE
Q 048458 349 NDDGELVLYDHKTQEV 364 (386)
Q Consensus 349 ~~~~~l~~ydl~~~~~ 364 (386)
..++.+.+||+++++.
T Consensus 288 s~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSM 303 (365)
T ss_dssp ETTSCEEEEETTTTEE
T ss_pred cCCCEEEEEECCCCcE
Confidence 4566799999999875
No 218
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=28.02 E-value=3.4e+02 Score=24.53 Aligned_cols=136 Identities=10% Similarity=0.047 Sum_probs=63.1
Q ss_pred cceEEEEEcCCCceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeee-ecCCCCCCCCC
Q 048458 195 FSDIQVYSLKNNCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRY-RKLPDCLYNTD 273 (386)
Q Consensus 195 ~~~~~vyss~~~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~ 273 (386)
...+.+|+..++.-...-.... ..-.++..+|.+...+.. + +.|..+|+.+..... +....
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~sg~~-d------g~i~vwd~~~~~~~~~~~~h~------ 213 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGHT-----GSVLCLQYDERVIITGSS-D------STVRVWDVNTGEMLNTLIHHC------ 213 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCCS-----SCEEEEECCSSEEEEEET-T------SCEEEEESSSCCEEEEECCCC------
T ss_pred CCeEEEEeCCCCeEEEEEcCCC-----CcEEEEEECCCEEEEEcC-C------CeEEEEECCCCcEEEEEcCCC------
Confidence 4467888877653211110000 011234457776655554 3 689999998765432 22111
Q ss_pred CccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCe
Q 048458 274 HIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGE 353 (386)
Q Consensus 274 ~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~ 353 (386)
..... ...++.+.+.+. .+ ..+.+|.++.. ........+.... .....+.+ .++.++....++.
T Consensus 214 --~~v~~-l~~~~~~l~s~s-~d-------g~i~vwd~~~~---~~~~~~~~~~~~~-~~v~~~~~-~~~~l~s~~~dg~ 277 (435)
T 1p22_A 214 --EAVLH-LRFNNGMMVTCS-KD-------RSIAVWDMASP---TDITLRRVLVGHR-AAVNVVDF-DDKYIVSASGDRT 277 (435)
T ss_dssp --SCEEE-EECCTTEEEEEE-TT-------SCEEEEECSSS---SCCEEEEEECCCS-SCEEEEEE-ETTEEEEEETTSE
T ss_pred --CcEEE-EEEcCCEEEEee-CC-------CcEEEEeCCCC---CCceeeeEecCCC-CcEEEEEe-CCCEEEEEeCCCe
Confidence 11222 233444444443 34 58999988742 1222212221111 11122222 1223444445566
Q ss_pred EEEEECCCCeE
Q 048458 354 LVLYDHKTQEV 364 (386)
Q Consensus 354 l~~ydl~~~~~ 364 (386)
+..||+++++.
T Consensus 278 i~vwd~~~~~~ 288 (435)
T 1p22_A 278 IKVWNTSTCEF 288 (435)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCcCcE
Confidence 77777777654
No 219
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.98 E-value=59 Score=22.25 Aligned_cols=21 Identities=14% Similarity=0.341 Sum_probs=16.2
Q ss_pred EEEEecCCeEEEEECCCCeEE
Q 048458 345 VMLRNDDGELVLYDHKTQEVV 365 (386)
Q Consensus 345 i~l~~~~~~l~~ydl~~~~~~ 365 (386)
....+.++++|+||..|++-.
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRLSM 43 (73)
T ss_dssp EEEEESSSCEEEEETTTTEEC
T ss_pred EEEECCCCCEEEecCccccee
Confidence 444566788999999999853
No 220
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=27.77 E-value=3e+02 Score=23.82 Aligned_cols=90 Identities=13% Similarity=0.106 Sum_probs=47.7
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe-CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEe
Q 048458 248 DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL-EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTV 326 (386)
Q Consensus 248 ~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i 326 (386)
+.|..+|+.+...... +.... .....+.-. +|+..+... .+ .++.||.++. ...+.++
T Consensus 228 g~i~iwd~~~~~~~~~-~~~h~------~~v~~~~~sp~~~~l~s~s-~D-------~~v~iwd~~~------~~~~~~~ 286 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGT-LSGHA------SWVLNVAFCPDDTHFVSSS-SD-------KSVKVWDVGT------RTCVHTF 286 (321)
T ss_dssp SCEEEEETTTCCEEEE-ECCCS------SCEEEEEECTTSSEEEEEE-TT-------SCEEEEETTT------TEEEEEE
T ss_pred CeEEEEECCCcceeEE-EcCCC------CceEEEEECCCCCEEEEEe-CC-------CcEEEEeCCC------CEEEEEE
Confidence 6799999987654322 11111 122233323 566544444 44 5899998763 2333443
Q ss_pred ecCCCceeEEEEEecCCeEEEE-ecCCeEEEEEC
Q 048458 327 DLRAQFAWQYLGFGANDEVMLR-NDDGELVLYDH 359 (386)
Q Consensus 327 ~~~~~~~~~~~~~~~~g~i~l~-~~~~~l~~ydl 359 (386)
.... ....-+++.+++..++. ..++.+..||.
T Consensus 287 ~~h~-~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 287 FDHQ-DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CCCS-SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred cCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 2211 11245666777765554 45567888885
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=27.14 E-value=2.7e+02 Score=23.16 Aligned_cols=109 Identities=11% Similarity=-0.052 Sum_probs=56.6
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
+|.+||.... . +.|..+|+.+.....+. +.... .-..++.. +|.|++..... ..+.
