Query 048461
Match_columns 362
No_of_seqs 223 out of 1893
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 09:44:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048461.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048461hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03176 AllC allantoate amid 100.0 2.7E-50 5.9E-55 404.0 31.3 274 67-357 3-305 (406)
2 PRK13799 unknown domain/N-carb 100.0 3.7E-48 8.1E-53 404.8 29.9 277 67-357 181-490 (591)
3 PRK13590 putative bifunctional 100.0 3.2E-46 6.9E-51 390.3 30.8 276 66-357 180-488 (591)
4 PRK12891 allantoate amidohydro 100.0 9.7E-45 2.1E-49 364.4 31.5 273 64-357 7-311 (414)
5 TIGR01879 hydantase amidase, h 100.0 7.3E-44 1.6E-48 356.5 31.9 272 67-357 1-304 (401)
6 PRK12892 allantoate amidohydro 100.0 7.9E-42 1.7E-46 342.2 32.1 275 62-357 5-312 (412)
7 PRK12893 allantoate amidohydro 100.0 1E-39 2.2E-44 327.1 31.5 276 61-357 4-311 (412)
8 PRK12890 allantoate amidohydro 100.0 7.2E-39 1.6E-43 321.5 32.0 276 64-357 6-313 (414)
9 PRK09290 allantoate amidohydro 100.0 5E-38 1.1E-42 315.4 32.2 279 62-357 2-312 (413)
10 PRK07473 carboxypeptidase; Pro 100.0 1.7E-30 3.6E-35 258.3 25.7 233 59-337 3-260 (376)
11 PRK06915 acetylornithine deace 100.0 6.7E-29 1.5E-33 249.6 27.9 241 64-357 14-311 (422)
12 PRK06837 acetylornithine deace 100.0 2.6E-28 5.6E-33 246.2 26.5 242 63-356 16-315 (427)
13 PRK07338 hypothetical protein; 100.0 8.1E-29 1.8E-33 247.4 22.2 246 63-356 13-296 (402)
14 PRK06133 glutamate carboxypept 100.0 3.3E-28 7.3E-33 244.3 26.7 245 63-355 33-302 (410)
15 PRK00466 acetyl-lysine deacety 100.0 2.9E-28 6.3E-33 239.1 25.0 226 67-355 10-249 (346)
16 PRK13013 succinyl-diaminopimel 100.0 6.2E-28 1.3E-32 242.7 27.8 249 64-357 11-318 (427)
17 PRK08588 succinyl-diaminopimel 100.0 9.2E-28 2E-32 237.7 28.0 238 67-357 2-273 (377)
18 TIGR01883 PepT-like peptidase 100.0 1.6E-28 3.6E-33 241.5 20.7 237 68-356 1-264 (361)
19 TIGR03320 ygeY M20/DapE family 100.0 1.2E-27 2.6E-32 238.8 26.9 236 65-354 11-278 (395)
20 PRK08737 acetylornithine deace 100.0 1.5E-27 3.3E-32 236.3 26.5 232 65-355 4-267 (364)
21 PRK07522 acetylornithine deace 100.0 1.2E-27 2.6E-32 237.2 25.0 241 67-355 4-280 (385)
22 TIGR01910 DapE-ArgE acetylorni 100.0 2.6E-27 5.6E-32 234.5 26.6 240 71-357 2-282 (375)
23 TIGR03526 selenium_YgeY putati 100.0 3.1E-27 6.8E-32 235.8 27.1 236 65-354 11-278 (395)
24 PRK13004 peptidase; Reviewed 100.0 3.5E-27 7.5E-32 235.8 26.4 237 63-353 11-279 (399)
25 PRK05111 acetylornithine deace 100.0 2.8E-27 6.1E-32 234.6 25.5 245 66-357 4-285 (383)
26 PLN02693 IAA-amino acid hydrol 100.0 6.3E-27 1.4E-31 237.1 28.1 241 66-357 46-311 (437)
27 TIGR01892 AcOrn-deacetyl acety 100.0 5E-27 1.1E-31 230.7 26.2 236 71-357 1-272 (364)
28 PRK13009 succinyl-diaminopimel 100.0 7.7E-27 1.7E-31 230.6 26.5 239 67-354 2-276 (375)
29 TIGR01893 aa-his-dipept aminoa 100.0 2.3E-27 5E-32 242.7 22.7 237 66-357 3-282 (477)
30 PLN02280 IAA-amino acid hydrol 100.0 1.7E-26 3.7E-31 236.1 27.3 252 65-357 91-363 (478)
31 PRK08652 acetylornithine deace 100.0 6.7E-27 1.5E-31 228.4 22.9 233 67-354 2-248 (347)
32 PRK04443 acetyl-lysine deacety 100.0 1.5E-26 3.3E-31 227.3 25.3 231 63-353 2-252 (348)
33 PRK09133 hypothetical protein; 100.0 1.4E-26 3E-31 236.5 25.8 250 63-354 33-365 (472)
34 TIGR01246 dapE_proteo succinyl 100.0 2.2E-26 4.8E-31 227.3 25.8 237 70-355 2-274 (370)
35 PRK13007 succinyl-diaminopimel 100.0 4E-26 8.6E-31 223.7 26.1 235 66-355 6-265 (352)
36 TIGR01891 amidohydrolases amid 100.0 3.2E-26 7E-31 226.0 25.5 244 70-357 2-267 (363)
37 PRK13381 peptidase T; Provisio 99.9 2.7E-26 5.8E-31 229.8 24.3 244 68-357 2-301 (404)
38 PRK13983 diaminopimelate amino 99.9 4.9E-26 1.1E-30 226.4 25.0 249 66-356 4-299 (400)
39 TIGR01880 Ac-peptdase-euk N-ac 99.9 4.5E-26 9.8E-31 227.6 24.8 247 65-355 7-295 (400)
40 TIGR01900 dapE-gram_pos succin 99.9 5.5E-26 1.2E-30 225.6 23.7 229 72-352 1-276 (373)
41 PRK08651 succinyl-diaminopimel 99.9 5.5E-26 1.2E-30 226.1 23.7 242 65-357 4-290 (394)
42 PRK07907 hypothetical protein; 99.9 1.3E-25 2.8E-30 228.0 25.1 250 64-355 15-341 (449)
43 PRK08596 acetylornithine deace 99.9 2.7E-25 5.7E-30 223.9 27.2 243 65-356 11-301 (421)
44 COG0624 ArgE Acetylornithine d 99.9 9.7E-26 2.1E-30 225.9 23.0 252 64-356 10-305 (409)
45 PRK08262 hypothetical protein; 99.9 2.1E-25 4.6E-30 228.5 25.5 260 59-355 36-379 (486)
46 PRK07906 hypothetical protein; 99.9 1.3E-25 2.7E-30 226.3 22.8 246 70-352 2-320 (426)
47 TIGR01882 peptidase-T peptidas 99.9 5.6E-26 1.2E-30 228.3 19.8 247 67-358 3-306 (410)
48 PRK08201 hypothetical protein; 99.9 1.8E-25 3.9E-30 227.2 23.6 252 63-355 10-349 (456)
49 PRK06446 hypothetical protein; 99.9 1.2E-25 2.7E-30 227.4 21.5 246 67-355 2-330 (436)
50 PRK05469 peptidase T; Provisio 99.9 7.6E-25 1.6E-29 219.6 24.0 244 67-357 2-303 (408)
51 PRK15026 aminoacyl-histidine d 99.9 1E-24 2.2E-29 223.6 23.2 217 64-337 7-273 (485)
52 PRK09104 hypothetical protein; 99.9 3.8E-24 8.2E-29 218.1 25.4 255 63-355 13-357 (464)
53 TIGR01902 dapE-lys-deAc N-acet 99.9 1.4E-24 3.1E-29 212.0 21.2 221 72-351 2-236 (336)
54 PRK07079 hypothetical protein; 99.9 2.1E-23 4.5E-28 213.0 22.6 253 64-355 14-352 (469)
55 PRK07205 hypothetical protein; 99.9 3.6E-22 7.7E-27 202.5 25.5 252 65-354 9-345 (444)
56 COG1473 AbgB Metal-dependent a 99.9 1.1E-21 2.4E-26 195.2 26.8 250 65-359 10-283 (392)
57 PRK07318 dipeptidase PepV; Rev 99.9 8.6E-22 1.9E-26 201.0 26.1 265 64-354 11-368 (466)
58 TIGR01886 dipeptidase dipeptid 99.9 3.6E-21 7.8E-26 196.6 27.3 264 65-354 11-368 (466)
59 PRK06156 hypothetical protein; 99.9 8.6E-21 1.9E-25 196.3 26.5 301 8-356 2-415 (520)
60 TIGR01887 dipeptidaselike dipe 99.9 2.2E-19 4.7E-24 182.7 28.8 255 67-350 2-351 (447)
61 KOG2275 Aminoacylase ACY1 and 99.8 3.8E-19 8.2E-24 174.1 22.9 244 66-349 24-306 (420)
62 PRK08554 peptidase; Reviewed 99.8 4E-17 8.7E-22 165.7 22.5 239 68-354 2-337 (438)
63 PF07687 M20_dimer: Peptidase 99.6 1.2E-14 2.7E-19 119.0 11.6 101 252-357 1-108 (111)
64 COG2195 PepD Di- and tripeptid 99.1 2.9E-10 6.2E-15 114.1 11.4 224 64-330 2-285 (414)
65 KOG2276 Metalloexopeptidases [ 99.0 2.5E-08 5.4E-13 98.1 18.0 262 59-354 8-362 (473)
66 COG1363 FrvX Cellulase M and r 99.0 4.6E-08 1E-12 96.4 19.3 69 67-154 2-70 (355)
67 COG4187 RocB Arginine degradat 99.0 8.7E-09 1.9E-13 102.1 13.8 194 64-295 5-262 (553)
68 PRK10199 alkaline phosphatase 99.0 3.6E-09 7.8E-14 103.9 10.7 80 89-178 47-161 (346)
69 TIGR03106 trio_M42_hydro hydro 98.8 2.2E-08 4.7E-13 98.9 9.1 72 65-155 1-72 (343)
70 PRK09961 exoaminopeptidase; Pr 98.6 1E-07 2.2E-12 94.3 8.2 65 71-155 4-68 (344)
71 TIGR03107 glu_aminopep glutamy 98.5 1.8E-07 3.9E-12 92.6 8.0 67 71-155 2-68 (350)
72 PRK09864 putative peptidase; P 98.4 1.2E-06 2.7E-11 86.8 8.5 65 70-155 3-67 (356)
73 PF01546 Peptidase_M20: Peptid 98.2 2.8E-05 6.2E-10 68.8 12.4 34 324-357 151-188 (189)
74 KOG2194 Aminopeptidases of the 97.2 0.0026 5.6E-08 68.7 11.5 101 63-177 53-180 (834)
75 KOG3946 Glutaminyl cyclase [Po 90.7 0.46 1E-05 45.6 5.3 94 64-176 48-157 (338)
76 PF04389 Peptidase_M28: Peptid 90.2 0.39 8.5E-06 42.2 4.3 35 143-177 2-43 (179)
77 PF05343 Peptidase_M42: M42 gl 87.2 0.55 1.2E-05 45.5 3.3 26 120-154 1-26 (292)
78 KOG2195 Transferrin receptor a 76.0 4.9 0.00011 43.6 5.7 51 117-176 336-386 (702)
79 TIGR03176 AllC allantoate amid 75.2 2.9 6.3E-05 42.2 3.6 31 331-361 374-404 (406)
80 COG0624 ArgE Acetylornithine d 74.5 3.1 6.6E-05 41.7 3.6 31 331-361 378-408 (409)
81 TIGR03107 glu_aminopep glutamy 74.2 35 0.00075 34.0 10.8 30 331-360 313-342 (350)
82 PRK13799 unknown domain/N-carb 71.9 3.9 8.4E-05 43.6 3.7 31 331-361 560-590 (591)
83 PRK13590 putative bifunctional 69.8 4.5 9.9E-05 43.0 3.7 31 331-361 558-588 (591)
84 TIGR01902 dapE-lys-deAc N-acet 68.4 4.6 0.0001 39.2 3.2 30 331-360 305-334 (336)
85 PRK07205 hypothetical protein; 67.6 5.5 0.00012 40.5 3.7 31 331-361 413-443 (444)
86 PRK13013 succinyl-diaminopimel 67.2 4.9 0.00011 40.4 3.2 31 331-361 393-423 (427)
87 PRK09133 hypothetical protein; 64.6 6.4 0.00014 40.4 3.5 31 331-361 440-470 (472)
88 COG2234 Iap Predicted aminopep 61.0 15 0.00033 37.0 5.4 39 141-179 208-247 (435)
89 TIGR01879 hydantase amidase, h 61.0 8.1 0.00018 38.7 3.4 29 331-359 373-401 (401)
90 PRK08652 acetylornithine deace 60.9 7.4 0.00016 37.7 3.0 30 331-360 316-345 (347)
91 PRK13381 peptidase T; Provisio 59.0 7.3 0.00016 39.0 2.6 30 332-361 375-404 (404)
92 PRK00466 acetyl-lysine deacety 58.7 9.4 0.0002 37.3 3.3 30 331-360 314-343 (346)
93 PRK12890 allantoate amidohydro 57.1 12 0.00026 37.6 3.8 31 332-362 383-413 (414)
94 PRK07338 hypothetical protein; 56.1 9.2 0.0002 38.1 2.8 31 331-361 369-399 (402)
95 TIGR01880 Ac-peptdase-euk N-ac 55.9 11 0.00023 37.6 3.3 30 332-361 370-399 (400)
96 PRK05111 acetylornithine deace 55.3 12 0.00027 36.8 3.6 30 331-360 352-381 (383)
97 PRK07318 dipeptidase PepV; Rev 53.0 13 0.00028 38.1 3.4 29 332-360 437-465 (466)
98 PRK07079 hypothetical protein; 52.9 16 0.00034 37.5 4.0 30 333-362 428-457 (469)
99 PRK12891 allantoate amidohydro 52.3 14 0.0003 37.2 3.4 31 331-361 380-410 (414)
100 PRK06915 acetylornithine deace 51.9 13 0.00028 37.4 3.1 30 331-360 389-418 (422)
101 TIGR01893 aa-his-dipept aminoa 51.9 33 0.00071 35.3 6.1 42 304-354 337-378 (477)
102 COG4882 Predicted aminopeptida 51.1 23 0.00049 35.6 4.5 39 141-180 189-227 (486)
103 PRK12892 allantoate amidohydro 48.8 19 0.00042 35.9 3.8 31 331-361 381-411 (412)
104 PRK13009 succinyl-diaminopimel 47.4 17 0.00037 35.6 3.2 30 331-360 345-374 (375)
105 TIGR01246 dapE_proteo succinyl 46.5 17 0.00036 35.8 2.9 29 331-359 342-370 (370)
106 PRK06446 hypothetical protein; 45.6 23 0.0005 35.9 3.8 31 331-361 405-435 (436)
107 PRK08201 hypothetical protein; 45.3 24 0.00053 35.9 4.0 30 332-361 426-455 (456)
108 PRK08651 succinyl-diaminopimel 44.9 21 0.00045 35.3 3.3 31 331-361 362-392 (394)
109 PRK04443 acetyl-lysine deacety 44.6 21 0.00046 34.9 3.3 29 331-359 320-348 (348)
110 PRK07522 acetylornithine deace 44.0 24 0.00053 34.7 3.6 30 331-360 355-384 (385)
111 PRK08262 hypothetical protein; 41.5 25 0.00054 36.2 3.4 31 331-361 455-485 (486)
112 PRK13007 succinyl-diaminopimel 40.0 22 0.00047 34.6 2.5 26 331-356 326-351 (352)
113 TIGR01882 peptidase-T peptidas 39.7 24 0.00052 35.5 2.8 30 333-362 380-409 (410)
114 TIGR01886 dipeptidase dipeptid 39.3 28 0.00062 35.7 3.4 30 331-360 436-465 (466)
115 PRK09290 allantoate amidohydro 39.1 33 0.00072 34.4 3.8 30 332-361 382-411 (413)
116 PRK07907 hypothetical protein; 38.9 33 0.00071 34.9 3.7 29 332-360 419-447 (449)
117 PRK05469 peptidase T; Provisio 38.7 26 0.00056 35.1 2.9 30 332-361 377-406 (408)
118 PRK06133 glutamate carboxypept 38.1 21 0.00046 35.9 2.2 29 333-361 380-408 (410)
119 PRK08588 succinyl-diaminopimel 37.4 30 0.00066 34.0 3.1 29 332-360 348-376 (377)
120 PRK06156 hypothetical protein; 37.3 35 0.00075 35.6 3.7 29 333-361 488-516 (520)
121 PRK13004 peptidase; Reviewed 36.9 31 0.00066 34.4 3.1 30 331-360 367-396 (399)
122 TIGR03320 ygeY M20/DapE family 36.3 31 0.00067 34.3 3.0 30 331-360 365-394 (395)
123 PRK12893 allantoate amidohydro 35.9 39 0.00084 33.8 3.7 30 331-360 380-409 (412)
124 PRK02813 putative aminopeptida 35.6 1.9E+02 0.0042 29.6 8.7 27 331-357 400-426 (428)
125 PRK13983 diaminopimelate amino 35.6 32 0.00069 34.0 2.9 28 331-358 372-399 (400)
126 TIGR03526 selenium_YgeY putati 35.5 32 0.00069 34.3 2.9 30 331-360 365-394 (395)
127 PRK09104 hypothetical protein; 34.0 44 0.00095 34.1 3.8 30 331-360 433-462 (464)
128 PRK07906 hypothetical protein; 32.8 39 0.00086 33.9 3.1 28 331-358 398-425 (426)
129 PTZ00371 aspartyl aminopeptida 31.2 1.3E+02 0.0029 31.1 6.7 27 332-358 428-454 (465)
130 PRK08596 acetylornithine deace 31.0 42 0.00091 33.8 3.0 29 332-360 388-416 (421)
131 PRK06837 acetylornithine deace 30.6 43 0.00094 33.7 3.0 29 332-360 394-422 (427)
132 TIGR01883 PepT-like peptidase 28.5 35 0.00076 33.3 1.9 25 332-356 336-360 (361)
133 COG4943 Predicted signal trans 25.1 62 0.0013 33.7 2.9 85 34-120 335-423 (524)
134 TIGR01892 AcOrn-deacetyl acety 24.2 51 0.0011 32.0 2.2 25 331-355 339-363 (364)
135 PRK08554 peptidase; Reviewed 23.7 67 0.0014 32.8 2.9 29 332-360 409-437 (438)
136 PRK08737 acetylornithine deace 22.0 70 0.0015 31.7 2.6 27 331-357 336-362 (364)
137 PF03738 GSP_synth: Glutathion 21.2 1.7E+02 0.0037 23.1 4.3 31 93-123 10-40 (97)
No 1
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=2.7e-50 Score=404.03 Aligned_cols=274 Identities=34% Similarity=0.503 Sum_probs=238.7
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
.|+++.|++|.+|++.+.+|++|++||.+|+++++||++||+++|++|++|.+||+|+ +++|..++.|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~~gN~~~--------~~~g~~~~~~~i~~ 74 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDDVGNLYG--------RLVGTEFPEETILT 74 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEE--------EecCCCCCCCeEEE
Confidence 6899999999999877778999999999999999999999999999999999999999 99998766799999
Q ss_pred EecccCCCCCCccccHHHHHHHHHHHHHhh-----------------------------hcccccccchhhhhcccccCC
Q 048461 147 GSHIDAIPYSGKYDGVTGVLGALEAINVLK-----------------------------SRLLAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 147 ~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~-----------------------------s~~~~g~~~~~e~l~~~~D~~ 197 (362)
+|||||||+||+|||++||+++|++++.|+ |+.+.|.+.. +.+....|.+
T Consensus 75 gsHlDtv~~gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~-~~~~~~~d~~ 153 (406)
T TIGR03176 75 GSHIDTVVNGGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKP-EDVRTIEDAK 153 (406)
T ss_pred eccccCCCCCCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCH-HHHHhCcCCC
Confidence 999999999999999999999999999998 2234444432 2234457888
Q ss_pred cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 198 NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 198 G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
|+++.+++++.|+.++. +... ..++++|+|+|||||++||.++.++|+|++++|..||+|+|+|+++|+|++||.
T Consensus 154 g~~~~~~~~~~g~~~~~--~~~~---~~~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaHag~~p~~ 228 (406)
T TIGR03176 154 GIKFVDAMHACGFDLRK--APTV---RDDIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANHAGTTPMS 228 (406)
T ss_pred CCCHHHHHHHcCCCccc--cccc---ccccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCCCCCCCcc
Confidence 99999999999997542 2222 137899999999999999999999999999999999999999999999988986
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 278 NRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+|+||+.+|++++.+++++..+.. +.+++|||+|+++|+++|+||++|++++|+|+.|.| ..+++.+.++..++.+.
T Consensus 229 ~r~dAi~aaa~~i~~l~~~~~~~~-~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~--~~e~v~~~i~~~i~~ia 305 (406)
T TIGR03176 229 YRRDTVYAFSRICTQSIERAKEIG-DPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAA--VLRNFTKELENDMKAIA 305 (406)
T ss_pred cccCHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHH--HHHHHHHHHHHHHHHHH
Confidence 679999999999999998765432 457899999997678999999999999999999998 77777777777766554
No 2
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=3.7e-48 Score=404.76 Aligned_cols=277 Identities=29% Similarity=0.442 Sum_probs=232.7
Q ss_pred HHHHHHHHHHHcCCC---CCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCCCCCc
Q 048461 67 ETLQKQIDELSTFSD---TPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s---~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
+|+++.|++|.+|+. .+.+|++|++||.++.++++||.+||+++|++ |++|++|||+| +++|.++++|
T Consensus 181 ~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~gNv~~--------~~~g~~~~~p 252 (591)
T PRK13799 181 ADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDAVGNVVG--------RYKAADDDAK 252 (591)
T ss_pred HHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECCCCCEEE--------EcCCCCCCCC
Confidence 689999999999974 34579999999999999999999999999998 99999999999 9988766679
Q ss_pred eEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhc-----------------------------ccccccchhhhhccc
Q 048461 143 SVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSR-----------------------------LLAGIESLAKDLTSI 193 (362)
Q Consensus 143 ~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~-----------------------------~~~g~~~~~e~l~~~ 193 (362)
+|+++||+||||.||+|||.+||+++|++++.|+.. .+.|.+. .+ ....
T Consensus 253 ~v~~gSHlDTV~~gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~-~~-~~~~ 330 (591)
T PRK13799 253 TLITGSHYDTVRNGGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFN-ME-LLDI 330 (591)
T ss_pred eEEEeccccccCCCCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCCh-HH-HHhc
Confidence 999999999999999999999999999999999822 1223221 11 1234
Q ss_pred ccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCc
Q 048461 194 VDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGA 273 (362)
Q Consensus 194 ~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~ 273 (362)
.|.+|+++.++++..|+.+. .+.+...++.++++|+|+||||||+||.++.++|+|++++|..||+|+|+|+++|+|+
T Consensus 331 ~d~~G~~~~~~l~~~g~~~~--~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~GkaaHag~ 408 (591)
T PRK13799 331 KDADGISLREAIQHAGHCID--AIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMASHAGT 408 (591)
T ss_pred cCCCCCCHHHHHHHcCCChh--hccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECCCCCC
Confidence 56678889999999988543 1222222234789999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHH
Q 048461 274 VLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLA 353 (362)
Q Consensus 274 ~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~ 353 (362)
+||..|+||+.+|++++.+++++..+...+..++|||+|+.+++++|+||++|+|++|+|+.|.| +.+.+.+.++..+
T Consensus 409 ~Pm~~r~dAi~aaa~ii~~l~~~~~~~~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e--~~e~l~~~i~~~i 486 (591)
T PRK13799 409 TPMDMRKDAAAAAAEIALYIEKRAAQDQHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDE--IRDAAVADILAEI 486 (591)
T ss_pred CChhhchhHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHH--HHHHHHHHHHHHH
Confidence 89877899999999999999998654322346899999997667999999999999999999998 7787777777666
Q ss_pred HHHH
Q 048461 354 LTLA 357 (362)
Q Consensus 354 ~~l~ 357 (362)
+.+.
T Consensus 487 ~~ia 490 (591)
T PRK13799 487 AAIA 490 (591)
T ss_pred HHHH
Confidence 5544
No 3
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=3.2e-46 Score=390.34 Aligned_cols=276 Identities=30% Similarity=0.444 Sum_probs=232.4
Q ss_pred HHHHHHHHHHHHcCCCCC---CCccccccCCHhHHHHHHHHHHHHHHCCC-eEEEcccCcEEEeccCCCceeeeCCCCCC
Q 048461 66 TETLQKQIDELSTFSDTP---APSVTRVLHTENDVLARSYIKNLMGISGL-SVREDAVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~---~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl-~v~~d~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
.+|+++.|.+|.+|+.++ .+|++|++||.++.++++||++||+++|+ +|++|++||+|+ +++|.+++.
T Consensus 180 ~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D~~GNl~~--------~~~g~~~~~ 251 (591)
T PRK13590 180 GNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHIDAVGNVVG--------RYKGSTPQA 251 (591)
T ss_pred HHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeECCCCCEEE--------EecCCCCCC
Confidence 368999999999997533 36999999999999999999999999999 999999999999 998876556
Q ss_pred ceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc-----------------------------cccccchhhhhcc
Q 048461 142 ASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL-----------------------------LAGIESLAKDLTS 192 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~-----------------------------~~g~~~~~e~l~~ 192 (362)
|+|+++|||||||+||+|||++||+++|++++.|+... +.|... ..+..
T Consensus 252 ~~v~~gsHlDTV~~gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~--~~~~~ 329 (591)
T PRK13590 252 KRLLTGSHYDTVRNGGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFD--PAWLD 329 (591)
T ss_pred CeEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCCh--HHHHh
Confidence 89999999999999999999999999999999998221 111111 11223
Q ss_pred cccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCC
Q 048461 193 IVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAG 272 (362)
Q Consensus 193 ~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg 272 (362)
..|.+|+++.++++..|+.+. .+.+....++++.+|+|+||||||+||.++.++|+|++++|..||+|+|+|+++|+|
T Consensus 330 ~~d~~g~~~~~al~~~g~~~~--~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV~~~~G~~~~~v~v~GkaaHag 407 (591)
T PRK13590 330 QKDADGITMREAMQHAGLCID--DIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIVTSINGSVRYVGEMIGMASHAG 407 (591)
T ss_pred ccCCCCCCHHHHHHHcCCChh--hccccccCCCCccEEEEEEeCCCHHHHHCCCceEEEeeeeccEEEEEEEEeECCCCC
Confidence 356678888888999998643 233333344678999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 273 AVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 273 ~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
++||.+|+||+.+|++++..++++.... ..+++|||.|+.+|+++||||++|++++|+|+.+.| +.+.+.+.++..
T Consensus 408 ~~P~~~r~dAi~aaa~~i~~l~~~~~~~--~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e--~~e~v~~~i~~~ 483 (591)
T PRK13590 408 TTPMDRRRDAAAAVAELALYVEQRAAQD--GDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDA--QRDAMVADVLAE 483 (591)
T ss_pred CCCchhcccHHHHHHHHHHHHHHHHhcC--CCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHH--HHHHHHHHHHHH
Confidence 8898768999999999999999875432 346889999997667999999999999999999998 778887777776
Q ss_pred HHHHH
Q 048461 353 ALTLA 357 (362)
Q Consensus 353 ~~~l~ 357 (362)
++.+.
T Consensus 484 i~~ia 488 (591)
T PRK13590 484 LEAIC 488 (591)
T ss_pred HHHHH
Confidence 66554
No 4
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=9.7e-45 Score=364.37 Aligned_cols=273 Identities=29% Similarity=0.424 Sum_probs=230.4
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCce
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
++..|+++.|.+|.+|++.+.+|++|++||++|.++++||+++|+++|+++++|..+|+++ +++|.++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~~~gNl~a--------~~~g~~~~~~~ 78 (414)
T PRK12891 7 VDGERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVDAMGNLFA--------RRAGRDPDAAP 78 (414)
T ss_pred cCHHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEE--------EecCCCCCCCe
Confidence 3456999999999999866667999999999999999999999999999999999999999 99876544589
Q ss_pred EEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc-----------------------
Q 048461 144 VATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN----------------------- 198 (362)
Q Consensus 144 Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G----------------------- 198 (362)
|+|+||+||||++|.+||+.|+++++++++.|+... +.+++. +..+.|||+
T Consensus 79 l~~~~H~DtVp~gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~----v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 79 VMTGSHADSQPTGGRYDGIYGVLGGLEVVRALNDAGIETERPVD----VVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred EEEEecccCCCCCccccchhhHHHHHHHHHHHHHcCCCCCCCeE----EEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 999999999999999999999999999999998433 344444 333456553
Q ss_pred -------chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCC
Q 048461 199 -------ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHA 271 (362)
Q Consensus 199 -------~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHA 271 (362)
.++.+++.+.|+.++...+. .++++|+|+|+|||+++|+++.+++++++++|..||+|+++|+++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~Gk~aHa 228 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGG------YPVHAAYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLTGVDAHA 228 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCccccccc------CCCCEEEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEEeECCCC
Confidence 33445666777754432222 35678999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHH
Q 048461 272 GAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKV 351 (362)
Q Consensus 272 g~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~ 351 (362)
|++|+..|+|||.++++++.+|+++..... ++.++|||+|+++++++|+||++|++++|+|..|.| +.+.+.+.++.
T Consensus 229 ~~~P~~~g~nAI~~aa~~i~~l~~~~~~~~-~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e--~~e~v~~~i~~ 305 (414)
T PRK12891 229 GTTPMAFRRDALVGAARMIAFLDALGRRDA-PDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDA--VLDRLDAALRA 305 (414)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHhcC-CCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHH--HHHHHHHHHHH
Confidence 878975579999999999999998865432 357999999997546999999999999999999999 78899988888
Q ss_pred HHHHHH
Q 048461 352 LALTLA 357 (362)
Q Consensus 352 l~~~l~ 357 (362)
+++.+.
T Consensus 306 ~~~~~~ 311 (414)
T PRK12891 306 ELARIA 311 (414)
T ss_pred HHHHHH
Confidence 877654
No 5
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=7.3e-44 Score=356.53 Aligned_cols=272 Identities=33% Similarity=0.475 Sum_probs=225.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
.|+++.|.+|.+|.+.+.+|++|+++|++|.++++||+++|+++|+++++|+++|+++ +++|+.+++|.|+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G~~~~~~~~~nl~a--------~~~g~~~~~~~l~~ 72 (401)
T TIGR01879 1 QRLWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAGLEVRFDEVGNLIG--------RKEGTEPPLEVVLS 72 (401)
T ss_pred ChHHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCcEEE--------EecCCCCCCCEEEE
Confidence 3689999999999876677999999999999999999999999999999999999999 99876544589999
Q ss_pred EecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc--------------------------
Q 048461 147 GSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN-------------------------- 198 (362)
Q Consensus 147 ~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G-------------------------- 198 (362)
+||+||||.+|+|||+.|+++++++++.|+... +.+++. +..+.|||+
T Consensus 73 ~~H~DtV~~gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~----~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~ 148 (401)
T TIGR01879 73 GSHIDTVVNGGNFDGQLGVLAGIEVVDALKEAYVVPLHPIE----VVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNIC 148 (401)
T ss_pred ecccccCCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCeE----EEEEeCCcCcCcccccccHHHHhcccchhHHHhCc
Confidence 999999999999999999999999999998543 344444 333456553
Q ss_pred ----chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcC
Q 048461 199 ----ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAV 274 (362)
Q Consensus 199 ----~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~ 274 (362)
.++.+++.+.|... ..+.++ ...++.+|+|+||||||++|..+...+++++++|..|++|+++|+++|++++
T Consensus 149 ~~~g~~~~~~~~~~g~~~--~~~~~~--~~~~~~~~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~G~~aHa~~~ 224 (401)
T TIGR01879 149 DAKGISFAEAMKACGPDL--PNQPLR--PRGDIKAYVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLNGESNHAGTT 224 (401)
T ss_pred CCCCCCHHHHHHHcCCCc--cccccc--ccccccEEEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEEEECCCCCCC
Confidence 22333444444321 111111 1235788999999999999999999999999999999999999999999888
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 275 LMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 275 P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
||..|+||+.++++++.+|+++..+.. .+.+.|+|.|+++++++|+||++|++++|+|..|.| +.+++.+.++.+++
T Consensus 225 p~~~g~nAi~~aa~~i~~l~~l~~~~~-~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~--~~e~v~~~i~~~~~ 301 (401)
T TIGR01879 225 PMSLRRDPLVAASRIIHQVEEKAKRMG-DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAA--VLRDFTQQLENDIK 301 (401)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC-CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHH--HHHHHHHHHHHHHH
Confidence 875578999999999999998865433 356889999997657899999999999999999998 77899888888887
Q ss_pred HHH
Q 048461 355 TLA 357 (362)
Q Consensus 355 ~l~ 357 (362)
.+.
T Consensus 302 ~~~ 304 (401)
T TIGR01879 302 AIS 304 (401)
T ss_pred HHH
Confidence 654
No 6
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.9e-42 Score=342.19 Aligned_cols=275 Identities=29% Similarity=0.442 Sum_probs=228.3
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCC
Q 048461 62 LSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 62 ~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
++++.++++++|.+|++|++ +.+|++|++++++|.++++||+++|+++|++++++..+|+++ +++|..+ +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~s-~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nl~a--------~~~g~~~-~ 74 (412)
T PRK12892 5 LRIDGQRVLDDLMELAAIGA-AKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRIDGIGNVFG--------RLPGPGP-G 74 (412)
T ss_pred ccccHHHHHHHHHHHHccCC-CCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEE--------EecCCCC-C
Confidence 35677899999999999998 557999999999999999999999999999999999999999 9987654 4
Q ss_pred ceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc----h---------------
Q 048461 142 ASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI----S--------------- 200 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~----~--------------- 200 (362)
|+|+|+||+||||++|++||+.|+++++++++.|+... +.+++. +..+.|||+. .
T Consensus 75 ~~l~l~gH~DtVp~~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~ 150 (412)
T PRK12892 75 PALLVGSHLDSQNLGGRYDGALGVVAGLEAARALNEHGIATRHPLD----VVAWCDEEGSRFTPGFLGSRAYAGRLDPAD 150 (412)
T ss_pred CeEEEEccccCCCCCCcccchHHHHHHHHHHHHHHHcCCCCCCCeE----EEEecCcccccccCccccHHHHHcCCCHHH
Confidence 89999999999999999999999999999999998533 455555 4456787741 1
Q ss_pred ------------HHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeC
Q 048461 201 ------------FLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTG 268 (362)
Q Consensus 201 ------------~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~ 268 (362)
+.+++.+.|+.++..++.+ +.++.+|+|+|++||+++|+.+.+.++++++||..||+|+++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~e----p~~~~~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~i~v~G~~ 226 (412)
T PRK12892 151 ALAARCRSDGVPLRDALAAAGLAGRPRPAAD----RARPKGYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYRITVTGEA 226 (412)
T ss_pred HHhCccCCCCcCHHHHHHHcCCChhhccccc----ccCccEEEEEEeccCHhHhhCCCcEEEEEEeccceEEEEEEEEEC
Confidence 1122223344444333332 235678999999999999999888899999999999999999999
Q ss_pred CCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHH
Q 048461 269 GHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENG 348 (362)
Q Consensus 269 aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~g 348 (362)
+|+++.|+..+.|||.+|++++.+|+++..+.. .++++|+|.|++++++.|+||++|++++|+|..|.| +.+++.+.
T Consensus 227 aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~~-~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~--~~~~v~~~ 303 (412)
T PRK12892 227 GHAGTTPMALRRDAGLAAAEMIAAIDEHFPRVC-GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPP--VLQRLVAL 303 (412)
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHH--HHHHHHHH
Confidence 999878875578999999999999998755432 347999999997557999999999999999999998 77888888
Q ss_pred HHHHHHHHH
Q 048461 349 VKVLALTLA 357 (362)
Q Consensus 349 i~~l~~~l~ 357 (362)
++.+++.+.
T Consensus 304 i~~~~~~~~ 312 (412)
T PRK12892 304 LEALCREIA 312 (412)
T ss_pred HHHHHHHHH
Confidence 888877654
No 7
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1e-39 Score=327.08 Aligned_cols=276 Identities=33% Similarity=0.486 Sum_probs=227.1
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCC
Q 048461 61 SLSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 61 ~~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~ 140 (362)
+++++.++++++|++|++|+|.+++|++|.++|++|.++++||+++|+++|++++++..+|+++ +++|++++
T Consensus 4 ~~~~~~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~a--------~~~g~~~~ 75 (412)
T PRK12893 4 NLRINGERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVDAIGNLFG--------RRAGTDPD 75 (412)
T ss_pred ccccCHHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEE--------EeCCCCCC
Confidence 4667889999999999999998888999999999999999999999999999999988899999 88775433
Q ss_pred CceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc-----hH-HHHHH------
Q 048461 141 LASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI-----SF-LDAAR------ 206 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~-----~~-~e~~e------ 206 (362)
+|+|+|+||+||||++|.+||+.|+++++.+++.|+... +.+++. +..+.|||+. .+ ...+.
