Query 048461
Match_columns 362
No_of_seqs 223 out of 1893
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 16:54:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 5.1E-42 1.8E-46 341.3 31.5 276 64-357 2-308 (408)
2 1z2l_A Allantoate amidohydrola 100.0 1.5E-38 5.1E-43 317.3 24.9 276 63-357 5-312 (423)
3 2v8h_A Beta-alanine synthase; 100.0 3.6E-38 1.2E-42 320.2 25.6 275 60-356 25-342 (474)
4 3gb0_A Peptidase T; NP_980509. 100.0 2.9E-31 1E-35 260.1 20.9 243 64-357 3-273 (373)
5 3rza_A Tripeptidase; phosphory 100.0 1.1E-30 3.7E-35 258.7 20.2 249 57-357 14-293 (396)
6 3pfo_A Putative acetylornithin 100.0 1.4E-29 4.6E-34 253.0 27.5 241 64-357 23-322 (433)
7 3ife_A Peptidase T; metallopep 100.0 1.2E-30 4.3E-35 261.5 18.9 249 65-357 25-329 (434)
8 1xmb_A IAA-amino acid hydrolas 100.0 3.3E-29 1.1E-33 250.0 25.9 244 67-357 28-292 (418)
9 3ct9_A Acetylornithine deacety 100.0 1.8E-29 6.2E-34 246.9 22.7 236 66-353 10-268 (356)
10 1ysj_A Protein YXEP; M20 famil 100.0 6.7E-29 2.3E-33 246.8 26.8 247 66-357 31-300 (404)
11 3ram_A HMRA protein; two-domai 100.0 1.9E-29 6.5E-34 250.3 21.9 243 64-358 13-266 (394)
12 1cg2_A Carboxypeptidase G2; me 100.0 2E-29 6.9E-34 249.1 21.4 243 64-354 16-285 (393)
13 3io1_A Aminobenzoyl-glutamate 100.0 1.1E-28 3.9E-33 248.4 24.9 247 64-357 11-324 (445)
14 2rb7_A Peptidase, M20/M25/M40 100.0 1.1E-28 3.7E-33 242.0 23.4 241 65-353 4-270 (364)
15 1vgy_A Succinyl-diaminopimelat 100.0 2.4E-28 8.1E-33 241.5 24.5 243 63-354 2-280 (393)
16 3tx8_A Succinyl-diaminopimelat 100.0 1.1E-28 3.8E-33 241.4 18.5 238 66-354 12-275 (369)
17 3isz_A Succinyl-diaminopimelat 100.0 2.5E-27 8.6E-32 231.3 23.9 240 66-354 2-277 (377)
18 1fno_A Peptidase T; metallo pe 100.0 3E-27 1E-31 235.3 21.7 244 67-356 2-301 (417)
19 2f7v_A Aectylcitrulline deacet 100.0 3.2E-27 1.1E-31 231.6 19.6 235 61-353 3-269 (369)
20 2pok_A Peptidase, M20/M25/M40 99.9 8.8E-26 3E-30 228.9 23.7 252 65-356 41-379 (481)
21 2zog_A Cytosolic non-specific 99.9 1.9E-25 6.5E-30 225.9 21.5 257 63-357 16-369 (479)
22 2qyv_A XAA-His dipeptidase; YP 99.9 1.5E-25 5.1E-30 227.7 20.0 222 64-332 8-271 (487)
23 3dlj_A Beta-Ala-His dipeptidas 99.9 1.3E-24 4.5E-29 220.8 25.9 257 63-357 21-376 (485)
24 3mru_A Aminoacyl-histidine dip 99.9 2.1E-25 7.1E-30 227.4 16.9 242 63-357 10-292 (490)
25 3pfe_A Succinyl-diaminopimelat 99.9 1.6E-24 5.6E-29 219.5 21.5 255 67-355 18-361 (472)
26 1lfw_A PEPV; hydrolase, dipept 99.9 6.6E-22 2.3E-26 199.5 23.2 264 64-354 11-369 (470)
27 3khx_A Putative dipeptidase sa 99.9 1.4E-21 4.8E-26 199.1 24.9 263 63-354 30-392 (492)
28 4h2k_A Succinyl-diaminopimelat 99.7 1.7E-16 5.6E-21 149.4 14.2 107 66-197 5-138 (269)
29 3t68_A Succinyl-diaminopimelat 99.6 1.2E-15 4E-20 143.4 13.0 108 65-197 4-138 (268)
30 1q7l_A Aminoacylase-1; catalys 99.6 1.5E-15 5E-20 136.7 11.7 164 63-262 6-198 (198)
31 2wzn_A TET3, 354AA long hypoth 99.6 2.2E-17 7.6E-22 155.0 -2.3 67 70-156 12-78 (354)
32 2fvg_A Endoglucanase; TM1049, 99.5 1.3E-14 4.3E-19 140.9 6.1 64 72-154 3-66 (340)