T Consensus 47 ~~~ly~~d~~-~------~~I~~~~~~g~~~~~~~-~~~~~------~p~~ia~d~~~~~lyv~d~~~--------~~I~ 104 (267)
T 1npe_A 47 DKVVYWTDIS-E------PSIGRASLHGGEPTTII-RQDLG------SPEGIALDHLGRTIFWTDSQL--------DRIE 104 (267)
T ss_dssp TTEEEEEETT-T------TEEEEEESSSCCCEEEE-CTTCC------CEEEEEEETTTTEEEEEETTT--------TEEE
T ss_pred CCEEEEEECC-C------CEEEEEecCCCCcEEEE-ECCCC------CccEEEEEecCCeEEEEECCC--------CEEE
Confidence 5789997654 2 68999999876543332 11111 12233443 57777665433 3554
Q ss_pred EEEEeecCCCcceEEEEEeecCCCceeEEEEEec-CCeEEEEecC---CeEEEEECCCCeEEEe
Q 048458 308 VYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGA-NDEVMLRNDD---GELVLYDHKTQEVVQC 367 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~-~g~i~l~~~~---~~l~~ydl~~~~~~~v 367 (386)
+..++ +.. .+. .+....... .-+++++ ++.+|+.... .++..++++....+.+
T Consensus 105 ~~~~~--g~~---~~~-~~~~~~~~P-~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 105 VAKMD--GTQ---RRV-LFDTGLVNP-RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EEETT--SCS---CEE-EECSSCSSE-EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred EEEcC--CCC---EEE-EEECCCCCc-cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 44433 211 111 111111111 4567776 4677776542 4688888877654443
No 222
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.74 E-value=5.2e+02 Score=26.29 Aligned_cols=54 Identities=7% Similarity=-0.057 Sum_probs=31.5
Q ss_pred eEEE---CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEe
Q 048458 226 TVHL---NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVS 293 (386)
Q Consensus 226 ~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~ 293 (386)
++.+ +|.|||.... . ..|.++|+.....+.+.. ... ..-..|++. +|.|++.-.
T Consensus 475 GLAvD~~~~~LY~tD~~-~------~~I~v~~ldG~~~~~l~~-~~l------~~P~gIaVDp~~g~LYwtD~ 533 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSV-L------GTVSVADTKGVKRKTLFR-ENG------SKPRAIVVDPVHGFMYWTDW 533 (791)
T ss_dssp EEEEETTTTEEEEEETT-T------TEEEEEETTSSSEEEEEE-CTT------CCEEEEEEETTTTEEEEEEC
T ss_pred eeeeeecCCcEEEEecC-C------CeEEEEeCCCCeEEEEEe-CCC------CCcceEEEecCCCCEEEecC
Confidence 5555 4699998654 2 689999998765544421 111 112244443 577777654
No 223
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=26.52 E-value=3.4e+02 Score=24.08 Aligned_cols=108 Identities=8% Similarity=0.038 Sum_probs=54.5
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
+|.+||.... . ..|..+|+....-..+. .... ..-..++.. +|.|+...... .-.
T Consensus 127 ~g~ly~~d~~-~------~~I~~~~~dG~~~~~l~-~~~l------~~P~~iavdp~~g~ly~td~~~---------~~~ 183 (349)
T 3v64_C 127 HDKLYWTDSG-T------SRIEVANLDGAHRKVLL-WQSL------EKPRAIALHPMEGTIYWTDWGN---------TPR 183 (349)
T ss_dssp TTEEEEEETT-T------TEEEEEETTSCSCEEEE-CTTC------SCEEEEEEETTTTEEEEEECSS---------SCE
T ss_pred CCeEEEEcCC-C------CeEEEEcCCCCceEEEE-eCCC------CCcceEEEecCcCeEEEeccCC---------CCE
Confidence 6899998654 2 68999999866544332 1121 122344444 67777665432 133
Q ss_pred EEEEeecCCCcceEEEEEeecCCCcee-EEEEEec-CCeEEEEec-CCeEEEEECCCCeEEE
Q 048458 308 VYVMKENIEVEHWINLFTVDLRAQFAW-QYLGFGA-NDEVMLRND-DGELVLYDHKTQEVVQ 366 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~-~g~i~l~~~-~~~l~~ydl~~~~~~~ 366 (386)
|++.+-++... + .+- .....+ .-++++. ++.||+... ..++..+|++....+.
T Consensus 184 I~r~~~dG~~~---~--~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~ 239 (349)
T 3v64_C 184 IEASSMDGSGR---R--IIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA 239 (349)
T ss_dssp EEEEETTSCSC---E--ESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEeCCCCCc---E--EEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE
Confidence 55555332211 0 110 011111 4456664 445666543 3457777777654333
No 224
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=26.51 E-value=4.4e+02 Score=25.40 Aligned_cols=31 Identities=6% Similarity=0.045 Sum_probs=22.5
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCCc--eeee
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRY 262 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~ 262 (386)
..+++.+|.+|.-..+ +.+.++|..+. .|+.
T Consensus 109 ~~~~~~~~~v~v~~~d--------g~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 109 RGLAYGAGQIVKKQAN--------GHLLALDAKTGKINWEV 141 (571)
T ss_dssp CCCEEETTEEEEECTT--------SEEEEEETTTCCEEEEE
T ss_pred cccEEECCEEEEEeCC--------CEEEEEECCCCCEEEEe
Confidence 3467789999876544 68999998754 5653
No 225
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=26.35 E-value=3.3e+02 Score=23.88 Aligned_cols=112 Identities=9% Similarity=0.037 Sum_probs=0.0
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVY 309 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW 309 (386)
+|.+||.... . ..|..+|+.+.............. .....+-..+|.|++...... .+.+.