T Consensus 76 ~~~l~l~~H~DtVp~~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~----~~~~~dEE~g~~~~~~~G~~~~~~~~~~~ 151 (412)
T PRK12893 76 APPVLIGSHLDTQPTGGRFDGALGVLAALEVVRTLNDAGIRTRRPIE----VVSWTNEEGARFAPAMLGSGVFTGALPLD 151 (412)
T ss_pred CCEEEEEecccCCCCCCcccchhhHHHHHHHHHHHHHcCCCCCCCeE----EEEEccccccccccccccHHHHhCcCChH
Confidence 589999999999999999999999999999999998533 456665 4556888742 11 11111
Q ss_pred ------------------HcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeC
Q 048461 207 ------------------SAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTG 268 (362)
Q Consensus 207 ------------------e~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~ 268 (362)
+.|+.++...+ ..+++.|+++|+++|+++++++...+++.++||..|++|+++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~G~~ 225 (412)
T PRK12893 152 DALARRDADGITLGEALARIGYRGTARVG------RRAVDAYLELHIEQGPVLEAEGLPIGVVTGIQGIRWLEVTVEGQA 225 (412)
T ss_pred HHHhccCCCCCCHHHHHHHcCCCcccccc------cCCccEEEEEEeccCHHHHHCCCcEEEEeeecccEEEEEEEEEEC
Confidence 12222111111 124678999999999999999888899999999999999999999
Q ss_pred CCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHH
Q 048461 269 GHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENG 348 (362)
Q Consensus 269 aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~g 348 (362)
+|++..|+..|+|||.+|++++.+|+++..+.. +..++|+|.|++++++.|+||++|++++|+|..|.| +.+++.+.
T Consensus 226 aHas~~p~~~G~NAI~~a~~~i~~l~~~~~~~~-~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~--~~~~i~~~ 302 (412)
T PRK12893 226 AHAGTTPMAMRRDALVAAARIILAVERIAAALA-PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDA--RLDAMEAA 302 (412)
T ss_pred CCcCCCcchhccCHHHHHHHHHHHHHHHHHhcC-CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHH--HHHHHHHH
Confidence 999867853369999999999999998865433 357899999997557999999999999999999998 77888888
Q ss_pred HHHHHHHHH
Q 048461 349 VKVLALTLA 357 (362)
Q Consensus 349 i~~l~~~l~ 357 (362)
++.+++.+.
T Consensus 303 i~~~~~~~~ 311 (412)
T PRK12893 303 LRAACAKIA 311 (412)
T ss_pred HHHHHHHHH
Confidence 888776543
No 8
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.2e-39 Score=321.48 Aligned_cols=276 Identities=33% Similarity=0.505 Sum_probs=225.3
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCce
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
++.+++++.|.+|++|+..+ ++++|+++|++|.++++||+++|+++|++++++..+|+++ +++|+.+++|+
T Consensus 6 ~~~~~~~~~~~~~~~i~~~~-~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nlia--------~~~g~~~~~~~ 76 (414)
T PRK12890 6 INGERLLARLEELAAIGRDG-PGWTRLALSDEERAARALLAAWMRAAGLEVRRDAAGNLFG--------RLPGRDPDLPP 76 (414)
T ss_pred cCHHHHHHHHHHHhccCCCC-CceeeccCCHHHHHHHHHHHHHHHHCCCEEEEcCCCcEEE--------EeCCCCCCCCE
Confidence 35789999999999998544 8999999999999999999999999999999988899999 99875434689
Q ss_pred EEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc----------------------
Q 048461 144 VATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI---------------------- 199 (362)
Q Consensus 144 Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~---------------------- 199 (362)
|+|+||+||||++|.+||+.|+++++.+++.|+... +.+++. +..+.|||+.
T Consensus 77 l~~~~H~DtVp~~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~ 152 (414)
T PRK12890 77 LMTGSHLDTVPNGGRYDGILGVLAGLEVVAALREAGIRPPHPLE----VIAFTNEEGVRFGPSMIGSRALAGTLDVEAVL 152 (414)
T ss_pred EEEeCcccCCCCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeE----EEEEecccccccCCccccHHHHHcccChHHHH
Confidence 999999999999999999999999999999987432 356555 4456787741
Q ss_pred --------hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCC
Q 048461 200 --------SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHA 271 (362)
Q Consensus 200 --------~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHA 271 (362)
.+.+.+.+.|...+.... ...++..++.|+++|++||+++++++...+++.++||..|++|+++|+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~ep~~~~~~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~Gk~aHa 230 (414)
T PRK12890 153 ATRDDDGTTLAEALRRIGGDPDALPG--ALRPPGAVAAFLELHIEQGPVLEAEGLPIGVVTAIQGIRRQAVTVEGEANHA 230 (414)
T ss_pred hccCCCCCCHHHHHHHcCCChhhccc--cccCCCCccEEEEEeeCcCHHHHhCCCceEEEEeecCcEEEEEEEEEECCCC
Confidence 111233344544332111 0001225678999999999999998888899999999999999999999999
Q ss_pred CcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHH
Q 048461 272 GAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKV 351 (362)
Q Consensus 272 g~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~ 351 (362)
++.|+.++.|||..+++++.+|+++..+.. ++.++|+|.|++++++.|+||++|++++|+|..|.| +.+++.+.++.
T Consensus 231 s~~P~~~g~nAI~~~~~~i~~l~~~~~~~~-~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~--~~~~i~~~i~~ 307 (414)
T PRK12890 231 GTTPMDLRRDALVAAAELVTAMERRARALL-HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDA--VLEAAEAALLA 307 (414)
T ss_pred CcCChhhccCHHHHHHHHHHHHHHHHHhcC-CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHH--HHHHHHHHHHH
Confidence 877875568999999999999999865433 467899999997557999999999999999999998 77888888887
Q ss_pred HHHHHH
Q 048461 352 LALTLA 357 (362)
Q Consensus 352 l~~~l~ 357 (362)
+++.+.
T Consensus 308 ~~~~~~ 313 (414)
T PRK12890 308 ELEAIA 313 (414)
T ss_pred HHHHHH
Confidence 776543
No 9
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5e-38 Score=315.43 Aligned_cols=279 Identities=36% Similarity=0.546 Sum_probs=225.1
Q ss_pred cccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCC
Q 048461 62 LSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 62 ~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
++++.+++++.|++|++|++.+++|++|+|.|.+|.++++||+++|+++|++++++..+|+++ +++|..+++
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~~~~nl~a--------~~~g~~~~~ 73 (413)
T PRK09290 2 LRIDAERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVDAVGNLFG--------RLEGRDPDA 73 (413)
T ss_pred CCcCHHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEE--------EecCCCCCC
Confidence 467899999999999999666779999999999999999999999999999999988899999 887643235
Q ss_pred ceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc------hHHH----------
Q 048461 142 ASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI------SFLD---------- 203 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~------~~~e---------- 203 (362)
|.|+|+||+||||++|.+||+.|+++++.+++.|+... +.+++. +..+.|||+. ....
T Consensus 74 ~~l~l~gH~DtVp~~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~ 149 (413)
T PRK09290 74 PAVLTGSHLDTVPNGGRFDGPLGVLAGLEAVRTLNERGIRPRRPIE----VVAFTNEEGSRFGPAMLGSRVFTGALTPED 149 (413)
T ss_pred CEEEEecCccCCCCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeE----EEEEcCCccccccCccccHHHHHcccCHHH
Confidence 89999999999999999999999999999999997533 345555 4556887741 1111
Q ss_pred --------------HHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCC
Q 048461 204 --------------AARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGG 269 (362)
Q Consensus 204 --------------~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~a 269 (362)
.+.+.|++++..++.+ .++.++..|++.|+++|.++|+++....++.++||..|++|+++|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~--~ept~~~~~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~~~i~v~Gk~a 227 (413)
T PRK09290 150 ALALRDADGVSFAEALAAIGYDGDEAVGAA--RARRDIKAFVELHIEQGPVLEAEGLPIGVVTGIVGQRRYRVTFTGEAN 227 (413)
T ss_pred HHhccCCCCCCHHHHHHHcCCChhhccccc--cCCCCccEEEEEEeccCHHHHHCCCcEEEEeeeeccEEEEEEEEEECC
Confidence 1122344433211110 012345678899999999999998888899999999999999999999
Q ss_pred CCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHH
Q 048461 270 HAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGV 349 (362)
Q Consensus 270 HAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi 349 (362)
|++..|+..+.|||..+++++.+|+++..+.. ++.++++|.|++++.+.|+||++|++++|+|..|.| +.+++.+.+
T Consensus 228 Has~~P~~~g~NAI~~~~~~i~~l~~l~~~~~-~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e--~~e~v~~~i 304 (413)
T PRK09290 228 HAGTTPMALRRDALLAAAEIILAVERIAAAHG-PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDA--VLDALVAEL 304 (413)
T ss_pred CCCCCCchhccCHHHHHHHHHHHHHHHHHhcC-CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHH--HHHHHHHHH
Confidence 98767843469999999999999998764433 357899999997557999999999999999999998 778888888
Q ss_pred HHHHHHHH
Q 048461 350 KVLALTLA 357 (362)
Q Consensus 350 ~~l~~~l~ 357 (362)
+.+++.+.
T Consensus 305 ~~~~~~~~ 312 (413)
T PRK09290 305 RAAAEAIA 312 (413)
T ss_pred HHHHHHHH
Confidence 88777653
No 10
>PRK07473 carboxypeptidase; Provisional
Probab=99.97 E-value=1.7e-30 Score=258.30 Aligned_cols=233 Identities=18% Similarity=0.101 Sum_probs=169.8
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc----c-CcEEEeccCCCcee
Q 048461 59 VSSLSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA----V-GNIYGEISSSSRGV 133 (362)
Q Consensus 59 ~~~~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~----~-gNvia~~~~~~~~~ 133 (362)
..++..+.++++++|++|++|+|++.. ..+..++.+|+.++|+++|++++..+ . .|+++ +
T Consensus 3 ~~~~~~~~~~~~~~l~~Lv~i~S~s~~-------~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~--------~ 67 (376)
T PRK07473 3 PANLPFDSEAMLAGLRPWVECESPTWD-------AAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRA--------R 67 (376)
T ss_pred cccCCcCHHHHHHHHHHHhcCCCCCCC-------HHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEE--------E
Confidence 346778899999999999999997421 12235677899999999999988633 2 26888 8
Q ss_pred eeCCCCCCceEEEEecccCCCCCC------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhccc
Q 048461 134 WIGNEAELASVATGSHIDAIPYSG------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSI 193 (362)
Q Consensus 134 ~~G~~~~~p~Ill~sHlDTVp~gG------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~ 193 (362)
+++.++++|+|+|+||+||||+.+ ..|+|+|+++++.|++.|+... +.+++. +..+
T Consensus 68 ~~~~~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~----~~~~ 143 (376)
T PRK07473 68 FPHPRQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPIT----VLFT 143 (376)
T ss_pred eCCCCCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEE----EEEe
Confidence 865333458999999999997532 2478999999999999987543 233444 3445
Q ss_pred ccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCc
Q 048461 194 VDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGA 273 (362)
Q Consensus 194 ~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~ 273 (362)
.||+. |..+...++.+... ..+.. .+.|++....+++++++|..|++|+++|+++|+|+
T Consensus 144 ~dEE~----------g~~g~~~~~~~~~~---~~d~~--------iv~ep~~~~~~v~~~~~G~~~~~v~~~G~~aHag~ 202 (376)
T PRK07473 144 PDEEV----------GTPSTRDLIEAEAA---RNKYV--------LVPEPGRPDNGVVTGRYAIARFNLEATGRPSHAGA 202 (376)
T ss_pred CCccc----------CCccHHHHHHHhhc---cCCEE--------EEeCCCCCCCCEEEECeeeEEEEEEEEeEcCCCCC
Confidence 77652 22222222221100 11111 23455544567999999999999999999999988
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCC
Q 048461 274 VLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPE 337 (362)
Q Consensus 274 ~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~ 337 (362)
+|+. ++|||..|++++.+|+++.. ...++|+|.|++ |.+.|+||++|+++++.|....
T Consensus 203 ~p~~-g~nAi~~~~~~i~~l~~~~~----~~~~~~vg~i~g-g~~~n~VP~~~~~~~d~r~~~~ 260 (376)
T PRK07473 203 TLSE-GRSAIREMARQILAIDAMTT----EDCTFSVGIVHG-GQWVNCVATTCTGEALSMAKRQ 260 (376)
T ss_pred Cccc-CcCHHHHHHHHHHHHHHhcC----CCceEeEeeEEc-CCCCcCCCCceEEEEEEEeCCH
Confidence 8987 58999999999999998743 246899999996 5789999999999998775544
No 11
>PRK06915 acetylornithine deacetylase; Validated
Probab=99.97 E-value=6.7e-29 Score=249.64 Aligned_cols=241 Identities=18% Similarity=0.124 Sum_probs=181.1
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc---------------------ccCcE
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED---------------------AVGNI 122 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d---------------------~~gNv 122 (362)
.+.+++++++++|++|||+ |.+|.++++||+++|+++|+++++. ..+|+
T Consensus 14 ~~~~~~~~~l~~lv~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl 83 (422)
T PRK06915 14 SHEEEAVKLLKRLIQEKSV----------SGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNI 83 (422)
T ss_pred hhHHHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceE
Confidence 3467899999999999986 4678999999999999999987531 24799
Q ss_pred EEeccCCCceeeeCCCCCCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc-
Q 048461 123 YGEISSSSRGVWIGNEAELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL- 179 (362)
Q Consensus 123 ia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~- 179 (362)
++ +++|.++ +|+|+|++||||||+++ ..|+|+|+++++.+++.|+...
T Consensus 84 ia--------~~~g~~~-~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~ 154 (422)
T PRK06915 84 VA--------TLKGSGG-GKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGI 154 (422)
T ss_pred EE--------EEcCCCC-CCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCC
Confidence 99 8877543 58999999999999752 1278889999999999887533
Q ss_pred -cccccchhhhhcccccCC-cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecc
Q 048461 180 -LAGIESLAKDLTSIVDGK-NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAP 257 (362)
Q Consensus 180 -~~g~~~~~e~l~~~~D~~-G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~ 257 (362)
+.+++. +..+.||| |......+-..|+.+ +.. +.++++...++.+++|.
T Consensus 155 ~~~~~v~----~~~~~dEE~g~~G~~~~~~~~~~~---------------d~~----------i~~ep~~~~i~~~~~G~ 205 (422)
T PRK06915 155 ELKGDVI----FQSVIEEESGGAGTLAAILRGYKA---------------DGA----------IIPEPTNMKFFPKQQGS 205 (422)
T ss_pred CCCCcEE----EEEecccccCCcchHHHHhcCcCC---------------CEE----------EECCCCCccceeecccE
Confidence 455554 33456765 211111111122211 111 12234445578899999
Q ss_pred eEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhC-----C------CCeEEEEEEEEecCCccceecCeE
Q 048461 258 ASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESG-----S------IDTVGTVGILELHPGAINSIPIKS 326 (362)
Q Consensus 258 ~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~-----~------~~~t~tvG~I~~gg~a~NvVP~~a 326 (362)
.+++|+++|+++|++ .|+. +.||+.++++++.+|+++..... + .+.++|+|.|++ |.+.|+||++|
T Consensus 206 ~~~~i~v~G~~~H~s-~p~~-g~nAi~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~g-G~~~nvvP~~a 282 (422)
T PRK06915 206 MWFRLHVKGKAAHGG-TRYE-GVSAIEKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEG-GSWPSSVPDSV 282 (422)
T ss_pred EEEEEEEEeeccccC-CCCc-CcCHHHHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeC-CCCCCccCcEE
Confidence 999999999999997 7876 69999999999999998764211 0 145899999996 57999999999
Q ss_pred EEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 327 QLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 327 ~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
++.+|+|..|.+ +.+++.+.++..++.+.
T Consensus 283 ~~~~d~R~~p~~--~~~~v~~~i~~~l~~~~ 311 (422)
T PRK06915 283 ILEGRCGIAPNE--TIEAAKEEFENWIAELN 311 (422)
T ss_pred EEEEEEEECCCC--CHHHHHHHHHHHHHHHh
Confidence 999999999999 78888888887776543
No 12
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.96 E-value=2.6e-28 Score=246.19 Aligned_cols=242 Identities=18% Similarity=0.159 Sum_probs=181.1
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE---------------------cccCc
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE---------------------DAVGN 121 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~---------------------d~~gN 121 (362)
..+.++++++|++|++|+|. |.+|.++++||+++|+++|+++++ +..+|
T Consensus 16 ~~~~~~~~~~l~~li~ipS~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 85 (427)
T PRK06837 16 DAGFDAQVAFTQDLVRFPST----------RGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPN 85 (427)
T ss_pred HhhhHHHHHHHHHHhccCCC----------CCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCce
Confidence 34668899999999999996 456889999999999999998754 23579
Q ss_pred EEEeccCCCceeeeCCCCCCceEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhcc
Q 048461 122 IYGEISSSSRGVWIGNEAELASVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSRL 179 (362)
Q Consensus 122 via~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~~ 179 (362)
|++ +++|..+++|+|+|.||+||||++ |..|+|+|+++++.+++.|+...
T Consensus 86 l~a--------~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~ 157 (427)
T PRK06837 86 VVG--------TYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAG 157 (427)
T ss_pred EEE--------EecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcC
Confidence 999 887754446899999999999985 33488999999999999887433
Q ss_pred --cccccchhhhhcccccCC-cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeec
Q 048461 180 --LAGIESLAKDLTSIVDGK-NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAA 256 (362)
Q Consensus 180 --~~g~~~~~e~l~~~~D~~-G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG 256 (362)
+.+++. +..+.||| |......+...|+. .+..+ +. ++....++.+++|
T Consensus 158 ~~~~~~i~----~~~~~dEE~~g~g~~~~~~~~~~---------------~d~~i--------v~--ep~~~~i~~~~~G 208 (427)
T PRK06837 158 LAPAARVH----FQSVIEEESTGNGALSTLQRGYR---------------ADACL--------IP--EPTGEKLVRAQVG 208 (427)
T ss_pred CCCCCcEE----EEEEeccccCCHhHHHHHhcCcC---------------CCEEE--------Ec--CCCCCccccccce
Confidence 345554 23345654 21111111112221 11111 12 2333457788999
Q ss_pred ceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhC------------CCCeEEEEEEEEecCCccceecC
Q 048461 257 PASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESG------------SIDTVGTVGILELHPGAINSIPI 324 (362)
Q Consensus 257 ~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~------------~~~~t~tvG~I~~gg~a~NvVP~ 324 (362)
..+++|+++|+++|+| .|+. |.||+..+++++.+|+++..... ..+.++|+|.|++ |...|+||+
T Consensus 209 ~~~~~i~v~G~~~Hs~-~p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~g-G~~~nvVP~ 285 (427)
T PRK06837 209 VIWFRLRVRGAPVHVR-EAGT-GANAIDAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKG-GDWASSVPA 285 (427)
T ss_pred eEEEEEEEEeeccccC-Cccc-CcCHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeC-CCCCCccCC
Confidence 9999999999999998 6875 69999999999999988753210 0245899999996 578999999
Q ss_pred eEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 325 KSQLEIGYSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 325 ~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
+|++.+++|..|.+ +.+++.+.++.+++..
T Consensus 286 ~~~~~~~ir~~p~~--~~~~v~~~i~~~~~~~ 315 (427)
T PRK06837 286 WCDLDCRIAIYPGV--TAADAQAEIEACLAAA 315 (427)
T ss_pred EEEEEEEEeECCCC--CHHHHHHHHHHHHHHH
Confidence 99999999999998 7899998888887653
No 13
>PRK07338 hypothetical protein; Provisional
Probab=99.96 E-value=8.1e-29 Score=247.42 Aligned_cols=246 Identities=15% Similarity=0.072 Sum_probs=179.2
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc------------------CcEEE
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV------------------GNIYG 124 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~------------------gNvia 124 (362)
..+.++++++|.+|++|+|.+.. ...+.++++||+++|+++|++++..+. .|+++
T Consensus 13 ~~~~~~~~~~l~~lv~i~S~s~~-------~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a 85 (402)
T PRK07338 13 DDRQAPMLEQLIAWAAINSGSRN-------LDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHV 85 (402)
T ss_pred hhhHHHHHHHHHHHHhccCCCCC-------HHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEE
Confidence 34578999999999999986421 123578899999999999998875321 48999
Q ss_pred eccCCCceeeeCCCCCCceEEEEecccCCCCC------------------CccccHHHHHHHHHHHHHhhhcc--ccccc
Q 048461 125 EISSSSRGVWIGNEAELASVATGSHIDAIPYS------------------GKYDGVTGVLGALEAINVLKSRL--LAGIE 184 (362)
Q Consensus 125 ~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~g------------------G~~Dg~~Gv~aal~a~~~L~s~~--~~g~~ 184 (362)
++++.. .++|+|.||+||||++ |..|+|+|+++++.|++.|+... +.+++
T Consensus 86 --------~~~~~~--~~~lll~gH~DvVp~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i 155 (402)
T PRK07338 86 --------SVRPEA--PRQVLLTGHMDTVFPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGY 155 (402)
T ss_pred --------EECCCC--CccEEEEeecCccCCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCE
Confidence 885432 2579999999999974 12478999999999999987433 23344
Q ss_pred chhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEE
Q 048461 185 SLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADF 264 (362)
Q Consensus 185 ~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v 264 (362)
. +..+.|||. |..+....+.+.. ...+ +.++. |++.....++.+++|..+++|++
T Consensus 156 ~----~~~~~dEE~----------g~~g~~~~~~~~~---~~~~--~~i~~------ep~~~~~~v~~~~kG~~~~~v~v 210 (402)
T PRK07338 156 D----VLINPDEEI----------GSPASAPLLAELA---RGKH--AALTY------EPALPDGTLAGARKGSGNFTIVV 210 (402)
T ss_pred E----EEEECCccc----------CChhhHHHHHHHh---ccCc--EEEEe------cCCCCCCcEEeecceeEEEEEEE
Confidence 4 334577652 2111111221110 0111 12232 33322344678899999999999
Q ss_pred EeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHH
Q 048461 265 EGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCED 344 (362)
Q Consensus 265 ~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed 344 (362)
+|+++|+|..|+. +.||+.+|++++.+|+++.... ..+++|+|.|++ |++.|+||++|++++|+|..|.| +.++
T Consensus 211 ~G~~aHs~~~p~~-g~nAi~~~~~~i~~l~~l~~~~--~~~t~~vg~i~g-G~~~nvVP~~a~~~~d~R~~~~~--~~~~ 284 (402)
T PRK07338 211 TGRAAHAGRAFDE-GRNAIVAAAELALALHALNGQR--DGVTVNVAKIDG-GGPLNVVPDNAVLRFNIRPPTPE--DAAW 284 (402)
T ss_pred EeEcccCCCCccc-CccHHHHHHHHHHHHHhhhccC--CCcEEEEEEEec-CCCCceeccccEEEEEeccCCHH--HHHH
Confidence 9999999876886 5999999999999998875432 357899999996 58999999999999999999998 7888
Q ss_pred HHHHHHHHHHHH
Q 048461 345 MENGVKVLALTL 356 (362)
Q Consensus 345 ~~~gi~~l~~~l 356 (362)
+.+.++.+++.+
T Consensus 285 v~~~i~~~~~~~ 296 (402)
T PRK07338 285 AEAELKKLIAQV 296 (402)
T ss_pred HHHHHHHHHhcc
Confidence 888888777654
No 14
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=99.96 E-value=3.3e-28 Score=244.28 Aligned_cols=245 Identities=14% Similarity=0.107 Sum_probs=182.4
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc-----CcEEEeccCCCceeeeCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV-----GNIYGEISSSSRGVWIGN 137 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~-----gNvia~~~~~~~~~~~G~ 137 (362)
..+.++++++|++|++|+|.++. ...+.++++||+++|+++|+++++++. .|+++ +++|+
T Consensus 33 ~~~~~~~~~~l~~lv~i~S~s~~-------~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia--------~~~g~ 97 (410)
T PRK06133 33 QQEQPAYLDTLKELVSIESGSGD-------AEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVA--------TFKGT 97 (410)
T ss_pred HHhHHHHHHHHHHHHcCCCCCCC-------HHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEE--------EECCC
Confidence 34668999999999999997532 134568999999999999999887542 47999 88764
Q ss_pred CCCCceEEEEecccCCCCCC------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCC
Q 048461 138 EAELASVATGSHIDAIPYSG------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 138 ~~~~p~Ill~sHlDTVp~gG------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~ 197 (362)
+ .|+|+|.||+||||+++ ..|+|.|+++++.+++.|+... +.+++. +..+.|||
T Consensus 98 ~--~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~----~~~~~dEE 171 (410)
T PRK06133 98 G--KRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLT----VLFNPDEE 171 (410)
T ss_pred C--CceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEE----EEEECCcc
Confidence 2 48999999999999754 2478999999999999987543 335555 33457765
Q ss_pred cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 198 NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 198 G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
. |..+....+.... .+.+..+.. ++......++.+++|..+++|+++|+++|+|+.|+.
T Consensus 172 ~----------g~~G~~~~~~~~~---~~~d~~i~~--------ep~~~~~~v~~~~~G~~~~~v~v~G~~~Hsg~~p~~ 230 (410)
T PRK06133 172 T----------GSPGSRELIAELA---AQHDVVFSC--------EPGRAKDALTLATSGIATALLEVKGKASHAGAAPEL 230 (410)
T ss_pred c----------CCccHHHHHHHHh---ccCCEEEEe--------CCCCCCCCEEEeccceEEEEEEEEeeccccCCCccc
Confidence 2 1111111221110 012222222 222221357788999999999999999999878986
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 278 NRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
+.||+..+++++..|+++.... ...++|++.|++ |++.|+||++|++++|+|..|.+ +.+++.+.++.+++.
T Consensus 231 -g~nAi~~~~~~i~~l~~~~~~~--~~~t~~~~~i~g-G~~~nvIP~~~~~~~diR~~~~~--~~~~v~~~i~~~~~~ 302 (410)
T PRK06133 231 -GRNALYELAHQLLQLRDLGDPA--KGTTLNWTVAKA-GTNRNVIPASASAQADVRYLDPA--EFDRLEADLQEKVKN 302 (410)
T ss_pred -CcCHHHHHHHHHHHHHhccCCC--CCeEEEeeEEEC-CCCCceeCCccEEEEEEEECCHH--HHHHHHHHHHHHHhc
Confidence 5899999999999998875432 357899999996 58999999999999999999998 788888888877654
No 15
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.96 E-value=2.9e-28 Score=239.12 Aligned_cols=226 Identities=15% Similarity=0.147 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
++++++|++|++|+|+ |++|.++++||+++|+++|+++++++.+|++. .| .|+|+|
T Consensus 10 ~~~~~~l~~lv~i~s~----------s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~----------~g----~~~lll 65 (346)
T PRK00466 10 QKAKELLLDLLSIYTP----------SGNETNATKFFEKISNELNLKLEILPDSNSFI----------LG----EGDILL 65 (346)
T ss_pred HHHHHHHHHHhcCCCC----------CCCHHHHHHHHHHHHHHcCCeEEEecCCCcEe----------cC----CCeEEE
Confidence 6889999999999985 34688999999999999999999988889765 23 257999
Q ss_pred EecccCCCC-------------CCccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCc-chHHHHHHHcCCCC
Q 048461 147 GSHIDAIPY-------------SGKYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKN-ISFLDAARSAGYAK 212 (362)
Q Consensus 147 ~sHlDTVp~-------------gG~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G-~~~~e~~ee~G~~~ 212 (362)
+||+||||. -|..|+|+|+++++.+++.|++..+ ++. +..+.||++ ......+-+.+..
T Consensus 66 ~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~~--~i~----~~~~~dEE~g~~G~~~l~~~~~~- 138 (346)
T PRK00466 66 ASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKGI--KVM----VSGLADEESTSIGAKELVSKGFN- 138 (346)
T ss_pred EeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCC--CEE----EEEEcCcccCCccHHHHHhcCCC-
Confidence 999999997 2567999999999999999875432 233 445678763 1112222222211
Q ss_pred ccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHH
Q 048461 213 EHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALA 292 (362)
Q Consensus 213 ~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~ 292 (362)
.+.+ .+.|+++ ...++.+++|..|++|+++|+++|+| .|. .|||.+|++++.+
T Consensus 139 --------------~d~~--------i~~ep~~-~~~i~~~~kG~~~~~i~v~G~~~Has-~p~---~nAi~~~~~~l~~ 191 (346)
T PRK00466 139 --------------FKHI--------IVGEPSN-GTDIVVEYRGSIQLDIMCEGTPEHSS-SAK---SNLIVDISKKIIE 191 (346)
T ss_pred --------------CCEE--------EEcCCCC-CCceEEEeeEEEEEEEEEEeeccccC-CCC---cCHHHHHHHHHHH
Confidence 1111 1223332 13588899999999999999999997 563 5999999999999
Q ss_pred HHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 293 VEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 293 L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
|++..... ..+++|+|.|++ |+..|+||++|++++|+|..|++ +.+++.+.++..++.
T Consensus 192 l~~~~~~~--~~~t~~~~~i~g-G~~~NvvP~~a~~~~diR~~p~~--~~~~v~~~i~~~~~~ 249 (346)
T PRK00466 192 VYKQPENY--DKPSIVPTIIRA-GESYNVTPAKLYLHFDVRYAINN--KRDDLISEIKDKFQE 249 (346)
T ss_pred HHhccccC--CCCcceeeEEec-CCcCcccCCceEEEEEEEeCCCC--CHHHHHHHHHHHHhh
Confidence 98753322 356899999996 58999999999999999999998 788988888876653
No 16
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.96 E-value=6.2e-28 Score=242.73 Aligned_cols=249 Identities=12% Similarity=0.087 Sum_probs=184.1
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc------------cCcEEEeccCCCc
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA------------VGNIYGEISSSSR 131 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~------------~gNvia~~~~~~~ 131 (362)
.+.++++++|++|++|+|.+++| .+|.++++||+++|+++|++++..+ ..|+++
T Consensus 11 ~~~~~~~~~l~~Lv~i~S~~~~g-------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia------- 76 (427)
T PRK13013 11 ARRDDLVALTQDLIRIPTLNPPG-------RAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVA------- 76 (427)
T ss_pred HhHHHHHHHHHHHhcCCCcCCCC-------ccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEE-------
Confidence 35678999999999999986544 3578999999999999999887542 248999
Q ss_pred eeeeCCCCCCceEEEEecccCCCCCC--------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhh
Q 048461 132 GVWIGNEAELASVATGSHIDAIPYSG--------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKD 189 (362)
Q Consensus 132 ~~~~G~~~~~p~Ill~sHlDTVp~gG--------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~ 189 (362)
+++|+. ++|+|+|.||+||||++. ..|+|+|+++++.|++.|+... +.+++.
T Consensus 77 -~~~g~~-~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~---- 150 (427)
T PRK13013 77 -RRQGAR-DGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIE---- 150 (427)
T ss_pred -EecCCC-CCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEE----
Confidence 887653 347899999999999752 2478899999999999987432 355555
Q ss_pred hcccccCC-c-chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEee
Q 048461 190 LTSIVDGK-N-ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGT 267 (362)
Q Consensus 190 l~~~~D~~-G-~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~ 267 (362)
+..+.||| | ......+.+.|... ....+..+ +.|+++. ..++.+++|..+++|+++|+
T Consensus 151 ~~~~~dEE~g~~~g~~~l~~~~~~~-----------~~~~d~~i--------~~ep~~~-~~i~~~~~G~~~~~i~v~G~ 210 (427)
T PRK13013 151 ISGTADEESGGFGGVAYLAEQGRFS-----------PDRVQHVI--------IPEPLNK-DRICLGHRGVWWAEVETRGR 210 (427)
T ss_pred EEEEeccccCChhHHHHHHhcCCcc-----------ccCCCEEE--------EecCCCC-CceEEeeeeEEEEEEEEEcc
Confidence 34467776 2 11333444444210 00112221 1222221 24778899999999999999
Q ss_pred CCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhh--------C-----CCCeEEEEEEEEecCCcc----------ceecC
Q 048461 268 GGHAGAVLMPNRNDAGLAAAELALAVEKHVLES--------G-----SIDTVGTVGILELHPGAI----------NSIPI 324 (362)
Q Consensus 268 ~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~--------~-----~~~~t~tvG~I~~gg~a~----------NvVP~ 324 (362)
++|++ .|+. ++|||..+++++.+|++...+. . ....++|+|.|++ |... |+||+
T Consensus 211 ~~H~~-~p~~-g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g-G~~~~~~~~~~~~~n~IPd 287 (427)
T PRK13013 211 IAHGS-MPFL-GDSAIRHMGAVLAEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHG-GEPEQDPDYTGLPAPCVAD 287 (427)
T ss_pred ccccC-CCCc-CcCHHHHHHHHHHHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeC-CCccccccccccccccCCc
Confidence 99987 7886 6999999999999998753210 0 0246899999996 4555 99999
Q ss_pred eEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 325 KSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 325 ~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+|++++|+|+.|.| +.+++.+.++.+++.+.
T Consensus 288 ~a~~~idiR~~p~~--~~~~v~~~i~~~i~~~~ 318 (427)
T PRK13013 288 RCRIVIDRRFLIEE--DLDEVKAEITALLERLK 318 (427)
T ss_pred eEEEEEEEEeCCCC--CHHHHHHHHHHHHHHHH
Confidence 99999999999998 88999999998887654
No 17
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.96 E-value=9.2e-28 Score=237.74 Aligned_cols=238 Identities=18% Similarity=0.186 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc----CcEEEeccCCCceeeeCCCCCCc
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV----GNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~----gNvia~~~~~~~~~~~G~~~~~p 142 (362)
++++++|++|++|+|+ |.+|.++++||.++|+++|++++.++. .|+++ ++ |++ .|
T Consensus 2 ~~~~~~l~~Lv~i~s~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a--------~~-g~~--~~ 60 (377)
T PRK08588 2 EEKIQILADIVKINSV----------NDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVA--------EI-GSG--SP 60 (377)
T ss_pred hHHHHHHHHHhcCCCC----------CCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEE--------Ee-CCC--Cc
Confidence 6789999999999996 356889999999999999999876543 58999 87 432 38
Q ss_pred eEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc
Q 048461 143 SVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN 198 (362)
Q Consensus 143 ~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G 198 (362)
+|+|.||+||||+++ ..|+|+|+++++.+++.|+... +.+++. +..+.||+.
T Consensus 61 ~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~----l~~~~dEE~ 136 (377)
T PRK08588 61 VLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIR----LLATAGEEV 136 (377)
T ss_pred eEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEE----EEEEccccc
Confidence 999999999999852 2378889999999999887432 355655 344678762
Q ss_pred -chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 199 -ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 199 -~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
......+-+.|.. .+++.++ +. ++....++.+++|..+++|+++|+++|++ .|+.
T Consensus 137 g~~G~~~~~~~~~~-------------~~~d~~i--------~~--ep~~~~i~~~~~G~~~~~i~~~G~~~Hss-~p~~ 192 (377)
T PRK08588 137 GELGAKQLTEKGYA-------------DDLDALI--------IG--EPSGHGIVYAHKGSMDYKVTSTGKAAHSS-MPEL 192 (377)
T ss_pred CchhHHHHHhcCcc-------------CCCCEEE--------Ee--cCCCceeEEEEEEEEEEEEEEEeechhcc-CCcc
Confidence 2222232232321 1122221 12 23345688899999999999999999987 7876
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhC-----CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 278 NRNDAGLAAAELALAVEKHVLESG-----SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~~~-----~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
+.|||..+++++.+++++..... ...+++|+|.|++ |...|+||++|++++|+|..|.+ +.+++.+.++.+
T Consensus 193 -g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~g-G~~~nvip~~~~~~~d~R~~p~~--~~~~v~~~i~~~ 268 (377)
T PRK08588 193 -GVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIING-GEQVNSVPDEAELEFNIRTIPEY--DNDQVISLLQEI 268 (377)
T ss_pred -ccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEeC-CCcCCcCCCeEEEEEEeccCCCC--CHHHHHHHHHHH
Confidence 69999999999999988743321 1357999999996 57999999999999999999999 889999999988
Q ss_pred HHHHH
Q 048461 353 ALTLA 357 (362)
Q Consensus 353 ~~~l~ 357 (362)
++.+.