33 1tkj_A Aminopeptidase, SGAP; d 99.5 8.1E-14 2.8E-18 132.1 9.3 105 63-178 3-115 (284)
34 3gux_A Putative Zn-dependent e 99.4 1.9E-12 6.5E-17 124.8 13.4 106 63-185 23-154 (314)
35 1vhe_A Aminopeptidase/glucanas 99.4 3.5E-12 1.2E-16 125.2 13.8 70 66-154 6-75 (373)
36 1rtq_A Bacterial leucyl aminop 99.4 1.3E-12 4.3E-17 124.7 10.2 101 63-178 16-135 (299)
37 3tc8_A Leucine aminopeptidase; 99.4 4.7E-12 1.6E-16 121.8 14.0 106 63-185 21-152 (309)
38 2wyr_A Cobalt-activated peptid 99.4 1.9E-12 6.4E-17 124.9 10.7 64 69-154 4-67 (332)
39 1y0y_A FRV operon protein FRVX 99.3 3.5E-12 1.2E-16 124.2 11.1 65 69-154 8-73 (353)
40 2gre_A Deblocking aminopeptida 99.3 7E-12 2.4E-16 122.0 8.5 72 63-153 2-73 (349)
41 2afw_A Glutaminyl-peptide cycl 99.1 1.2E-10 4.2E-15 112.5 10.2 95 64-177 28-144 (329)
42 1vho_A Endoglucanase; structur 99.1 2.5E-10 8.4E-15 110.5 9.1 68 67-154 5-72 (346)
43 1ylo_A Hypothetical protein SF 99.0 5.2E-10 1.8E-14 108.1 9.5 64 71-154 7-70 (348)
44 4fuu_A Leucine aminopeptidase; 99.0 4.8E-09 1.6E-13 100.4 14.2 102 63-181 21-148 (309)
45 3pb6_X Glutaminyl-peptide cycl 99.0 2.5E-09 8.4E-14 103.7 10.6 95 64-177 36-151 (330)
46 3kl9_A PEPA, glutamyl aminopep 98.9 2.1E-09 7E-14 105.2 8.5 71 67-155 3-73 (355)
47 3cpx_A Aminopeptidase, M42 fam 98.9 3.9E-10 1.3E-14 108.6 1.5 66 67-154 17-89 (321)
48 2vpu_A TET3, 354AA long hypoth 98.7 1.2E-08 4.1E-13 99.8 6.0 67 68-155 10-77 (354)
49 4f9u_A CG32412; alpha/beta hyd 98.6 1.9E-07 6.7E-12 89.1 12.4 94 65-177 9-120 (312)
50 3isx_A Endoglucanase; TM1050, 98.6 5.7E-08 2E-12 94.5 6.8 67 68-155 12-78 (343)
51 4fai_A CG5976, isoform B; alph 98.5 5.3E-07 1.8E-11 87.1 12.4 94 65-177 36-146 (330)
52 2ek8_A Aminopeptidase; metallo 98.3 1.1E-06 3.7E-11 87.5 7.7 90 85-185 162-265 (421)
53 3iib_A Peptidase M28; YP_92679 97.7 3.4E-05 1.2E-09 77.3 5.3 52 119-178 235-287 (444)
54 3fed_A Glutamate carboxypeptid 96.8 0.0011 3.7E-08 70.1 5.9 51 118-177 311-361 (707)
55 3kas_A Transferrin receptor pr 96.0 0.007 2.4E-07 63.3 5.9 51 118-177 265-315 (640)
56 1y7e_A Probable M18-family ami 92.4 0.067 2.3E-06 53.7 3.2 51 95-154 34-100 (458)
57 2ijz_A Probable M18-family ami 91.6 0.061 2.1E-06 53.5 1.9 54 93-154 15-86 (428)
58 2glf_A Probable M18-family ami 90.3 0.32 1.1E-05 48.6 5.7 52 95-154 32-97 (450)
59 2ek8_A Aminopeptidase; metallo 82.9 2 6.8E-05 42.0 6.6 49 63-119 12-60 (421)
60 2glj_A Probable M18-family ami 81.4 0.38 1.3E-05 48.2 0.8 25 331-355 434-458 (461)
61 3k9t_A Putative peptidase; str 76.8 3 0.0001 41.2 5.5 41 133-177 173-213 (435)
62 1q7l_B Aminoacylase-1; catalys 75.5 1.7 5.7E-05 32.7 2.7 30 332-361 51-80 (88)
63 3iib_A Peptidase M28; YP_92679 74.3 4 0.00014 40.2 5.9 47 66-119 20-68 (444)
64 3khx_A Putative dipeptidase sa 62.5 3.8 0.00013 40.8 2.8 32 330-361 459-490 (492)
65 3fed_A Glutamate carboxypeptid 60.1 11 0.00036 39.7 5.8 48 63-118 21-69 (707)
66 3isz_A Succinyl-diaminopimelat 59.2 3.8 0.00013 38.6 2.0 31 331-361 346-376 (377)
67 3n5f_A L-carbamoylase, N-carba 56.6 8.5 0.00029 36.9 4.1 40 321-361 364-407 (408)