T Consensus 46 ~~~lyw~D~~-~------~~I~r~~~~g~~~~~~~~~~~l~~----p~glavd~~~g~ly~~d~~~~--------~I~~~ 106 (318)
T 3sov_A 46 HGLIYWSDVS-E------EAIKRTEFNKTESVQNVVVSGLLS----PDGLACDWLGEKLYWTDSETN--------RIEVS 106 (318)
T ss_dssp GTEEEEEETT-T------TEEEEEETTSSSCCCEEEEECCSC----CCEEEEETTTTEEEEEETTTT--------EEEEE
T ss_pred CCEEEEEECC-C------CcEEEEEccCCCceEEEEcCCCCC----ccEEEEEcCCCeEEEEECCCC--------EEEEE
Q ss_pred EEeecCCCcceEEEEEeecCCCceeEEEEEe-cCCeEEEEe--cCCeEEEEECCCCeEEEe
Q 048458 310 VMKENIEVEHWINLFTVDLRAQFAWQYLGFG-ANDEVMLRN--DDGELVLYDHKTQEVVQC 367 (386)
Q Consensus 310 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~~g~i~l~~--~~~~l~~ydl~~~~~~~v 367 (386)
.++ ....+...-...... .-++++ .+|.+|+.. ...++..++++....+.+
T Consensus 107 ~~d-----G~~~~~l~~~~~~~P--~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 107 NLD-----GSLRKVLFWQELDQP--RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp ETT-----SCSCEEEECSSCSSE--EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ECC-----CCcEEEEEeCCCCCc--cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
No 226
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=26.07 E-value=3.1e+02 Score=23.50 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=20.8
Q ss_pred EEEEecCCeEEEEec-CCeEEEEECCCCe
Q 048458 336 YLGFGANDEVMLRND-DGELVLYDHKTQE 363 (386)
Q Consensus 336 ~~~~~~~g~i~l~~~-~~~l~~ydl~~~~ 363 (386)
-++++++|.+|+... ..++..||++.+.
T Consensus 216 gi~vd~dG~l~va~~~~~~V~~~~~~G~~ 244 (306)
T 2p4o_A 216 DFAFDVEGNLYGATHIYNSVVRIAPDRST 244 (306)
T ss_dssp SEEEBTTCCEEEECBTTCCEEEECTTCCE
T ss_pred CeEECCCCCEEEEeCCCCeEEEECCCCCE
Confidence 467788888888764 4569999997443
No 227
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=26.00 E-value=3.3e+02 Score=23.70 Aligned_cols=110 Identities=7% Similarity=-0.036 Sum_probs=57.0
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEe--CCeEEEEEeeCCCCCCCCCCEE
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGIL--EKSIALFVSCHTEDNTAGLGIC 306 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~~~~~~~~~~~i 306 (386)
.+|.+||.... . ..|.++|+.......+-- ... ..-..++.. +|.|++...... -
T Consensus 87 ~~~~ly~~d~~-~------~~I~~~~~~g~~~~~~~~-~~~------~~P~~iavdp~~g~ly~~d~~~~---------~ 143 (316)
T 1ijq_A 87 IHSNIYWTDSV-L------GTVSVADTKGVKRKTLFR-ENG------SKPRAIVVDPVHGFMYWTDWGTP---------A 143 (316)
T ss_dssp TTTEEEEEETT-T------TEEEEEETTSSSEEEEEE-CTT------CCEEEEEEETTTTEEEEEECSSS---------C
T ss_pred cCCeEEEEECC-C------CEEEEEeCCCCceEEEEE-CCC------CCcceEEeCCCCCEEEEEccCCC---------C
Confidence 36899998654 2 689999998765443321 111 122244443 677776653221 2
Q ss_pred EEEEEeecCCCcceEEEEEeecCCCcee-EEEEEec-CCeEEEEec-CCeEEEEECCCCeEEEe
Q 048458 307 SVYVMKENIEVEHWINLFTVDLRAQFAW-QYLGFGA-NDEVMLRND-DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 307 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~-~g~i~l~~~-~~~l~~ydl~~~~~~~v 367 (386)
.|++++-++.. .+ .+-. ....+ .-++++. ++.||+... ..++..+|++.+..+.+
T Consensus 144 ~I~~~~~dG~~---~~--~~~~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 144 KIKKGGLNGVD---IY--SLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp EEEEEETTSCC---EE--EEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eEEEEcCCCCC---eE--EEEE-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 35665532221 11 1111 11121 4566665 446766653 34688888876655444
No 228
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=25.93 E-value=4.5e+02 Score=25.29 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=23.7
Q ss_pred EEEEEecCCeEEEEec-CC--eEEEEECCCCeEEEe
Q 048458 335 QYLGFGANDEVMLRND-DG--ELVLYDHKTQEVVQC 367 (386)
Q Consensus 335 ~~~~~~~~g~i~l~~~-~~--~l~~ydl~~~~~~~v 367 (386)
.-...++||++++... ++ +++.+|+++++++.+
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l 280 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL 280 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECCCCceeec
Confidence 4455677888776654 33 699999998888765
No 229
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=25.76 E-value=85 Score=25.35 Aligned_cols=38 Identities=18% Similarity=0.489 Sum_probs=26.8
Q ss_pred EEEEccccc-cceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEE
Q 048458 114 MFVWNPSTR-KYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIV 181 (386)
Q Consensus 114 ~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 181 (386)
+++++|.|+ .|+..-... ..+ .+-+|...+.|+|+.+.