T Consensus 269 ~~~~~ 273 (377)
T PRK08588 269 INEVN 273 (377)
T ss_pred HHHHh
Confidence 87553
No 18
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.96 E-value=1.6e-28 Score=241.55 Aligned_cols=237 Identities=18% Similarity=0.137 Sum_probs=176.3
Q ss_pred HHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc-------cCcEEEeccCCCceeeeCCCCC
Q 048461 68 TLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA-------VGNIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 68 ~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~-------~gNvia~~~~~~~~~~~G~~~~ 140 (362)
|+++.|++|++|++. |++|.++++||+++|+++|++++.++ ..|+++ +++|+. +
T Consensus 1 ~~~~~~~~l~~i~s~----------s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~--------~~~g~~-~ 61 (361)
T TIGR01883 1 RLKKYFLELIQIDSE----------SGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIA--------RLPGTV-K 61 (361)
T ss_pred ChHHHHHHHeecCCC----------CCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEE--------EEeCCC-C
Confidence 478999999999986 45789999999999999999988764 579999 887764 3
Q ss_pred CceEEEEecccCCCCCC---------------c----cccHHHHHHHHHHHHHhhhc-ccccccchhhhhcccccCCcch
Q 048461 141 LASVATGSHIDAIPYSG---------------K----YDGVTGVLGALEAINVLKSR-LLAGIESLAKDLTSIVDGKNIS 200 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG---------------~----~Dg~~Gv~aal~a~~~L~s~-~~~g~~~~~e~l~~~~D~~G~~ 200 (362)
+|+|+|+||+||||+++ . .|+|.|++++|.+++.|++. .+.+++. +..+.|||.
T Consensus 62 ~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~~~~~~v~----~~~~~~EE~-- 135 (361)
T TIGR01883 62 FDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEETPHGTIE----FIFTVKEEL-- 135 (361)
T ss_pred CCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcCCCCCCEE----EEEEccccc--
Confidence 48999999999999742 2 48999999999999998743 2445555 345677652
Q ss_pred HHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCC
Q 048461 201 FLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRN 280 (362)
Q Consensus 201 ~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~ 280 (362)
|..++...+.. .+..-+.+|+ +++.....++.+.+|..|++|+++|+++|+|+.|+. ++
T Consensus 136 --------g~~G~~~~~~~------~~~~~~~~~~------~~~~~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~-g~ 194 (361)
T TIGR01883 136 --------GLIGMRLFDES------KITAAYGYCL------DAPGEVGNIQLAAPTQVKVDATIAGKDAHAGLVPED-GI 194 (361)
T ss_pred --------CchhHhHhChh------hcCcceeEEE------eCCCCcceEEecCCceEEEEEEEEeeecCCCCCccc-Cc
Confidence 22222111111 1111122333 222223347788999999999999999999778986 59
Q ss_pred cHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 281 DAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 281 nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
||+..+++++.+|+... .. ...++|+|.|++ |.+.|+||++|++++|+|+.|.+ +.+++.+.++.+++.+
T Consensus 195 nAi~~~~~~i~~l~~~~--~~-~~~~~~i~~i~g-G~~~nvVP~~~~~~~diR~~~~~--~~~~~~~~i~~~i~~~ 264 (361)
T TIGR01883 195 SAISVARMAIHAMRLGR--ID-EETTANIGSFSG-GVNTNIVQDEQLIVAEARSLSFR--KAEAQVQTMRERFEQA 264 (361)
T ss_pred CHHHHHHHHHHhccccC--CC-Cccccccceeec-CCccCccCCceEEEEEEecCCHH--HHHHHHHHHHHHHHHH
Confidence 99999999999986532 12 346889999996 57999999999999999999987 5566666666666544
No 19
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=99.96 E-value=1.2e-27 Score=238.75 Aligned_cols=236 Identities=17% Similarity=0.158 Sum_probs=176.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCCCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
..+++++++++|++|+|+ |.+|.++++||.++|+++|++ ++++..+|+++ ++ |.+ .|+
T Consensus 11 ~~~~~~~~~~~lv~i~s~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~--------~~-g~~--~~~ 69 (395)
T TIGR03320 11 YRGDMIRFLRDLVAIPSE----------SGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLG--------YI-GHG--PKL 69 (395)
T ss_pred HHHHHHHHHHHHHcCCCC----------CCchHHHHHHHHHHHHHhCCcEEEECCCCCEEE--------Ee-CCC--CcE
Confidence 457899999999999996 356789999999999999996 56777789999 77 432 378
Q ss_pred EEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhccc--ccccchhhhhcccccCCc-
Q 048461 144 VATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSRLL--AGIESLAKDLTSIVDGKN- 198 (362)
Q Consensus 144 Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~~~--~g~~~~~e~l~~~~D~~G- 198 (362)
|+|.+|+||||++ |..|+|+|+++++.|++.|+.... .+++. +..+.||+.
T Consensus 70 l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~----~~~~~dEE~~ 145 (395)
T TIGR03320 70 IAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLL----VTGTVQEEDC 145 (395)
T ss_pred EEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEE----EEeccccccc
Confidence 9999999999974 224778999999999999875332 23333 333455542
Q ss_pred --chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCC
Q 048461 199 --ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLM 276 (362)
Q Consensus 199 --~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~ 276 (362)
......+++.+..+ +..+ +.| ++...++.+++|..+++|+++|+++|+| .|+
T Consensus 146 ~g~~~~~~~~~~~~~~---------------d~~i--------v~e--p~~~~i~~g~~G~~~~~v~~~G~~~Hss-~p~ 199 (395)
T TIGR03320 146 DGLCWQYIIEEDGIKP---------------EFVV--------ITE--PTDMNIYRGQRGRMEIKVTVKGVSCHGS-APE 199 (395)
T ss_pred CchHHHHHHHhcCCCC---------------CEEE--------EcC--CCccceEEecceEEEEEEEEeeeccccC-CCC
Confidence 11111122222211 1111 223 3445688899999999999999999997 788
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhhC--C--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 277 PNRNDAGLAAAELALAVEKHVLESG--S--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 277 ~~g~nAi~aaa~li~~L~~l~~~~~--~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
. +.||+.++++++.+|+++..... + ...++|+|.|++++++.|+||++|++++|+|..|.+ +.+++.+.++.+
T Consensus 200 ~-g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~--~~~~i~~~i~~~ 276 (395)
T TIGR03320 200 R-GDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGE--TWEYALEQIRNL 276 (395)
T ss_pred C-CCCHHHHHHHHHHHHHHHHHhhcCCcccCcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCC--CHHHHHHHHHHH
Confidence 5 69999999999999998754321 1 246899999997545899999999999999999998 788999888877
Q ss_pred HH
Q 048461 353 AL 354 (362)
Q Consensus 353 ~~ 354 (362)
+.
T Consensus 277 ~~ 278 (395)
T TIGR03320 277 PA 278 (395)
T ss_pred Hh
Confidence 54
No 20
>PRK08737 acetylornithine deacetylase; Provisional
Probab=99.96 E-value=1.5e-27 Score=236.25 Aligned_cols=232 Identities=22% Similarity=0.200 Sum_probs=169.6
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccC----cEEEeccCCCceeeeCCCCC
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVG----NIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~g----Nvia~~~~~~~~~~~G~~~~ 140 (362)
..++++++|++|++|+|.++++ +.+|.++++|++++|+ |+++++++.+ |+++ .. |
T Consensus 4 ~~~~~~~~l~~Lv~i~s~~~~~------~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~--------~~-g---- 62 (364)
T PRK08737 4 LLESTLDHLQALVSFDTRNPPR------AITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYA--------VR-G---- 62 (364)
T ss_pred cHHHHHHHHHHHhCCCCcCCCC------CCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEE--------Ec-C----
Confidence 3568999999999999987543 2356889999999996 9998877654 8888 53 3
Q ss_pred CceEEEEecccCCCCCC--------------------ccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcch
Q 048461 141 LASVATGSHIDAIPYSG--------------------KYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNIS 200 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG--------------------~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~ 200 (362)
.|+|+|+||+||||+++ ..|+|+|+++++.+++.+ .+++. +..+.|||...
T Consensus 63 ~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~~-----~~~v~----~~~~~dEE~g~ 133 (364)
T PRK08737 63 TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANAG-----DGDAA----FLFSSDEEAND 133 (364)
T ss_pred CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHcc-----CCCEE----EEEEcccccCc
Confidence 26899999999999742 237889999988887642 34444 34567765211
Q ss_pred --HHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCC
Q 048461 201 --FLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPN 278 (362)
Q Consensus 201 --~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~ 278 (362)
....+.+.+.+ .+. ++..+++...++.++||..|++|+++|+++|++..|+.
T Consensus 134 ~~g~~~~~~~~~~---------------~~~----------~iv~Ept~~~~~~~~kG~~~~~v~v~Gk~aHas~p~~~- 187 (364)
T PRK08737 134 PRCVAAFLARGIP---------------YEA----------VLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDP- 187 (364)
T ss_pred hhhHHHHHHhCCC---------------CCE----------EEEcCCCCceeEEecceeEEEEEEEEeeccccCCCccc-
Confidence 11222222221 111 12234455668899999999999999999999843344
Q ss_pred CCcHHHHHHHHHHHHHHhhhhh-----C-CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 279 RNDAGLAAAELALAVEKHVLES-----G-SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 279 g~nAi~aaa~li~~L~~l~~~~-----~-~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
++|||..|++++.++.+..... . ....++|+|.|++ |.+.|+||++|++++|+|..|.| +.+++.+.++.+
T Consensus 188 G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~vg~i~G-G~~~NvVP~~a~~~~d~R~~p~~--~~e~v~~~i~~~ 264 (364)
T PRK08737 188 SASALHQAMRWGGQALDHVESLAHARFGGLTGLRFNIGRVEG-GIKANMIAPAAELRFGFRPLPSM--DVDGLLATFAGF 264 (364)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCceEEeeEec-CCCCCcCCCceEEEEEeeeCCCC--CHHHHHHHHHHH
Confidence 6999999999998876543211 1 1245899999996 57999999999999999999999 788888888776
Q ss_pred HHH
Q 048461 353 ALT 355 (362)
Q Consensus 353 ~~~ 355 (362)
.+.
T Consensus 265 ~~~ 267 (364)
T PRK08737 265 AEP 267 (364)
T ss_pred HHH
Confidence 553
No 21
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.96 E-value=1.2e-27 Score=237.17 Aligned_cols=241 Identities=15% Similarity=0.165 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc-----ccCcEEEeccCCCceeeeCCCCCC
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED-----AVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d-----~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
.+++++|++|++|+|++. .++.++++||+++|+++|+++++. ..+|+++ +++++ ++
T Consensus 4 ~~~~~~l~~lv~i~S~s~---------~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a--------~~~~~--~~ 64 (385)
T PRK07522 4 MSSLDILERLVAFDTVSR---------DSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFA--------TIGPA--DR 64 (385)
T ss_pred hhHHHHHHHHhCCCCcCC---------CccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEE--------EeCCC--CC
Confidence 568999999999999742 123588999999999999988652 2369999 88653 25
Q ss_pred ceEEEEecccCCCCCC---------------------ccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcch
Q 048461 142 ASVATGSHIDAIPYSG---------------------KYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNIS 200 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG---------------------~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~ 200 (362)
|+|+|+|||||||+++ ..|+|+++++++.+++.|+...+.+++. +..+.|||.
T Consensus 65 ~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~i~----~~~~~dEE~-- 138 (385)
T PRK07522 65 GGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAPLRRPLH----LAFSYDEEV-- 138 (385)
T ss_pred CeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCCCCCCEE----EEEEecccc--
Confidence 8999999999999742 2367889999999999887544566555 344577652
Q ss_pred HHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCC
Q 048461 201 FLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRN 280 (362)
Q Consensus 201 ~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~ 280 (362)
|..|...++..........+.. +..+++...++.+++|..+++|+++|+++|+| .|.. +.
T Consensus 139 --------g~~G~~~l~~~~~~~~~~~d~~----------i~~ep~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~-g~ 198 (385)
T PRK07522 139 --------GCLGVPSMIARLPERGVKPAGC----------IVGEPTSMRPVVGHKGKAAYRCTVRGRAAHSS-LAPQ-GV 198 (385)
T ss_pred --------CCccHHHHHHHhhhcCCCCCEE----------EEccCCCCeeeeeecceEEEEEEEEeeccccC-CCcc-Cc
Confidence 1111111111100000011111 11233345688899999999999999999998 5654 59
Q ss_pred cHHHHHHHHHHHHHHhhhhhC---C-------CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHH
Q 048461 281 DAGLAAAELALAVEKHVLESG---S-------IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVK 350 (362)
Q Consensus 281 nAi~aaa~li~~L~~l~~~~~---~-------~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~ 350 (362)
||+..|++++.+|+++..+.. + +.+++|+|.|++ |.+.|+||++|++++|+|..|.+ +.+++.+.++
T Consensus 199 nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~g-G~~~nviP~~a~~~~diR~~~~~--~~~~i~~~i~ 275 (385)
T PRK07522 199 NAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYSTLQTGTIQG-GTALNIVPAECEFDFEFRNLPGD--DPEAILARIR 275 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCcceeEEeeeec-CccccccCCceEEEEEEccCCCC--CHHHHHHHHH
Confidence 999999999999998753321 0 126899999996 67999999999999999999999 7899998888
Q ss_pred HHHHH
Q 048461 351 VLALT 355 (362)
Q Consensus 351 ~l~~~ 355 (362)
.+++.
T Consensus 276 ~~i~~ 280 (385)
T PRK07522 276 AYAEA 280 (385)
T ss_pred HHHHh
Confidence 87765
No 22
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.96 E-value=2.6e-27 Score=234.51 Aligned_cols=240 Identities=20% Similarity=0.188 Sum_probs=178.7
Q ss_pred HHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc----cC----cEEEeccCCCceeeeCCCCCCc
Q 048461 71 KQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA----VG----NIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 71 ~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~----~g----Nvia~~~~~~~~~~~G~~~~~p 142 (362)
++|++|++|+|.+++ +.+|.++++||+++|+++|+++++.+ .+ |+++ .+.|.+ ++|
T Consensus 2 ~~l~~lv~i~s~~~~-------~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~--------~~~g~~-~~~ 65 (375)
T TIGR01910 2 ELLKDLISIPSVNPP-------GGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVV--------KEPGNG-NEK 65 (375)
T ss_pred hhHHhhhcCCCCCCC-------CcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEE--------eccCCC-CCC
Confidence 678999999997532 46899999999999999999887532 13 4676 556643 358
Q ss_pred eEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCC-
Q 048461 143 SVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGK- 197 (362)
Q Consensus 143 ~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~- 197 (362)
+|+|.+||||||++ |..|+|+|+++++.+++.|++.. +.+.+. +..+.||+
T Consensus 66 ~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~----~~~~~~EE~ 141 (375)
T TIGR01910 66 SLIFNGHYDVVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNII----LQSVVDEES 141 (375)
T ss_pred EEEEecccccccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEE----EEEEcCccc
Confidence 99999999999985 34588899999999999987532 455555 33456765
Q ss_pred cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 198 NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 198 G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
|......+.+.+.. + +.+..+ +.++++ ...++.+++|..+++|+++|+++|+| .|+.
T Consensus 142 g~~G~~~~~~~~~~-----------~--~~d~~i--------~~~~~~-~~~v~~~~~G~~~~~i~~~G~~~Hs~-~p~~ 198 (375)
T TIGR01910 142 GEAGTLYLLQRGYF-----------K--DADGVL--------IPEPSG-GDNIVIGHKGSIWFKLRVKGKQAHAS-FPQF 198 (375)
T ss_pred CchhHHHHHHcCCC-----------C--CCCEEE--------ECCCCC-CCceEEEecceEEEEEEEeeeecccC-CCCc
Confidence 22222222222211 0 112221 223222 45688899999999999999999998 6875
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhC--------CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHH
Q 048461 278 NRNDAGLAAAELALAVEKHVLESG--------SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGV 349 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~~~--------~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi 349 (362)
+.|||.+|++++.+|+++..... ...+++|++.|++ |+..|+||++|++++|+|..|.+ +.+++.+.+
T Consensus 199 -g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~i~~i~g-G~~~nviP~~~~~~~diR~~~~~--~~~~~~~~i 274 (375)
T TIGR01910 199 -GVNAIMKLAKLITELNELEEHIYARNSYGFIPGPITFNPGVIKG-GDWVNSVPDYCEFSIDVRIIPEE--NLDEVKQII 274 (375)
T ss_pred -chhHHHHHHHHHHHHHHHHHHhhhcccccccCCCccccceeEEC-CCCcCcCCCEEEEEEEeeeCCCC--CHHHHHHHH
Confidence 69999999999999998754321 1247899999996 68999999999999999999998 889999999
Q ss_pred HHHHHHHH
Q 048461 350 KVLALTLA 357 (362)
Q Consensus 350 ~~l~~~l~ 357 (362)
+.+++...
T Consensus 275 ~~~~~~~~ 282 (375)
T TIGR01910 275 EDVVKALS 282 (375)
T ss_pred HHHHHHHh
Confidence 99887653
No 23
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=99.96 E-value=3.1e-27 Score=235.85 Aligned_cols=236 Identities=17% Similarity=0.132 Sum_probs=176.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCCCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
..+++++++++|++|||+ |.+|.++++||.++|+++|++ ++.+..+|+++ ++ |.+ .|+
T Consensus 11 ~~~~~~~~l~~Lv~ips~----------s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~--------~~-g~~--~~~ 69 (395)
T TIGR03526 11 YRGDMIRFLRDLVAIPSE----------SGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLG--------YI-GHG--PKL 69 (395)
T ss_pred HHHHHHHHHHHHhcCCCC----------CCchHHHHHHHHHHHHHcCCceEEEcCCCcEEE--------Ee-CCC--CCE
Confidence 457899999999999996 356889999999999999997 56777789999 77 432 378
Q ss_pred EEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhccc--ccccchhhhhcccccCCc-
Q 048461 144 VATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRLL--AGIESLAKDLTSIVDGKN- 198 (362)
Q Consensus 144 Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~~--~g~~~~~e~l~~~~D~~G- 198 (362)
|+|.+|+||||++. ..|+|+|+++++.|++.|+.... .+++. +..+.||++
T Consensus 70 l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~----~~~~~dEE~~ 145 (395)
T TIGR03526 70 IAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLL----VTGTVQEEDC 145 (395)
T ss_pred EEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEE----EEEecccccC
Confidence 99999999999742 24678999999999998874332 22332 334456652
Q ss_pred chH-HH-HHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCC
Q 048461 199 ISF-LD-AARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLM 276 (362)
Q Consensus 199 ~~~-~e-~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~ 276 (362)
... .. .+++.++++ +..+ +.| ++...++.+++|..+++|+++|+++|++ .|+
T Consensus 146 ~g~~~~~~~~~~~~~~---------------d~~i--------~~e--p~~~~i~~g~~G~~~~~v~v~G~~~Hs~-~p~ 199 (395)
T TIGR03526 146 DGLCWQYIIEEDKIKP---------------EFVV--------ITE--PTDMNIYRGQRGRMEIKVTVKGVSCHGS-APE 199 (395)
T ss_pred CcHhHHHHHhccCCCC---------------CEEE--------ecC--CCCceEEEEcceEEEEEEEEecCCCccC-CCC
Confidence 111 11 121111111 1111 223 3345688899999999999999999997 688
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhh--CC--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 277 PNRNDAGLAAAELALAVEKHVLES--GS--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 277 ~~g~nAi~aaa~li~~L~~l~~~~--~~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
. +.|||.+|++++.+|+++.... .+ ...++|+|.|++++++.|+||++|++++|+|..|.+ +.+++.+.++.+
T Consensus 200 ~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~--~~~~~~~~i~~~ 276 (395)
T TIGR03526 200 R-GDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGE--TWEYALEQIRNL 276 (395)
T ss_pred C-CCCHHHHHHHHHHHHHHhhhhhcCCcccCccceeeeeeecCCCCCCccCCeEEEEEEEecCCCC--CHHHHHHHHHHH
Confidence 5 6999999999999999875432 11 246899999997545899999999999999999998 789999988887
Q ss_pred HH
Q 048461 353 AL 354 (362)
Q Consensus 353 ~~ 354 (362)
++
T Consensus 277 ~~ 278 (395)
T TIGR03526 277 PA 278 (395)
T ss_pred HH
Confidence 65
No 24
>PRK13004 peptidase; Reviewed
Probab=99.96 E-value=3.5e-27 Score=235.84 Aligned_cols=237 Identities=16% Similarity=0.132 Sum_probs=179.2
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCCCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
..+.++++++|.+|++|+++ |++|.++++||.++|+++|++ +++|..+|+++ ++++. .
T Consensus 11 ~~~~~~~~~~l~~lv~ips~----------s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a--------~~~~~---~ 69 (399)
T PRK13004 11 EKYKADMTRFLRDLIRIPSE----------SGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLG--------YIGHG---K 69 (399)
T ss_pred HHHHHHHHHHHHHHhcCCCC----------CCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEE--------EECCC---C
Confidence 34568899999999999986 457889999999999999997 55677789999 88653 2
Q ss_pred ceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCC
Q 048461 142 ASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~ 197 (362)
|+|+|.+|+||||+++ ..|+|+|+++++.+++.|+... +.+++. +..+.||+
T Consensus 70 ~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~----~~~~~~EE 145 (399)
T PRK13004 70 KLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLY----VTGTVQEE 145 (399)
T ss_pred cEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEE----EEEEcccc
Confidence 7999999999999852 1267899999999999997543 345554 33456665
Q ss_pred c---chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcC
Q 048461 198 N---ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAV 274 (362)
Q Consensus 198 G---~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~ 274 (362)
. ......+++.+... +..+ +.| +....++.+++|..+++|+++|+++|+| .
T Consensus 146 ~~~g~~~~~~~~~~~~~~---------------d~~i--------~~e--~~~~~i~~~~~G~~~~~v~v~G~~~Ha~-~ 199 (399)
T PRK13004 146 DCDGLCWRYIIEEDKIKP---------------DFVV--------ITE--PTDLNIYRGQRGRMEIRVETKGVSCHGS-A 199 (399)
T ss_pred cCcchhHHHHHHhcCCCC---------------CEEE--------Ecc--CCCCceEEecceEEEEEEEEeccccccC-C
Confidence 2 11112222212111 1111 122 2345688889999999999999999997 7
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhhh--C--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHH
Q 048461 275 LMPNRNDAGLAAAELALAVEKHVLES--G--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVK 350 (362)
Q Consensus 275 P~~~g~nAi~aaa~li~~L~~l~~~~--~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~ 350 (362)
|+. +.||+.++++++.+|+++.... . ....++|++.|.+++.+.|+||++|++++|+|..|.+ +.+++.+.++
T Consensus 200 p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~--~~~~v~~~i~ 276 (399)
T PRK13004 200 PER-GDNAIYKMAPILNELEELNPNLKEDPFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGE--TWESVLAEIR 276 (399)
T ss_pred CCC-CCCHHHHHHHHHHHHHhhccccccCCcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCC--CHHHHHHHHH
Confidence 885 6999999999999999875431 1 1245789999986545999999999999999999999 7899998888
Q ss_pred HHH
Q 048461 351 VLA 353 (362)
Q Consensus 351 ~l~ 353 (362)
.+.
T Consensus 277 ~~~ 279 (399)
T PRK13004 277 ALP 279 (399)
T ss_pred HHH
Confidence 873
No 25
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.96 E-value=2.8e-27 Score=234.57 Aligned_cols=245 Identities=16% Similarity=0.065 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc------CcEEEeccCCCceeeeCCCC
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV------GNIYGEISSSSRGVWIGNEA 139 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~------gNvia~~~~~~~~~~~G~~~ 139 (362)
.++++++|++|++|+|.++.. ..+...+.++++||+++|+++|++++.+++ .|+++ ++ |..
T Consensus 4 ~~~~i~~l~~lv~i~s~s~~e---~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia--------~~-g~~- 70 (383)
T PRK05111 4 LPSFIEMYRALIATPSISATD---PALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLA--------SL-GSG- 70 (383)
T ss_pred chHHHHHHHHHhCcCCcCCCC---cccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEE--------Ee-CCC-
Confidence 458999999999999975321 112234678999999999999998876533 58999 88 432
Q ss_pred CCceEEEEecccCCCCCC---------------------ccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCc
Q 048461 140 ELASVATGSHIDAIPYSG---------------------KYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKN 198 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp~gG---------------------~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G 198 (362)
.++|+|.||+||||++. ..|+|+++++++.+++.|+...+.+++. +..+.||+.
T Consensus 71 -~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~i~----~~~~~~EE~ 145 (383)
T PRK05111 71 -EGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLTKLKKPLY----ILATADEET 145 (383)
T ss_pred -CCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhcCCCCCeE----EEEEecccc
Confidence 25799999999998641 2367889999999999987544556655 344577652
Q ss_pred -chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 199 -ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 199 -~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
......+-+.+. + ..+..+ + .+++...++.+++|..+++|+++|+++|++ .|+.
T Consensus 146 g~~G~~~~~~~~~-----------~---~~d~~i--------~--~ep~~~~~~~~~~G~~~~~i~v~G~~~H~~-~p~~ 200 (383)
T PRK05111 146 SMAGARAFAEATA-----------I---RPDCAI--------I--GEPTSLKPVRAHKGHMSEAIRITGQSGHSS-DPAL 200 (383)
T ss_pred CcccHHHHHhcCC-----------C---CCCEEE--------E--cCCCCCceeecccceEEEEEEEEeechhcc-CCcc
Confidence 111122211111 0 011111 1 223334467789999999999999999997 7876
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhh-----CC----CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHH
Q 048461 278 NRNDAGLAAAELALAVEKHVLES-----GS----IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENG 348 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~~-----~~----~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~g 348 (362)
++|||..+++++.+++++.... .+ ..+++|+|.|++ |...|+||++|++++|+|..|.+ +.+++.+.
T Consensus 201 -g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~i~~i~g-g~~~NvVP~~~~~~~diR~~p~~--~~~~v~~~ 276 (383)
T PRK05111 201 -GVNAIELMHDVIGELLQLRDELQERYHNPAFTVPYPTLNLGHIHG-GDAPNRICGCCELHFDIRPLPGM--TLEDLRGL 276 (383)
T ss_pred -CcCHHHHHHHHHHHHHHHHHHHhccCCCccCCCCCCceeEeeeec-CCcCcccCCceEEEEEEecCCCC--CHHHHHHH
Confidence 5999999999999998865321 11 246899999996 57999999999999999999999 88999988
Q ss_pred HHHHHHHHH
Q 048461 349 VKVLALTLA 357 (362)
Q Consensus 349 i~~l~~~l~ 357 (362)
++..++.+.
T Consensus 277 i~~~i~~~~ 285 (383)
T PRK05111 277 LREALAPVS 285 (383)
T ss_pred HHHHHHHHH
Confidence 887776543
No 26
>PLN02693 IAA-amino acid hydrolase
Probab=99.96 E-value=6.3e-27 Score=237.15 Aligned_cols=241 Identities=19% Similarity=0.178 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE-cccCcEEEeccCCCceeeeCCCCCCceE
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE-DAVGNIYGEISSSSRGVWIGNEAELASV 144 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~-d~~gNvia~~~~~~~~~~~G~~~~~p~I 144 (362)
.++++++.++|.++|.. |.+|.++++||+++|+++|+++++ +...|++| ++.+ + ++|+|
T Consensus 46 ~~~~~~~r~~lh~~PE~----------s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via--------~~g~-~-~g~~i 105 (437)
T PLN02693 46 FDWMVRIRRKIHENPEL----------GYEEFETSKLIRSELDLIGIKYRYPVAITGIIG--------YIGT-G-EPPFV 105 (437)
T ss_pred HHHHHHHHHHHHhCCCC----------CCchHHHHHHHHHHHHHCCCeeEecCCCcEEEE--------EECC-C-CCCEE
Confidence 36688999999998874 789999999999999999998764 34579999 8842 2 35899
Q ss_pred EEEecccCCCCCCc---------------cccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcchHHHHHHH
Q 048461 145 ATGSHIDAIPYSGK---------------YDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAARS 207 (362)
Q Consensus 145 ll~sHlDTVp~gG~---------------~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~ee 207 (362)
+|+|||||||.++. .|.++++++++.+++.|+.. .+.|++. +..++|||+......+-+
T Consensus 106 ~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~----~if~pdEE~~~Ga~~~i~ 181 (437)
T PLN02693 106 ALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVV----LIFQPAEEGLSGAKKMRE 181 (437)
T ss_pred EEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEE----EEEEEcccchhhHHHHHH
Confidence 99999999997531 24567888889999998743 2566665 445788875323333334
Q ss_pred cCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEE-----eeecceEEEEEEEeeCCCCCcCCCCCCCcH
Q 048461 208 AGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVT-----AIAAPASIKADFEGTGGHAGAVLMPNRNDA 282 (362)
Q Consensus 208 ~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~-----~~kG~~~~~I~v~G~~aHAg~~P~~~g~nA 282 (362)
.|.. ++.++++..|.+... +.|.+. .++|..+++|+++|+++|++ .|+. |+||
T Consensus 182 ~g~~-------------~~~~~iig~h~~p~~-------~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa-~P~~-G~nA 239 (437)
T PLN02693 182 EGAL-------------KNVEAIFGIHLSPRT-------PFGKAASRAGSFMAGAGVFEAVITGKGGHAA-IPQH-TIDP 239 (437)
T ss_pred CCCC-------------CCCCEEEEEecCCCC-------CCeeEEeccCcccccceEEEEEEEcccccCC-CCCC-CcCH
Confidence 4432 123566777776432 112111 24799999999999999997 6986 6999
Q ss_pred HHHHHHHHHHHHHhhhhhC--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 283 GLAAAELALAVEKHVLESG--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 283 i~aaa~li~~L~~l~~~~~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
|.++++++.+|+++..+.. ..+.++|||.|++ |.++|+||++|++++|+|..|.+ +.+...++.+++.+.
T Consensus 240 I~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~G-G~~~NvVPd~a~~~~diR~~~~~----~~i~~~i~~i~~~~a 311 (437)
T PLN02693 240 VVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFTGF----TQLQQRIKEIITKQA 311 (437)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEc-CCCCceECCeEEEEEEEecCCHH----HHHHHHHHHHHHHHH
Confidence 9999999999999854321 1457999999996 68999999999999999999974 567777777776653
No 27
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.96 E-value=5e-27 Score=230.71 Aligned_cols=236 Identities=19% Similarity=0.136 Sum_probs=174.9
Q ss_pred HHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc------cCcEEEeccCCCceeeeCCCCCCceE
Q 048461 71 KQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA------VGNIYGEISSSSRGVWIGNEAELASV 144 (362)
Q Consensus 71 ~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~------~gNvia~~~~~~~~~~~G~~~~~p~I 144 (362)
++|++|++|+|+++ .++.++++||+++|+++|+++++++ .+|+++ +++++ +.|+|
T Consensus 1 ~~l~~lv~i~S~s~---------~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~--------~~~~~--~~~~i 61 (364)
T TIGR01892 1 EILTKLVAFDSTSF---------RPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVA--------VIGPS--GAGGL 61 (364)
T ss_pred ChHHHhhCcCCcCC---------ccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEE--------EecCC--CCCeE
Confidence 36899999999753 1347899999999999999988653 369999 88553 24789
Q ss_pred EEEecccCCCCCC---------------------ccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcchHHH
Q 048461 145 ATGSHIDAIPYSG---------------------KYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNISFLD 203 (362)
Q Consensus 145 ll~sHlDTVp~gG---------------------~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~~~e 203 (362)
+|.||+||||++. ..|+|++++++|.+++.|++..+.+++. +..+.||+.
T Consensus 62 ~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~v~----~~~~~~EE~----- 132 (364)
T TIGR01892 62 ALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQLKKPLH----LALTADEEV----- 132 (364)
T ss_pred EEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcCcCCCEE----EEEEecccc-----
Confidence 9999999999741 2378889999999999997545566655 344577652
Q ss_pred HHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHH
Q 048461 204 AARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAG 283 (362)
Q Consensus 204 ~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi 283 (362)
|..+...++..... ..+.. .+. ++....++.+++|..+++|+++|+++|++ .|+. ++|||
T Consensus 133 -----g~~G~~~~~~~~~~---~~d~~--------i~~--ep~~~~~~~~~~G~~~~~v~v~G~~~Hs~-~p~~-g~nAi 192 (364)
T TIGR01892 133 -----GCTGAPKMIEAGAG---RPRHA--------IIG--EPTRLIPVRAHKGYASAEVTVRGRSGHSS-YPDS-GVNAI 192 (364)
T ss_pred -----CCcCHHHHHHhcCC---CCCEE--------EEC--CCCCceeEEeeceEEEEEEEEEccccccc-CCcc-CcCHH
Confidence 21221112111100 01111 112 33334466788999999999999999997 7876 69999
Q ss_pred HHHHHHHHHHHHhhhhhC---------CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 284 LAAAELALAVEKHVLESG---------SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 284 ~aaa~li~~L~~l~~~~~---------~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
..+++++.+|+++..... ...+++|++.|++ |.+.|+||++|++.+|+|..|.+ +.+++.+.++.+++
T Consensus 193 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~i~g-g~~~nviP~~~~~~~diR~~p~~--~~~~v~~~i~~~~~ 269 (364)
T TIGR01892 193 FRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGVIQG-GKAVNIIPGACEFVFEWRPIPGM--DPEELLQLLETIAQ 269 (364)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEeeeec-CCCCcccCCeEEEEEEeecCCCC--CHHHHHHHHHHHHH
Confidence 999999999998753211 0146899999996 57999999999999999999998 88999999999887
Q ss_pred HHH
Q 048461 355 TLA 357 (362)
Q Consensus 355 ~l~ 357 (362)
.+.
T Consensus 270 ~~~ 272 (364)
T TIGR01892 270 ALV 272 (364)
T ss_pred HHH
Confidence 653
No 28
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.96 E-value=7.7e-27 Score=230.65 Aligned_cols=239 Identities=15% Similarity=0.135 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE---cccCcEEEeccCCCceeeeCCCCCCce
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE---DAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~---d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
.+++++|++|++|+|.+ ++|.++++||.++|+++|++++. +..+|+++ ++ |. ++|+
T Consensus 2 ~~~~~~l~~Lv~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~--------~~-g~--~~~~ 60 (375)
T PRK13009 2 SDVLELAQDLIRRPSVT----------PDDAGCQDLLAERLEALGFTCERMDFGDVKNLWA--------RR-GT--EGPH 60 (375)
T ss_pred chHHHHHHHHhCCCCCC----------CchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEE--------Ee-cC--CCCE
Confidence 36889999999999963 45788999999999999998874 34579999 87 53 2589
Q ss_pred EEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc
Q 048461 144 VATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI 199 (362)
Q Consensus 144 Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~ 199 (362)
|+|.+|+||||+++ ..|+|+|+++++.+++.|++.. +.+++. +..+.||++.