68 1vho_A Endoglucanase; structur 53.1 5.8 0.0002 37.3 2.2 31 331-361 306-336 (346)
69 3mru_A Aminoacyl-histidine dip 52.8 5.8 0.0002 39.5 2.2 31 331-361 458-488 (490)
70 3tx8_A Succinyl-diaminopimelat 51.4 5.5 0.00019 37.6 1.7 27 331-357 342-368 (369)
71 1z2l_A Allantoate amidohydrola 51.3 12 0.0004 36.0 4.1 30 332-361 382-411 (423)
72 3rza_A Tripeptidase; phosphory 48.7 8.5 0.00029 36.7 2.6 31 331-361 363-393 (396)
73 3ife_A Peptidase T; metallopep 48.5 6.8 0.00023 38.1 1.9 30 332-361 403-432 (434)
74 1ylo_A Hypothetical protein SF 46.6 6.9 0.00023 36.7 1.5 30 331-360 308-337 (348)
75 2v8h_A Beta-alanine synthase; 44.9 15 0.0005 36.2 3.7 30 331-360 417-446 (474)
76 3pfo_A Putative acetylornithin 44.1 11 0.00038 36.3 2.6 31 331-361 399-429 (433)
77 3kas_A Transferrin receptor pr 44.0 13 0.00044 38.6 3.3 49 64-117 15-64 (640)
78 2vpu_A TET3, 354AA long hypoth 43.8 9.7 0.00033 36.4 2.1 31 331-361 319-349 (354)
79 3dlj_A Beta-Ala-His dipeptidas 40.7 12 0.00042 36.8 2.4 31 331-361 453-483 (485)
80 3gb0_A Peptidase T; NP_980509. 40.2 14 0.00047 34.8 2.6 29 331-359 343-371 (373)
81 3pfe_A Succinyl-diaminopimelat 36.5 17 0.00058 35.7 2.6 41 321-361 424-470 (472)
82 3kl9_A PEPA, glutamyl aminopep 36.0 12 0.00042 35.7 1.4 30 331-360 316-345 (355)
83 1lfw_A PEPV; hydrolase, dipept 35.6 19 0.00065 35.0 2.8 30 332-361 437-466 (470)
84 1fno_A Peptidase T; metallo pe 35.5 18 0.00062 34.6 2.6 30 332-361 377-406 (417)
85 1vgy_A Succinyl-diaminopimelat 34.7 14 0.00048 35.1 1.7 30 332-361 350-379 (393)
86 2rb7_A Peptidase, M20/M25/M40 33.2 16 0.00056 34.4 1.9 28 334-361 333-360 (364)
87 2qyv_A XAA-His dipeptidase; YP 33.2 19 0.00064 35.4 2.4 31 331-361 456-486 (487)
88 1ysj_A Protein YXEP; M20 famil 32.3 26 0.00088 33.5 3.1 29 332-360 372-400 (404)
89 2zog_A Cytosolic non-specific 29.5 26 0.00088 34.1 2.6 31 331-361 446-476 (479)
90 1xmb_A IAA-amino acid hydrolas 29.5 29 0.00099 33.3 3.0 29 332-360 374-402 (418)
91 3ct9_A Acetylornithine deacety 27.7 20 0.0007 33.6 1.5 30 331-360 326-355 (356)
92 3vat_A Dnpep, aspartyl aminope 27.3 1.1E+02 0.0037 30.7 6.7 29 331-359 458-486 (496)
93 1cg2_A Carboxypeptidase G2; me 27.0 23 0.00078 33.6 1.7 31 331-361 360-391 (393)
94 2pok_A Peptidase, M20/M25/M40 26.3 27 0.00094 34.1 2.2 29 331-359 452-480 (481)
95 2f7v_A Aectylcitrulline deacet 24.4 31 0.001 32.4 2.0 28 331-358 340-367 (369)
96 4eme_A M18 aspartyl aminopepti 22.3 1.8E+02 0.0061 29.7 7.2 30 331-360 532-561 (571)
97 2kkt_A Ataxin-7-like protein 3 22.1 31 0.0011 25.9 1.2 42 2-50 31-72 (84)
98 3io1_A Aminobenzoyl-glutamate 21.8 30 0.001 33.6 1.4 29 332-360 404-432 (445)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=5.1e-42 Score=341.27 Aligned_cols=276 Identities=34% Similarity=0.494 Sum_probs=231.7
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCce
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~ 143 (362)
++.++++++|++|++|++++++|++|+++|++|.++++||+++|+++|+++++|..+|+++ +++|+++++|+