T Consensus 18 Vm~~D~~tk~~WvP~g~~~-----------------------------~~V-~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 18 VFQIDPNTKKNWVPTSKHA-----------------------------VTV-SYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEECTTSSCCSEESCSSC-----------------------------EEE-EEEEETTTTEEEEEEEE
T ss_pred EEEECCCCCCceeecCCCC-----------------------------eEE-EEEEcCCCCEEEEEEcc
Confidence 889999997 896432221 224 56688888889999854
No 230
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=25.54 E-value=60 Score=29.55 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=21.6
Q ss_pred cCCeEEEEecCCeEEEEECCCCeEEEee
Q 048458 341 ANDEVMLRNDDGELVLYDHKTQEVVQCE 368 (386)
Q Consensus 341 ~~g~i~l~~~~~~l~~ydl~~~~~~~v~ 368 (386)
.+|.||....++++++.|+++++..+-.
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3556777777788999999999976643
No 231
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=25.46 E-value=5.7e+02 Score=26.28 Aligned_cols=109 Identities=9% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEE
Q 048458 230 NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVY 309 (386)
Q Consensus 230 ~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW 309 (386)
+|.+...+.. + +.|..+|..+.......-.... -....... |+ .++....+ .++.||
T Consensus 28 dg~~lAsgs~-D------g~I~lw~~~~~~~~~~~~~~~~------V~~l~fsp--g~-~L~S~s~D-------~~v~lW 84 (902)
T 2oaj_A 28 TQNLLAIATV-T------GEVHIYGQQQVEVVIKLEDRSA------IKEMRFVK--GI-YLVVINAK-------DTVYVL 84 (902)
T ss_dssp TTTEEEEEET-T------SEEEEECSTTCEEEEECSSCCC------EEEEEEET--TT-EEEEEETT-------CEEEEE
T ss_pred CCCEEEEEeC-C------CEEEEEeCCCcEEEEEcCCCCC------EEEEEEcC--CC-EEEEEECc-------CeEEEE
Q ss_pred EEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEecCCeEEEEECCCCeEEEeee
Q 048458 310 VMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRNDDGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 310 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~~~~~l~~ydl~~~~~~~v~~ 369 (386)
.++. .+-...+.-.... ..+++.+++ .++....++.+..||+++++.....+
T Consensus 85 d~~~----~~~~~~~~~~~~V----~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 85 SLYS----QKVLTTVFVPGKI----TSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp ETTT----CSEEEEEECSSCE----EEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred ECCC----CcEEEEEcCCCCE----EEEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
No 232
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=24.29 E-value=3.1e+02 Score=27.34 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=47.6
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEE-ECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEE
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSF-DFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICS 307 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~f-D~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~ 307 (386)
-||.|.+-......+. .....+.| |=...+|+.-....... ..+..++|.+|+|.+...+.. ....
T Consensus 200 ~dGtLVfPv~~~~~~g-~~~s~iiySdD~G~TW~ls~~~~~~g-----c~EpsVvEwdG~Lmm~~R~~~-------g~R~ 266 (648)
T 1ms9_A 200 SNGNLVYPVQVTNKKK-QVFSKIFYSEDEGKTWKFGKGRSAFG-----CSEPVALEWEGKLIINTRVDY-------RRRL 266 (648)
T ss_dssp TTSCEEEEEEEEETTC-CEEEEEEEESSTTSSCEECSCCCCTT-----EEEEEEEEETTEEEEEEEETT-------SCCC
T ss_pred cCCcEEEEEEEEcccc-cceeeEEEecCCCCCEEECCCCCCCC-----ccceEEEEECCEEEEEEEccC-------CcEE
Confidence 3688777654411111 11233333 44567798874332221 578899999999988888765 3444
Q ss_pred EEEEeecCCCcceEEEE
Q 048458 308 VYVMKENIEVEHWINLF 324 (386)
Q Consensus 308 iW~l~~~~~~~~W~~~~ 324 (386)
++.-.|. .+.|++..
T Consensus 267 Vy~S~D~--G~TWte~~ 281 (648)
T 1ms9_A 267 VYESSDM--GNTWLEAV 281 (648)
T ss_dssp EEEESST--TSSCEECT
T ss_pred EEEecCC--Cccccccc
Confidence 5555543 36899754
No 233
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=24.27 E-value=3.3e+02 Score=23.14 Aligned_cols=72 Identities=18% Similarity=0.195 Sum_probs=41.4
Q ss_pred CCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCe-EEE-EecCCeEEEEEC-CC
Q 048458 285 EKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDE-VML-RNDDGELVLYDH-KT 361 (386)
Q Consensus 285 ~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~-i~l-~~~~~~l~~ydl-~~ 361 (386)
+|.+.++.. .+ ..+.||.++... ..-.......... ...-+++.+++. .++ ...++.+..||+ ++
T Consensus 22 ~~~~l~~~~-~d-------~~v~iw~~~~~~--~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITS-WD-------GSLTVYKFDIQA--KNVDLLQSLRYKH--PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEE-TT-------SEEEEEEEETTT--TEEEEEEEEECSS--CEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred CCCEEEEEc-CC-------CeEEEEEeCCCC--ccccceeeeecCC--ceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 556555544 33 589999998521 1111111122211 225566666776 444 445677999999 88
Q ss_pred CeEEEee
Q 048458 362 QEVVQCE 368 (386)
Q Consensus 362 ~~~~~v~ 368 (386)
++...+.