T Consensus 61 i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~----~~~~~~EE~~ 136 (375)
T PRK13009 61 LCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIA----FLITSDEEGP 136 (375)
T ss_pred EEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEE----EEEEeecccc
Confidence 99999999999853 1278889999999999887432 455555 3446777631
Q ss_pred ------hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCc
Q 048461 200 ------SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGA 273 (362)
Q Consensus 200 ------~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~ 273 (362)
.+.+.+.+.+.. .+..+- .++.. .......++.+++|..+++|+++|+++|++
T Consensus 137 ~~~G~~~~~~~~~~~~~~---------------~d~~i~--~ep~~---~~~~~~~i~~g~~g~~~~~i~v~G~~~Ha~- 195 (375)
T PRK13009 137 AINGTVKVLEWLKARGEK---------------IDYCIV--GEPTS---TERLGDVIKNGRRGSLTGKLTVKGVQGHVA- 195 (375)
T ss_pred cccCHHHHHHHHHHcCcC---------------CCEEEE--cCCCc---ccCCCCeEEEecceEEEEEEEEEecCcccC-
Confidence 112222222221 111111 11100 001112467889999999999999999997
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhhhhC---CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHH
Q 048461 274 VLMPNRNDAGLAAAELALAVEKHVLESG---SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVK 350 (362)
Q Consensus 274 ~P~~~g~nAi~aaa~li~~L~~l~~~~~---~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~ 350 (362)
.|+. +.||+..+++++.+|++...+.. ..+.++|++.|++|+.+.|+||++|++.+|+|..|.+ +.+++.+-++
T Consensus 196 ~p~~-g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~G~~~~nvip~~~~~~~diR~~~~~--~~e~i~~~i~ 272 (375)
T PRK13009 196 YPHL-ADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDAGTGATNVIPGELEAQFNFRFSTEH--TAESLKARVE 272 (375)
T ss_pred CCCc-ccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEecCCCCCcccCCcEEEEEEEecCCCC--CHHHHHHHHH
Confidence 6876 69999999999999987643211 1346899999997544889999999999999999998 7899988888
Q ss_pred HHHH
Q 048461 351 VLAL 354 (362)
Q Consensus 351 ~l~~ 354 (362)
.+++
T Consensus 273 ~~~~ 276 (375)
T PRK13009 273 AILD 276 (375)
T ss_pred HHHH
Confidence 7765
No 29
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.96 E-value=2.3e-27 Score=242.70 Aligned_cols=237 Identities=17% Similarity=0.153 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCC--CCCce
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNE--AELAS 143 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~--~~~p~ 143 (362)
.++++++|++|++|+++ |++|.++++||+++|+++|+++++|+.+|+++ +++|+. ++.|+
T Consensus 3 ~~~~~~~l~~l~~i~s~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~~--------~~~~~~g~~~~~~ 64 (477)
T TIGR01893 3 PSRVFKYFEEISKIPRP----------SKNEKEVSNFIVNWAKKLGLEVKQDEVGNVLI--------RKPATPGYENHPP 64 (477)
T ss_pred HHHHHHHHHHHHcCCCC----------CccHHHHHHHHHHHHHHcCCeEEEeCCCeEEE--------EEcCCCCCCCCCe
Confidence 58899999999999864 46788999999999999999999999999999 887642 23588
Q ss_pred EEEEecccCCCCCCc----------------------------cccHHHHHHHHHHHHHhhhcccccccchhhhhccccc
Q 048461 144 VATGSHIDAIPYSGK----------------------------YDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVD 195 (362)
Q Consensus 144 Ill~sHlDTVp~gG~----------------------------~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D 195 (362)
|+|.|||||||++|. .|++.|+++++++++. .....+++. +..+.|
T Consensus 65 l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~--~~~~~~~i~----~~~~~d 138 (477)
T TIGR01893 65 IVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED--NNLKHPPLE----LLFTVD 138 (477)
T ss_pred EEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc--CCCCCCCEE----EEEEec
Confidence 999999999998752 1999999988887764 222234444 344678
Q ss_pred CCcc-hHHHHHHHcCCCCccc-----------cchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEE
Q 048461 196 GKNI-SFLDAARSAGYAKEHN-----------DLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKAD 263 (362)
Q Consensus 196 ~~G~-~~~e~~ee~G~~~~~~-----------~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~ 263 (362)
||+. .....+.+.....+.. .+.+. ....+..++++|++| .+||..||+|+
T Consensus 139 EE~g~~Gs~~l~~~~~~~~~~~~~d~~~~~~~~~g~~--~~~~~~~~~e~~~e~---------------~~kG~~~~~i~ 201 (477)
T TIGR01893 139 EETGMDGALGLDENWLSGKILINIDSEEEGEFIVGCA--GGRNVDITFPVKYEK---------------FTKNEEGYQIS 201 (477)
T ss_pred cccCchhhhhcChhhcCCcEEEEecCCCCCeEEEECC--CCeeEEEEEEEEEEe---------------cCCCceEEEEE
Confidence 7642 1122221111111000 00000 000123344444443 14899999999
Q ss_pred EEe-eCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCH
Q 048461 264 FEG-TGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASC 342 (362)
Q Consensus 264 v~G-~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ 342 (362)
++| +++|+|++||.+|.||+.+|++++.++++.. .++++.+.+ |++.|+||++|++++|+|+...+
T Consensus 202 ~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~--------~~~v~~~~g-g~~~N~ip~~~~~~~diR~~~~~---- 268 (477)
T TIGR01893 202 LKGLKGGHSGADIHKGRANANKLMARVLNELKENL--------NFRLSDIKG-GSKRNAIPREAKALIAIDENDVK---- 268 (477)
T ss_pred EeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC--------CeEEEEEeC-CCcccccCCceEEEEEEChhHHH----
Confidence 999 9999998899877899999999999988642 268899986 68999999999999999875444
Q ss_pred HHHHHHHHHHHHHHH
Q 048461 343 EDMENGVKVLALTLA 357 (362)
Q Consensus 343 ed~~~gi~~l~~~l~ 357 (362)
.+.+-++.+.+.+.
T Consensus 269 -~l~~~~~~~~~~~~ 282 (477)
T TIGR01893 269 -LLENLVKNFQSKFK 282 (477)
T ss_pred -HHHHHHHHHHHHHH
Confidence 44444444444433
No 30
>PLN02280 IAA-amino acid hydrolase
Probab=99.95 E-value=1.7e-26 Score=236.13 Aligned_cols=252 Identities=17% Similarity=0.124 Sum_probs=184.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc-ccCcEEEeccCCCceeeeCCCCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED-AVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d-~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
..++++++|.+|+++...+|+ ++++|.++++||+++|+++|+++++. ...|+++ ++ |+.+ +|+
T Consensus 91 ~~~~~~~~l~~l~r~lh~~PE------ls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva--------~~-g~~~-~~~ 154 (478)
T PLN02280 91 YQPDTVAWLKSVRRKIHENPE------LAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRA--------WI-GTGG-PPF 154 (478)
T ss_pred hhHHHHHHHHHHHHHHhcCCC------CCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEE--------EE-CCCC-CCE
Confidence 457788999999998876543 46899999999999999999988763 3458999 88 5332 489
Q ss_pred EEEEecccCCCCCCc--c-------------ccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcchHHHHHH
Q 048461 144 VATGSHIDAIPYSGK--Y-------------DGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAAR 206 (362)
Q Consensus 144 Ill~sHlDTVp~gG~--~-------------Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~e 206 (362)
|+|+|||||||.++. | +.++++++++.+++.|++. .+.|++. +..+.|||.......+-
T Consensus 155 I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~----~if~pdEE~g~Ga~~li 230 (478)
T PLN02280 155 VAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVV----LLFQPAEEAGNGAKRMI 230 (478)
T ss_pred EEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEE----EEecccccccchHHHHH
Confidence 999999999997532 1 2335777778888888643 2567766 44568876322223333
Q ss_pred HcCCCCccccchhhhhccCCceeEEEeecccCcccccCCc-eeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHH
Q 048461 207 SAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGT-SIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLA 285 (362)
Q Consensus 207 e~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~-~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~a 285 (362)
+.|. ++ +++.++.+|+..+ ++.+. ........+|..|++|+++|+++|++ .|+. |+|||.+
T Consensus 231 ~~g~-----------~~--~~d~~~~~h~~~~---~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas-~P~~-G~NAI~~ 292 (478)
T PLN02280 231 GDGA-----------LD--DVEAIFAVHVSHE---HPTAVIGSRPGPLLAGCGFFRAVISGKKGRAG-SPHH-SVDLILA 292 (478)
T ss_pred HCCC-----------Cc--CCCEEEEEecCCC---CCCceeEecccccccceeEEEEEEECcchhcC-Cccc-CcCHHHH
Confidence 3332 11 3467788887321 12111 00111235799999999999999987 7986 6999999
Q ss_pred HHHHHHHHHHhhhhhC-C-CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 286 AAELALAVEKHVLESG-S-IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 286 aa~li~~L~~l~~~~~-~-~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
|++++.+++++..+.. + .+.++|+|.|++ |.++|+||++|++++|+|..|+| +.+++.+.++.+++.+.
T Consensus 293 aa~li~~l~~l~~r~~~~~~~~tvnvg~I~G-G~~~NvIPd~~~l~~diR~~~~e--~~e~l~~~I~~~~~~~a 363 (478)
T PLN02280 293 ASAAVISLQGIVSREANPLDSQVVSVTTMDG-GNNLDMIPDTVVLGGTFRAFSNT--SFYQLLKRIQEVIVEQA 363 (478)
T ss_pred HHHHHHHHHHHHhcccCCCCCcEEEEEEEEc-cCCCCEeCCEEEEEEEEecCCHH--HHHHHHHHHHHHHHHHH
Confidence 9999999998864321 1 357899999996 68999999999999999999999 78999999998887654
No 31
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.95 E-value=6.7e-27 Score=228.37 Aligned_cols=233 Identities=15% Similarity=0.148 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
+++++++++|++||++ |++|.++++||.++|+++|++++.+..+++.. .+.+ ++|+|+|
T Consensus 2 ~~~~~~~~~lv~ips~----------s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~--------~~~~---~~~~i~l 60 (347)
T PRK08652 2 ERAKELLKQLVKIPSP----------SGQEDEIALHIMEFLESLGYDVHIESDGEVIN--------IVVN---SKAELFV 60 (347)
T ss_pred hhHHHHHHHHhcCCCC----------CCchHHHHHHHHHHHHHcCCEEEEEecCceeE--------EEcC---CCCEEEE
Confidence 6789999999999996 45789999999999999999998876665444 3332 2489999
Q ss_pred EecccCCCCC-------------CccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcchHHHHHHHcCCCCc
Q 048461 147 GSHIDAIPYS-------------GKYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNISFLDAARSAGYAKE 213 (362)
Q Consensus 147 ~sHlDTVp~g-------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~ 213 (362)
.||+||||.+ |..|+|+|+++++.+++.|+.....+++. +..+.||+. |..+.
T Consensus 61 ~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~v~----~~~~~dEE~----------g~~G~ 126 (347)
T PRK08652 61 EVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKEFEDLNVG----IAFVSDEEE----------GGRGS 126 (347)
T ss_pred EccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhcccCCCEE----EEEecCccc----------CChhH
Confidence 9999999973 44689999999999999887433344454 334577652 21222
Q ss_pred cccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHH
Q 048461 214 HNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAV 293 (362)
Q Consensus 214 ~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L 293 (362)
..++... ..+ +.++. +++ ...++.+++|..+++|+++|+++|++ .|+. +.||+.++++++.+|
T Consensus 127 ~~~~~~~-----~~d--~~i~~------ep~--~~~i~~~~~g~~~~~i~~~G~~~H~s-~p~~-g~nAi~~~a~~i~~l 189 (347)
T PRK08652 127 ALFAERY-----RPK--MAIVL------EPT--DLKVAIAHYGNLEAYVEVKGKPSHGA-CPES-GVNAIEKAFEMLEKL 189 (347)
T ss_pred HHHHHhc-----CCC--EEEEe------cCC--CCceeeecccEEEEEEEEEeeecccC-CCCc-CcCHHHHHHHHHHHH
Confidence 1122110 011 22333 332 33577889999999999999999976 7986 699999999999999
Q ss_pred HHhhhhhCC-CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 294 EKHVLESGS-IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 294 ~~l~~~~~~-~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
+++...... -..+++++.|++ |.+.|+||++|++++|+|..|.+ +.+++.+.++.++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~i~g-g~~~nviP~~~~~~~diR~~~~~--~~~~v~~~i~~~~~ 248 (347)
T PRK08652 190 KELLKALGKYFDPHIGIQEIIG-GSPEYSIPALCRLRLDARIPPEV--EVEDVLDEIDPILD 248 (347)
T ss_pred HHHHHhhhcccCCCCcceeeec-CCCCCccCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHH
Confidence 987643211 123567888995 57899999999999999999999 88999988887764
No 32
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.95 E-value=1.5e-26 Score=227.25 Aligned_cols=231 Identities=17% Similarity=0.125 Sum_probs=174.8
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCc
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
.+-.++++++|++|++|+|++ ++|.++++|+.++|+++|++++.+..+|+++ ++++ . +|
T Consensus 2 ~~~~~~~~~~l~~Lv~i~s~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~n~i~--------~~~~-~--~~ 60 (348)
T PRK04443 2 TISALEARELLKGLVEIPSPS----------GEEAAAAEFLVEFMESHGREAWVDEAGNARG--------PAGD-G--PP 60 (348)
T ss_pred ccchHHHHHHHHHHHcCCCCC----------CChHHHHHHHHHHHHHcCCEEEEcCCCcEEE--------EcCC-C--CC
Confidence 455688999999999999963 4688999999999999999999998899999 8743 2 48
Q ss_pred eEEEEecccCCCCC-------------CccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcch--HHHHHHH
Q 048461 143 SVATGSHIDAIPYS-------------GKYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNIS--FLDAARS 207 (362)
Q Consensus 143 ~Ill~sHlDTVp~g-------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~--~~e~~ee 207 (362)
+|+|.||+||||.. |..|+|+|+++++.|++.| ...+.+++. +..+.||+... ....+.+
T Consensus 61 ~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~~~~~~~i~----~~~~~dEE~g~~~~~~~l~~ 135 (348)
T PRK04443 61 LVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-EALVRARVS----FVGAVEEEAPSSGGARLVAD 135 (348)
T ss_pred EEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-cccCCCCEE----EEEEcccccCChhHHHHHHh
Confidence 99999999999852 3458999999999999988 334556665 34457765311 1122211
Q ss_pred cCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHH
Q 048461 208 AGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAA 287 (362)
Q Consensus 208 ~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa 287 (362)
+.. .+.. .+.|+++. ..++.+++|..|++|+++|+++||| .| +.||+..|+
T Consensus 136 -~~~---------------~d~~--------iv~Ept~~-~~i~~~~kG~~~~~l~~~G~~~Hss-~~---g~NAi~~~~ 186 (348)
T PRK04443 136 -RER---------------PDAV--------IIGEPSGW-DGITLGYKGRLLVTYVATSESFHSA-GP---EPNAAEDAI 186 (348)
T ss_pred -ccC---------------CCEE--------EEeCCCCc-cceeeecccEEEEEEEEEeCCCccC-CC---CCCHHHHHH
Confidence 111 1111 12233321 2477899999999999999999997 45 489999999
Q ss_pred HHHHHHHHhhhhh---C--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHH
Q 048461 288 ELALAVEKHVLES---G--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLA 353 (362)
Q Consensus 288 ~li~~L~~l~~~~---~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~ 353 (362)
+++.+|+++.... . ..+.++|++.|+ ...|+||++|++.+|+|..|.+ +.+++.+.++..+
T Consensus 187 ~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~---~~~n~iP~~~~~~~d~R~~p~~--~~~~i~~~i~~~~ 252 (348)
T PRK04443 187 EWWLAVEAWFEANDGRERVFDQVTPKLVDFD---SSSDGLTVEAEMTVGLRLPPGL--SPEEAREILDALL 252 (348)
T ss_pred HHHHHHHHHHhcCccccccccccceeeeEEe---cCCCCCCceEEEEEEEccCCCC--CHHHHHHHHHHhC
Confidence 9999998865311 1 134678999998 2569999999999999999998 8899988887764
No 33
>PRK09133 hypothetical protein; Provisional
Probab=99.95 E-value=1.4e-26 Score=236.50 Aligned_cols=250 Identities=15% Similarity=0.133 Sum_probs=179.7
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEE---Ec----ccCcEEEeccCCCceeee
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVR---ED----AVGNIYGEISSSSRGVWI 135 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~---~d----~~gNvia~~~~~~~~~~~ 135 (362)
..+.++++++|++|++|+|++++ ++|.++++||.++|+++|++++ .+ ..+|+++ +++
T Consensus 33 ~~~~~~~~~~l~~Lv~i~S~s~~--------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~--------~~~ 96 (472)
T PRK09133 33 TADQQAARDLYKELIEINTTAST--------GSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVA--------RLR 96 (472)
T ss_pred chhHHHHHHHHHHHhccCCCCCC--------cchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEE--------Eec
Confidence 45789999999999999998643 3588899999999999999753 32 2479999 887
Q ss_pred CCCCCCceEEEEecccCCCCC---------------------CccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcc
Q 048461 136 GNEAELASVATGSHIDAIPYS---------------------GKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTS 192 (362)
Q Consensus 136 G~~~~~p~Ill~sHlDTVp~g---------------------G~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~ 192 (362)
|+++ +|+|+|.||+||||++ |..|+|+|+++++.+++.|+... +.+++. +..
T Consensus 97 g~~~-~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~----~~~ 171 (472)
T PRK09133 97 GTDP-KKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDII----LAL 171 (472)
T ss_pred CCCC-CCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEE----EEE
Confidence 7543 4789999999999974 22488999999999999987533 345554 344
Q ss_pred cccCC-c-chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCc-ccc--cCCceeeEEEeeecceEEEEEEEee
Q 048461 193 IVDGK-N-ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGP-ILE--KEGTSIGIVTAIAAPASIKADFEGT 267 (362)
Q Consensus 193 ~~D~~-G-~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~-vle--~~~~~~giv~~~kG~~~~~I~v~G~ 267 (362)
+.||| + ......+.+.... .+..-+-+. |.+. .+. .+++...++.++||..|++|+++|+
T Consensus 172 ~~dEE~~g~~G~~~l~~~~~~--------------~~~~~~~i~-e~~~~~~~~~gept~~~i~~g~kG~~~~~i~v~G~ 236 (472)
T PRK09133 172 TGDEEGTPMNGVAWLAENHRD--------------LIDAEFALN-EGGGGTLDEDGKPVLLTVQAGEKTYADFRLEVTNP 236 (472)
T ss_pred ECccccCccchHHHHHHHHhh--------------ccCeEEEEE-CCCccccCCCCCceEEEeeeecceeEEEEEEEecC
Confidence 57776 3 2112222211100 011111222 3221 011 2344456778999999999999999
Q ss_pred CCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhh-------------------------------------------hC---
Q 048461 268 GGHAGAVLMPNRNDAGLAAAELALAVEKHVLE-------------------------------------------SG--- 301 (362)
Q Consensus 268 ~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~-------------------------------------------~~--- 301 (362)
++|++ .|+ +.|||..+++++.+|+++..+ ..
T Consensus 237 ~~Hss-~p~--~~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (472)
T PRK09133 237 GGHSS-RPT--KDNAIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSY 313 (472)
T ss_pred CCCCC-CCC--CCChHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcch
Confidence 99998 675 389999999999999864100 00
Q ss_pred --CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 302 --SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 302 --~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
...+++|+|.|++ |.+.|+||++|++++|+|..|++ +.+++...++.+++
T Consensus 314 ~~~~~~t~~~~~i~g-G~~~NvVP~~a~~~lDiR~~p~~--~~e~v~~~I~~~i~ 365 (472)
T PRK09133 314 NAMLRTTCVATMLEG-GHAENALPQRATANVNCRIFPGD--TIEAVRATLKQVVA 365 (472)
T ss_pred hheeeeeEEeeEEec-CCcCccCCCceEEEEEEEeCCch--hHHHHHHHHHHHhc
Confidence 0146899999997 58999999999999999999998 78888888877664
No 34
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=99.95 E-value=2.2e-26 Score=227.32 Aligned_cols=237 Identities=16% Similarity=0.097 Sum_probs=171.7
Q ss_pred HHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc---ccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 70 QKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED---AVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 70 ~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d---~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
+++|++|++|+|++ .+|.++++||+++|+++|+++++. ..+|+++ ++ |. ++|+|+|
T Consensus 2 ~~~l~~lv~ips~s----------~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~--------~~-g~--~~~~i~~ 60 (370)
T TIGR01246 2 TELAKELISRPSVT----------PNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWA--------TR-GT--GEPVLAF 60 (370)
T ss_pred hHHHHHHhcCCCCC----------cchHHHHHHHHHHHHHCCCEEEEEecCCCceEEE--------Ee-cC--CCcEEEE
Confidence 57899999999973 467889999999999999988754 4578999 76 33 3589999
Q ss_pred EecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcc---
Q 048461 147 GSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNI--- 199 (362)
Q Consensus 147 ~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~--- 199 (362)
+||+||||++. ..|+|+|+++++.+++.+++. .+.+++. +..+.||++.
T Consensus 61 ~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~----~~~~~dEE~~~~~ 136 (370)
T TIGR01246 61 AGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSIS----LLITSDEEGTAID 136 (370)
T ss_pred EccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEE----EEEEeccccCCCc
Confidence 99999999852 127889999999998877643 2456665 3445777531
Q ss_pred ---hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCC
Q 048461 200 ---SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLM 276 (362)
Q Consensus 200 ---~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~ 276 (362)
.+.+.+...+.. .+..+- .|.+.. ......++++++|..+++++++|+++|++ .|+
T Consensus 137 G~~~~~~~~~~~~~~---------------~d~~i~--~ep~~~---~~~~~~i~~~~~G~~~~~v~v~G~~~H~~-~p~ 195 (370)
T TIGR01246 137 GTKKVVETLMARDEL---------------IDYCIV--GEPSSV---KKLGDVIKNGRRGSITGNLTIKGIQGHVA-YPH 195 (370)
T ss_pred CHHHHHHHHHhcCCC---------------CCEEEE--cCCCCc---ccCCceEEEeeeEEEEEEEEEEccCcccC-Ccc
Confidence 111212111211 122221 111110 00112377889999999999999999987 687
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhhC---CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHH
Q 048461 277 PNRNDAGLAAAELALAVEKHVLESG---SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLA 353 (362)
Q Consensus 277 ~~g~nAi~aaa~li~~L~~l~~~~~---~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~ 353 (362)
. ++||+..+++++..|++...... -.++++|++.|++|.++.|+||++|++++|+|..|.+ +.+++.+.++.++
T Consensus 196 ~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~~~~nvvP~~~~~~~diR~~~~~--~~~~v~~~i~~~~ 272 (370)
T TIGR01246 196 L-ANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGTGANNVIPGELYVQFNLRFSTEV--SDEILKQRVEAIL 272 (370)
T ss_pred c-CCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCCCCCcccCCceEEEEEEecCCCC--CHHHHHHHHHHHH
Confidence 6 69999999999999987633211 1356899999997434789999999999999999998 7899999888876
Q ss_pred HH
Q 048461 354 LT 355 (362)
Q Consensus 354 ~~ 355 (362)
+.
T Consensus 273 ~~ 274 (370)
T TIGR01246 273 DQ 274 (370)
T ss_pred HH
Confidence 54
No 35
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.95 E-value=4e-26 Score=223.73 Aligned_cols=235 Identities=15% Similarity=0.046 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHC-CCeEEEcccCcEEEeccCCCceeeeCCCCCCceE
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGIS-GLSVREDAVGNIYGEISSSSRGVWIGNEAELASV 144 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~-Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~I 144 (362)
.+++++++++|++|||+ |++|.++++||.++|+++ |+++..+. .|+++ ++.+. .+++|
T Consensus 6 ~~~~~~~l~~li~ips~----------s~~e~~~~~~l~~~l~~~~~~~~~~~~-~~~~~--------~~~~~--~~~~i 64 (352)
T PRK13007 6 AADLAELTAALVDIPSV----------SGDEKALADAVEAALRALPHLEVIRHG-NSVVA--------RTDLG--RPSRV 64 (352)
T ss_pred HHHHHHHHHHHhcCCCC----------CchHHHHHHHHHHHHHhCcCceEEecC-CeEEE--------EccCC--CCCeE
Confidence 36899999999999996 457889999999999996 98876543 58999 77432 23689
Q ss_pred EEEecccCCCCC---------------CccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcc----hHHHHH
Q 048461 145 ATGSHIDAIPYS---------------GKYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNI----SFLDAA 205 (362)
Q Consensus 145 ll~sHlDTVp~g---------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~----~~~e~~ 205 (362)
+|.||+||||++ |..|+|+|+++++.+++.|. .+.+++. +..+.|||.. -+...+
T Consensus 65 ~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~--~~~~~i~----~~~~~~EE~~~~~~G~~~~~ 138 (352)
T PRK13007 65 VLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLA--EPAHDLT----LVFYDCEEVEAEANGLGRLA 138 (352)
T ss_pred EEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhh--ccCCCeE----EEEEecccccCCcccHHHHH
Confidence 999999999975 23588999999999999884 3455554 3335665421 111111
Q ss_pred HHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHH
Q 048461 206 RSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLA 285 (362)
Q Consensus 206 ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~a 285 (362)
.+.+.. .+.+..+ +.|++ ...++.+++|..|++|+++|+++|+| .|+. +.||+..
T Consensus 139 ~~~~~~-------------~~~d~~i--------~~ep~--~~~i~~~~~G~~~~~i~v~G~~~Hs~-~p~~-g~nAi~~ 193 (352)
T PRK13007 139 REHPEW-------------LAGDFAI--------LLEPT--DGVIEAGCQGTLRVTVTFHGRRAHSA-RSWL-GENAIHK 193 (352)
T ss_pred Hhcccc-------------cCCCEEE--------EecCC--CCceEeeccceEEEEEEEEecccccC-CCcc-CcCHHHH
Confidence 111100 0111111 22333 34577889999999999999999998 6765 6999999
Q ss_pred HHHHHHHHHHhhhhhC--CC---CeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 286 AAELALAVEKHVLESG--SI---DTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 286 aa~li~~L~~l~~~~~--~~---~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
+++++.+++++..+.. .. ..++|++.|++ |.+.|+||++|++++|+|..|.+ +.+++.+.++.++..
T Consensus 194 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~g-G~~~nviP~~a~~~~diR~~p~~--~~~~v~~~i~~~~~~ 265 (352)
T PRK13007 194 AAPVLARLAAYEPREVVVDGLTYREGLNAVRISG-GVAGNVIPDECVVNVNYRFAPDR--SLEEALAHVREVFDG 265 (352)
T ss_pred HHHHHHHHHHhcccccccCCCCccceeEeEeEec-CCcCccCCCeEEEEEEEeeCCCC--CHHHHHHHHHHHhcc
Confidence 9999999988654311 11 24789999996 68999999999999999999999 789999988876653
No 36
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=99.95 E-value=3.2e-26 Score=226.03 Aligned_cols=244 Identities=23% Similarity=0.194 Sum_probs=170.7
Q ss_pred HHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE--cccCcEEEeccCCCceeeeCCCCCCceEEEE
Q 048461 70 QKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE--DAVGNIYGEISSSSRGVWIGNEAELASVATG 147 (362)
Q Consensus 70 ~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~--d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~ 147 (362)
.+++.+|++|||+ |++|.++++||+++|+++|++++. +..+|+++ ++++.. ++|+|+|+
T Consensus 2 ~~~~~~L~~ips~----------s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva--------~~~~~~-~~~~i~l~ 62 (363)
T TIGR01891 2 TDIRRHLHEHPEL----------SFEEFKTSSLIAEALESLGIEVRRGVGGATGVVA--------TIGGGK-PGPVVALR 62 (363)
T ss_pred hHHHHHHhcCCCC----------CCchHHHHHHHHHHHHHcCCceEecCCCCcEEEE--------EEeCCC-CCCEEEEE
Confidence 4789999999986 568999999999999999999875 33578999 887643 34899999
Q ss_pred ecccCCCCCC------------cccc---HHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcchHHHHHHHcCC
Q 048461 148 SHIDAIPYSG------------KYDG---VTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAARSAGY 210 (362)
Q Consensus 148 sHlDTVp~gG------------~~Dg---~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~ 210 (362)
|||||||.++ +..| ..++++++.+++.|+.. .+.+++. +..+.|||.......+.+.+.
T Consensus 63 gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~~~G~~~~~~~~~ 138 (363)
T TIGR01891 63 ADMDALPIQEQTDLPYKSTNPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVR----LIFQPAEEGGGGATKMIEDGV 138 (363)
T ss_pred eccCCCCcccccCCCcccCCCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEE----EEEeecCcCcchHHHHHHCCC
Confidence 9999999643 1111 23456667777777642 2345555 445688774112222222221
Q ss_pred CCccccchhhhhccCCceeEEEeecccCcccccCCc-eeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHH
Q 048461 211 AKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGT-SIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAEL 289 (362)
Q Consensus 211 ~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~-~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~l 289 (362)
. .+++..+-.|.+.+ ++.+. ......+++|..|++|+++|+++|+ +.|+. |+||+.+|+++
T Consensus 139 ~-------------~~~d~~i~~e~~~~---~~~~~~~~~~~~~~~g~~~~~i~~~G~~~Ha-s~p~~-g~nAi~~~~~~ 200 (363)
T TIGR01891 139 L-------------DDVDAILGLHPDPS---IPAGTVGLRPGTIMAAADKFEVTIHGKGAHA-ARPHL-GRDALDAAAQL 200 (363)
T ss_pred C-------------CCcCEEEEECCCCC---CCCeEEEECCCcceeecceEEEEEEeecccc-cCccc-ccCHHHHHHHH
Confidence 1 12223332222110 01110 1122345789999999999999999 58875 69999999999
Q ss_pred HHHHHHhhhhhC-C-CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 290 ALAVEKHVLESG-S-IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 290 i~~L~~l~~~~~-~-~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+.+++++..... . ...++|+|.|++ |.+.|+||++|++++|+|..|.+ +.+++.+.++.+++.+.
T Consensus 201 i~~l~~~~~~~~~~~~~~~~~i~~i~g-G~~~nvvP~~~~~~~diR~~~~~--~~e~~~~~i~~~~~~~~ 267 (363)
T TIGR01891 201 VVALQQIVSRNVDPSRPAVVTVGIIEA-GGAPNVIPDKASMSGTVRSLDPE--VRDQIIDRIERIVEGAA 267 (363)
T ss_pred HHHHHHHhhccCCCCCCcEEEEEEEEc-CCCCcEECCeeEEEEEEEeCCHH--HHHHHHHHHHHHHHHHH
Confidence 999998643221 1 246899999996 46999999999999999999998 77888888888877654
No 37
>PRK13381 peptidase T; Provisional
Probab=99.95 E-value=2.7e-26 Score=229.77 Aligned_cols=244 Identities=11% Similarity=0.010 Sum_probs=174.3
Q ss_pred HHHHHHHHHHcCCCCCCCcccc-ccCCHhHHHHHHHHHHHHHHCCC-eEEEcccCcEEEeccCCCceeeeCCCCCCceEE
Q 048461 68 TLQKQIDELSTFSDTPAPSVTR-VLHTENDVLARSYIKNLMGISGL-SVREDAVGNIYGEISSSSRGVWIGNEAELASVA 145 (362)
Q Consensus 68 ~l~~~l~~Lv~i~s~~~~Gv~r-~~~s~~E~~a~~~l~~~L~~~Gl-~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Il 145 (362)
++++.|.+|++|+|.....-++ ++ +..+.++++||+++|+++|+ .++.|..+||+| +++|+++++|+|+
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~--------~~~g~~~~~~~ll 72 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPS-TPGQHELAKLLADELRELGLEDIVIDEHAIVTA--------KLPGNTPGAPRIG 72 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcC-ChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEE--------EEecCCCCCCeEE
Confidence 3678999999999875321111 23 45678999999999999999 567788899999 9887654348999
Q ss_pred EEecccCCCCCC-----------------------------------------------c----cccHHHHHHHHHHHHH
Q 048461 146 TGSHIDAIPYSG-----------------------------------------------K----YDGVTGVLGALEAINV 174 (362)
Q Consensus 146 l~sHlDTVp~gG-----------------------------------------------~----~Dg~~Gv~aal~a~~~ 174 (362)
|+||+||||+++ . .|+|+|+++++.+++.
T Consensus 73 l~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~ 152 (404)
T PRK13381 73 FIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLEN 152 (404)
T ss_pred EEEEecCCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHH
Confidence 999999998754 2 6889999999999998
Q ss_pred hhhcc-cccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEe
Q 048461 175 LKSRL-LAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTA 253 (362)
Q Consensus 175 L~s~~-~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~ 253 (362)
|+... ..+++. +..+.||+. |..+...++.+. + ..+..+-+| .+ + ...++++
T Consensus 153 l~~~~~~~g~i~----~~~~~dEE~----------g~~G~~~~~~~~-~---~~d~~~~~~--~~---~----~~~i~~~ 205 (404)
T PRK13381 153 LTENEVEHGDIV----VAFVPDEEI----------GLRGAKALDLAR-F---PVDFAYTID--CC---E----LGEVVYE 205 (404)
T ss_pred HHhcCCCCCCEE----EEEEccccc----------ccccHHHHHHhc-C---CCCEEEEec--CC---C----cceEEEe
Confidence 86432 355554 344567642 222221111110 0 112222222 22 1 1247788
Q ss_pred eecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCC--CCeEEEEEEEEecCCccceecCeEEEEEe
Q 048461 254 IAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGS--IDTVGTVGILELHPGAINSIPIKSQLEIG 331 (362)
Q Consensus 254 ~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~ 331 (362)
++|..|++|+++|+++|++..|.. +.|||.+|++++.+|+++..+... ...++|+|.|++ + |++|++++|
T Consensus 206 ~~G~~~~~v~v~Gk~aHa~~~p~~-g~NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g--~-----p~~~~~~~d 277 (404)
T PRK13381 206 NFNAASAEITITGVTAHPMSAKGV-LVNPILMANDFISHFPRQETPEHTEGREGYIWVNDLQG--N-----VNKAKLKLI 277 (404)
T ss_pred cCcceEEEEEEEeEecCCCCCccc-CcCHHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEe--C-----cceEEEEEE
Confidence 999999999999999998766764 699999999999999876433211 234578887773 2 899999999
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+|+.|.| +.+++.+.++.+++.+.
T Consensus 278 iR~~~~~--~~e~i~~~i~~~~~~~~ 301 (404)
T PRK13381 278 IRDFDLD--GFEARKQFIEEVVAKIN 301 (404)
T ss_pred EecCCHH--HHHHHHHHHHHHHHHHH
Confidence 9999998 78888888888777664
No 38
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=4.9e-26 Score=226.38 Aligned_cols=249 Identities=17% Similarity=0.128 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcc----------cCcEEEeccCCCceee
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDA----------VGNIYGEISSSSRGVW 134 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~----------~gNvia~~~~~~~~~~ 134 (362)
.++++++|++|++|+|.++.- -..+|.++++||+++|+++|++ +++.+ .+|+++ ++
T Consensus 4 ~~~~~~~l~~lv~i~s~s~~~-----~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~--------~~ 70 (400)
T PRK13983 4 RDEMIELLSELIAIPAVNPDF-----GGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVA--------KI 70 (400)
T ss_pred HHHHHHHHHHHhCcCCCCCCC-----CCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEE--------Ee
Confidence 478999999999999975320 0135889999999999999998 76421 479999 88
Q ss_pred eCCCCCCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhh
Q 048461 135 IGNEAELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDL 190 (362)
Q Consensus 135 ~G~~~~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l 190 (362)
+|.. +.++|+|+||+||||+++ ..|+|.|+++++.+++.|+... +.+++. +
T Consensus 71 ~g~~-~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~----~ 145 (400)
T PRK13983 71 PGGD-GKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLG----L 145 (400)
T ss_pred cCCC-CCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEE----E
Confidence 7754 247999999999999753 3478999999999999887532 455555 3
Q ss_pred cccccCC-cch-HHHHHHHc--CCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEe
Q 048461 191 TSIVDGK-NIS-FLDAARSA--GYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEG 266 (362)
Q Consensus 191 ~~~~D~~-G~~-~~e~~ee~--G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G 266 (362)
..+.||| |.. ....+.+. +. +. +.+..+- .+.+ ++....++.+++|..+++|+++|
T Consensus 146 ~~~~dEE~g~~~g~~~~~~~~~~~-----------~~--~~d~~i~--~~~~-----~~~~~~i~~~~~G~~~~~v~v~G 205 (400)
T PRK13983 146 AFVSDEETGSKYGIQYLLKKHPEL-----------FK--KDDLILV--PDAG-----NPDGSFIEIAEKSILWLKFTVKG 205 (400)
T ss_pred EEEeccccCCcccHHHHHhhcccc-----------cC--CCCEEEE--ecCC-----CCCCceeEEeecceEEEEEEEEe
Confidence 4457766 211 11111111 10 00 1111111 1111 12223467889999999999999
Q ss_pred eCCCCCcCCCCCCCcHHHHHHHHHHHHHH-hhhhhC-------CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCC
Q 048461 267 TGGHAGAVLMPNRNDAGLAAAELALAVEK-HVLESG-------SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEE 338 (362)
Q Consensus 267 ~~aHAg~~P~~~g~nAi~aaa~li~~L~~-l~~~~~-------~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E 338 (362)
+++|+| .|+. ++||+..+++++.++++ +..... +...+++++.+.+++++.|+||++|++++|+|..|.+
T Consensus 206 ~~~Hs~-~p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~ 283 (400)
T PRK13983 206 KQCHAS-TPEN-GINAHRAAADFALELDEALHEKFNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDY 283 (400)
T ss_pred EccccC-CCCC-CCCHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCC
Confidence 999998 6886 69999999999999987 432211 0124678899986446899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 048461 339 YASCEDMENGVKVLALTL 356 (362)
Q Consensus 339 ~~~~ed~~~gi~~l~~~l 356 (362)
+.+++.+.++.+++.+
T Consensus 284 --~~~~v~~~l~~~~~~~ 299 (400)
T PRK13983 284 --DLDEVLKDIKEIADEF 299 (400)
T ss_pred --CHHHHHHHHHHHHHHh
Confidence 8899999988887754
No 39
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.95 E-value=4.5e-26 Score=227.64 Aligned_cols=247 Identities=17% Similarity=0.137 Sum_probs=177.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc----ccCcEEEeccCCCceeeeCCCCC
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED----AVGNIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d----~~gNvia~~~~~~~~~~~G~~~~ 140 (362)
..+++++.|++|++|+|++++ .+|.++++||+++|+++|++++.. ...|+++ +++|++++
T Consensus 7 ~~~~~~~~l~~lv~ipS~~~~--------~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~--------~~~g~~~~ 70 (400)
T TIGR01880 7 EEDIAVTRFREYLRINTVQPN--------PDYAACVDFLIKQADELGLARKTIEFVPGKPVVVL--------TWPGSNPE 70 (400)
T ss_pred chHHHHHHHHHHhccCccCCC--------ccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEE--------EEecCCCC
Confidence 468899999999999998643 247889999999999999987532 2357999 88775433
Q ss_pred CceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccC
Q 048461 141 LASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDG 196 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~ 196 (362)
.|+|+|++||||||+++ ..|+|.++++++.+++.|+... +.+++. +..+.||
T Consensus 71 ~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~----l~~~~dE 146 (400)
T TIGR01880 71 LPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIH----ISFVPDE 146 (400)
T ss_pred CCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEE----EEEeCCc
Confidence 48999999999999641 2378889999999999887533 455555 3445776
Q ss_pred Cc-c-hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCce-eeEEEeeecceEEEEEEEeeCCCCCc
Q 048461 197 KN-I-SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTS-IGIVTAIAAPASIKADFEGTGGHAGA 273 (362)
Q Consensus 197 ~G-~-~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~-~giv~~~kG~~~~~I~v~G~~aHAg~ 273 (362)
+. - .....+.+.+. +. .++..+-+ +.|. +++.. ..++.++||..+++|+++|+++|++
T Consensus 147 E~g~~~G~~~~~~~~~-----------~~--~~~~~~~~--d~g~---~~~~~~~~i~~~~kG~~~~~l~v~G~~~Hs~- 207 (400)
T TIGR01880 147 EIGGHDGMEKFAKTDE-----------FK--ALNLGFAL--DEGL---ASPDDVYRVFYAERVPWWVVVTAPGNPGHGS- 207 (400)
T ss_pred ccCcHhHHHHHHHhhh-----------cc--CCceEEEE--cCCC---cccccccceeEEeeEEEEEEEEEecCCCCCC-
Confidence 52 1 12223222221 00 11111111 1111 12222 3578899999999999999999997
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhhh------hC----C-CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCH
Q 048461 274 VLMPNRNDAGLAAAELALAVEKHVLE------SG----S-IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASC 342 (362)
Q Consensus 274 ~P~~~g~nAi~aaa~li~~L~~l~~~------~~----~-~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ 342 (362)
.|. ..||+..|++++..|+++... .. . ..+++|+|.|++ |...|+||++|++.+|+|..|.| +.