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~~gnv~a--------~~~g~~~~~~~ 73 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIG--------RKEGTNPDATV 73 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECTTCCEEE--------EECCSSTTSCE
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcCCCCEEE--------EecCCCCCCCE
Confidence 5789999999999999998889999999999999999999999999999999999999999 99886544689
Q ss_pred EEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCC------------------------
Q 048461 144 VATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGK------------------------ 197 (362)
Q Consensus 144 Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~------------------------ 197 (362)
|+|++||||||.+|.||++.|+++++++++.|+... +.+++. +..+.|||
T Consensus 74 i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~----~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~ 149 (408)
T 3n5f_A 74 VLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIE----VVAFTDEEGARFRFGMIGSRAMAGTLPPEALE 149 (408)
T ss_dssp EEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEE----EEEESCSSCTTTTCCCHHHHHHHTCCCGGGGS
T ss_pred EEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCEE----EEEEcCccccccCCCCcCHHHHHcCCCHHHhh
Confidence 999999999999999999999999999999997432 455554 22345554
Q ss_pred -----cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCC
Q 048461 198 -----NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAG 272 (362)
Q Consensus 198 -----G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg 272 (362)
|.++.+++.+.|+.++. +.....++.++++++++|++||+++|+++.+.+++.+++|..+++|+++|+++|+|
T Consensus 150 ~~~~~G~~~~~~l~~~G~~~~~--~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hag 227 (408)
T 3n5f_A 150 CRDAEGISLAEAMKQAGLDPDR--LPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAG 227 (408)
T ss_dssp CBCTTCCBHHHHHHHTTCCGGG--GGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETT
T ss_pred ccCCCCCCHHHHHHHhCCChhh--hhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCC
Confidence 33344556667765431 22221233468899999999999999888899999999999999999999999997
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHH
Q 048461 273 AVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVL 352 (362)
Q Consensus 273 ~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l 352 (362)
+.||..++||+.++++++.+|+++..+.. .+++|||.|++||++.|+||++|++++++|..|.| +.+++.+.++.+
T Consensus 228 s~P~~~g~nAi~~aa~~i~~l~~~~~~~~--~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~--~~~~i~~~i~~~ 303 (408)
T 3n5f_A 228 ATPMSLRRDPMAAAAQIIIVIEEEARRTG--TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAE--VRDQVWKAIAVR 303 (408)
T ss_dssp TSCTTTCCCHHHHHHHHHHHHHHHHHHHS--SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHH--HHHHHHHHHHHH
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHhcC--CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHH--HHHHHHHHHHHH
Confidence 78964579999999999999999875443 68999999998668999999999999999999998 788888888887
Q ss_pred HHHHH
Q 048461 353 ALTLA 357 (362)
Q Consensus 353 ~~~l~ 357 (362)
++.+.