T Consensus 90 ~~~~~~~ 96 (342)
T 1yfq_A 90 PSFQALT 96 (342)
T ss_dssp SSEEECB
T ss_pred CceEecc
Confidence 8876654
No 234
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=24.26 E-value=5.1e+02 Score=25.32 Aligned_cols=193 Identities=11% Similarity=0.074 Sum_probs=0.0
Q ss_pred cEEEEcccc-ccceecCCCCCCchhhhhhccccccccchhhhccCcceeeeEeeeeeecCCCCeEEEEEEEeeecccccc
Q 048458 113 PMFVWNPST-RKYKKIPSHKSFDWEKEQYRSSATASFIWEKEMKGSFATFAITGFGYDHRTSDFKILLIVHAREVASEQF 191 (386)
Q Consensus 113 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 191 (386)
.++++|..| ++...+...... ..... .+.+ |..+..-+.....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~-------------------------~~~~~-~~~~-pDg~~l~~~~~~~--------- 307 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ-------------------------DIYLA-RVNW-RDPQHLSFQRQSR--------- 307 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS-------------------------SEEEE-EEEE-EETTEEEEEEEET---------
T ss_pred EEEEEECCCCCceEEecCCCCc-------------------------ceEEE-EEEe-CCCCEEEEEEecc---------
Q ss_pred ccccceEEEEEcCCCceeecCCCCCCccc-cCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCC
Q 048458 192 RREFSDIQVYSLKNNCWRRIQPNVPCIPC-LSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLY 270 (386)
Q Consensus 192 ~~~~~~~~vyss~~~~W~~~~~~~p~~~~-~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~ 270 (386)
......+.+++..++..+.+-........ ........-||.+++.+.. .....|..+|..++ ...+.-....
T Consensus 308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-----~g~~~l~~~~~~~~-~~~l~~~~~~- 380 (741)
T 2ecf_A 308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER-----TGFQHLYRIDSKGK-AAALTHGNWS- 380 (741)
T ss_dssp TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT-----TSSCEEEEECSSSC-EEESCCSSSC-
T ss_pred cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC-----CCccEEEEEcCCCC-eeeeeecceE-
Q ss_pred CCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCC--EEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEE
Q 048458 271 NTDHIHRERSIGILEKSIALFVSCHTEDNTAGLG--ICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLR 348 (386)
Q Consensus 271 ~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~--~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~ 348 (386)
-....-..-+|+..++....+ . ++.||.++-.+ ....++...... ..+.++++|+.++.
T Consensus 381 -----v~~~~~~s~dg~~l~~~~~~~-------~~~~~~l~~~~~~g-----~~~~~l~~~~~~--~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 381 -----VDELLAVDEKAGLAYFRAGIE-------SARESQIYAVPLQG-----GQPQRLSKAPGM--HSASFARNASVYVD 441 (741)
T ss_dssp -----EEEEEEEETTTTEEEEEECSS-------CTTCBEEEEEETTC-----CCCEECCCSCSE--EEEEECTTSSEEEE
T ss_pred -----EEeEeEEeCCCCEEEEEEeCC-------CCceEEEEEEEcCC-----CCeeecccCCCc--eEEEECCCCCEEEE
Q ss_pred ecCC-----eEEEEECCCCeEEEe
Q 048458 349 NDDG-----ELVLYDHKTQEVVQC 367 (386)
Q Consensus 349 ~~~~-----~l~~ydl~~~~~~~v 367 (386)
...+ .++.+|.++++.+.+
T Consensus 442 ~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 442 SWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp EEEETTEEEEEEEEETTSCEEECS
T ss_pred EecCCCCCCeEEEEEcCCCeEEEe
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=24.23 E-value=4.6e+02 Score=24.81 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=56.4
Q ss_pred eEEEEEECCCce-eeeecCCCCCCCCCCccceeEEE-EeCCeEEEEEee-----CCCCCCCCCCEEEEEEEeecCCCcce
Q 048458 248 DIIVSFDFGDET-FRYRKLPDCLYNTDHIHRERSIG-ILEKSIALFVSC-----HTEDNTAGLGICSVYVMKENIEVEHW 320 (386)
Q Consensus 248 ~~il~fD~~~~~-~~~i~~P~~~~~~~~~~~~~~L~-~~~G~L~lv~~~-----~~~~~~~~~~~i~iW~l~~~~~~~~W 320 (386)
..|.++|+.+.+ -+.++++..... ..+..++ .-+|+.+++... .. +++.+|..++ +.|
T Consensus 228 d~V~v~D~~~~k~~~tI~vg~~g~~----P~~i~f~~~Pdg~~aYV~~e~~~~~Ls-------s~V~v~~~d~----g~~ 292 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHSLTLGEENRM----ALELRPLHDPTKLMGFINMVVSLKDLS-------SSIWLWFYED----GKW 292 (462)
T ss_dssp CEEEEEETTTTEEEEEEESCTTEEE----EEEEEECSSTTCCEEEEEEEEETTTCC-------EEEEEEEEET----TEE
T ss_pred CEEEEEECCCCcEeeEEecCCCCCc----cceeEeeECCCCCEEEEEEeeeccCCC-------ceEEEEEecC----Cce
Confidence 789999998754 344566422100 1222222 225666666554 33 5777776663 569
Q ss_pred EEEEEeecCCC----------c------ee-EEEEEecCCe-EEEEec-CCeEEEEECC
Q 048458 321 INLFTVDLRAQ----------F------AW-QYLGFGANDE-VMLRND-DGELVLYDHK 360 (386)
Q Consensus 321 ~~~~~i~~~~~----------~------~~-~~~~~~~~g~-i~l~~~-~~~l~~ydl~ 360 (386)
..+..|+.... . .. .-+.++.||+ +|+.+. .+.+..||..
T Consensus 293 ~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 293 NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 88887754331 0 11 3355777886 666654 4569999975
No 236
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=23.36 E-value=3.7e+02 Score=23.45 Aligned_cols=139 Identities=11% Similarity=0.088 Sum_probs=0.0
Q ss_pred EEEcCC--CceeecCCCCCCccccCCCceEEECCeEEEEEEeecCCCCCceEEEEEECCCceeeeecCCCCCCCCCCccc
Q 048458 200 VYSLKN--NCWRRIQPNVPCIPCLSSNSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRKLPDCLYNTDHIHR 277 (386)
Q Consensus 200 vyss~~--~~W~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~~~ 277 (386)
+|.+.+ .+|+.+. ...........-.+.-+|.+|..+.. +.|+.-+=..++|+.+..|... ..