T Consensus 208 ~~~--~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g-G~~~nvIP~~a~~~~diR~~p~~--~~ 282 (400)
T TIGR01880 208 KLM--ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIGDVTSVNLTKLKG-GVQSNVIPSEAEAGFDIRLAPSV--DF 282 (400)
T ss_pred CCC--CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccccccceeecceecc-CCcCCcCCCccEEEEEEeeCCCC--CH
Confidence 453 379999999999988775311 01 0 137999999996 57899999999999999999999 88
Q ss_pred HHHHHHHHHHHHH
Q 048461 343 EDMENGVKVLALT 355 (362)
Q Consensus 343 ed~~~gi~~l~~~ 355 (362)
+++.+.++.+++.
T Consensus 283 ~~~~~~i~~~i~~ 295 (400)
T TIGR01880 283 EEMENRLDEWCAD 295 (400)
T ss_pred HHHHHHHHHHHhc
Confidence 9999988888764
No 40
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=99.95 E-value=5.5e-26 Score=225.64 Aligned_cols=229 Identities=13% Similarity=0.043 Sum_probs=164.6
Q ss_pred HHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEccc-CcEEEeccCCCceeeeCCCCCCceEEEEec
Q 048461 72 QIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAV-GNIYGEISSSSRGVWIGNEAELASVATGSH 149 (362)
Q Consensus 72 ~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~-gNvia~~~~~~~~~~~G~~~~~p~Ill~sH 149 (362)
+|++|++|+|+ |.+|.++++||.++|+++|++ ++++.. .|+++ ++.+. .+|+|+|.||
T Consensus 1 ll~~Lv~ipS~----------s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva--------~~~~~--~~~~l~l~gH 60 (373)
T TIGR01900 1 LLQQIMDIFSP----------SDHEGPIADEIEAALNNLELEGLEVFRFGDNVLA--------RTDFG--KASRVILAGH 60 (373)
T ss_pred ChHHHhCCCCC----------CchHHHHHHHHHHHHhhccccCceEEEECCEEEE--------ecCCC--CCCeEEEeCc
Confidence 37899999996 356889999999999999652 333222 48999 77442 2478999999
Q ss_pred ccCCCCCC--------------------------------ccccHHHHHHHHHHHHHhhhc----ccccccchhhhhccc
Q 048461 150 IDAIPYSG--------------------------------KYDGVTGVLGALEAINVLKSR----LLAGIESLAKDLTSI 193 (362)
Q Consensus 150 lDTVp~gG--------------------------------~~Dg~~Gv~aal~a~~~L~s~----~~~g~~~~~e~l~~~ 193 (362)
|||||+++ ..|+|+|+++++.+++.|+.. .+.+++. +..+
T Consensus 61 ~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~----~~~~ 136 (373)
T TIGR01900 61 IDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLT----LIAY 136 (373)
T ss_pred cccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEE----EEEE
Confidence 99998642 137889999999999988421 2455555 3345
Q ss_pred ccCCcc----hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCC
Q 048461 194 VDGKNI----SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGG 269 (362)
Q Consensus 194 ~D~~G~----~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~a 269 (362)
.|||.. -....+++ ... . ...+. ++..+++...++.+++|..|++|+++|+++
T Consensus 137 ~dEE~~~~~~G~~~~~~~-~~~----~--------~~~d~----------~iv~Ept~~~i~~g~~G~~~~~i~v~G~~~ 193 (373)
T TIGR01900 137 DCEEVAAEKNGLGHIRDA-HPD----W--------LAADF----------AIIGEPTGGGIEAGCNGNIRFDVTAHGVAA 193 (373)
T ss_pred ecccccCCCCCHHHHHHh-Ccc----c--------ccCCE----------EEEECCCCCcccccceeeEEEEEEEEeecc
Confidence 776521 11111111 100 0 01111 112233445688899999999999999999
Q ss_pred CCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhC---C--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHH
Q 048461 270 HAGAVLMPNRNDAGLAAAELALAVEKHVLESG---S--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCED 344 (362)
Q Consensus 270 HAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~---~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed 344 (362)
|++ .|+. +.|||..|++++.+|+++..... . ...++|++.|++ |.+.|+||++|++++|+|..|.| +.++
T Consensus 194 H~s-~p~~-g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~t~~v~~I~G-G~~~nvVP~~a~~~~diR~~p~~--~~e~ 268 (373)
T TIGR01900 194 HSA-RAWL-GDNAIHKAADIINKLAAYEAAEVNIDGLDYREGLNATFCEG-GKANNVIPDEARMHLNFRFAPDK--DLAE 268 (373)
T ss_pred ccC-CCCC-CCCHHHHHHHHHHHHHHhhcccccccCCcccceEEEEEEeC-CCCCcccCCeEEEEEEEecCCCc--CHHH
Confidence 997 7875 69999999999999988643211 0 136899999996 57999999999999999999999 8899
Q ss_pred HHHHHHHH
Q 048461 345 MENGVKVL 352 (362)
Q Consensus 345 ~~~gi~~l 352 (362)
+.+.++.+
T Consensus 269 ~~~~i~~~ 276 (373)
T TIGR01900 269 AKALMMGA 276 (373)
T ss_pred HHHHHHhh
Confidence 99988654
No 41
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.95 E-value=5.5e-26 Score=226.12 Aligned_cols=242 Identities=18% Similarity=0.130 Sum_probs=175.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCc------------EEEeccCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGN------------IYGEISSSSRG 132 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gN------------via~~~~~~~~ 132 (362)
..++++++|++|++|+|.++++ .+|.++++||+++|+++|+++++++.++ +++
T Consensus 4 ~~~~~~~~l~~lv~i~S~s~~~-------~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-------- 68 (394)
T PRK08651 4 MMFDIVEFLKDLIKIPTVNPPG-------ENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIA-------- 68 (394)
T ss_pred hHHHHHHHHHHHhcCCccCCCC-------cCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEE--------
Confidence 4688999999999999975432 4578899999999999999988765433 455
Q ss_pred eeeCCCCCCceEEEEecccCCCCCC-c--------------------cccHHHHHHHHHHHHHhhhcccccccchhhhhc
Q 048461 133 VWIGNEAELASVATGSHIDAIPYSG-K--------------------YDGVTGVLGALEAINVLKSRLLAGIESLAKDLT 191 (362)
Q Consensus 133 ~~~G~~~~~p~Ill~sHlDTVp~gG-~--------------------~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~ 191 (362)
.. +.+ .|+|+|.|||||||.++ + .|+|+|++++|.+++.|+... .+++. +.
T Consensus 69 ~~-~~~--~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~-~~~v~----~~ 140 (394)
T PRK08651 69 RR-GSG--NPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG-DGNIE----LA 140 (394)
T ss_pred Ee-CCC--CceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC-CCCEE----EE
Confidence 44 322 38999999999999853 2 256889999999999886433 55555 33
Q ss_pred ccccCCc-chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCC
Q 048461 192 SIVDGKN-ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGH 270 (362)
Q Consensus 192 ~~~D~~G-~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aH 270 (362)
.+.||+. ......+-+.+.. ..+..+ +.++.+. ..++.+++|..+++|+++|+++|
T Consensus 141 ~~~~EE~g~~G~~~~~~~~~~--------------~~d~~i--------~~~~~~~-~~i~~~~~G~~~~~i~v~G~~~H 197 (394)
T PRK08651 141 IVPDEETGGTGTGYLVEEGKV--------------TPDYVI--------VGEPSGL-DNICIGHRGLVWGVVKVYGKQAH 197 (394)
T ss_pred EecCccccchhHHHHHhccCC--------------CCCEEE--------EecCCCC-CceEEecccEEEEEEEEEEeccc
Confidence 4577652 1122222221110 011111 1222222 14788899999999999999999
Q ss_pred CCcCCCCCCCcHHHHHHHHHHHHHHhhhhh---------CCCCeEEEEEE--EEecCCccceecCeEEEEEeeeCCCCCC
Q 048461 271 AGAVLMPNRNDAGLAAAELALAVEKHVLES---------GSIDTVGTVGI--LELHPGAINSIPIKSQLEIGYSHKPEEY 339 (362)
Q Consensus 271 Ag~~P~~~g~nAi~aaa~li~~L~~l~~~~---------~~~~~t~tvG~--I~~gg~a~NvVP~~a~l~i~~rh~p~E~ 339 (362)
++ .|+. +.||+.+|++++.+|++...+. .....++|+|. |++ |++.|+||++|++++|+|..|.+
T Consensus 198 ~~-~p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ig~~~i~g-G~~~nviP~~a~~~~diR~~~~~- 273 (394)
T PRK08651 198 AS-TPWL-GINAFEAAAKIAERLKSSLSTIKSKYEYDDERGAKPTVTLGGPTVEG-GTKTNIVPGYCAFSIDRRLIPEE- 273 (394)
T ss_pred cC-CCcc-ccCHHHHHHHHHHHHHHHHHhhhccccccccccCCCceeecceeeeC-CCCCCccCCEEEEEEEeeeCCCC-
Confidence 97 6875 5999999999999998653211 01245789999 885 68999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 048461 340 ASCEDMENGVKVLALTLA 357 (362)
Q Consensus 340 ~~~ed~~~gi~~l~~~l~ 357 (362)
+.+++.+.++..++.+.
T Consensus 274 -~~e~i~~~i~~~~~~~~ 290 (394)
T PRK08651 274 -TAEEVRDELEALLDEVA 290 (394)
T ss_pred -CHHHHHHHHHHHHHHHh
Confidence 88999999988887653
No 42
>PRK07907 hypothetical protein; Provisional
Probab=99.94 E-value=1.3e-25 Score=228.02 Aligned_cols=250 Identities=16% Similarity=0.123 Sum_probs=175.2
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCC-eEEE---cccCcEEEeccCCCceeeeCCCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGL-SVRE---DAVGNIYGEISSSSRGVWIGNEA 139 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl-~v~~---d~~gNvia~~~~~~~~~~~G~~~ 139 (362)
-+.++++++|++|++|+|.++.+- ...+|.++++||+++|+++|+ ++++ +..+|+++ +++++.
T Consensus 15 ~~~~~~~~ll~~LV~ipS~s~~~~----~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a--------~~~~~~- 81 (449)
T PRK07907 15 ELLPRVRADLEELVRIPSVAADPF----RREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIG--------TRPAPP- 81 (449)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcc----chhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEE--------EecCCC-
Confidence 356889999999999999864321 134578899999999999998 7776 34579999 887643
Q ss_pred CCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCC
Q 048461 140 ELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~ 197 (362)
++|+|+|.||+||||+++ ..|+|+|+++++.|++.| ...+...+. +..+.||+
T Consensus 82 ~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~~~~~~~i~----~~~~~dEE 156 (449)
T PRK07907 82 GAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-GGDLPVGVT----VFVEGEEE 156 (449)
T ss_pred CCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-ccCCCCcEE----EEEEcCcc
Confidence 358999999999999852 248899999999999988 223334443 22345654
Q ss_pred -c-chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCce---eeEEEeeecceEEEEEEE--eeCCC
Q 048461 198 -N-ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTS---IGIVTAIAAPASIKADFE--GTGGH 270 (362)
Q Consensus 198 -G-~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~---~giv~~~kG~~~~~I~v~--G~~aH 270 (362)
| ..+...+++.+- . + ..+.. .+.|++... ..++.++||..|++++++ |+++|
T Consensus 157 ~g~~g~~~~l~~~~~-----~-----~---~~d~~--------iv~E~~~~~~~~p~i~~~~kG~~~~~l~v~~~G~~~H 215 (449)
T PRK07907 157 MGSPSLERLLAEHPD-----L-----L---AADVI--------VIADSGNWSVGVPALTTSLRGNADVVVTVRTLEHAVH 215 (449)
T ss_pred cCCccHHHHHHhchH-----h-----h---cCCEE--------EEecCCcCCCCCeEEEEecCCcEEEEEEEEECCCCCC
Confidence 2 112222222110 0 0 01111 122332221 137788999999999999 89999
Q ss_pred CCcCCCCCCCcHHHHHHHHHHHHHHhhhh--------hC----------------------------------CCCeEEE
Q 048461 271 AGAVLMPNRNDAGLAAAELALAVEKHVLE--------SG----------------------------------SIDTVGT 308 (362)
Q Consensus 271 Ag~~P~~~g~nAi~aaa~li~~L~~l~~~--------~~----------------------------------~~~~t~t 308 (362)
+|..+. .+.||+..+++++.+|++...+ .. -..+++|
T Consensus 216 ss~~~~-~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (449)
T PRK07907 216 SGQFGG-AAPDALTALVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAIT 294 (449)
T ss_pred Cccccc-cCCCHHHHHHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEE
Confidence 984233 3589999999999999764210 00 0135789
Q ss_pred EEEEEec--CCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 309 VGILELH--PGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 309 vG~I~~g--g~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
++.|+++ +++.|+||++|++++|+|..|++ +.+++.+.++..++.
T Consensus 295 i~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~--~~e~v~~~l~~~l~~ 341 (449)
T PRK07907 295 VIGIDAPPVAGASNALPPSARARLSLRVAPGQ--DAAEAQDALVAHLEA 341 (449)
T ss_pred EEeeecCCCCCCCCEecCceEEEEEEEcCCCC--CHHHHHHHHHHHHHh
Confidence 9999853 35889999999999999999998 889999988877654
No 43
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.94 E-value=2.7e-25 Score=223.94 Aligned_cols=243 Identities=19% Similarity=0.156 Sum_probs=176.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc----ccCcEEEeccCCCceeeeCCCCC
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED----AVGNIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d----~~gNvia~~~~~~~~~~~G~~~~ 140 (362)
+.++++++|++|++|+|++++ ..+|.++++||+++|+++|++++++ ..+|+++ +++|+++.
T Consensus 11 ~~~~~~~~l~~Lv~i~S~s~~-------~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia--------~~~g~~~~ 75 (421)
T PRK08596 11 RKDELLELLKTLVRFETPAPP-------ARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVG--------VKKGTESD 75 (421)
T ss_pred hHHHHHHHHHHHhcCCCCCCC-------chhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEE--------EecCCCCC
Confidence 457899999999999998643 2468899999999999999998764 3479999 88775332
Q ss_pred -CceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhccccc
Q 048461 141 -LASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVD 195 (362)
Q Consensus 141 -~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D 195 (362)
.|+|+|.||+||||++. ..|+|+|+++++.+++.|+... +.+.+. +..+.|
T Consensus 76 ~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~----~~~~~d 151 (421)
T PRK08596 76 AYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLI----FQSVIG 151 (421)
T ss_pred CCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEE----EEEEec
Confidence 36799999999999752 2378899999999999987533 455554 334567
Q ss_pred CCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeC-------
Q 048461 196 GKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTG------- 268 (362)
Q Consensus 196 ~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~------- 268 (362)
|+. |..+...++... ...-+.+ +.|+... . +.+.+|...++++++|+.
T Consensus 152 EE~----------g~~G~~~~~~~~------~~~d~~i------~~ep~~~--~-~~~~~G~~~~~~~v~g~~~~~~~~~ 206 (421)
T PRK08596 152 EEV----------GEAGTLQCCERG------YDADFAV------VVDTSDL--H-MQGQGGVITGWITVKSPQTFHDGTR 206 (421)
T ss_pred ccc----------CCcCHHHHHhcC------CCCCEEE------ECCCCCC--c-cccccceeeEEEEEEeecccccccc
Confidence 652 222211111110 0001112 2333222 2 367889888888888764
Q ss_pred ---CCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhh------C---CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCC
Q 048461 269 ---GHAGAVLMPNRNDAGLAAAELALAVEKHVLES------G---SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKP 336 (362)
Q Consensus 269 ---aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~------~---~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p 336 (362)
+|+| .|+. |.||+..|++++.+|+++.... . ...+++|++.|++ |...|+||++|++++|+|..|
T Consensus 207 ~~~~H~~-~p~~-G~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g-G~~~nvvP~~~~~~~d~R~~p 283 (421)
T PRK08596 207 RQMIHAG-GGLF-GASAIEKMMKIIQSLQELERHWAVMKSYPGFPPGTNTINPAVIEG-GRHAAFIADECRLWITVHFYP 283 (421)
T ss_pred ccccccc-CCcc-CcCHHHHHHHHHHHHHHHHHHHhhcccCccCCCCCcceeeeeeeC-CCCCCccCceEEEEEEeeeCC
Confidence 7987 6875 6999999999999999874211 0 1236899999996 589999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 048461 337 EEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 337 ~E~~~~ed~~~gi~~l~~~l 356 (362)
++ +.+++.+.++.+++..
T Consensus 284 ~~--~~~~v~~~i~~~~~~~ 301 (421)
T PRK08596 284 NE--TYEQVIKEIEEYIGKV 301 (421)
T ss_pred CC--CHHHHHHHHHHHHHHH
Confidence 99 8899999999887754
No 44
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.94 E-value=9.7e-26 Score=225.86 Aligned_cols=252 Identities=23% Similarity=0.232 Sum_probs=181.6
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccC------cEEEeccCCCceeeeCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVG------NIYGEISSSSRGVWIGN 137 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~g------Nvia~~~~~~~~~~~G~ 137 (362)
...+++++.|++|++|+|.+ ..++.++++|++++|+++|+.++.+..+ |+++ ++.+.
T Consensus 10 ~~~~~~~~~l~~lv~~~s~s---------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~--------~~~~~ 72 (409)
T COG0624 10 DLLDDILELLKELVRIPSVS---------AGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVA--------RLGGG 72 (409)
T ss_pred HhhHHHHHHHHHHhcCCCCC---------cccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEE--------EecCC
Confidence 34677889999999999975 2578899999999999999988877665 8999 88775
Q ss_pred CCCCceEEEEecccCCCCCCc----------------------cccHHHHHHHHHHHHHhhhc--ccccccchhhhhccc
Q 048461 138 EAELASVATGSHIDAIPYSGK----------------------YDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSI 193 (362)
Q Consensus 138 ~~~~p~Ill~sHlDTVp~gG~----------------------~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~ 193 (362)
.+ .|.|+|.||+||||+++. .|+|+++++.+.|++.+... .+.+++. +...
T Consensus 73 ~~-~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~----~~~~ 147 (409)
T COG0624 73 DG-GPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVR----LLFT 147 (409)
T ss_pred CC-CCeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEE----EEEE
Confidence 43 389999999999999751 26788999999999998752 3445554 3345
Q ss_pred ccCCc--chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCC
Q 048461 194 VDGKN--ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHA 271 (362)
Q Consensus 194 ~D~~G--~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHA 271 (362)
.||+. ..+...+++.. . ...+...+++|+|+ .++.+..+. ++.+++|..|++|+++|+++|+
T Consensus 148 ~dEE~g~~~~~~~~~~~~-~------------~~~~~~d~~i~~E~--~~~~~~~~~-~~~~~kG~~~~~v~v~G~~~Ha 211 (409)
T COG0624 148 ADEESGGAGGKAYLEEGE-E------------ALGIRPDYEIVGEP--TLESEGGDI-IVVGHKGSLWLEVTVKGKAGHA 211 (409)
T ss_pred eccccCCcchHHHHHhcc-h------------hhccCCCEEEeCCC--CCcccCCCe-EEEcceeEEEEEEEEEeecccc
Confidence 67642 11111111111 0 01234567888887 343343333 4448999999999999999999
Q ss_pred CcCCCCCCCc----HHHHHHHHHHHHHHhhhhhCCC-CeEEEEEEEEecCCc-------cceecCeEEEEEeeeCCCCCC
Q 048461 272 GAVLMPNRND----AGLAAAELALAVEKHVLESGSI-DTVGTVGILELHPGA-------INSIPIKSQLEIGYSHKPEEY 339 (362)
Q Consensus 272 g~~P~~~g~n----Ai~aaa~li~~L~~l~~~~~~~-~~t~tvG~I~~gg~a-------~NvVP~~a~l~i~~rh~p~E~ 339 (362)
|.+|+..+.| |+..+++++..+.++..+.. . +.++|+|.+.++.+. .|+||++|++++|+|+.|.+
T Consensus 212 s~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~- 289 (409)
T COG0624 212 STTPPDLGRNPIHAAIEALAELIEELGDLAGEGF-DGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGE- 289 (409)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHhcccccccc-cCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcC-
Confidence 9764445799 66777777766665544322 3 578899988864433 69999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 048461 340 ASCEDMENGVKVLALTL 356 (362)
Q Consensus 340 ~~~ed~~~gi~~l~~~l 356 (362)
+.+++...++..++..
T Consensus 290 -~~~~~~~~v~~~i~~~ 305 (409)
T COG0624 290 -DLDDVLEELEAELRAI 305 (409)
T ss_pred -CHHHHHHHHHHHHHHh
Confidence 7677666666666544
No 45
>PRK08262 hypothetical protein; Provisional
Probab=99.94 E-value=2.1e-25 Score=228.50 Aligned_cols=260 Identities=17% Similarity=0.192 Sum_probs=177.1
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCc-cccccCCHhH-HHHHHHHHHHHHHCCCeEEEccc--CcEEEeccCCCceee
Q 048461 59 VSSLSVDTETLQKQIDELSTFSDTPAPS-VTRVLHTEND-VLARSYIKNLMGISGLSVREDAV--GNIYGEISSSSRGVW 134 (362)
Q Consensus 59 ~~~~~~~~~~l~~~l~~Lv~i~s~~~~G-v~r~~~s~~E-~~a~~~l~~~L~~~Gl~v~~d~~--gNvia~~~~~~~~~~ 134 (362)
+.....+.++++++|++|++|+|.++.. .. -.... .++++||+++|+.+|++++.... .|+++ .+
T Consensus 36 ~~~~~~~~~~~v~~L~~lv~i~S~s~~~~~~---~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~--------~~ 104 (486)
T PRK08262 36 VAPVAVDEDAAAERLSEAIRFRTISNRDRAE---DDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLY--------TW 104 (486)
T ss_pred cCCCcCCHHHHHHHHHHhcccceeccCCCCc---ccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEE--------EE
Confidence 3445678999999999999999976421 00 00011 35789999999999997665433 37888 77
Q ss_pred eCCCCCCceEEEEecccCCCCC------------------------CccccHHHHHHHHHHHHHhhhcc--cccccchhh
Q 048461 135 IGNEAELASVATGSHIDAIPYS------------------------GKYDGVTGVLGALEAINVLKSRL--LAGIESLAK 188 (362)
Q Consensus 135 ~G~~~~~p~Ill~sHlDTVp~g------------------------G~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e 188 (362)
+|.+++.|+|+|.||+||||++ |..|+|+|+++++.|++.|+... +.+++.
T Consensus 105 ~g~~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~--- 181 (486)
T PRK08262 105 KGSDPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIY--- 181 (486)
T ss_pred ECCCCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEE---
Confidence 7754433789999999999975 12367899999999999987433 455555
Q ss_pred hhcccccCC-cc----hHHHHHHHcCCCCccccchhhhhccCCceeEEEe--ecccCccc-ccCCceeeEEEeeecceEE
Q 048461 189 DLTSIVDGK-NI----SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVEL--HIEQGPIL-EKEGTSIGIVTAIAAPASI 260 (362)
Q Consensus 189 ~l~~~~D~~-G~----~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~el--hie~g~vl-e~~~~~~giv~~~kG~~~~ 260 (362)
+..+.||| |. .+.+.+.+.+.. .+.+++- -+..++.. ..+++ ..++.+++|..++
T Consensus 182 -llf~~dEE~g~~G~~~l~~~l~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~p~-~~i~~~~kG~~~~ 244 (486)
T PRK08262 182 -LAFGHDEEVGGLGARAIAELLKERGVR---------------LAFVLDEGGAITEGVLPGVKKPV-ALIGVAEKGYATL 244 (486)
T ss_pred -EEEecccccCCcCHHHHHHHHHHhcCC---------------EEEEEeCCceecccccCCCCceE-EeeEEeeeeeEEE
Confidence 33457765 21 122222222221 1111110 00011100 01111 2466788999999
Q ss_pred EEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhh-----------------h-----------------------
Q 048461 261 KADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLE-----------------S----------------------- 300 (362)
Q Consensus 261 ~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~-----------------~----------------------- 300 (362)
+|+++|+++|+| .|+ . .||+..+++++.+|++...+ .
T Consensus 245 ~i~v~G~~~Hss-~p~-~-~nai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (486)
T PRK08262 245 ELTARATGGHSS-MPP-R-QTAIGRLARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLA 321 (486)
T ss_pred EEEEecCCCCCC-CCC-C-CCHHHHHHHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHh
Confidence 999999999997 676 3 99999999999999863100 0
Q ss_pred -C-----CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 301 -G-----SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 301 -~-----~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
. ...+|+|+|.|++ |.+.|+||++|++++|+|..|++ +.+++.+-++.+++.
T Consensus 322 ~~~~~~~~~~~t~~i~~I~g-G~~~NvIP~~a~~~~diR~~p~~--~~~~i~~~i~~~~~~ 379 (486)
T PRK08262 322 KSPETAAMLRTTTAPTMLKG-SPKDNVLPQRATATVNFRILPGD--SVESVLAHVRRAVAD 379 (486)
T ss_pred cCCccceeEEeeeeeeEEec-CCccccCCCccEEEEEEEeCCCC--CHHHHHHHHHHHhcc
Confidence 0 0246899999996 57899999999999999999998 789998888877653
No 46
>PRK07906 hypothetical protein; Provisional
Probab=99.94 E-value=1.3e-25 Score=226.31 Aligned_cols=246 Identities=15% Similarity=0.079 Sum_probs=169.6
Q ss_pred HHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc----cCcEEEeccCCCceeeeCCCCCCceEE
Q 048461 70 QKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA----VGNIYGEISSSSRGVWIGNEAELASVA 145 (362)
Q Consensus 70 ~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~----~gNvia~~~~~~~~~~~G~~~~~p~Il 145 (362)
+++|++|++|+|.+++. ..+.+|.++++||.++|+++|++++.++ .+|+++ +++|++++.|+|+
T Consensus 2 ~~ll~~Lv~i~S~s~~~----~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~--------~~~g~~~~~~~ll 69 (426)
T PRK07906 2 VDLCSELIRIDTTNTGD----GTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVA--------RLPGADPSRPALL 69 (426)
T ss_pred hHHHHHHhcccccCCCC----CCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEE--------EEeCCCCCCCcEE
Confidence 67899999999976321 1346789999999999999999988754 469999 8877544457899
Q ss_pred EEecccCCCCC---------------------CccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc--h
Q 048461 146 TGSHIDAIPYS---------------------GKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI--S 200 (362)
Q Consensus 146 l~sHlDTVp~g---------------------G~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~--~ 200 (362)
|.+|+||||++ |..|+|.|+++++++++.|+... +.+++. +..+.|||+. .
T Consensus 70 l~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~g~~~ 145 (426)
T PRK07906 70 VHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLV----FAFVADEEAGGTY 145 (426)
T ss_pred EEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEE----EEEecCcccchhh
Confidence 99999999974 22378889999999999987543 344554 3445777642 1
Q ss_pred HHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcc--cccCC-ceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 201 FLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPI--LEKEG-TSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 201 ~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~v--le~~~-~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
....+.+.... .+ ..... +-.|.+.. ..+++ ....++.++||..|++|+++|+++|++ .|.
T Consensus 146 g~~~l~~~~~~----~~-------~~~~~---ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss-~p~- 209 (426)
T PRK07906 146 GAHWLVDNHPE----LF-------EGVTE---AISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGS-MVN- 209 (426)
T ss_pred hHHHHHHHHHH----hc-------cchhe---EEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCC-CCC-
Confidence 22222111100 00 00000 11122211 01111 123578899999999999999999987 575
Q ss_pred CCCcHHHHHHHHHHHHHHhhhh-----------------h----CCC--------------------CeEEEEEEEEecC
Q 048461 278 NRNDAGLAAAELALAVEKHVLE-----------------S----GSI--------------------DTVGTVGILELHP 316 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~-----------------~----~~~--------------------~~t~tvG~I~~gg 316 (362)
+.|||..+++++.+|+++..+ . .+. .+++|+|.|++ |
T Consensus 210 -~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~g-G 287 (426)
T PRK07906 210 -DDNAVTRLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKA-G 287 (426)
T ss_pred -CCCHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEec-c
Confidence 389999999999999754210 0 000 35899999996 5
Q ss_pred CccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 317 GAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 317 ~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
.+.|+||++|++++|+|..|++ + +++.+.++.+
T Consensus 288 ~~~NviP~~~~~~~d~R~~p~~--~-~~i~~~i~~~ 320 (426)
T PRK07906 288 YKVNVIPGTAEAVVDGRFLPGR--E-EEFLATVDEL 320 (426)
T ss_pred CccccCCCceEEEEEEeECCCC--c-HHHHHHHHHH
Confidence 7899999999999999999987 3 5566555554
No 47
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.94 E-value=5.6e-26 Score=228.26 Aligned_cols=247 Identities=15% Similarity=0.125 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHcCCCCC-CCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcc-cCcEEEeccCCCceeeeCCCC-CCc
Q 048461 67 ETLQKQIDELSTFSDTP-APSVTRVLHTENDVLARSYIKNLMGISGLS-VREDA-VGNIYGEISSSSRGVWIGNEA-ELA 142 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~-~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~-~gNvia~~~~~~~~~~~G~~~-~~p 142 (362)
+++++.|.++++|+|++ +..-+-||.|++| +.++||+++|+++|++ |++|+ .|||+| +++|+.+ +.|
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~-~~a~~l~~~l~~lG~~~v~~d~~~gnv~~--------~~~~~~~~~~~ 73 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQL-TFGNMLVDDLKSLGLQDAHYDEKNGYVIA--------TIPSNTDKDVP 73 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHH-HHHHHHHHHHHHcCCceEEEcCCceEEEE--------EecCCCCCCCC
Confidence 68999999999999876 4566778889999 6999999999999996 99998 999999 9887542 138
Q ss_pred eEEEEecccCCCC-------------CC----------------------------c----------cccHHHHHHHHHH
Q 048461 143 SVATGSHIDAIPY-------------SG----------------------------K----------YDGVTGVLGALEA 171 (362)
Q Consensus 143 ~Ill~sHlDTVp~-------------gG----------------------------~----------~Dg~~Gv~aal~a 171 (362)
+|+|.+||||||+ +| . .|+|+|+++++.+
T Consensus 74 ~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A 153 (410)
T TIGR01882 74 TIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTA 153 (410)
T ss_pred EEEEEEecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHH
Confidence 9999999999984 11 0 2788999999999
Q ss_pred HHHhhhc-c-cccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceee
Q 048461 172 INVLKSR-L-LAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIG 249 (362)
Q Consensus 172 ~~~L~s~-~-~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~g 249 (362)
++.|+.. . +.+++. +..+.||| .| .+....+.+ ....-+..|+. ++++. .
T Consensus 154 ~~~L~e~~~~~~g~I~----~~ft~dEE----------~g-~Ga~~l~~~------~~~~~~~~~i~------gep~g-~ 205 (410)
T TIGR01882 154 ADYLINHPEIKHGTIR----VAFTPDEE----------IG-RGAHKFDVK------DFNADFAYTVD------GGPLG-E 205 (410)
T ss_pred HHHHHhCCCCCCCCEE----EEEECccc----------CC-cCcchhhhh------hcCccEEEEeC------CCCCC-e
Confidence 9999753 2 356665 34567765 22 121111111 11111223332 22222 2
Q ss_pred EEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEE
Q 048461 250 IVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLE 329 (362)
Q Consensus 250 iv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~ 329 (362)
+.+..+|..+++|+|+|+++|++..|.. +.||+..+.+++..+...... ..++.++|.+++ +..|.||++|+++
T Consensus 206 i~~~~~g~~~~~I~v~Gk~aHa~~~~~~-g~nAi~~a~~~~~~l~~~~~~---~~t~~~~g~i~~--g~i~giPd~a~l~ 279 (410)
T TIGR01882 206 LEYETFSAAAAKITIQGNNVHPGTAKGK-MINAAQIAIDLHNLLPEDDRP---EYTEGREGFFHL--LSIDGTVEEAKLH 279 (410)
T ss_pred EEEccccceEEEEEEEEEecCcccChHH-HHHHHHHHHHHHHhcCCcCCC---ccccceeEEEEE--EeEEEecCEEEEE
Confidence 4555579999999999999999865544 599999999887766542111 122334567774 3688899999999
Q ss_pred EeeeCCCCCCCCHHHHHHHHHHHHHHHHH
Q 048461 330 IGYSHKPEEYASCEDMENGVKVLALTLAK 358 (362)
Q Consensus 330 i~~rh~p~E~~~~ed~~~gi~~l~~~l~~ 358 (362)
+|+|..|.| +.+++.+.++.+++.+.+
T Consensus 280 ~diR~~~~e--~~e~i~~~i~~i~~~~~~ 306 (410)
T TIGR01882 280 YIIRDFEKE--NFQERKELMKRIVEKMNN 306 (410)
T ss_pred EEEecCCHH--HHHHHHHHHHHHHHHHHH
Confidence 999999999 778888888888776643
No 48
>PRK08201 hypothetical protein; Provisional
Probab=99.94 E-value=1.8e-25 Score=227.24 Aligned_cols=252 Identities=16% Similarity=0.133 Sum_probs=174.9
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEccc---CcEEEeccCCCceeeeCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAV---GNIYGEISSSSRGVWIGNE 138 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~---gNvia~~~~~~~~~~~G~~ 138 (362)
..+.++++++|++|++|+|.++..- ...+|.++++||+++|+++|++ ++++.. .|+++ ++.|..
T Consensus 10 ~~~~~~~~~~l~~LV~i~Svs~~~~----~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a--------~~~~~~ 77 (456)
T PRK08201 10 RERREAHLEELKEFLRIPSISALSE----HKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYA--------DWLHAP 77 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCc----chHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEE--------EecCCC
Confidence 3466899999999999999864321 1246788999999999999995 655433 47888 876542
Q ss_pred CCCceEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccc
Q 048461 139 AELASVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIV 194 (362)
Q Consensus 139 ~~~p~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~ 194 (362)
++|+|+|.||+||||++ |..|+|+|+++++.+++.|+.. .+.+++. +..+.
T Consensus 78 -~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~----~~~~~ 152 (456)
T PRK08201 78 -GKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVK----FCIEG 152 (456)
T ss_pred -CCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEE----EEEEc
Confidence 45899999999999974 1237899999999999888632 2344454 33457
Q ss_pred cCCc--chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCC---ceeeEEEeeecceEEEEEEEeeCC
Q 048461 195 DGKN--ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEG---TSIGIVTAIAAPASIKADFEGTGG 269 (362)
Q Consensus 195 D~~G--~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~---~~~giv~~~kG~~~~~I~v~G~~a 269 (362)
||+. .-+.+.+++..-. + ..+..+ +.|++. ....++.++||..|++|+++|+++
T Consensus 153 dEE~g~~g~~~~l~~~~~~----------~---~~d~~i--------i~e~~~~~~~~~~i~~g~kG~~~~~l~v~G~~~ 211 (456)
T PRK08201 153 EEEIGSPNLDSFVEEEKDK----------L---AADVVL--------ISDTTLLGPGKPAICYGLRGLAALEIDVRGAKG 211 (456)
T ss_pred ccccCCccHHHHHHhhHHh----------c---cCCEEE--------EeCCCcCCCCCEEEEEecCCeEEEEEEEEeCCC
Confidence 7652 1111222211000 0 011111 122221 123488999999999999999998
Q ss_pred --CCCcCCCCCCCcHHHHHHHHHHHHHHhhhh---------------------------------------h--CC----
Q 048461 270 --HAGAVLMPNRNDAGLAAAELALAVEKHVLE---------------------------------------S--GS---- 302 (362)
Q Consensus 270 --HAg~~P~~~g~nAi~aaa~li~~L~~l~~~---------------------------------------~--~~---- 302 (362)
|+|..|. .+.|||..|++++.+|+++..+ . .+
T Consensus 212 ~~Hs~~~~~-~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (456)
T PRK08201 212 DLHSGLYGG-AVPNALHALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTA 290 (456)
T ss_pred CCccccccC-cCCCHHHHHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHH
Confidence 9875443 3479999999999999753100 0 00
Q ss_pred -----CCeEEEEEEEEec---CCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 303 -----IDTVGTVGILELH---PGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 303 -----~~~t~tvG~I~~g---g~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
...|+|++.|+++ +++.|+||++|++.+|+|..|++ +.+++.+.++.+++.
T Consensus 291 ~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a~~~~diR~~p~~--~~e~v~~~i~~~l~~ 349 (456)
T PRK08201 291 LERTWARPTLELNGVYGGFQGEGTKTVIPAEAHAKITCRLVPDQ--DPQEILDLIEAHLQA 349 (456)
T ss_pred HHHHHhCCcEEEEeeecCCCCCCCceEECcceEEEEEEEeCCCC--CHHHHHHHHHHHHHH
Confidence 0247899999863 23589999999999999999998 889999999887764
No 49
>PRK06446 hypothetical protein; Provisional
Probab=99.94 E-value=1.2e-25 Score=227.41 Aligned_cols=246 Identities=13% Similarity=0.056 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc---cCcEEEeccCCCceeeeCCCCCCce
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA---VGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~---~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
++++++|++|++|+|+++.+ .++.++++||+++|+++|++++..+ ..|+++ ++++ + .+|+
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~-------~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia--------~~~~-~-~~~~ 64 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATG-------EGIEETANYLKDTMEKLGIKANIERTKGHPVVYG--------EINV-G-AKKT 64 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCc-------HhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEE--------EecC-C-CCCE
Confidence 57899999999999976421 2347899999999999999987654 357999 8753 2 2589
Q ss_pred EEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhh-cccccccchhhhhcccccCC-cc
Q 048461 144 VATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKS-RLLAGIESLAKDLTSIVDGK-NI 199 (362)
Q Consensus 144 Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s-~~~~g~~~~~e~l~~~~D~~-G~ 199 (362)
|+|.||+||||.+ |..|+|+|+++++.|++.|+. ..+.+++. +..+.||| |.
T Consensus 65 vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~~~~~~i~----~~~~~dEE~g~ 140 (436)
T PRK06446 65 LLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKHKLNVNVK----FLYEGEEEIGS 140 (436)
T ss_pred EEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcCCCCCCEE----EEEEcccccCC
Confidence 9999999999963 123889999999999988753 23344444 33456765 21
Q ss_pred -hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEe--eCCCCCcCCC
Q 048461 200 -SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEG--TGGHAGAVLM 276 (362)
Q Consensus 200 -~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G--~~aHAg~~P~ 276 (362)
-....+++..- .+ +.+..+ +|... +.+. ....++.++||..|++++++| +++|++ .|.
T Consensus 141 ~g~~~~l~~~~~----------~~---~~d~vi---~E~~~-~~~~-~~~~i~~~~kG~~~~~l~v~G~~~~~Hss-~p~ 201 (436)
T PRK06446 141 PNLEDFIEKNKN----------KL---KADSVI---MEGAG-LDPK-GRPQIVLGVKGLLYVELVLRTGTKDLHSS-NAP 201 (436)
T ss_pred HhHHHHHHHHHH----------Hh---CCCEEE---ECCCC-ccCC-CCeEEEEecCeEEEEEEEEEeCCCCCCCC-CCc
Confidence 11111221100 00 111111 12111 1111 112588999999999999999 999998 565
Q ss_pred CCCCcHHHHHHHHHHHHHHhhh----------------------h------------h----------------CCCCeE
Q 048461 277 PNRNDAGLAAAELALAVEKHVL----------------------E------------S----------------GSIDTV 306 (362)
Q Consensus 277 ~~g~nAi~aaa~li~~L~~l~~----------------------~------------~----------------~~~~~t 306 (362)
. +.||+..+++++.+|++... . . ....++
T Consensus 202 ~-g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t 280 (436)
T PRK06446 202 I-VRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPT 280 (436)
T ss_pred c-CCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCc
Confidence 5 58999999999999975420 0 0 001368
Q ss_pred EEEEEEEecC---CccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 307 GTVGILELHP---GAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 307 ~tvG~I~~gg---~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
+|||.|++|. ++.|+||++|++++|+|..|++ +.+++.+.++.+++.
T Consensus 281 ~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~--~~~~v~~~l~~~~~~ 330 (436)
T PRK06446 281 CNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQ--DPYKIFELLKKHLQK 330 (436)
T ss_pred EEEeeeeccccCCCCCcEecCceEEEEEEEcCCCC--CHHHHHHHHHHHHHH
Confidence 9999998642 3679999999999999999998 889999988888654
No 50
>PRK05469 peptidase T; Provisional
Probab=99.94 E-value=7.6e-25 Score=219.59 Aligned_cols=244 Identities=15% Similarity=0.099 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHcCCCCCCCc-cccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCC-CCCce
Q 048461 67 ETLQKQIDELSTFSDTPAPS-VTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNE-AELAS 143 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~G-v~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~-~~~p~ 143 (362)
+.+++.|.+|++|+|.+..+ -+-++. ..|.++++||+++|+++|++ +++|+.+|+++ +++|+. +++|+
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~-~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~--------~~~g~~~~~~~~ 72 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPST-EGQWDLAKLLVEELKELGLQDVTLDENGYVMA--------TLPANVDKDVPT 72 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCC-HHHHHHHHHHHHHHHHcCCCeEEECCCeEEEE--------EecCCCCCCCCe
Confidence 56899999999999975332 222444 45799999999999999995 88888899999 887752 23589
Q ss_pred EEEEecccCCCCC-----------------------------------------------Cc----cccHHHHHHHHHHH
Q 048461 144 VATGSHIDAIPYS-----------------------------------------------GK----YDGVTGVLGALEAI 172 (362)
Q Consensus 144 Ill~sHlDTVp~g-----------------------------------------------G~----~Dg~~Gv~aal~a~ 172 (362)
|+|.|||||||.. |. .|+|.|+++++.++
T Consensus 73 i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~ 152 (408)
T PRK05469 73 IGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTAL 152 (408)
T ss_pred EEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHH
Confidence 9999999999741 22 68999999999999
Q ss_pred HHhhhc--ccccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeE
Q 048461 173 NVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGI 250 (362)
Q Consensus 173 ~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~gi 250 (362)
+.|+.. .+.+++. +..+.|||. | .+...++.+ ....-+.+|+..+ + ...+
T Consensus 153 ~~l~~~~~~~~g~v~----~~f~~dEE~----------g-~Ga~~~~~~------~~~~~~~~~~~~~------~-~g~~ 204 (408)
T PRK05469 153 EYLIAHPEIKHGDIR----VAFTPDEEI----------G-RGADKFDVE------KFGADFAYTVDGG------P-LGEL 204 (408)
T ss_pred HHHHhCCCCCCCCEE----EEEeccccc----------C-CCHHHhhhh------hcCCcEEEEecCC------C-cceE
Confidence 998743 2456665 344577642 2 121111111 0111112333221 1 1125
Q ss_pred EEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCC--CCeEEEEEEEEecCCccceecCeEEE
Q 048461 251 VTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGS--IDTVGTVGILELHPGAINSIPIKSQL 328 (362)
Q Consensus 251 v~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~--~~~t~tvG~I~~gg~a~NvVP~~a~l 328 (362)
..+++|..+|+|+++|+++|+++.|+. +.|||.++++++..|+++..+... ...++|+|.|++ .|++|++
T Consensus 205 ~~~~~g~~~~~i~v~Gk~~Ha~~~p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~g-------gp~~~~i 276 (408)
T PRK05469 205 EYENFNAASAKITIHGVNVHPGTAKGK-MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKG-------TVEEAEL 276 (408)
T ss_pred EeccCceeEEEEEEeeecCCCCCCccc-ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEE-------ccceEEE
Confidence 566799999999999999998877886 599999999999998876432111 123467777774 3899999
Q ss_pred EEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 329 EIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 329 ~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
++|+|..|.| +.+.+.+.++.+++.+.
T Consensus 277 ~~diR~~~~e--~~e~i~~~i~~~~~~~~ 303 (408)
T PRK05469 277 SYIIRDFDRE--GFEARKALMQEIAKKVN 303 (408)
T ss_pred EEEEecCCHH--HHHHHHHHHHHHHHHHH
Confidence 9999999998 77888888888887764
No 51
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.93 E-value=1e-24 Score=223.57 Aligned_cols=217 Identities=16% Similarity=0.139 Sum_probs=154.8
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCC--CCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNE--AEL 141 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~--~~~ 141 (362)
.+.++++++|++|++||++ |++|.++++||.++++++|+++++|+.+|+++ +++++. .+.
T Consensus 7 ~~~~~~~~~l~~Lv~ips~----------S~~e~~~~~~l~~~~~~~G~~~~~d~~gnvi~--------~~~~~~g~~~~ 68 (485)
T PRK15026 7 LSPQPLWDIFAKICSIPHP----------SYHEEQLAEYIVGWAKEKGFHVERDQVGNILI--------RKPATAGMENR 68 (485)
T ss_pred cCHHHHHHHHHHHhCCCCC----------CCCHHHHHHHHHHHHHhCCCEEEEEecCeEEE--------EEcCCCCCCCC
Confidence 4678999999999999986 45678999999999999999999999999999 765421 234
Q ss_pred ceEEEEecccCCCCCC-------------------------c---cccHHHHHHHHHHHHHhhhcccccccchhhhhccc
Q 048461 142 ASVATGSHIDAIPYSG-------------------------K---YDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSI 193 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG-------------------------~---~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~ 193 (362)
|.|+|.|||||||+++ . .|++.|+++++.+++.. ....+.+. +..+
T Consensus 69 ~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l~~~--~~~~~~i~----~l~t 142 (485)
T PRK15026 69 KPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADE--NVVHGPLE----VLLT 142 (485)
T ss_pred CEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHHHhC--CCCCCCEE----EEEE
Confidence 8899999999999753 1 26778888887776432 22244444 3446
Q ss_pred ccCC-cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeE--------------EEee----
Q 048461 194 VDGK-NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGI--------------VTAI---- 254 (362)
Q Consensus 194 ~D~~-G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~gi--------------v~~~---- 254 (362)
.||| |......+......+ +.++ ++|++ ....+ ...+
T Consensus 143 ~dEE~G~~ga~~l~~~~~~~---------------~~~i--------~~e~~-~~g~l~~g~~G~~~~~~~~~~~r~~~~ 198 (485)
T PRK15026 143 MTEEAGMDGAFGLQSNWLQA---------------DILI--------NTDSE-EEGEIYMGCAGGIDFTSNLHLDREAVP 198 (485)
T ss_pred cccccCcHhHHHhhhccCCc---------------CEEE--------EeCCC-CCCeEEEeCCCcceEEEEEEEEEEecC
Confidence 7764 222222222111111 1111 22222 11112 2233
Q ss_pred ecceEEEEEEEe-eCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeee
Q 048461 255 AAPASIKADFEG-TGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYS 333 (362)
Q Consensus 255 kG~~~~~I~v~G-~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~r 333 (362)
+|..+|+|+++| +++|||..|+.++.|||..+++++.++. ..++++++.|+| |.+.|+||++|++.+++|
T Consensus 199 ~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~--------~~~~~~v~~i~G-G~~~NaIp~~a~a~i~~~ 269 (485)
T PRK15026 199 AGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA--------EELDLRLIDFNG-GTLRNAIPREAFATIAVA 269 (485)
T ss_pred CCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH--------hhCCeEEEEEeC-CCccCCCCCCcEEEEEEC
Confidence 688999999999 9999998898865599999999998843 136899999996 689999999999999998
Q ss_pred CCCC
Q 048461 334 HKPE 337 (362)
Q Consensus 334 h~p~ 337 (362)
....
T Consensus 270 ~~~~ 273 (485)
T PRK15026 270 ADKV 273 (485)
T ss_pred hhHH
Confidence 5443
No 52
>PRK09104 hypothetical protein; Validated
Probab=99.93 E-value=3.8e-24 Score=218.08 Aligned_cols=255 Identities=9% Similarity=0.006 Sum_probs=175.8
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc---cCcEEEeccCCCceeeeCCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA---VGNIYGEISSSSRGVWIGNEA 139 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~---~gNvia~~~~~~~~~~~G~~~ 139 (362)
..+.++++++|++|++|+|.++. ..+..++.++++||+++|+++|+++++.+ ..|+++ +++|.++
T Consensus 13 ~~~~~~~~~~L~~lv~i~Svs~~----~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a--------~~~g~~~ 80 (464)
T PRK09104 13 DANLDASLERLFALLRIPSISTD----PAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVA--------HHEGPTG 80 (464)
T ss_pred HHhHHHHHHHHHHHhcCCCCCCC----ccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEE--------EecCCCC
Confidence 44678999999999999997531 01124467889999999999999887532 357999 8876433
Q ss_pred CCceEEEEecccCCCCC----------------C------c-----cccHHHHHHHHHHHHHhhhc--ccccccchhhhh
Q 048461 140 ELASVATGSHIDAIPYS----------------G------K-----YDGVTGVLGALEAINVLKSR--LLAGIESLAKDL 190 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp~g----------------G------~-----~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l 190 (362)
+.|+|+|.||+||||.+ + . .|+|+|+++++.+++.|+.. .+.+++. +
T Consensus 81 ~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~----~ 156 (464)
T PRK09104 81 DAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVT----I 156 (464)
T ss_pred CCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEE----E
Confidence 46899999999999853 1 1 27888999999999998752 2445554 3
Q ss_pred cccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccC---CceeeEEEeeecceEEEEEEEe-
Q 048461 191 TSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKE---GTSIGIVTAIAAPASIKADFEG- 266 (362)
Q Consensus 191 ~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~---~~~~giv~~~kG~~~~~I~v~G- 266 (362)
..+.||+. |..+...++.+.. ++-..+.. .+.|+. +....++.++||..|++|+++|
T Consensus 157 ~~~~dEE~----------g~~g~~~~l~~~~-~~~~~d~~--------iv~E~~~~~~~~~~i~~~~kG~~~~~l~v~g~ 217 (464)
T PRK09104 157 LFEGEEES----------GSPSLVPFLEANA-EELKADVA--------LVCDTGMWDRETPAITTSLRGLVGEEVTITAA 217 (464)
T ss_pred EEECcccc----------CCccHHHHHHhhH-HhcCCCEE--------EEeCCCCCCCCCeEEEeecCCeEEEEEEEEeC
Confidence 34566542 2111111111100 00001111 112221 1123478899999999999999
Q ss_pred -eCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhh-----------------------h--------------CC------
Q 048461 267 -TGGHAGAVLMPNRNDAGLAAAELALAVEKHVLE-----------------------S--------------GS------ 302 (362)
Q Consensus 267 -~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~-----------------------~--------------~~------ 302 (362)
+++||+..|.. +.||+..+++++.+|++...+ . .+
T Consensus 218 ~~~~Hss~~~~~-g~nai~~~~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (464)
T PRK09104 218 DRDLHSGLFGGA-AANPIRVLTRILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGR 296 (464)
T ss_pred CCCccccccCCc-cCCHHHHHHHHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccH
Confidence 78999755664 699999999999998753100 0 00
Q ss_pred -------CCeEEEEEEEEecC---CccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 303 -------IDTVGTVGILELHP---GAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 303 -------~~~t~tvG~I~~gg---~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
..+++|++.|+++. ++.|+||++|++++|+|..|++ +++++.+.++..++.
T Consensus 297 ~~~~~~~~~~t~~i~~i~gg~~~~~~~nvvP~~~~~~~diR~~p~~--~~~~v~~~i~~~l~~ 357 (464)
T PRK09104 297 SVLEQIWSRPTCEINGIWGGYTGEGFKTVIPAEASAKVSFRLVGGQ--DPAKIREAFRAYVRA 357 (464)
T ss_pred HHHHHHhhCCeEEEeccccCCCCCCCccEecCceEEEEEEEeCCCC--CHHHHHHHHHHHHHH
Confidence 02578999999641 3579999999999999999998 889998888877653
No 53
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=99.93 E-value=1.4e-24 Score=212.04 Aligned_cols=221 Identities=16% Similarity=0.179 Sum_probs=160.2
Q ss_pred HHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEeccc
Q 048461 72 QIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSHID 151 (362)
Q Consensus 72 ~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlD 151 (362)
+|++|++|+|+ |++|.++++||+++|+++|++++.+..+|+++ .. +. ++|+|+|.||+|
T Consensus 2 ~l~~lv~i~s~----------s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~--------~~-~~--~~~~i~~~~H~D 60 (336)
T TIGR01902 2 LLKDLLEIYSP----------SGKEANAAKFLEEISKDLGLKLIIDDAGNFIL--------GK-GD--GHKKILLAGHVD 60 (336)
T ss_pred hHHHHhcCCCC----------CcchHHHHHHHHHHHHHcCCEEEECCCCcEEE--------Ee-CC--CCceEEEEcccc
Confidence 68999999996 34688999999999999999998888899988 65 32 248999999999
Q ss_pred CCCCC-------------CccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcchHHHHHHHcCCCCccccch
Q 048461 152 AIPYS-------------GKYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLS 218 (362)
Q Consensus 152 TVp~g-------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~ 218 (362)
|||+. |..|+|.|+++++.+++.|+.. .+++. +..+.||++ |..+....+.
T Consensus 61 ~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~--~~~i~----~~~~~dEE~----------g~~G~~~~~~ 124 (336)
T TIGR01902 61 TVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEK--GIKVI----VSGLVDEES----------SSKGAREVID 124 (336)
T ss_pred ccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhC--CCcEE----EEEEeCccc----------CCccHHHHHh
Confidence 99853 3468999999999999988742 23443 334567643 2222221221
Q ss_pred hhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHH-hh
Q 048461 219 SVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEK-HV 297 (362)
Q Consensus 219 ~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~-l~ 297 (362)
.. ... + . .+.|+++. ..++.+++|..|++++++|+++|++ .| .||+..+.+++.+|.+ +.
T Consensus 125 ~~-----~~~-~-~------ii~ept~~-~~i~~~~kG~~~~~v~~~G~~~Hss-~~----~~ai~~~~~~~~~l~~~~~ 185 (336)
T TIGR01902 125 KN-----YPF-Y-V------IVGEPSGA-EGITLGYKGSLQLKIMCEGTPFHSS-SA----GNAAELLIDYSKKIIEVYK 185 (336)
T ss_pred hc-----CCC-E-E------EEecCCCC-cceeeeeeeEEEEEEEEEecCcccC-CC----hhHHHHHHHHHHHHHHHhc
Confidence 10 001 1 1 12333321 2477899999999999999999987 44 2599999999999873 32
Q ss_pred hhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHH
Q 048461 298 LESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKV 351 (362)
Q Consensus 298 ~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~ 351 (362)
.+...+..+++++.+++ |.+.|+||++|++++|+|..|.+ +.+++.+.++.
T Consensus 186 ~~~~~~~~~~~~~~i~g-g~~~nvIP~~a~~~idiR~~p~~--~~~~~~~~i~~ 236 (336)
T TIGR01902 186 QPENYDKPSIVPTIIRF-GESYNDTPAKLELHFDLRYPPNN--KPEEAIKEITD 236 (336)
T ss_pred cccCCCCCcceeEEEEc-cCCCcCCCceEEEEEEEeeCCCC--CHHHHHHHHHh
Confidence 22111235789999996 57999999999999999999999 67777665553
No 54
>PRK07079 hypothetical protein; Provisional
Probab=99.92 E-value=2.1e-23 Score=212.98 Aligned_cols=253 Identities=10% Similarity=0.008 Sum_probs=166.0
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHH----HHHHHHCCCeEEEcc------cCcEEEeccCCCcee
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYI----KNLMGISGLSVREDA------VGNIYGEISSSSRGV 133 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l----~~~L~~~Gl~v~~d~------~gNvia~~~~~~~~~ 133 (362)
++.++++++|++|++|+|.++.. .++.++++|+ .++|+++|+++++.+ ..||++ +
T Consensus 14 ~~~~~~~~~L~~LV~ipSvs~~~-------~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva--------~ 78 (469)
T PRK07079 14 FDSGAFFADLARRVAYRTESQNP-------DRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIA--------E 78 (469)
T ss_pred hccHHHHHHHHHHhccCCCCCCc-------ccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEE--------E
Confidence 34468999999999999986421 2344566666 458999999987522 347999 8
Q ss_pred eeCCCCCCceEEEEecccCCCCCC-----------------------ccccHHHHHHHHHHHHHhhh---cccccccchh
Q 048461 134 WIGNEAELASVATGSHIDAIPYSG-----------------------KYDGVTGVLGALEAINVLKS---RLLAGIESLA 187 (362)
Q Consensus 134 ~~G~~~~~p~Ill~sHlDTVp~gG-----------------------~~Dg~~Gv~aal~a~~~L~s---~~~~g~~~~~ 187 (362)
+.+.. ++|+|+|.||+||||+++ ..|+|+|+++++.|++.|.. ..+.+++.
T Consensus 79 ~~~~~-~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~-- 155 (469)
T PRK07079 79 RIEDD-ALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVK-- 155 (469)
T ss_pred eCCCC-CCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEE--
Confidence 75532 358999999999999632 23789999999999998752 22344454
Q ss_pred hhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEee
Q 048461 188 KDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGT 267 (362)
Q Consensus 188 e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~ 267 (362)
+..+.|||. |..+...++.... .....+..+- .+.+ ..+ .....+++++||..|++|+++|+
T Consensus 156 --~~~~~dEE~----------g~~G~~~l~~~~~-~~~~~d~~iv--~e~~-~~~--~~~~~i~~g~kG~~~~~v~v~G~ 217 (469)
T PRK07079 156 --LLIEMGEEI----------GSPGLAEVCRQHR-EALAADVLIA--SDGP-RLS--AERPTLFLGSRGAVNFRLRVNLR 217 (469)
T ss_pred --EEEECcccc----------CCccHHHHHHHhH-HhcCCCEEEE--eCCC-ccC--CCCeEEEEecceEEEEEEEEeeC
Confidence 344577653 2211111111100 0000111110 0111 011 12234889999999999999998
Q ss_pred --CCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhh---------------------hC-----------------------
Q 048461 268 --GGHAGAVLMPNRNDAGLAAAELALAVEKHVLE---------------------SG----------------------- 301 (362)
Q Consensus 268 --~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~---------------------~~----------------------- 301 (362)
+.||+ .+.....||+..+++++.++.+...+ ..
T Consensus 218 ~~~~hs~-~~~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (469)
T PRK07079 218 DGAHHSG-NWGGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAE 296 (469)
T ss_pred CCCCCCC-ccccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHH
Confidence 55765 32222369999999999988542100 00
Q ss_pred --CCCeEEEEEEEEecC--CccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 302 --SIDTVGTVGILELHP--GAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 302 --~~~~t~tvG~I~~gg--~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
...+++|++.|++|. +..|+||++|++++|+|..|++ +.+++.+.++.+++.
T Consensus 297 ~~~~~~t~nv~~i~gG~~~~~~NvVP~~a~~~vdiR~~P~~--~~e~v~~~l~~~i~~ 352 (469)
T PRK07079 297 RVFGWNTLEVLAFKTGNPDAPVNAIPGSARAVCQLRFVVGT--DWENLAPHLRAHLDA 352 (469)
T ss_pred HHhhCCceEEEeeecCCCCCcceEecCceEEEEEEEcCCCC--CHHHHHHHHHHHHHh
Confidence 012478999999742 2589999999999999999999 899999999988765
No 55
>PRK07205 hypothetical protein; Provisional
Probab=99.90 E-value=3.6e-22 Score=202.53 Aligned_cols=252 Identities=15% Similarity=0.098 Sum_probs=157.6
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCc-EEEeccCCCceeeeCCCCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGN-IYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gN-via~~~~~~~~~~~G~~~~~p~ 143 (362)
+.++++++|++|++|+|.++++-+...+..+-.++.+|+.++|+++|+++++++.++ +++ ++ |. +.|+
T Consensus 9 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--------~~-g~--~~~~ 77 (444)
T PRK07205 9 VQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYA--------EI-GQ--GEEL 77 (444)
T ss_pred hHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEE--------Ee-cC--CCcE
Confidence 678999999999999997643211111223336778999999999999998765444 555 55 43 2478
Q ss_pred EEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc-
Q 048461 144 VATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN- 198 (362)
Q Consensus 144 Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G- 198 (362)
|+|.||+||||+++ ..|+|+|++++|.|++.|+... +.+++. +..+.|||.
T Consensus 78 lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~----l~~~~dEE~g 153 (444)
T PRK07205 78 LAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIR----FIFGTDEETL 153 (444)
T ss_pred EEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEE----EEEECCcccC
Confidence 99999999999852 2378999999999999987543 344554 445678763
Q ss_pred chHHHHHHHc------CCCCccc-cchhhhhccCCceeEEEeecccCcccccCCcee---------eEEE---eeecc--
Q 048461 199 ISFLDAARSA------GYAKEHN-DLSSVFLKKGSYFAFVELHIEQGPILEKEGTSI---------GIVT---AIAAP-- 257 (362)
Q Consensus 199 ~~~~e~~ee~------G~~~~~~-~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~---------giv~---~~kG~-- 257 (362)
......+.+. +..++.. .+. ....+... +.+. .++++. +++. .++|.
T Consensus 154 ~~g~~~~~~~~~~~~~~~~~~~~~~v~---~~ekG~~~-~~i~--------~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 221 (444)
T PRK07205 154 WRCMNRYNEVEEQATMGFAPDSSFPLT---YAEKGLLQ-AKLV--------GPGSDQLELEVGQAFNVVPAKASYQGPKL 221 (444)
T ss_pred cccHHHHHhCCCCCCeeECCCCCCceE---EEEeceEE-EEEE--------eCCccceEEecCCcccccCceeEEEecCH
Confidence 1111111110 1111000 000 00000000 0111 111100 0000 02222
Q ss_pred ----------------eEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhh------hhh--------------C
Q 048461 258 ----------------ASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHV------LES--------------G 301 (362)
Q Consensus 258 ----------------~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~------~~~--------------~ 301 (362)
.+++|+++|+++|++ .|+. +.|||..+++++.++++.. ... .
T Consensus 222 ~~l~~~~~~~g~~~~~~~~~v~v~G~~~Hss-~p~~-g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (444)
T PRK07205 222 EAVKKELDKLGFEYVVKENEVTVLGKSVHAK-DAPQ-GINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIED 299 (444)
T ss_pred HHHHHHHHhcCceEeecCcEEEEEeEEcccC-CCcc-CcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccC
Confidence 344999999999997 6764 6999999999999887531 100 0
Q ss_pred --CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 302 --SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 302 --~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
...+++|+|. .|+||++|++++|+|..|++ +.+++.+.++.+++
T Consensus 300 ~~~~~~t~nvg~-------~nvvP~~a~~~ld~R~~p~~--~~e~v~~~i~~~~~ 345 (444)
T PRK07205 300 EPSGKLSFNIAG-------LTITKEKSEIRIDIRIPVLA--DKEKLVQQLSQKAQ 345 (444)
T ss_pred CCcCCceEEeEE-------EEEECCEEEEEEEEeCCCCC--CHHHHHHHHHHHHH
Confidence 0134566654 58999999999999999999 88999999988765
No 56
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=99.90 E-value=1.1e-21 Score=195.18 Aligned_cols=250 Identities=24% Similarity=0.224 Sum_probs=182.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc-Cc-EEEeccCCCceeeeCCCCCCc
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV-GN-IYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~-gN-via~~~~~~~~~~~G~~~~~p 142 (362)
..++++++=++|-++|- ++++|.++++||+++|+++|+++..... ++ ++| +++|+.+ +|
T Consensus 10 ~~~~l~~~rr~lH~~PE----------L~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva--------~~~~g~~-g~ 70 (392)
T COG1473 10 LKDELIEWRRDLHEHPE----------LGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVA--------TLKGGKP-GP 70 (392)
T ss_pred hhHHHHHHHHHHhhCCc----------cchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEE--------EEcCCCC-CC
Confidence 34556666666666554 5899999999999999999999443332 24 888 9987653 57
Q ss_pred eEEEEecccCCCCC------------C-----ccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcchHHH
Q 048461 143 SVATGSHIDAIPYS------------G-----KYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNISFLD 203 (362)
Q Consensus 143 ~Ill~sHlDTVp~g------------G-----~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e 203 (362)
+|.|+++||.+|.- | .+|+. .+++|.+++.|++. .+.|++.+ ...+-|+|...+.
T Consensus 71 tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD~H--ta~lLgaA~~L~~~~~~~~Gtv~~----ifQPAEE~~~Ga~ 144 (392)
T COG1473 71 TIALRADMDALPIQEETGLPFASKNPGVMHACGHDGH--TAILLGAALALAEHKDNLPGTVRL----IFQPAEEGGGGAK 144 (392)
T ss_pred EEEEEeecccCccccccCCCcccCCCCCcccCCchHH--HHHHHHHHHHHHhhhhhCCcEEEE----EecccccccccHH
Confidence 99999999999952 1 13444 34456677777643 67888773 3345555432233
Q ss_pred HHHHcCCCCccccchhhhhccCCceeEEEeecccC-cccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcH
Q 048461 204 AARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQG-PILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDA 282 (362)
Q Consensus 204 ~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g-~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nA 282 (362)
. +++++.++.. +++++.+|+.++ |+-. -...-|.. ..+...|+|+|+|+++|+ +.|+. ++||
T Consensus 145 ~-----------mi~~G~~~~~-vD~v~g~H~~p~~~~g~-v~~~~G~~--~aa~d~~~i~~~GkggH~-a~Ph~-~~d~ 207 (392)
T COG1473 145 A-----------MIEDGVFDDF-VDAVFGLHPGPGLPVGT-VALRPGAL--MAAADEFEITFKGKGGHA-AAPHL-GIDA 207 (392)
T ss_pred H-----------HHhcCCcccc-ccEEEEecCCCCCCCce-EEeecccc--eeecceEEEEEEeCCccc-CCccc-ccCH
Confidence 3 3444433323 899999999876 4211 11122221 478899999999999998 58986 6999
Q ss_pred HHHHHHHHHHHHHhhhhhCC--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 283 GLAAAELALAVEKHVLESGS--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 283 i~aaa~li~~L~~l~~~~~~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
+.+++.++..|+.+..+... ...++++|++++ |++.|||||++++++.+|....| ..+.+.+-++.+++-+...
T Consensus 208 i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~a-G~a~NVIpd~A~l~gtvR~~~~~--~~~~~~~~i~~ia~g~a~~ 283 (392)
T COG1473 208 LVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEA-GTAANVIPDSAELEGTIRTFSDE--VREKLEARIERIAKGIAAA 283 (392)
T ss_pred HHHHHHHHHHHHHHHhcccCCccCeEEEEEEecC-CCcCCcCCCeeEEEEEeecCCHH--HHHHHHHHHHHHHHHHHHH
Confidence 99999999999998766432 246999999997 58899999999999999999888 7799999999988877654
No 57
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.90 E-value=8.6e-22 Score=201.02 Aligned_cols=265 Identities=12% Similarity=0.083 Sum_probs=163.9
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccc--cCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRV--LHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~--~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
.+.++++++|++|++|+|.++.....+ .+..++.++++|++++++++|++++.. .|+++ ++...+ +.
T Consensus 11 ~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~--~n~~~--------~~~~~~-~~ 79 (466)
T PRK07318 11 KRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNV--DNYAG--------HIEYGE-GE 79 (466)
T ss_pred HhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEe--cCccc--------eEEECC-CC
Confidence 466889999999999999864321111 113457889999999999999988743 58887 554222 24
Q ss_pred ceEEEEecccCCCCCC--------------------ccccHHHHHHHHHHHHHhhhccc--ccccchhhhhcccccCC-c
Q 048461 142 ASVATGSHIDAIPYSG--------------------KYDGVTGVLGALEAINVLKSRLL--AGIESLAKDLTSIVDGK-N 198 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG--------------------~~Dg~~Gv~aal~a~~~L~s~~~--~g~~~~~e~l~~~~D~~-G 198 (362)
|+|+|.||+||||++. ..|+|+|+++++.|++.|+...+ .+++. +..+.||| |
T Consensus 80 ~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~----l~~~~DEE~g 155 (466)
T PRK07318 80 EVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVR----FIVGTDEESG 155 (466)
T ss_pred CEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEE----EEEEcccccC
Confidence 7899999999999752 23789999999999999975432 44554 44567876 2
Q ss_pred chHHHHHHHcCCCCccccchhhh---h-ccCCceeEEEe--------------ecccCccc--ccCCceee---------
Q 048461 199 ISFLDAARSAGYAKEHNDLSSVF---L-KKGSYFAFVEL--------------HIEQGPIL--EKEGTSIG--------- 249 (362)
Q Consensus 199 ~~~~e~~ee~G~~~~~~~i~~~~---~-~~~~i~a~~el--------------hie~g~vl--e~~~~~~g--------- 249 (362)
......+-+....++..+..... . .+... ..+.+ .++.|..- .+......
T Consensus 156 ~~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~ 234 (466)
T PRK07318 156 WKCMDYYFEHEEAPDFGFSPDAEFPIINGEKGI-TTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDL 234 (466)
T ss_pred chhHHHHHHhCCCCCEEEEeCCCCcEEEEEeee-EEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHH
Confidence 22222222211111000000000 0 00000 00000 00111000 00000000
Q ss_pred --------EEEeeecce-----EEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHh----------hh--------
Q 048461 250 --------IVTAIAAPA-----SIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKH----------VL-------- 298 (362)
Q Consensus 250 --------iv~~~kG~~-----~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l----------~~-------- 298 (362)
+..++||.. |++|+++|+++|++ .|+. |.|||..|++++.+|+.. ..
T Consensus 235 ~~~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s-~p~~-g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 312 (466)
T PRK07318 235 IAAFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGS-TPEK-GVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRG 312 (466)
T ss_pred HHHHHHHHhhcCceEEEEecCCEEEEEEEeeEcccC-CCcc-CccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCc
Confidence 112466654 89999999999976 8886 699999999999998741 00
Q ss_pred ------hhC--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 299 ------ESG--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 299 ------~~~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
... .+..++|+|.|++++ .. +|++++|+|+.|++ +.+++.+.++.+++
T Consensus 313 ~~~~~~~~~~~~g~~t~nvg~i~gg~-~~-----~~~~~iDiR~~p~~--~~~~v~~~i~~~~~ 368 (466)
T PRK07318 313 EKLGIAYEDDVMGDLTMNVGVFSFDE-EK-----GGTLGLNFRYPVGT--DFEKIKAKLEKLIG 368 (466)
T ss_pred ccCCCcccCCCccCeEEEeeEEEEec-Cc-----EEEEEEEEeCCCCC--CHHHHHHHHHHHHH
Confidence 001 124689999999742 21 79999999999998 78988888887754
No 58
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.89 E-value=3.6e-21 Score=196.60 Aligned_cols=264 Identities=14% Similarity=0.050 Sum_probs=163.6
Q ss_pred CHHHHHHHHHHHHcCCCCCCCcccc--ccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCc
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTR--VLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r--~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
+.++++++|.+|++|||.++.+... -.+..++.++.+|+.++|+++|++++.. .|.++ ++.+.+ +.|
T Consensus 11 ~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~--~~~~~--------~~~~~~-~~~ 79 (466)
T TIGR01886 11 RKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNF--DNYAG--------HVEYGA-GDE 79 (466)
T ss_pred hHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEe--cCCce--------eEEecC-CCC
Confidence 5678999999999999985432111 1134678889999999999999998753 36656 443322 347
Q ss_pred eEEEEecccCCCCCC--------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc-c
Q 048461 143 SVATGSHIDAIPYSG--------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN-I 199 (362)
Q Consensus 143 ~Ill~sHlDTVp~gG--------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G-~ 199 (362)
+|+|.||+||||++. ..|+|+++++++.|++.|+... +.+++. +....||+. .