T Consensus 101 i~~S~DgG~tW~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~~~~------~~ 165 (327)
T 2xbg_A 101 MLHTTDGGQSWSQIP-LDPKLPGSPRLIKALGNGSAEMITNV--------GAIYRTKDSGKNWQALVQEAIG------VM 165 (327)
T ss_dssp EEEESSTTSSCEECC-CCTTCSSCEEEEEEEETTEEEEEETT--------CCEEEESSTTSSEEEEECSCCC------CE
T ss_pred EEEECCCCCCceECc-cccCCCCCeEEEEEECCCCEEEEeCC--------ccEEEEcCCCCCCEEeecCCCc------ce
Q ss_pred eeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCeEEEE
Q 048458 278 ERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLY 357 (386)
Q Consensus 278 ~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~y 357 (386)
......-+|++.++..... +++..+.+. ..|+.+ .......+.-+++.+++.+++....+.++..
T Consensus 166 ~~~~~~~~~~~~~~g~~G~-----------~~~S~d~gG-~tW~~~---~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 166 RNLNRSPSGEYVAVSSRGS-----------FYSTWEPGQ-TAWEPH---NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp EEEEECTTSCEEEEETTSS-----------EEEEECTTC-SSCEEE---ECCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred EEEEEcCCCcEEEEECCCc-----------EEEEeCCCC-CceeEC---CCCCCCccceeEECCCCCEEEEeCCceEEEe
Q ss_pred ECC-CCeEEEee
Q 048458 358 DHK-TQEVVQCE 368 (386)
Q Consensus 358 dl~-~~~~~~v~ 368 (386)
+.+ .++|+.+.
T Consensus 231 ~~D~G~tW~~~~ 242 (327)
T 2xbg_A 231 DPDNSENWGELL 242 (327)
T ss_dssp ETTEEEEECCCB
T ss_pred cCCCCCeeEecc
No 237
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=23.31 E-value=3.1e+02 Score=25.81 Aligned_cols=62 Identities=11% Similarity=0.149 Sum_probs=45.9
Q ss_pred EECCeEEEEEEeecCCCCCc-eEEEEEECCCceeeeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCC
Q 048458 228 HLNGAVHWMAIRKESDGTNK-DIIVSFDFGDETFRYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHT 296 (386)
Q Consensus 228 ~~~G~lywl~~~~~~~~~~~-~~il~fD~~~~~~~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~ 296 (386)
|.+|+||..+.. ..++.. ..+..-+...+.|..+.+|..+. ...+-.+..++.|.|+.....
T Consensus 346 yYdgvLyLtTRg--t~~~~~GS~L~rs~d~Gq~w~slrfp~nvH-----htnlPFakvgD~l~mFgsERA 408 (670)
T 3ju4_A 346 YYDGVLYLITRG--TRGDRLGSSLHRSRDIGQTWESLRFPHNVH-----HTTLPFAKVGDDLIMFGSERA 408 (670)
T ss_dssp EETTEEEEEEEE--SCTTSCCCEEEEESSTTSSCEEEECTTCCC-----SSCCCEEEETTEEEEEEECSS
T ss_pred hhCCEEEEEecC--cCCCCCcceeeeecccCCchhheecccccc-----ccCCCcceeCCEEEEEecccc
Confidence 789999999876 222222 35666667788999999997664 466677888999999987543
No 238
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=23.28 E-value=5.4e+02 Score=25.30 Aligned_cols=32 Identities=6% Similarity=0.068 Sum_probs=22.6
Q ss_pred CceEEECCeEEEEEEeecCCCCCceEEEEEECCCc--eeeee
Q 048458 224 NSTVHLNGAVHWMAIRKESDGTNKDIIVSFDFGDE--TFRYR 263 (386)
Q Consensus 224 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~~--~~~~i 263 (386)
..+++.+|.+|.-+.+ +.|.++|..+. .|+.-
T Consensus 111 ~~~~~~~~~v~v~~~d--------g~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 111 RGVALWGDKVYVGTLD--------GRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp CCCEEEBTEEEEECTT--------SEEEEEETTTCCEEEEEE
T ss_pred cceEEECCEEEEEcCC--------CEEEEEECCCCCEeeeec
Confidence 3456788999876544 78999998654 56653
No 239
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=22.79 E-value=3.5e+02 Score=22.84 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=51.5
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCCCccceeEEEE-eCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIGI-LEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~~-~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|+.+.+. ..++.+.... .-..+.. -+|+..++..... ..+.+|-++. .+ .+.+
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~----~~--~~~~ 71 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGP------TPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVT----GE--TLGR 71 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTT------CCCCEEECTTSSEEEEEETTT-------TEEEEEETTT----CC--EEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCC------CccceEEcCCCCEEEEEeCCC-------CeEEEEECCC----CC--eEee
Confidence 6899999987654 3445554210 0111222 2565444444333 4777776543 11 2223
Q ss_pred eecCCCc----eeEEEEEecCCe-EEEEe------------cCCeEEEEECCCCeEE
Q 048458 326 VDLRAQF----AWQYLGFGANDE-VMLRN------------DDGELVLYDHKTQEVV 365 (386)
Q Consensus 326 i~~~~~~----~~~~~~~~~~g~-i~l~~------------~~~~l~~ydl~~~~~~ 365 (386)
+...... ....++++++|+ +++.. .+..+..||+++++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 3322100 003456777774 55543 3467999999998764
No 240
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=21.76 E-value=3.9e+02 Score=23.04 Aligned_cols=54 Identities=15% Similarity=0.292 Sum_probs=29.4
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCc-eeEEEEEec--CCeEEEE-ecCCeEEEEECCC
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQF-AWQYLGFGA--NDEVMLR-NDDGELVLYDHKT 361 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~-~~~~~~~~~--~g~i~l~-~~~~~l~~ydl~~ 361 (386)