T Consensus 80 ~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~g~ 155 (466)
T TIGR01886 80 RLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIR----FVVGTNEETGW 155 (466)
T ss_pred EEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEE----EEEECccccCc
Confidence 999999999999852 2378889999999999987543 344554 334466653 1
Q ss_pred hHHHHHHHcCCCCccccchhhhh----ccCCceeEEEeecc---------------cCcccccCCceeeEE---------
Q 048461 200 SFLDAARSAGYAKEHNDLSSVFL----KKGSYFAFVELHIE---------------QGPILEKEGTSIGIV--------- 251 (362)
Q Consensus 200 ~~~e~~ee~G~~~~~~~i~~~~~----~~~~i~a~~elhie---------------~g~vle~~~~~~giv--------- 251 (362)
.....+-+.+..++..++....+ -.... ..+++... ...-+.+.... .++
T Consensus 156 ~g~~~~~~~~~~~d~~~~~d~~~~~~~ge~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~i~~~~~~~~~ 233 (466)
T TIGR01886 156 VDMDYYFKHEETPDFGFSPDAEFPIINGEKGN-FTLELSFKGDNKGDYVLDSFKAGLAENMVPQVAR-AVISGPDAEALK 233 (466)
T ss_pred ccHHHHHhcCcCCCEEEECCCCceeEEEecce-EEEEEEEecCCCCceeEEEEEcCCcCCccCCeeE-EEEecCCHHHHH
Confidence 11222222232222111110000 00000 01111111 00000011101 011
Q ss_pred ------Eeeecce---------EEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHH----------HHhhhh-------
Q 048461 252 ------TAIAAPA---------SIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAV----------EKHVLE------- 299 (362)
Q Consensus 252 ------~~~kG~~---------~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L----------~~l~~~------- 299 (362)
.+++|.. |++|+++|+++|++ .|+. |+|||..|++++.++ +.+...
T Consensus 234 ~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s-~P~~-G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 311 (466)
T TIGR01886 234 AAYESFLADKASLDGSFEINDESATIVLIGKGAHGA-APQV-GINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYG 311 (466)
T ss_pred HHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccC-CCCC-CcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCc
Confidence 1355543 89999999999987 7886 699999999988872 222110
Q ss_pred -------hC--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 300 -------SG--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 300 -------~~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
.+ ...+++|+|.|+++ .. | ++|++++|+|..|+| +.|++.+.++.++.
T Consensus 312 ~~~~~~~~~~~~g~~S~nvgvI~gG-~~-~---~~~~l~iD~R~~Pge--~~eev~~eI~~~i~ 368 (466)
T TIGR01886 312 EKLGIAFHDELMGDLAMNAGMFDFD-HA-N---KESKLLLNFRYPQGT--SPETMQKQVLDKFG 368 (466)
T ss_pred ccCCCcccccCcCceEEEeEEEEEe-cC-C---ceEEEEEEEecCCCC--CHHHHHHHHHHHHh
Confidence 01 13578999999974 33 4 899999999999999 88999998887665
No 59
>PRK06156 hypothetical protein; Provisional
Probab=99.88 E-value=8.6e-21 Score=196.32 Aligned_cols=301 Identities=14% Similarity=0.079 Sum_probs=181.8
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhcCCchhhhhhhhccCCcccccCCcccccccccccCHHHHHHHHHHHHcCCCCCCCcc
Q 048461 8 SHSLYHLLLVPVIFCSISAIYAKANEDTTIRTMEAFSGYPIHESNSFVTNLVSSLSVDTETLQKQIDELSTFSDTPAPSV 87 (362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lv~i~s~~~~Gv 87 (362)
|.|++.+|..+|++.++|+..+. ++++-|--++....+.+ ..+.++++++|++|++|+|++++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~lv~i~S~~~~~~ 66 (520)
T PRK06156 2 SRSLKKLLAALLLLASLSAATQA---AAATLTKPQLDALLYAR------------LKYGAAAIESLRELVAFPTVRVEGV 66 (520)
T ss_pred cchHHHHHHHHHHHHHhhhhhhh---hhhhccccccchhHHhh------------hhhHHHHHHHHHHhcCcCcccCCCC
Confidence 57899999999888888873221 22222332332222222 2467899999999999999865432
Q ss_pred ccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEE--EeccCCCceeeeCCCCCCceEEEEecccCCCCCC--------
Q 048461 88 TRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIY--GEISSSSRGVWIGNEAELASVATGSHIDAIPYSG-------- 157 (362)
Q Consensus 88 ~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvi--a~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~gG-------- 157 (362)
.-. -..+..+..+||.++|+++|++++. .+|++ + +++|.+ .|+|+|.|||||||++.
T Consensus 67 ~~~-e~~~~~~~~~~l~~~l~~~G~~~~~--~~~~v~~~--------~~~g~~--~~~l~l~gH~DvVp~~~~~W~~~~~ 133 (520)
T PRK06156 67 PQH-ENPEFIGFKKLLKSLARDFGLDYRN--VDNRVLEI--------GLGGSG--SDKVGILTHADVVPANPELWVLDGT 133 (520)
T ss_pred Ccc-CCccHHHHHHHHHHHHHHCCCeEEe--cCCeEEEE--------EecCCC--CCeEEEEEecCccCCCCccCccCCc
Confidence 100 0112245679999999999998853 46754 5 766542 47999999999999741
Q ss_pred ------------------ccccHHHHHHHHHHHHHhhhccc--ccccchhhhhcccccCCc-chHHHHHHHcCCCCccc-
Q 048461 158 ------------------KYDGVTGVLGALEAINVLKSRLL--AGIESLAKDLTSIVDGKN-ISFLDAARSAGYAKEHN- 215 (362)
Q Consensus 158 ------------------~~Dg~~Gv~aal~a~~~L~s~~~--~g~~~~~e~l~~~~D~~G-~~~~e~~ee~G~~~~~~- 215 (362)
..|+|.|+++++.|++.|++... .+++. +..+.|||. ......+.+.+..++..
T Consensus 134 ~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~g~~G~~~~~~~~~~~~~~~ 209 (520)
T PRK06156 134 RLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIE----LLVYTTEETDGDPLKYYLERYTPPDYNI 209 (520)
T ss_pred cCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEE----EEEecccccCchhHHHHHHhcCCCCeEE
Confidence 13678899999999998875432 34454 345678763 32333333333222110
Q ss_pred --------cchhhhhccCCceeE-E------------E-eecccCcc--cccCCcee-------------------eEEE
Q 048461 216 --------DLSSVFLKKGSYFAF-V------------E-LHIEQGPI--LEKEGTSI-------------------GIVT 252 (362)
Q Consensus 216 --------~i~~~~~~~~~i~a~-~------------e-lhie~g~v--le~~~~~~-------------------giv~ 252 (362)
++.+. ....+ + . .++.-|.. ..++.... ..+.
T Consensus 210 ~~D~~~~~~~~E~-----~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (520)
T PRK06156 210 TLDAEYPVVTAEK-----GWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVK 284 (520)
T ss_pred eeCCCCceEEEec-----ceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 01110 00000 0 0 00000000 00000000 0011
Q ss_pred eeecce---------EEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhh------------------------
Q 048461 253 AIAAPA---------SIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLE------------------------ 299 (362)
Q Consensus 253 ~~kG~~---------~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~------------------------ 299 (362)
+++|.. |++|+++|+++|++ .|+. +.|||..+++++.+|+++...
T Consensus 285 ~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS-~P~~-G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g 362 (520)
T PRK06156 285 RHGGGFSIDFKRDGKDVTITVTGKSAHSS-TPES-GVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFG 362 (520)
T ss_pred hcccCceEEEEEcCCeEEEEEEeEECCCC-CCCC-CccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCC
Confidence 122333 99999999999987 7875 699999999999999762100
Q ss_pred ---hC--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 300 ---SG--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 300 ---~~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
.+ .+..+++++.|.++ . ++|++++|+|..|++ +.+++.+.++.++..+
T Consensus 363 ~~~~~~~~g~~t~~~~~I~gg-~------~~~~l~iDiR~~p~~--~~eev~~~I~~~i~~~ 415 (520)
T PRK06156 363 VAYKDDFMGPLTLSPTVVGQD-D------KGTEVTVNLRRPVGK--TPELLKGEIADALAAW 415 (520)
T ss_pred ccccCCCccCcEEeeeEEEEe-C------CeEEEEEEeeCCCCC--CHHHHHHHHHHHHHHH
Confidence 00 02345677777753 2 689999999999999 8899998888877654
No 60
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.86 E-value=2.2e-19 Score=182.66 Aligned_cols=255 Identities=13% Similarity=0.061 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHcCCCCCC---CccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCce
Q 048461 67 ETLQKQIDELSTFSDTPA---PSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~---~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
+.++++|++|++|+|.+. ++ ..-.++.++.++.+|+.++|+++|++++ .++|+.+ +..... +.|+
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~-~~~~~~~~~~~~~~~l~~~~~~~g~~~~--~~~~~~~--------~~~~~~-~~~~ 69 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAK-EGAPFGEGPKKALDKFLELAKRDGFTTE--NVDNYAG--------YAEYGQ-GEEY 69 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHcCceEE--EecCceE--------EEEeCC-CCCe
Confidence 468999999999999752 11 1112345678999999999999999887 3568766 332111 2478
Q ss_pred EEEEecccCCCCCC--------------------ccccHHHHHHHHHHHHHhhhccc--ccccchhhhhcccccCCc-ch
Q 048461 144 VATGSHIDAIPYSG--------------------KYDGVTGVLGALEAINVLKSRLL--AGIESLAKDLTSIVDGKN-IS 200 (362)
Q Consensus 144 Ill~sHlDTVp~gG--------------------~~Dg~~Gv~aal~a~~~L~s~~~--~g~~~~~e~l~~~~D~~G-~~ 200 (362)
|+|.||+||||+++ ..|+|+|+++++.|++.|+.... .+++. +..+.|||. ..
T Consensus 70 l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~----~~~~~dEE~g~~ 145 (447)
T TIGR01887 70 LGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIR----FIFGTDEETGWA 145 (447)
T ss_pred EEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEE----EEEECCcccCcH
Confidence 99999999999743 23788899999999999875433 44454 344678764 22
Q ss_pred H-HHHHHHcCCCCccccchhh----hhccCCceeEEEeecccCcc-----------cccCCce---eeEEEeee------
Q 048461 201 F-LDAARSAGYAKEHNDLSSV----FLKKGSYFAFVELHIEQGPI-----------LEKEGTS---IGIVTAIA------ 255 (362)
Q Consensus 201 ~-~e~~ee~G~~~~~~~i~~~----~~~~~~i~a~~elhie~g~v-----------le~~~~~---~giv~~~k------ 255 (362)
. ...++. ...++..+.... ...+.. ...+++.+ .|+. -++++.. ..++.+++
T Consensus 146 g~~~~l~~-~~~~~~~~~~d~~~~~~~~e~g-~~~~~~~v-~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~ 222 (447)
T TIGR01887 146 CIDYYFEH-EEAPDIGFTPDAEFPIIYGEKG-IVTLEISF-KDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVE 222 (447)
T ss_pred hHHHHHHh-cCCCCEEEeCCCCcceEEEecC-eEEEEEEe-ccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHH
Confidence 2 222322 111100000000 000001 11222222 1110 1111111 11344444
Q ss_pred -------------cce-----EEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHH--Hhhhh----------------
Q 048461 256 -------------APA-----SIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVE--KHVLE---------------- 299 (362)
Q Consensus 256 -------------G~~-----~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~--~l~~~---------------- 299 (362)
|.. |++|+++|+++|++ .|+. |.|||..|++++.+++ +...+
T Consensus 223 ~~~~~~~~~~~~~g~~~~~~~~~~i~v~G~~aHss-~p~~-G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~ 300 (447)
T TIGR01887 223 KEKFVFFIAKELEGSFEVNDGTATITLEGKSAHGS-APEK-GINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGE 300 (447)
T ss_pred HHHHHHhhhcCcceEEEecCCEEEEEEEeeecccC-CCcc-CccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccc
Confidence 666 89999999999976 7885 6999999999999986 22100
Q ss_pred -----h-C--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHH
Q 048461 300 -----S-G--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVK 350 (362)
Q Consensus 300 -----~-~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~ 350 (362)
. + ...+++|+|.|+++ +|++|++++|+|..|+| +.|++...+.
T Consensus 301 ~~~~~~~~~~~~~~t~nvg~I~~g------~p~~~~~~~d~R~~p~~--~~e~~~~~i~ 351 (447)
T TIGR01887 301 KLGIDFHDDVSGDLTMNVGVIDYE------NAEAGLIGLNVRYPVGN--DPDTMLKNEL 351 (447)
T ss_pred cCCCcccCCCcCCcEEEEEEEEEe------CCcEEEEEEEEecCCCC--CHHHHHHHHH
Confidence 0 0 02468999999963 49999999999999999 6676555444
No 61
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.84 E-value=3.8e-19 Score=174.05 Aligned_cols=244 Identities=20% Similarity=0.205 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc----cCcEEEeccCCCceeeeCCCCCC
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA----VGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~----~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
....+..+++..+|++..+..- ....+++|++.+.+.+|+.++.-+ ..+++. +|.|++|+.
T Consensus 24 ~~~~v~~f~eylRi~Tv~p~~d-------y~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~--------T~~GS~P~L 88 (420)
T KOG2275|consen 24 ENISVTRFREYLRIPTVQPNPD-------YTIACADFLKKYAKSLGLTVQKIESEPGKYVLLY--------TWLGSDPEL 88 (420)
T ss_pred cchHHHHHHHHhhccccccCCC-------ccHHHHHHHHHHHHhcCCceeEEEecCceeEEEE--------EeeCCCCCc
Confidence 3567888999999998643221 122788999999999999765321 235677 899999889
Q ss_pred ceEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCC--
Q 048461 142 ASVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGK-- 197 (362)
Q Consensus 142 p~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~-- 197 (362)
|+|||+||+|+||+- |..|+|.-+++.++|++.|+...+.-..++ .+....|||
T Consensus 89 ~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti--~lsfvpDEEi~ 166 (420)
T KOG2275|consen 89 PSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTI--HLSFVPDEEIG 166 (420)
T ss_pred cceeeeccccccCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceE--EEEecCchhcc
Confidence 999999999999962 345889888899999999986554332221 122346754
Q ss_pred cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCC
Q 048461 198 NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMP 277 (362)
Q Consensus 198 G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~ 277 (362)
|......+ .....+++..+...+ -|.|+. +..---+.++.||..|++|+++|+++|++ .|++
T Consensus 167 G~~Gm~~f-----------a~~~~~~~l~~~fil---DEG~~s---e~d~~~vfyaEkg~w~~~v~~~G~~GHss-~~~~ 228 (420)
T KOG2275|consen 167 GHIGMKEF-----------AKTEEFKKLNLGFIL---DEGGAT---ENDFATVFYAEKGPWWLKVTANGTPGHSS-YPPP 228 (420)
T ss_pred CcchHHHH-----------hhhhhhcccceeEEe---cCCCCC---cccceeEEEEeeceeEEEEEecCCCCCCC-CCCC
Confidence 21111110 000001111111111 111110 11112357899999999999999999987 6665
Q ss_pred CCCcHHHHHHHHHHHHHHhhhh------hCC-----CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHH
Q 048461 278 NRNDAGLAAAELALAVEKHVLE------SGS-----IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDME 346 (362)
Q Consensus 278 ~g~nAi~aaa~li~~L~~l~~~------~~~-----~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~ 346 (362)
..|+.++.+++..+++.... ..+ ..+|+||++|++ |.+.|++|.+.++.+|+|..|.+ +.+++.
T Consensus 229 --nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~~vtT~Nv~~i~G-Gv~~N~~P~~~ea~~dirv~~~~--d~~~i~ 303 (420)
T KOG2275|consen 229 --NTAIEKLEKLVESLEEFREKQVDLLASGPKLALGDVTTINVGIING-GVQSNVLPETFEAAFDIRVRPHV--DVKAIR 303 (420)
T ss_pred --ccHHHHHHHHHHHHHHhHHHHHHHhhcCCceeccceeEEeeeeeec-ccccCcCchhheeeeeeEeccCC--CHHHHH
Confidence 68999999999999887521 111 468999999996 58999999999999999999997 666666
Q ss_pred HHH
Q 048461 347 NGV 349 (362)
Q Consensus 347 ~gi 349 (362)
+-+
T Consensus 304 ~~l 306 (420)
T KOG2275|consen 304 DQL 306 (420)
T ss_pred HHH
Confidence 554
No 62
>PRK08554 peptidase; Reviewed
Probab=99.77 E-value=4e-17 Score=165.70 Aligned_cols=239 Identities=15% Similarity=0.099 Sum_probs=148.0
Q ss_pred HHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc---cCcEEEeccCCCceeeeCCCCCCceE
Q 048461 68 TLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA---VGNIYGEISSSSRGVWIGNEAELASV 144 (362)
Q Consensus 68 ~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~---~gNvia~~~~~~~~~~~G~~~~~p~I 144 (362)
+++++|++|++|+|.++++- ....+.++++|++++|+++|++++..+ ..|+++ .+ |. +.+.|
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~----~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~--------~~-~~--~~~~l 66 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSK----GIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYG--------EI-GE--GKPKL 66 (438)
T ss_pred hHHHHHHHHhCCCCCCCccc----CcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEE--------Ee-CC--CCCEE
Confidence 57899999999999764321 123467899999999999999876432 347888 76 32 23789
Q ss_pred EEEecccCCCCCC---------------------ccccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcc----
Q 048461 145 ATGSHIDAIPYSG---------------------KYDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNI---- 199 (362)
Q Consensus 145 ll~sHlDTVp~gG---------------------~~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~---- 199 (362)
+|.||+||||+++ ..|+|+|+++++.|++.|+...+.+++. +..+.|||..
T Consensus 67 ~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~~~~~i~----l~~~~dEE~g~~~~ 142 (438)
T PRK08554 67 LFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEPLNGKVI----FAFTGDEEIGGAMA 142 (438)
T ss_pred EEEeccccCCCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcCCCCCEE----EEEEcccccCcccc
Confidence 9999999999863 2378999999999999987544555555 3445776521
Q ss_pred -hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEE-eee----------------cc---e
Q 048461 200 -SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVT-AIA----------------AP---A 258 (362)
Q Consensus 200 -~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~-~~k----------------G~---~ 258 (362)
.+.+.+.+.+..++..+ +.|++.. .+++ +++ |. .
T Consensus 143 ~~~~~~~~~~~~~~~~~i-----------------------v~Ept~~--~~~~~~~kg~~~~~~~~~~~~~~~g~~~~~ 197 (438)
T PRK08554 143 MHIAEKLREEGKLPKYMI-----------------------NADGIGM--KPIIRRRKGFGVTIRVPSEKVKVKGKLREQ 197 (438)
T ss_pred HHHHHHHHhcCCCCCEEE-----------------------EeCCCCC--cchhhcCCceEEEEEecccccccccceeee
Confidence 11111111111111111 2222221 1222 222 22 3
Q ss_pred EEEEEEEeeC-CCCCcCCCCC-CCcHHHHHHHHHHHHHHhhhhh---------CCCCeEEEEEEEEecCC----------
Q 048461 259 SIKADFEGTG-GHAGAVLMPN-RNDAGLAAAELALAVEKHVLES---------GSIDTVGTVGILELHPG---------- 317 (362)
Q Consensus 259 ~~~I~v~G~~-aHAg~~P~~~-g~nAi~aaa~li~~L~~l~~~~---------~~~~~t~tvG~I~~gg~---------- 317 (362)
++.++++|.+ +|++ .|..+ ..+|+..+++++.++..+.... .+...++++...+.+-+
T Consensus 198 ~~~~~~~~~~~~Ha~-~~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~ 276 (438)
T PRK08554 198 TFEIRTPVVETRHAA-YFLPGVDTHPLIAASHFLRESNVLAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRL 276 (438)
T ss_pred eeceeecccCccccc-cccCCcCchHHHHHHHHHhhcCceEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHH
Confidence 5555566664 9987 45442 2456888888887765432100 01234455544443221
Q ss_pred ------------------------cccee---cCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 318 ------------------------AINSI---PIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 318 ------------------------a~NvV---P~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
.+|++ |++|++++|+|..| + +.+++.+.++.++.
T Consensus 277 ~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR~~~-~--~~e~v~~~i~~~~~ 337 (438)
T PRK08554 277 LKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIRAMS-Y--SKEDIERTLKEVLE 337 (438)
T ss_pred HHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEEEecC-C--CHHHHHHHHHHHhh
Confidence 56777 99999999999988 4 67888888888765
No 63
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.59 E-value=1.2e-14 Score=118.99 Aligned_cols=101 Identities=21% Similarity=0.168 Sum_probs=87.2
Q ss_pred EeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhh-------CCCCeEEEEEEEEecCCccceecC
Q 048461 252 TAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLES-------GSIDTVGTVGILELHPGAINSIPI 324 (362)
Q Consensus 252 ~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~-------~~~~~t~tvG~I~~gg~a~NvVP~ 324 (362)
++++|..+++|+++|+++|++ .|.. +.||+..|++++.+|+++..+. ....++++++.|++ |.+.|+||+
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~s-~~~~-g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~g-G~~~n~ip~ 77 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHSS-RPEK-GVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEG-GTAPNVIPD 77 (111)
T ss_dssp EEEEEEEEEEEEEESBSEETT-SGGG-SBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEE-ESSTTEESS
T ss_pred CcCCCEEEEEEEEEeeccCCC-CccC-ccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeeccc-CCcCCEECC
Confidence 468999999999999999998 8876 6999999999999999985331 12578999999997 479999999
Q ss_pred eEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 325 KSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 325 ~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+|++++++|..|.+ +.+++.+.++.+++.+.
T Consensus 78 ~a~~~~~~R~~p~~--~~~~i~~~i~~~~~~~~ 108 (111)
T PF07687_consen 78 EATLTVDIRYPPGE--DLEEIKAEIEAAVEKIA 108 (111)
T ss_dssp EEEEEEEEEESTCH--HHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCcc--hHHHHHHHHHHHHHHhh
Confidence 99999999999998 77888888887776654
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.13 E-value=2.9e-10 Score=114.12 Aligned_cols=224 Identities=21% Similarity=0.158 Sum_probs=136.2
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCc-----eeeeCCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSR-----GVWIGNE 138 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~-----~~~~G~~ 138 (362)
+..+++++.+.++++|++. |.+|.++..|+.+|++.+|+.++ |+.+|+...-..... +++++..
T Consensus 2 ~~~~~l~~~F~~~~kI~~~----------S~~e~~~~p~~~~~~k~~~~~v~-dE~~~i~~~~~a~~~~~~~~~~L~a~~ 70 (414)
T COG2195 2 LKMERLLDRFLELVKIPTQ----------SKHEKAVAPSTVGQAKLLGLLVE-DELGNIGLKKPATAGENYVPAVLQAHL 70 (414)
T ss_pred cchHHHHHHHHHHeeCCCC----------CCCccccccccHHHHHHcCchhh-hhhccccccccccCCCCeeeEEeeccc
Confidence 4678999999999999986 56788899999999999999886 655443220000000 1555543
Q ss_pred CCCceEEEEecccCCCCC------C-c---c------------------------------------------ccHHHHH
Q 048461 139 AELASVATGSHIDAIPYS------G-K---Y------------------------------------------DGVTGVL 166 (362)
Q Consensus 139 ~~~p~Ill~sHlDTVp~g------G-~---~------------------------------------------Dg~~Gv~ 166 (362)
+.-|.+-+.+|+||+|-. | + | |.+.|++
T Consensus 71 d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia 150 (414)
T COG2195 71 DMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIA 150 (414)
T ss_pred cccccccccccccccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHH
Confidence 334778888888888521 1 0 1 3344555
Q ss_pred HHHHHHHHhhhc--c-cccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCccccc
Q 048461 167 GALEAINVLKSR--L-LAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEK 243 (362)
Q Consensus 167 aal~a~~~L~s~--~-~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~ 243 (362)
..+.++..++.. . ..+.+. ...+.| |+.|.+++....-+. + ..+..+ .++
T Consensus 151 ~i~~al~~~~~~~~~i~h~~i~----~g~s~~----------Ee~g~rg~~~~~~a~-f---~a~~ay--------~iD- 203 (414)
T COG2195 151 EIMTALSVLREKHPEIPHGGIR----GGFSPD----------EEIGGRGAANKDVAR-F---LADFAY--------TLD- 203 (414)
T ss_pred HHHHHHHHHhhcCccccccCeE----EEecch----------HHhhhhhhhhccHHh-h---hcceeE--------ecC-
Confidence 555555554421 1 111111 111112 223322221111000 0 011111 222
Q ss_pred CCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceec
Q 048461 244 EGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIP 323 (362)
Q Consensus 244 ~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP 323 (362)
.+..+.++....+...+++++.|+..|+++.+.. ..||++.+.+++..+..-.. +..++.+.|..+. ++..|.|.
T Consensus 204 Gg~~g~i~~ea~~~~~~~~~~~g~~~h~~~a~~~-~i~a~~~a~e~~~~~~~~~~---~e~t~~~~Gv~~~-~~~~~~V~ 278 (414)
T COG2195 204 GGPVGEIPREAFNAAAVRATIVGPNVHPGSAKGK-MINALLLAAEFILELPLEEV---PELTEGPEGVYHL-GDSTNSVE 278 (414)
T ss_pred CCccCeeeeeccchheeeeeeeccCcCccchHHH-HhhHHHhhhhhhhcCCcccc---cccccccceEEec-cccccchh
Confidence 2233446677789999999999999999987765 48999999988887654222 2357889999997 58999999
Q ss_pred CeEEEEE
Q 048461 324 IKSQLEI 330 (362)
Q Consensus 324 ~~a~l~i 330 (362)
+++.+..
T Consensus 279 ~~s~~~~ 285 (414)
T COG2195 279 ETSLNLA 285 (414)
T ss_pred hhhhhhh
Confidence 7777766
No 65
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.00 E-value=2.5e-08 Score=98.06 Aligned_cols=262 Identities=16% Similarity=0.119 Sum_probs=152.0
Q ss_pred ccccccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc------CcEEEeccCCCce
Q 048461 59 VSSLSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV------GNIYGEISSSSRG 132 (362)
Q Consensus 59 ~~~~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~------gNvia~~~~~~~~ 132 (362)
++.+..+.+++++.|+++++|+|.+.. +....+-+++++|++++++++|-+++.-+. .+.+. |+-..
T Consensus 8 fq~id~~~de~~~~L~e~v~iqsvs~d----p~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v---~lPpv 80 (473)
T KOG2276|consen 8 FQSIDLNKDEFINTLREAVAIQSVSAD----PTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIV---PLPPV 80 (473)
T ss_pred HHHhhccHHHHHHHHHHHhcccccccC----ccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCccc---ccChh
Confidence 455667899999999999999997532 223467789999999999999977664332 22222 00000
Q ss_pred ---eeeCCCCCCceEEEEecccCCCCC---Cc-------------------cccHHHHHHHHHHHHHhhhcc--cccccc
Q 048461 133 ---VWIGNEAELASVATGSHIDAIPYS---GK-------------------YDGVTGVLGALEAINVLKSRL--LAGIES 185 (362)
Q Consensus 133 ---~~~G~~~~~p~Ill~sHlDTVp~g---G~-------------------~Dg~~Gv~aal~a~~~L~s~~--~~g~~~ 185 (362)
++ |++|+.+++++-+|+|++|.+ || -|.++-|++.+.++++++... +.-++.
T Consensus 81 vl~~~-Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~ 159 (473)
T KOG2276|consen 81 VLGVL-GSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVV 159 (473)
T ss_pred hhhcc-cCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEE
Confidence 33 667767899999999999975 21 244445677777777776432 222222
Q ss_pred hhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhcc--CCceeEEEeecccCcccccCCceeeEEEeeecceEEEEE
Q 048461 186 LAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKK--GSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKAD 263 (362)
Q Consensus 186 ~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~--~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~ 263 (362)
+. .|.+||.|+.+-..++.... ++ .+++... |-+-.-+.. ....+-+|-+|...|.|+
T Consensus 160 -----f~---------~EgmEEsgS~~L~~l~~~~k-D~~~~~vD~vc---iSdnyWlg~--kkPcltyGlRG~~yf~i~ 219 (473)
T KOG2276|consen 160 -----FV---------FEGMEESGSEGLDELIEKEK-DKFFKDVDFVC---ISDNYWLGT--KKPCLTYGLRGVIYFQIE 219 (473)
T ss_pred -----EE---------EEechhccCccHHHHHHHHh-hhhhccCCEEE---eeCceeccC--CCcccccccccceeEEEE
Confidence 11 12234444432111221110 00 1122111 111111221 223355678999999999
Q ss_pred EEe--eCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhh---h--------------------h---C-----------C--
Q 048461 264 FEG--TGGHAGAVLMPNRNDAGLAAAELALAVEKHVL---E--------------------S---G-----------S-- 302 (362)
Q Consensus 264 v~G--~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~---~--------------------~---~-----------~-- 302 (362)
|+| +--|||. . + --+-.+|..++..+..+.. + + . .
T Consensus 220 v~g~~~DlHSGv--f-G-G~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~ 295 (473)
T KOG2276|consen 220 VEGPSKDLHSGV--F-G-GVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQM 295 (473)
T ss_pred Eeeccccccccc--c-c-chhHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccc
Confidence 999 8899983 2 2 2333444444433333321 1 0 0 0
Q ss_pred ---C-----------CeEEEEEEEE---ecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 303 ---I-----------DTVGTVGILE---LHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 303 ---~-----------~~t~tvG~I~---~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
. .+++++-.|+ .++++..|||.++...+-+|..|+- +.|.+++-+...++
T Consensus 296 l~~~~k~~~l~~rWryPSLsihgIeGaFs~pG~kTVIP~kVigkfSiRlVP~m--d~e~verlv~~yl~ 362 (473)
T KOG2276|consen 296 LPTDDKKRILMHRWRYPSLSIHGIEGAFSGPGAKTVIPAKVVGKFSIRLVPNM--DPEQVERLVTRYLE 362 (473)
T ss_pred cccCchHHHhhhhcccCccceecccceeeCCCceEEeehhheeeeEEEecCCC--CHHHHHHHHHHHHH
Confidence 0 0123333333 1367999999999999999999997 88888777666443
No 66
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=98.98 E-value=4.6e-08 Score=96.37 Aligned_cols=69 Identities=23% Similarity=0.264 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
++++++|++|..++++ |+.|.++++|++++|++++.++++|..||+++ +++|.+ +.|.||+
T Consensus 2 ~~~~~~LkeL~~~~gp----------sG~E~eVr~~~~~el~~~~~ev~~D~lGnlia--------~~~g~~-g~~~imi 62 (355)
T COG1363 2 EELLELLKELLEAPGP----------SGYEEEVRDVLKEELEPLGDEVEVDRLGNLIA--------KKGGKN-GPPKVMI 62 (355)
T ss_pred hHHHHHHHHHHcCCCC----------CCcHHHHHHHHHHHHHHhCCceEEcCCCcEEE--------EecCCC-CCccEEE
Confidence 5689999999999986 56788899999999999999999999999999 988732 2255999
Q ss_pred EecccCCC
Q 048461 147 GSHIDAIP 154 (362)
Q Consensus 147 ~sHlDTVp 154 (362)
.+|||+|-
T Consensus 63 ~AHmDEiG 70 (355)
T COG1363 63 AAHMDEIG 70 (355)
T ss_pred Eeecceee
Confidence 99999997
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.97 E-value=8.7e-09 Score=102.10 Aligned_cols=194 Identities=14% Similarity=0.128 Sum_probs=130.9
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCC-e-----E-----EEcc--cCcEEEeccCCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGL-S-----V-----REDA--VGNIYGEISSSS 130 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl-~-----v-----~~d~--~gNvia~~~~~~ 130 (362)
+..+|+.++..+||+.+|.+. |..|..-+++|...|.++.. . + .-|+ ..||+|
T Consensus 5 is~e~v~~lt~~LV~~~Svtg--------T~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~A------ 70 (553)
T COG4187 5 ISSERVRALTLSLVSWPSVTG--------TPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFA------ 70 (553)
T ss_pred hhHHHHHHHHHHHeeccccCC--------CcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEE------
Confidence 447999999999999999753 45688889999999988753 1 1 1132 369999
Q ss_pred ceeeeCCCCCCceEEEEecccCCCCC-------------------------------------------CccccHHHHHH
Q 048461 131 RGVWIGNEAELASVATGSHIDAIPYS-------------------------------------------GKYDGVTGVLG 167 (362)
Q Consensus 131 ~~~~~G~~~~~p~Ill~sHlDTVp~g-------------------------------------------G~~Dg~~Gv~a 167 (362)
.++|.. ...+|++.||+|||-.. |..||+.|++.
T Consensus 71 --lVrg~~-~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav 147 (553)
T COG4187 71 --LVRGGT-SKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAV 147 (553)
T ss_pred --EEecCC-CCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHH
Confidence 888743 34789999999999852 23489999999
Q ss_pred HHHHHHHhhh-cccccccchhhhhcccccCC----cc-hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCccc
Q 048461 168 ALEAINVLKS-RLLAGIESLAKDLTSIVDGK----NI-SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPIL 241 (362)
Q Consensus 168 al~a~~~L~s-~~~~g~~~~~e~l~~~~D~~----G~-~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vl 241 (362)
.+.+++.+.. ....|.+- +..++||+ |. ....++++.- ++.++.-- +-|.-.++.
T Consensus 148 ~la~L~~fa~~~~~~GNlL----f~a~pdEE~~s~G~r~a~~~L~~L~-------------kk~~l~~~--~~IN~D~~~ 208 (553)
T COG4187 148 HLACLEEFAARTDRQGNLL----FMAVPDEEVESRGMREARPALPGLK-------------KKFDLEYT--AAINLDVTS 208 (553)
T ss_pred HHHHHHHHhhCCCCCCcEE----EEeccchhhhcccHHHHHHHHHHHH-------------HhhCceEE--EEecccccc
Confidence 9988887764 35677765 34567764 21 1112222110 01111111 111111121
Q ss_pred cc--CCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHH
Q 048461 242 EK--EGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEK 295 (362)
Q Consensus 242 e~--~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~ 295 (362)
+. ....--+.+|..|..---..|.|+..|+| .|.. |+||-..++++..+|+-
T Consensus 209 ~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG-~~f~-Gvnan~maSei~~~le~ 262 (553)
T COG4187 209 DQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVG-YPFE-GVNANFMASEITRRLEL 262 (553)
T ss_pred CCCCCccceEEEeccchhhcceeEEEeeccccC-Cccc-CCCHHHHHHHHHHHhhc
Confidence 11 12223467889999999999999999998 7876 69999999999999874
No 68
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=98.96 E-value=3.6e-09 Score=103.87 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=65.2
Q ss_pred cccCCHhHHHHHHHHHHHHHHCCCeEEEcc--------------------cCcEEEeccCCCceeeeCCCCCCceEEEEe
Q 048461 89 RVLHTENDVLARSYIKNLMGISGLSVREDA--------------------VGNIYGEISSSSRGVWIGNEAELASVATGS 148 (362)
Q Consensus 89 r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~--------------------~gNvia~~~~~~~~~~~G~~~~~p~Ill~s 148 (362)
|+.-|..|.++++||+++|+++|++++.+. ..||++ +++|+. .+.|++.+
T Consensus 47 R~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa--------~~~G~~--~~~Ill~A 116 (346)
T PRK10199 47 RMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIA--------AHEGKA--PQQIIIMA 116 (346)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEE--------EECCCC--CCeEEEEE
Confidence 555689999999999999999999876321 136999 888853 37899999
Q ss_pred cccCCCCC---------------CccccHHHHHHHHHHHHHhhhc
Q 048461 149 HIDAIPYS---------------GKYDGVTGVLGALEAINVLKSR 178 (362)
Q Consensus 149 HlDTVp~g---------------G~~Dg~~Gv~aal~a~~~L~s~ 178 (362)
|+|||++. |..|++.|++++|++++.|+..
T Consensus 117 H~DTV~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~ 161 (346)
T PRK10199 117 HLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNV 161 (346)
T ss_pred EcCcCCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhC
Confidence 99999752 5678999999999999999743
No 69
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=98.78 E-value=2.2e-08 Score=98.89 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceE
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASV 144 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~I 144 (362)
|.+++.++|++|++++++ |+.|.++++|++++|+++|+++++|..||+++ +++|+. ++|+|
T Consensus 1 ~~~~~~~lLk~Lv~~~s~----------SG~E~~V~~~l~~~l~~~g~ev~~D~~Gnlia--------~~~g~~-~~~~v 61 (343)
T TIGR03106 1 DTDYLTETLLALLAIPSP----------TGFTDAVVRYVAERLEDLGIEYELTRRGAIRA--------TLPGRE-ATPAR 61 (343)
T ss_pred ChHHHHHHHHHHhcCCCC----------CCCHHHHHHHHHHHHHHcCCeEEECCCeEEEE--------EECCCC-CCCeE
Confidence 457899999999999986 45788999999999999999999999999999 887742 34799
Q ss_pred EEEecccCCCC
Q 048461 145 ATGSHIDAIPY 155 (362)
Q Consensus 145 ll~sHlDTVp~ 155 (362)
||.+|||+|..