..+.||.... ..|............ ....+++.+ ++.++.. ..++.+..||+++
T Consensus 271 g~v~iw~~~~----~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 271 GVLAVYEEVD----GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp SCEEEEEEET----TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CEEEEEEcCC----CceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 5899998873 457665443221111 224556655 4555544 4567799999875
No 241
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.65 E-value=5.8e+02 Score=25.00 Aligned_cols=116 Identities=8% Similarity=-0.067 Sum_probs=62.1
Q ss_pred ECCeEEEEEEeecCCCCCceEEEEEECCCcee--------eeecCCCCCCCCCCccceeEEEEeCCeEEEEEeeCCCCCC
Q 048458 229 LNGAVHWMAIRKESDGTNKDIIVSFDFGDETF--------RYRKLPDCLYNTDHIHRERSIGILEKSIALFVSCHTEDNT 300 (386)
Q Consensus 229 ~~G~lywl~~~~~~~~~~~~~il~fD~~~~~~--------~~i~~P~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~ 300 (386)
-||.+-..+.. + +.|..+|+.++.. ..++ ....++. ..-..++-..+. ++....+
T Consensus 139 PDG~~LAsgs~-D------GtVkIWd~~~~~l~~~~~i~l~ti~--~~~~gh~--~~V~sVawSPdg--Laass~D---- 201 (588)
T 2j04_A 139 PIESSIVVGNE-D------GELQFFSIRKNSENTPEFYFESSIR--LSDAGSK--DWVTHIVWYEDV--LVAALSN---- 201 (588)
T ss_dssp SSSSCEEEEET-T------SEEEEEECCCCTTTCCCCEEEEEEE--CSCTTCC--CCEEEEEEETTE--EEEEETT----
T ss_pred CCCCEEEEEcC-C------CEEEEEECCCCccccccceeeeeee--ccccccc--ccEEEEEEcCCc--EEEEeCC----
Confidence 47777666665 3 7899999998742 2222 1111111 234455555444 4444445
Q ss_pred CCCCEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCCeEEEEecCCeEEEEECCCCeEEEeee
Q 048458 301 AGLGICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGANDEVMLRNDDGELVLYDHKTQEVVQCES 369 (386)
Q Consensus 301 ~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g~i~l~~~~~~l~~ydl~~~~~~~v~~ 369 (386)
..+.+|.+++......|. ++.........-+++. |..+....++.+..||+++++......
T Consensus 202 ---~tVrlWd~~~~~~~~~~~---tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~ 262 (588)
T 2j04_A 202 ---NSVFSMTVSASSHQPVSR---MIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKT 262 (588)
T ss_dssp ---CCEEEECCCSSSSCCCEE---EEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEEC
T ss_pred ---CeEEEEECCCCcccccee---eecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEc
Confidence 699999988532111232 2311111111223333 344554445779999999999866554
No 242
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=21.26 E-value=4e+02 Score=24.15 Aligned_cols=133 Identities=9% Similarity=0.039 Sum_probs=63.1
Q ss_pred EEEEEcC---CCceeecCCCCCCccccCCCceEEE-CCeEEEEEEeecCCCCCceEEEEEECCCceeeeec----CCCCC
Q 048458 198 IQVYSLK---NNCWRRIQPNVPCIPCLSSNSTVHL-NGAVHWMAIRKESDGTNKDIIVSFDFGDETFRYRK----LPDCL 269 (386)
Q Consensus 198 ~~vyss~---~~~W~~~~~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~~~~~~i~----~P~~~ 269 (386)
.-+|+.. ..+|+... .++.. .....|-+ +|.|+.+... ..+. .+....+-| ++|+... +|...
T Consensus 205 ~~~~S~D~~~G~tW~~~~-~~~~~---~e~~vve~~dG~L~~~~r~-~~g~-~r~v~~S~D---~tWt~~~~~~~l~~~~ 275 (386)
T 2xzi_A 205 RNIIGRGAPGNRTWSVQR-LSGAG---AEGTIVQTPDGKLYRNDRP-SQKG-YRMVARGTL---EGFGAFAPDAGLPDPA 275 (386)
T ss_dssp EEEEEESSTTSCEEEEEE-CTTCC---SSEEEEECTTSCEEEEECC-SSSE-EEEEEEEET---TEECCCEEEEEEEECS
T ss_pred EEEEccCCCCCCcccccC-cCCCC---CcCEEEEeCCCcEEEEEeC-CCCc-cEEEEEEeC---CccCcccccCCCCCCC
Confidence 4556665 47998765 33321 11123333 7899887765 3211 123344455 8887653 22211
Q ss_pred CCCCCccceeEEEEeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEEeecCC-C-----ceeEEEEEecCC
Q 048458 270 YNTDHIHRERSIGILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFTVDLRA-Q-----FAWQYLGFGAND 343 (386)
Q Consensus 270 ~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~i~~~~-~-----~~~~~~~~~~~g 343 (386)
.. .....+...++.+.++...... .....+.+|+-.+. ....|.....+.... . ..|.-+....+|
T Consensus 276 ~~----~~~i~~~~~~~~~ll~~~p~~~---~~R~~l~l~~S~D~-~G~tW~~~~~~~~g~~~~~~~~~~ys~l~~~~dg 347 (386)
T 2xzi_A 276 CQ----GSVLRYNSDAPARTIFLNSASG---TSRRAMRVRISYDA-DAKKFNYGRKLEDAKVSGAGHEGGYSSMTKTGDY 347 (386)
T ss_dssp CC----CEEEEEESSSSCEEEEEEECSS---SCSCCEEEEEECST-TCCCCCCCEEGGGGCCSSSCEEEEEEEEEECTTS
T ss_pred Cc----cEEEEecCCCCCEEEEECCCCC---CCCcceEEEEEcCC-CCCccCCceEEecCCccccCCceEeceeEECCCC
Confidence 00 1122222123444444432210 11246888886653 137899877765433 1 233445455556
Q ss_pred eEEE
Q 048458 344 EVML 347 (386)
Q Consensus 344 ~i~l 347 (386)
.|++
T Consensus 348 ~l~~ 351 (386)
T 2xzi_A 348 KIGA 351 (386)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 5443
No 243
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=21.12 E-value=4.5e+02 Score=23.53 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=28.7
Q ss_pred CEEEEEEEeecCCCcceEEEEEeecCCCceeEEEEEecCC-eEEEEe--cCCeEEEEECCCCeE
Q 048458 304 GICSVYVMKENIEVEHWINLFTVDLRAQFAWQYLGFGAND-EVMLRN--DDGELVLYDHKTQEV 364 (386)
Q Consensus 304 ~~i~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~g-~i~l~~--~~~~l~~ydl~~~~~ 364 (386)
.++.||-+.. ......+...... .-+....++ .++... .++.+.+||+.+++.