T Consensus 62 ~l~aHmDevG~ 72 (343)
T TIGR03106 62 AVVTHLDTLGA 72 (343)
T ss_pred EEEEeeccccc
Confidence 99999999984
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=98.61 E-value=1e-07 Score=94.26 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=57.8
Q ss_pred HHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEecc
Q 048461 71 KQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSHI 150 (362)
Q Consensus 71 ~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHl 150 (362)
++|++|++++++ |+.|.+++++++++|+++|.++++|..||+++ ++.|+ ++|+|||.+||
T Consensus 4 ~~L~~L~~~~s~----------sG~E~~v~~~i~~~l~~~~~~v~~D~~Gnvi~--------~~~g~--~~~~v~l~aHm 63 (344)
T PRK09961 4 SLLKALSEADAI----------ASSEQEVRQILLEEADRLQKEVRFDGLGSVLI--------RLNES--TGPKVMICAHM 63 (344)
T ss_pred HHHHHHHhCCCC----------CCChHHHHHHHHHHHHhhCCEEEECCCCCEEE--------EEcCC--CCCEEEEEecc
Confidence 679999999986 46789999999999999999999999999999 88663 34799999999
Q ss_pred cCCCC
Q 048461 151 DAIPY 155 (362)
Q Consensus 151 DTVp~ 155 (362)
|+|+.
T Consensus 64 Devg~ 68 (344)
T PRK09961 64 DEVGF 68 (344)
T ss_pred ceece
Confidence 99984
No 71
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=98.55 E-value=1.8e-07 Score=92.57 Aligned_cols=67 Identities=19% Similarity=0.359 Sum_probs=58.2
Q ss_pred HHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEecc
Q 048461 71 KQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSHI 150 (362)
Q Consensus 71 ~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHl 150 (362)
++|++|++++++ |+.|.+++++++++|++++.++++|..||+++ +++|...++|.||+.+||
T Consensus 2 ~~L~~L~~~~gp----------SG~E~~v~~~i~~~l~~~~~~v~~D~~GNvia--------~~~g~~~~~~~vml~AHm 63 (350)
T TIGR03107 2 NKIKEVTELQGT----------SGFEHPIRDYLRQDITPLVDQVETDGLGGIFG--------IKESQVENAPRVMVAAHM 63 (350)
T ss_pred hHHHHHHhCCCC----------CCCcHHHHHHHHHHHHhhCCEEEECCCCCEEE--------EecCCCCCCCEEEEEecc
Confidence 569999999886 57899999999999999999999999999999 876631235799999999
Q ss_pred cCCCC
Q 048461 151 DAIPY 155 (362)
Q Consensus 151 DTVp~ 155 (362)
|+|+-
T Consensus 64 DeVGf 68 (350)
T TIGR03107 64 DEVGF 68 (350)
T ss_pred cEeCE
Confidence 99983
No 72
>PRK09864 putative peptidase; Provisional
Probab=98.36 E-value=1.2e-06 Score=86.77 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEec
Q 048461 70 QKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSH 149 (362)
Q Consensus 70 ~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sH 149 (362)
+++|++|++++++ |+.|.+++++++++|+.++.++++|..||+++ +. |. ++|.||+.+|
T Consensus 3 ~~~L~~L~~~~g~----------SG~E~~v~~~l~~~l~~~~dev~~D~~GNli~--------~~-g~--~~~kvml~AH 61 (356)
T PRK09864 3 IELLQQLCEASAV----------SGDEQEVRDILINTLEPCVNEITFDGLGSFVA--------RK-GN--KGPKVAVVGH 61 (356)
T ss_pred HHHHHHHHcCCCC----------CCchHHHHHHHHHHHHHhCCEEEECCCCCEEE--------Ee-CC--CCcEEEEEec
Confidence 4569999999886 57899999999999999999999999999999 75 52 3479999999
Q ss_pred ccCCCC
Q 048461 150 IDAIPY 155 (362)
Q Consensus 150 lDTVp~ 155 (362)
||+|+.
T Consensus 62 mDevG~ 67 (356)
T PRK09864 62 MDEVGF 67 (356)
T ss_pred ccccCE
Confidence 999983
No 73
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=98.18 E-value=2.8e-05 Score=68.83 Aligned_cols=34 Identities=29% Similarity=0.491 Sum_probs=27.4
Q ss_pred CeEEEEE----eeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 324 IKSQLEI----GYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 324 ~~a~l~i----~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
.-..+.+ +..|.|+|++..+++.++++.+.+.|+
T Consensus 151 ~~~~i~~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 151 GIPAIGFGPGGSNAHTPDEYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp TEEEEEEESCEESTTSTT-EEEHHHHHHHHHHHHHHHH
T ss_pred ccceeeeCCCCCCCCCCCcEecHHHHHHHHHHHHHHHh
Confidence 4444555 478999999999999999999999886
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.23 E-value=0.0026 Score=68.67 Aligned_cols=101 Identities=24% Similarity=0.294 Sum_probs=71.9
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCC-------eEEEc------------------
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGL-------SVRED------------------ 117 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl-------~v~~d------------------ 117 (362)
....+|.++.+.+|.+++..+.++ ..+|..+.+|+.+++++..= ..++|
T Consensus 53 ~f~~~rA~~~l~~ls~~G~~~~gS------~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~ 126 (834)
T KOG2194|consen 53 QFSEARALKDLLSLSAAGPHPVGS------DNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQ 126 (834)
T ss_pred hhHHHHHHHHHHHHHhcCCcccCc------hhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheee
Confidence 356899999999999997543322 24566899999999977531 12222
Q ss_pred ccCcEEEeccCCCceeeeCCCCCC-ceEEEEecccCCCCC-CccccHHHHHHHHHHHHHhhh
Q 048461 118 AVGNIYGEISSSSRGVWIGNEAEL-ASVATGSHIDAIPYS-GKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 118 ~~gNvia~~~~~~~~~~~G~~~~~-p~Ill~sHlDTVp~g-G~~Dg~~Gv~aal~a~~~L~s 177 (362)
..-||+. ++.++.... -.|++++|.||||.+ |.-|.-.+|+.+|++++.+.+
T Consensus 127 ~i~NIvV--------ki~~k~~~~~~~lLlnaHfDSvpt~~gAtDDg~~va~mLe~lRv~s~ 180 (834)
T KOG2194|consen 127 NISNIVV--------KISPKNGNDKNALLLNAHFDSVPTGPGATDDGSGVASMLEALRVLSK 180 (834)
T ss_pred eeeeEEE--------ecCCCCCCccceeeeeccccccCCCCCCCcchhHHHHHHHHHHHhhc
Confidence 1257888 665543322 379999999999986 445666689999999999863
No 75
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=90.71 E-value=0.46 Score=45.62 Aligned_cols=94 Identities=18% Similarity=0.161 Sum_probs=63.1
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc-----------cCcEEEeccCCCce
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA-----------VGNIYGEISSSSRG 132 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~-----------~gNvia~~~~~~~~ 132 (362)
.+..++++.|.-+.. +. ..-|+.-+++++||.+.++.+|+.|+.|. ..|+++
T Consensus 48 s~~~~~~~~L~p~lv-~R--------vpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~-------- 110 (338)
T KOG3946|consen 48 SDWNRLWENLLPILV-PR--------VPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIA-------- 110 (338)
T ss_pred CCHHHHHHhhhhhhc-cc--------cCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEE--------
Confidence 466777777554432 22 22366788999999999999999988764 258898
Q ss_pred eeeCCCCCCceEEEEecccCC-CCCCccccH----HHHHHHHHHHHHhh
Q 048461 133 VWIGNEAELASVATGSHIDAI-PYSGKYDGV----TGVLGALEAINVLK 176 (362)
Q Consensus 133 ~~~G~~~~~p~Ill~sHlDTV-p~gG~~Dg~----~Gv~aal~a~~~L~ 176 (362)
++..+. ...+++.+|.|+= ++++.+-|. .-.++.+..++.|.
T Consensus 111 tl~~~A--~r~lVlachydsk~~p~~~~vgatdsAvpcamll~laq~l~ 157 (338)
T KOG3946|consen 111 TLDPNA--SRYLVLACHYDSKIFPGGMFVGATDSAVPCAMLLNLAQALD 157 (338)
T ss_pred ecCCCc--chheeeecccccccCCCcceEeeccccccHHHHHHHHHHHH
Confidence 886542 2579999999996 455554332 22345556666554
No 76
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=90.24 E-value=0.39 Score=42.23 Aligned_cols=35 Identities=34% Similarity=0.589 Sum_probs=27.2
Q ss_pred eEEEEecccCCC------C-CCccccHHHHHHHHHHHHHhhh
Q 048461 143 SVATGSHIDAIP------Y-SGKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 143 ~Ill~sHlDTVp------~-gG~~Dg~~Gv~aal~a~~~L~s 177 (362)
.|++++|+|+++ . .|..|.-.|++.+|+.++.|+.
T Consensus 2 ~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~ 43 (179)
T PF04389_consen 2 YIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKE 43 (179)
T ss_dssp EEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHH
Confidence 589999999986 2 3567888899999999999985
No 77
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=87.22 E-value=0.55 Score=45.52 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=18.6
Q ss_pred CcEEEeccCCCceeeeCCCCCCceEEEEecccCCC
Q 048461 120 GNIYGEISSSSRGVWIGNEAELASVATGSHIDAIP 154 (362)
Q Consensus 120 gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp 154 (362)
||+|+ +++|. .+.|.||+.+|||.|-
T Consensus 1 Gnvi~--------~~~g~-~~~~~vmi~AHmDEiG 26 (292)
T PF05343_consen 1 GNVIA--------RKKGK-EGGPKVMIAAHMDEIG 26 (292)
T ss_dssp S-EEE--------EECSS-CSSSEEEEEEE--B-E
T ss_pred CcEEE--------EECCC-CCCceEEEEEccceee
Confidence 79999 98883 3569999999999986
No 78
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=75.98 E-value=4.9 Score=43.61 Aligned_cols=51 Identities=27% Similarity=0.314 Sum_probs=37.5
Q ss_pred cccCcEEEeccCCCceeeeCCCCCCceEEEEecccCCCCCCccccHHHHHHHHHHHHHhh
Q 048461 117 DAVGNIYGEISSSSRGVWIGNEAELASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLK 176 (362)
Q Consensus 117 d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~ 176 (362)
.+.-||+| +++|......-|++++|-|+.-.| ..|.-.|.+..++..+.+.
T Consensus 336 ~ki~NIig--------~I~Gs~epD~~ViigahrDSw~~G-a~dp~sGta~Ll~i~~~~~ 386 (702)
T KOG2195|consen 336 TKIQNIIG--------KIEGSEEPDRYVIIGAHRDSWTFG-AIDPNSGTALLLEIARALS 386 (702)
T ss_pred eeeeeEEE--------EEecCcCCCeEEEEeccccccccC-CcCCCccHHHHHHHHHHHH
Confidence 44579999 999954335789999999999888 4455556666666666654
No 79
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=75.15 E-value=2.9 Score=42.21 Aligned_cols=31 Identities=45% Similarity=0.623 Sum_probs=28.8
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+.+|+|+|+++.+++..+++++.+++.+|+.
T Consensus 374 g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 374 GISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999998864
No 80
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=74.53 E-value=3.1 Score=41.70 Aligned_cols=31 Identities=45% Similarity=0.703 Sum_probs=29.5
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+||++.+++.++++++.+.|.+|..
T Consensus 378 ~~~H~~~E~v~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 378 GLAHQPNEYVELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred ccccCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999865
No 81
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=74.21 E-value=35 Score=34.01 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=27.1
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
-+-|+|.|.++.+|+++.++-+.+.+++|.
T Consensus 313 Ry~Hs~~e~i~~~D~~~~~~Ll~~~i~~l~ 342 (350)
T TIGR03107 313 RYIHSHQTLYSIDDFLAAQAFLQAIVKKLD 342 (350)
T ss_pred ccccChhheeeHHHHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999888764
No 82
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=71.94 E-value=3.9 Score=43.58 Aligned_cols=31 Identities=29% Similarity=0.383 Sum_probs=28.7
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+.+|+|+||++.+++..+++++.+++.+++.
T Consensus 560 g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 560 GISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999998875
No 83
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=69.81 E-value=4.5 Score=43.03 Aligned_cols=31 Identities=32% Similarity=0.518 Sum_probs=28.3
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+.+|+|+||++.+++..+++++.+++.+++.
T Consensus 558 g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~ 588 (591)
T PRK13590 558 GISHNPLESSTADDMQLAVQAFQHLLDQLAA 588 (591)
T ss_pred CCCCCCccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999988764
No 84
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=68.37 E-value=4.6 Score=39.24 Aligned_cols=30 Identities=30% Similarity=0.430 Sum_probs=27.8
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++.++++++.+.+.++.
T Consensus 305 ~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~ 334 (336)
T TIGR01902 305 TLDHTPQEKISLAEYLIGIKTLMLAIEELW 334 (336)
T ss_pred ccCCCCcceeEHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999998875
No 85
>PRK07205 hypothetical protein; Provisional
Probab=67.60 E-value=5.5 Score=40.48 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=28.7
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+|+++.+++.++++++.++|.+++.
T Consensus 413 ~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 413 QTEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred CCCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999998864
No 86
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=67.23 E-value=4.9 Score=40.36 Aligned_cols=31 Identities=39% Similarity=0.638 Sum_probs=28.3
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+||++.+++.++++++.+++.++..
T Consensus 393 ~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~ 423 (427)
T PRK13013 393 DLAHQPDEWVGIADMVDSAKVMALVLADLLA 423 (427)
T ss_pred cccCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 4589999999999999999999999998854
No 87
>PRK09133 hypothetical protein; Provisional
Probab=64.62 E-value=6.4 Score=40.37 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=28.8
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+||++.+++.++++++.+++.++++
T Consensus 440 ~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 440 TFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred ccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 5689999999999999999999999998865
No 88
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=61.00 E-value=15 Score=37.01 Aligned_cols=39 Identities=36% Similarity=0.471 Sum_probs=33.7
Q ss_pred CceEEEEecccCCCCC-CccccHHHHHHHHHHHHHhhhcc
Q 048461 141 LASVATGSHIDAIPYS-GKYDGVTGVLGALEAINVLKSRL 179 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~g-G~~Dg~~Gv~aal~a~~~L~s~~ 179 (362)
.+.+++.+|+|++|.+ |..|.-.|++..+++++.|+...
T Consensus 208 ~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~~ 247 (435)
T COG2234 208 DSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGNP 247 (435)
T ss_pred CceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcCC
Confidence 3679999999998874 88999999999999999998654
No 89
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=60.97 E-value=8.1 Score=38.69 Aligned_cols=29 Identities=41% Similarity=0.682 Sum_probs=26.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
+..|+|+|+++.+++..+++++.+++.+|
T Consensus 373 ~~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 373 GISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred CCcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 45899999999999999999999998764
No 90
>PRK08652 acetylornithine deacetylase; Provisional
Probab=60.86 E-value=7.4 Score=37.69 Aligned_cols=30 Identities=17% Similarity=0.118 Sum_probs=27.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+||++.+|+.+++++|.+.+.++-
T Consensus 316 ~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~ 345 (347)
T PRK08652 316 DLCHTKFERIDVREVEKAKEFLKALNEILL 345 (347)
T ss_pred hhcCCCCceeeHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999998764
No 91
>PRK13381 peptidase T; Provisional
Probab=59.02 E-value=7.3 Score=39.00 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=27.5
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|.|+||++.+++.++++++.+.+.++++
T Consensus 375 ~aH~~dE~v~i~~l~~~~~v~~~~~~~~~~ 404 (404)
T PRK13381 375 NFHSRFEFLPVSSFVKSYEVTITICLLAAK 404 (404)
T ss_pred CCcCcceeEEHHHHHHHHHHHHHHHHHhcC
Confidence 389999999999999999999999988764
No 92
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=58.69 E-value=9.4 Score=37.29 Aligned_cols=30 Identities=20% Similarity=0.250 Sum_probs=27.7
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+||++.+++.++++++.+++.++.
T Consensus 314 ~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~ 343 (346)
T PRK00466 314 MLEHTNQEKITLDEIYIAVKTYMLAIEELW 343 (346)
T ss_pred ccccCCCceeeHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999998875
No 93
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=57.10 E-value=12 Score=37.61 Aligned_cols=31 Identities=39% Similarity=0.527 Sum_probs=28.5
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSLQ 362 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~~ 362 (362)
..|.|+|+++.+++..+++++.+.+.++.+|
T Consensus 383 ~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~~ 413 (414)
T PRK12890 383 ISHNPEEAMDPEDLAAGARVLLDAVLRLDRQ 413 (414)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 3699999999999999999999999998765
No 94
>PRK07338 hypothetical protein; Provisional
Probab=56.09 E-value=9.2 Score=38.09 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=28.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+||++++++.++++++..++.+++.
T Consensus 369 ~~~H~~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 369 GNIHSEDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred CCCCCccceEehhhHHHHHHHHHHHHHHHhc
Confidence 5589999999999999999999999998753
No 95
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=55.95 E-value=11 Score=37.61 Aligned_cols=30 Identities=13% Similarity=0.263 Sum_probs=27.8
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|.|+|+++.+++.++++++.+.|.++..
T Consensus 370 ~aH~~dE~i~i~~l~~~~~~~~~~l~~~~~ 399 (400)
T TIGR01880 370 LLHDHNEFLNEAVFLRGIEIYQTLISALAS 399 (400)
T ss_pred cccCCCCceEHHHHHHHHHHHHHHHHHhhc
Confidence 579999999999999999999999998854
No 96
>PRK05111 acetylornithine deacetylase; Provisional
Probab=55.25 E-value=12 Score=36.81 Aligned_cols=30 Identities=17% Similarity=0.322 Sum_probs=27.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++.++++++.+.+.++.
T Consensus 352 ~~~H~~~E~v~~~~l~~~~~i~~~~~~~~~ 381 (383)
T PRK05111 352 EQAHQPDEYLELSFIKPTRELLRQLIHHFC 381 (383)
T ss_pred HhCcCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 357999999999999999999999998874
No 97
>PRK07318 dipeptidase PepV; Reviewed
Probab=53.04 E-value=13 Score=38.10 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=27.2
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|.|+|+++.+++..+++++.+++.+++
T Consensus 437 ~aH~~dE~v~i~~l~~~~~v~~~~l~~~~ 465 (466)
T PRK07318 437 TMHQANEYIEIDDLIKAAAIYAEAIYELA 465 (466)
T ss_pred CCcCCCcceeHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999875
No 98
>PRK07079 hypothetical protein; Provisional
Probab=52.86 E-value=16 Score=37.47 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=27.9
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 048461 333 SHKPEEYASCEDMENGVKVLALTLAKLSLQ 362 (362)
Q Consensus 333 rh~p~E~~~~ed~~~gi~~l~~~l~~l~~~ 362 (362)
.|.|+||++.+++..+++++.+++.++..|
T Consensus 428 ~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 428 QHAPNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 599999999999999999999999998764
No 99
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=52.28 E-value=14 Score=37.19 Aligned_cols=31 Identities=26% Similarity=0.272 Sum_probs=27.9
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|+|+|+++.+++..+++++.+++.+++.
T Consensus 380 ~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~ 410 (414)
T PRK12891 380 GLSHNEAEAITPEWFAAGADVLLRAVLQSAQ 410 (414)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999999998753
No 100
>PRK06915 acetylornithine deacetylase; Validated
Probab=51.89 E-value=13 Score=37.38 Aligned_cols=30 Identities=33% Similarity=0.533 Sum_probs=27.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++..+++++.+.+.++.
T Consensus 389 ~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~ 418 (422)
T PRK06915 389 KVAHYPNEYIEVDKMIAAAKIIALTLLDWC 418 (422)
T ss_pred cccCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 458999999999999999999999998763
No 101
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=51.85 E-value=33 Score=35.30 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=35.7
Q ss_pred CeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 304 DTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 304 ~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
.+++|+|+|+.+ |++|.+.+++|..|.+ +++++.+.++..+.
T Consensus 337 ~~t~n~g~i~~~-------~~~~~~~i~~R~~~~~--~~~~i~~~i~~~~~ 378 (477)
T TIGR01893 337 ESSLNLGVVKTK-------ENKVIFTFLIRSSVES--DKDYVTEKIESIAK 378 (477)
T ss_pred EeeeeEEEEEEc-------CCEEEEEEEeCCCCch--hHHHHHHHHHHHhh
Confidence 467899999953 7899999999999998 88998888877665
No 102
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=51.06 E-value=23 Score=35.57 Aligned_cols=39 Identities=33% Similarity=0.388 Sum_probs=32.0
Q ss_pred CceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhccc
Q 048461 141 LASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRLL 180 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~~ 180 (362)
...+++++|.|+=.. |--|..+|+.++++++..|.+..+
T Consensus 189 n~vv~i~AH~DHW~~-G~tDN~lg~~~AV~~~~~lr~~~~ 227 (486)
T COG4882 189 NGVVLIGAHLDHWYT-GFTDNILGVAQAVETAGRLRGRGL 227 (486)
T ss_pred CCceEEeechhhhhh-cccchhhhHHHHHHHHHHHhhcCc
Confidence 368999999999655 455899999999999999885544
No 103
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=48.84 E-value=19 Score=35.89 Aligned_cols=31 Identities=45% Similarity=0.623 Sum_probs=27.7
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|+|+|+++.+++..+++++.+++.++..
T Consensus 381 ~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 381 GISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 3479999999999999999999999988753
No 104
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=47.37 E-value=17 Score=35.62 Aligned_cols=30 Identities=27% Similarity=0.330 Sum_probs=27.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++.++++++.+++.++.
T Consensus 345 ~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 345 ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 347999999999999999999999998764
No 105
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=46.51 E-value=17 Score=35.78 Aligned_cols=29 Identities=34% Similarity=0.308 Sum_probs=26.3
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
+..|.|+|+++.+++.++++++.+.|.+|
T Consensus 342 ~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 342 ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 34799999999999999999999999765
No 106
>PRK06446 hypothetical protein; Provisional
Probab=45.58 E-value=23 Score=35.92 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=28.0
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
...|.++|+++.+++..+++.+.+++.++.+
T Consensus 405 ~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~~ 435 (436)
T PRK06446 405 SNAHAPNENIRIDDYYKAIKHTEEFLKLYST 435 (436)
T ss_pred cCCcCCCCCcCHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999999999999999999988754
No 107
>PRK08201 hypothetical protein; Provisional
Probab=45.30 E-value=24 Score=35.87 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=27.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|.|+|+++.+++.++++++.+++.++..
T Consensus 426 ~~H~~nE~v~i~~l~~~~~~l~~~~~~~~~ 455 (456)
T PRK08201 426 NFHAPNEHFHLENFDKGLRTLVEYWHQLAE 455 (456)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHhhc
Confidence 469999999999999999999999998864
No 108
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=44.94 E-value=21 Score=35.34 Aligned_cols=31 Identities=32% Similarity=0.576 Sum_probs=28.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+|+++.+++..+++++.+.+.+|..
T Consensus 362 ~~~H~~~E~i~~~~l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 362 ELAHAPDEYVEVKDVEKAAKVYEEVLKRLAK 392 (394)
T ss_pred HhcCCCCceeEHHHHHHHHHHHHHHHHHhhc
Confidence 3589999999999999999999999998864
No 109
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=44.59 E-value=21 Score=34.87 Aligned_cols=29 Identities=24% Similarity=0.392 Sum_probs=26.0
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
+..|.|+||++.+++.++++.+.+.+.+|
T Consensus 320 ~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 320 DLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred cccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 34699999999999999999999998765
No 110
>PRK07522 acetylornithine deacetylase; Provisional
Probab=43.96 E-value=24 Score=34.68 Aligned_cols=30 Identities=27% Similarity=0.405 Sum_probs=27.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|++..+++.++++++.+.+.+++
T Consensus 355 ~~~H~~~E~i~i~~l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 355 EQAHKPDEFVELAQLAACEAFLRRLLASLA 384 (385)
T ss_pred hhCCCCCccccHHHHHHHHHHHHHHHHHHh
Confidence 357999999999999999999999998875
No 111
>PRK08262 hypothetical protein; Provisional
Probab=41.51 E-value=25 Score=36.17 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=27.9
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+|+++.+++.++++++.+.+.++..
T Consensus 455 ~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 455 ARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred cCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 4679999999999999999999999987753
No 112
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=40.02 E-value=22 Score=34.57 Aligned_cols=26 Identities=15% Similarity=0.276 Sum_probs=24.1
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
+..|.|+|+++.+++.++++++.++|
T Consensus 326 ~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 326 ALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred hhccCCCCceEHHHHHHHHHHHHHHh
Confidence 56899999999999999999999876
No 113
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=39.68 E-value=24 Score=35.49 Aligned_cols=30 Identities=27% Similarity=0.227 Sum_probs=27.2
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 048461 333 SHKPEEYASCEDMENGVKVLALTLAKLSLQ 362 (362)
Q Consensus 333 rh~p~E~~~~ed~~~gi~~l~~~l~~l~~~ 362 (362)
-|.++||++.+++..+++++.+.+...++|
T Consensus 380 aHt~dE~v~i~~l~~~~~~~~~li~~~~~~ 409 (410)
T TIGR01882 380 MHGRFEYISVDNMVKAVDVIVEIAKLNEEQ 409 (410)
T ss_pred CcCCceEEEHHHHHHHHHHHHHHHHHHhhc
Confidence 699999999999999999999999876654
No 114
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=39.29 E-value=28 Score=35.73 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=27.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
...|.++||++.+++.++++++.+++.++.
T Consensus 436 ~~aH~~dE~V~i~el~~a~~iy~~~i~~l~ 465 (466)
T TIGR01886 436 DVMHQANEFMMLDDLILAAAIYAEAIYELA 465 (466)
T ss_pred CCccCCCcceEHHHHHHHHHHHHHHHHHHh
Confidence 346999999999999999999999999875
No 115
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=39.11 E-value=33 Score=34.37 Aligned_cols=30 Identities=40% Similarity=0.557 Sum_probs=27.2
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|.|+|+++.+++..+++++.+.+.++..
T Consensus 382 ~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~ 411 (413)
T PRK09290 382 ISHNPAEFTSPEDCAAGANVLLHALLELAE 411 (413)
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 369999999999999999999999988754
No 116
>PRK07907 hypothetical protein; Provisional
Probab=38.93 E-value=33 Score=34.88 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=26.9
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|.|+|+++.+++.++++.+.+.|.++.
T Consensus 419 ~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 419 RAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999875
No 117
>PRK05469 peptidase T; Provisional
Probab=38.73 E-value=26 Score=35.08 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=27.3
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|+|+||++.+++..+++++.+++..++.
T Consensus 377 ~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~ 406 (408)
T PRK05469 377 NFHGKFEFVSLESMEKAVEVIVEIAELTAE 406 (408)
T ss_pred cCcCcceeeEHHHHHHHHHHHHHHHHHHhc
Confidence 389999999999999999999999988764
No 118
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=38.14 E-value=21 Score=35.86 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 333 SHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 333 rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.|.|+|+++.+++..+++++.+.+.++..
T Consensus 380 aH~~nE~i~i~~~~~~~~~~~~~~~~~~~ 408 (410)
T PRK06133 380 AHSNDEYIELNSIVPRLYLLTRMIMELSR 408 (410)
T ss_pred CCCCCcEEEcccHHHHHHHHHHHHHHhhc
Confidence 79999999999999999999999988753
No 119
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=37.42 E-value=30 Score=33.98 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=26.4
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|.|+|+++.+++.++++.+.+.+.++.
T Consensus 348 ~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 348 TAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred cCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 45999999999999999999999998764
No 120
>PRK06156 hypothetical protein; Provisional
Probab=37.33 E-value=35 Score=35.64 Aligned_cols=29 Identities=14% Similarity=0.302 Sum_probs=26.9
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 333 SHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 333 rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.|.|+|+++.+++..+++++.++|.++.+
T Consensus 488 aHt~dE~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 488 GHTENEFKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred CcCcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999998753
No 121
>PRK13004 peptidase; Reviewed
Probab=36.91 E-value=31 Score=34.43 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=27.6
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++.++++++.+++.++.
T Consensus 367 ~~aH~~nE~i~i~~l~~~~~~~~~~~~~~~ 396 (399)
T PRK13004 367 PLAHAPNEYTWKEQLVKAAAMYAAIPKSLL 396 (399)
T ss_pred cccCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 457999999999999999999999999876
No 122
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=36.27 E-value=31 Score=34.32 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=27.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+||++.+++.++++++.+.+.++.
T Consensus 365 ~~aH~~nE~v~i~~l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03320 365 DQAHAPNEKTWKEDLVRAAAMYAAIPTVYL 394 (395)
T ss_pred hhccCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 467999999999999999999999998764
No 123
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=35.88 E-value=39 Score=33.76 Aligned_cols=30 Identities=30% Similarity=0.439 Sum_probs=27.1
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++..+++++.+.+.++.
T Consensus 380 ~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~ 409 (412)
T PRK12893 380 GISHNEAEDTEPADLAAGANVLLHAVLELA 409 (412)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHhh
Confidence 346999999999999999999999998875
No 124
>PRK02813 putative aminopeptidase 2; Provisional
Probab=35.58 E-value=1.9e+02 Score=29.59 Aligned_cols=27 Identities=22% Similarity=0.183 Sum_probs=22.5
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
=+-|+|.|.++.+|+...++.+...+.
T Consensus 400 l~MHS~~E~~~~~D~~~~~~l~~~f~~ 426 (428)
T PRK02813 400 LAMHSARELAGVKDHAYLIKALTAFFS 426 (428)
T ss_pred cccccHHHHccHHHHHHHHHHHHHHhc
Confidence 347999999999999999998876543
No 125
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=35.56 E-value=32 Score=33.97 Aligned_cols=28 Identities=36% Similarity=0.578 Sum_probs=24.9
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAK 358 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~ 358 (362)
...|.|+|+++.+++.++++++.+++.+
T Consensus 372 ~~~H~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 372 ETAHQPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred ccCCCCCceeeHHHHHHHHHHHHHHHhc
Confidence 3479999999999999999999998753
No 126
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=35.49 E-value=32 Score=34.27 Aligned_cols=30 Identities=20% Similarity=0.185 Sum_probs=27.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++..+++.+.+.+.++.
T Consensus 365 ~~aH~~dE~i~i~~l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03526 365 DQAHAPNEKTWKEDLVKAAAMYAAIPTVYL 394 (395)
T ss_pred hhccCCCceEEHHHHHHHHHHHHHHHHHhc
Confidence 357999999999999999999999998874
No 127
>PRK09104 hypothetical protein; Validated
Probab=34.03 E-value=44 Score=34.13 Aligned_cols=30 Identities=30% Similarity=0.420 Sum_probs=27.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++.++++.+.+.+.++.
T Consensus 433 ~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 433 DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 357999999999999999999999998875
No 128
>PRK07906 hypothetical protein; Provisional
Probab=32.78 E-value=39 Score=33.92 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=25.5
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAK 358 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~ 358 (362)
+..|.++|+++.+++.++++++.+.+.+
T Consensus 398 ~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 398 ALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred ccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 4679999999999999999999998864
No 129
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=31.16 E-value=1.3e+02 Score=31.13 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=23.2
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHH
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAK 358 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~ 358 (362)
.-|+|.|.+..+|+...++.+...+..
T Consensus 428 ~MHS~rE~~~~~D~~~~~~l~~af~~~ 454 (465)
T PTZ00371 428 AMHSIREMCGVVDIYYLVKLIKAFFTN 454 (465)
T ss_pred ccccHHHHccHHHHHHHHHHHHHHHHh
Confidence 479999999999999999988877653
No 130
>PRK08596 acetylornithine deacetylase; Validated
Probab=31.02 E-value=42 Score=33.78 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=26.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|.|+|+++++++.++++++..++.++.
T Consensus 388 ~~H~~~E~v~i~~~~~~~~~~~~~l~~~~ 416 (421)
T PRK08596 388 EAHSVNEKVEIEQLIEYTKVITAFIYEWC 416 (421)
T ss_pred ccCCCCceEEHHHHHHHHHHHHHHHHHHh
Confidence 46999999999999999999999998764
No 131
>PRK06837 acetylornithine deacetylase; Provisional
Probab=30.57 E-value=43 Score=33.74 Aligned_cols=29 Identities=24% Similarity=0.203 Sum_probs=26.7
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
-.|.|+|+++.+++.++++.+.+.+.++.
T Consensus 394 ~~H~~nE~i~i~~l~~~~~~~~~~l~~~~ 422 (427)
T PRK06837 394 GIHGFDERVDLESVRKVTKTIALFVAEWC 422 (427)
T ss_pred ccCCCCceEEHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999998764
No 132
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=28.55 E-value=35 Score=33.27 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=23.3
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
..|.|+|+++.+|+.++++++.+.|
T Consensus 336 ~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 336 HAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred cCcCcceeEEHHHHHHHHHHHHHHh
Confidence 5899999999999999999999876
No 133
>COG4943 Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]
Probab=25.09 E-value=62 Score=33.73 Aligned_cols=85 Identities=12% Similarity=0.053 Sum_probs=63.3
Q ss_pred chhhhhhhhccCCcccccCCcccccccccccCHHHHHHHHHHHHcCCCCCCCcc----ccccCCHhHHHHHHHHHHHHHH
Q 048461 34 DTTIRTMEAFSGYPIHESNSFVTNLVSSLSVDTETLQKQIDELSTFSDTPAPSV----TRVLHTENDVLARSYIKNLMGI 109 (362)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lv~i~s~~~~Gv----~r~~~s~~E~~a~~~l~~~L~~ 109 (362)
-.+.+++||.-.+....++.-+.-+++.-.+..++++..+.+..+-.+..|.=+ |-. ++.+.+...-+..++++
T Consensus 335 ~Vi~~~~~dlG~~L~~~~~l~VsINl~a~Dl~s~rli~~~~~~l~~~~v~pqQI~lElTER--~f~D~~~~~~iI~r~Re 412 (524)
T COG4943 335 YVIRNVFRDLGDLLRQHRDLHVSINLSASDLASPRLIDRLNRKLAQYQVRPQQIALELTER--TFADPKKMTPIILRLRE 412 (524)
T ss_pred HHHHHHHHHhHHHHHhCcceEEEEeeeehhhcCchHHHHHHHHHHhcCcChHHheeehhhh--hhcCchhhhHHHHHHHh
Confidence 345677999999999998888877777767788899999998887666543211 111 23455566778899999
Q ss_pred CCCeEEEcccC
Q 048461 110 SGLSVREDAVG 120 (362)
Q Consensus 110 ~Gl~v~~d~~g 120 (362)
+|.++.+|+.|
T Consensus 413 aG~~IyIDDFG 423 (524)
T COG4943 413 AGHEIYIDDFG 423 (524)
T ss_pred cCCeEEEccCc
Confidence 99999999875
No 134
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=24.22 E-value=51 Score=32.00 Aligned_cols=25 Identities=36% Similarity=0.510 Sum_probs=22.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
+..|.|+|+++.+++.++++.+.+.
T Consensus 339 ~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 339 RQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred HhCCCCCceeeHHHHHHHHHHHHHh
Confidence 3579999999999999999998764
No 135
>PRK08554 peptidase; Reviewed
Probab=23.72 E-value=67 Score=32.78 Aligned_cols=29 Identities=21% Similarity=0.313 Sum_probs=26.6
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
--|.++||++.+++.+.++++.+.+.+|.
T Consensus 409 ~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 409 NIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred CCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 36999999999999999999999998774
No 136
>PRK08737 acetylornithine deacetylase; Provisional
Probab=22.04 E-value=70 Score=31.66 Aligned_cols=27 Identities=7% Similarity=0.288 Sum_probs=24.3
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
...|.++|+++.+++.++++++.+.+.
T Consensus 336 ~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 336 AQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred hhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 346999999999999999999998875
No 137
>PF03738 GSP_synth: Glutathionylspermidine synthase preATP-grasp; InterPro: IPR005494 This region contains the Glutathionylspermidine synthase enzymatic activity 6.3.1.8 from EC. This is the C-terminal region in bienzymes such as P43675 from SWISSPROT. Glutathionylspermidine (GSP) synthetases of Trypanosomatidae and Escherichia coli couple hydrolysis of ATP (to ADP and Pi) with formation of an amide bond between spermidine and the glycine carboxylate of glutathione (gamma-Glu-Cys-Gly). In the pathogenic trypanosomatids, this reaction is the penultimate step in the biosynthesis of the antioxidant metabolite, trypanothione (N1,N8-bis-(glutathionyl)spermidine), and is a target for drug design [].; PDB: 2VPM_B 2VOB_B 2VPS_A 2IO9_A 2IO8_A 2IOB_A 2IOA_B 2IO7_B 3O98_B.
Probab=21.23 E-value=1.7e+02 Score=23.09 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=24.3
Q ss_pred CHhHHHHHHHHHHHHHHCCCeEEEcccCcEE
Q 048461 93 TENDVLARSYIKNLMGISGLSVREDAVGNIY 123 (362)
Q Consensus 93 s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvi 123 (362)
+.||..+..|+.+.++++|+++..-.+.++-
T Consensus 10 ~~ED~~t~~yL~~~a~qaG~~~~~~~i~~l~ 40 (97)
T PF03738_consen 10 YPEDRGTVQYLMDTARQAGLDTRFIPIEDLG 40 (97)
T ss_dssp -HHHHHHHHHHHHHHHHTT-EEEEETTTTEE
T ss_pred ChHHHHHHHHHHHHHHHCCCCeEEechHheE
Confidence 5789999999999999999998766666643
Done!