T Consensus 301 ~~I~iwd~~t------~~~~~~~~~~~~v--~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 301 RHIRIWNVCS------GACLSAVDAHSQV--CSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp CEEEEEETTT------TEEEEEEECSSCE--EEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred CEEEEEeCCc------cccceeeccccce--eeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence 6899997763 1233333332211 333444444 455444 245688888887664
No 244
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=20.96 E-value=5.8e+02 Score=24.80 Aligned_cols=26 Identities=15% Similarity=0.354 Sum_probs=17.7
Q ss_pred EEEEEecCCeEEEE-ecCCeEEEEECC
Q 048458 335 QYLGFGANDEVMLR-NDDGELVLYDHK 360 (386)
Q Consensus 335 ~~~~~~~~g~i~l~-~~~~~l~~ydl~ 360 (386)
.-++++++|..++. ..++.+.+||+.
T Consensus 666 ~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 666 TSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 44667788876654 456779999875
No 245
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=20.56 E-value=3.9e+02 Score=22.65 Aligned_cols=32 Identities=13% Similarity=0.038 Sum_probs=21.1
Q ss_pred EEEec-CCeEEEEecCCeEEEEECCCCeE-EEeee
Q 048458 337 LGFGA-NDEVMLRNDDGELVLYDHKTQEV-VQCES 369 (386)
Q Consensus 337 ~~~~~-~g~i~l~~~~~~l~~ydl~~~~~-~~v~~ 369 (386)
+++++ +|..++.. ++.+..||+++++. +.+..
T Consensus 260 ~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~ 293 (349)
T 1jmx_B 260 GLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANL 293 (349)
T ss_dssp EEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEEC
T ss_pred eEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcC
Confidence 44556 77544444 56799999999886 34443
No 246
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=20.41 E-value=4.3e+02 Score=23.08 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=52.1
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCCCccceeEEE-EeCCeEEEEEeeCCCCCCCCCCEEEEEEEeecCCCcceEEEEE
Q 048458 248 DIIVSFDFGDETF-RYRKLPDCLYNTDHIHRERSIG-ILEKSIALFVSCHTEDNTAGLGICSVYVMKENIEVEHWINLFT 325 (386)
Q Consensus 248 ~~il~fD~~~~~~-~~i~~P~~~~~~~~~~~~~~L~-~~~G~L~lv~~~~~~~~~~~~~~i~iW~l~~~~~~~~W~~~~~ 325 (386)
+.|..+|..+... ..+..|... ...+. .-+|.+.+.... + ..+.+|.+........-.....
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~--------v~~~~~sp~g~~lasg~~-d-------~~i~v~~~~~~~~~~~~~~~~~ 149 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTW--------VMACAYAPSGCAIACGGL-D-------NKCSVYPLTFDKNENMAAKKKS 149 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSC--------CCEEEECTTSSEEEEEST-T-------SEEEEEECCCCTTCCSGGGCEE
T ss_pred CeEEEEECCCCCcceEEecCCCC--------EEEEEECCCCCEEEEeeC-C-------CCEEEEEEecccccccccccee
Confidence 6888999876543 333444321 11222 225665554443 3 5899998864211111111222
Q ss_pred eecCCCceeEEEEEecCCe-EEEEecCCeEEEEECCCCeEE
Q 048458 326 VDLRAQFAWQYLGFGANDE-VMLRNDDGELVLYDHKTQEVV 365 (386)
Q Consensus 326 i~~~~~~~~~~~~~~~~g~-i~l~~~~~~l~~ydl~~~~~~ 365 (386)
+.... .....+.+.+++. ++-...++.+..||+++++..
T Consensus 150 ~~~h~-~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 150 VAMHT-NYLSACSFTNSDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp EEECS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred eeccC-CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 22111 1114455566664 444555677999999888753
No 247
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=20.09 E-value=6e+02 Score=24.62 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=22.3
Q ss_pred EEEEEecCCeEEEEe--c---CCeEEEEECCCCeEEEe
Q 048458 335 QYLGFGANDEVMLRN--D---DGELVLYDHKTQEVVQC 367 (386)
Q Consensus 335 ~~~~~~~~g~i~l~~--~---~~~l~~ydl~~~~~~~v 367 (386)
..+++.+||++++.. + ...++.+|+++++...+
T Consensus 258 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 258 TMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 456777888755432 2 13599999999887654
Done!