T Consensus 304 ~~~~a 308 (408)
T 3n5f_A 304 AETIA 308 (408)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 2
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.5e-38 Score=317.26 Aligned_cols=276 Identities=28% Similarity=0.389 Sum_probs=223.2
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCc
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
..+.++++++|++|++|+|++++|++|+.+|++|.++++||+++|+++|+++++|..+|+++ +++|++++.|
T Consensus 5 ~~~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~~gnv~a--------~~~g~~~~~~ 76 (423)
T 1z2l_A 5 THFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYG--------RLNGTEYPQE 76 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEE--------EECCSSEEEE
T ss_pred cccHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEE--------EEcCCCCCCC
Confidence 34678999999999999999888999999999999999999999999999999999999999 9987543348
Q ss_pred eEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcc------hHHHHH---------
Q 048461 143 SVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNI------SFLDAA--------- 205 (362)
Q Consensus 143 ~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~------~~~e~~--------- 205 (362)
+|+|.|||||||.+|++||+.|++++|++++.|+... +.+++. +..+.|||+. .....+
T Consensus 77 ~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~----~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 152 (423)
T 1z2l_A 77 VVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVE----VVAMAEEEGSRFPYVFWGSKNIFGLANPDDV 152 (423)
T ss_dssp EEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEE----EEEESCSSCCSSSCSCHHHHHHTTCCCGGGT
T ss_pred EEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCEE----EEEEcCccccccCCCcccHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999987432 455555 3345666531 112222
Q ss_pred ---------------HHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCC
Q 048461 206 ---------------RSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGH 270 (362)
Q Consensus 206 ---------------ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aH 270 (362)
.+.|+.+ ++..-...+++++++++|+++|+++++++.+.+++.+++|..+++|+++|+++|
T Consensus 153 ~~~~~~d~~~~~~~~~~~G~~~----~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~H 228 (423)
T 1z2l_A 153 RNICDAKGNSFVDAMKACGFTL----PNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNH 228 (423)
T ss_dssp SSCCCSSSCCHHHHHHHTTCCC----CSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEE
T ss_pred hhhcCcCCcCHHHHHHHcCCcc----ccccccCCCCceEEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCC
Confidence 2222210 000000013578899999999998888777889999999999999999999999
Q ss_pred CCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHH
Q 048461 271 AGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVK 350 (362)
Q Consensus 271 Ag~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~ 350 (362)
||+.|+..|+||+.++++++.+|+++..+.. +.+++|+|.|+++|++.|+||++|++++|+|..|.+ +.+++.+.++
T Consensus 229 a~~~P~~~g~nAi~~~a~~i~~l~~~~~~~~-~~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~--~~~~i~~~i~ 305 (423)
T 1z2l_A 229 AGTTPMGYRRDTVYAFSRICHQSVEKAKRMG-DPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAA--VLRDFTQQLE 305 (423)
T ss_dssp TTTSCGGGCCCHHHHHHHHHHHHHHHHHHHC-TTCEEECCCEEEESCCTTEECCEEEEEEEEEESSHH--HHHHHHHHHH
T ss_pred CCCCccccCcCHHHHHHHHHHHHHHHHHhcC-CCceEEEEEEeecCCcceeECCEEEEEEEeeCCCHH--HHHHHHHHHH
Confidence 9877863479999999999999998766543 367999999998668999999999999999999998 7788888888
Q ss_pred HHHHHHH
Q 048461 351 VLALTLA 357 (362)
Q Consensus 351 ~l~~~l~ 357 (362)
.+++.+.
T Consensus 306 ~~~~~~~ 312 (423)
T 1z2l_A 306 NDMRAIC 312 (423)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776543
No 3
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=3.6e-38 Score=320.16 Aligned_cols=275 Identities=30% Similarity=0.426 Sum_probs=223.3
Q ss_pred cccccCHHHHHHHHHHH-HcCCCC------C-CCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCc
Q 048461 60 SSLSVDTETLQKQIDEL-STFSDT------P-APSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSR 131 (362)
Q Consensus 60 ~~~~~~~~~l~~~l~~L-v~i~s~------~-~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~ 131 (362)
+.|.++.++++++|++| ++|+|+ + .+|++|+++|++|.++++||+++|+++|+++++|..||+++
T Consensus 25 ~~~~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d~~gnvia------- 97 (474)
T 2v8h_A 25 APLSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKIGNMFA------- 97 (474)
T ss_dssp --CCCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEBTTCCEEE-------
T ss_pred ccccCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEecCceEEE-------
Confidence 34568889999999999 999987 3 68999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCCceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc-----------
Q 048461 132 GVWIGNEAELASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN----------- 198 (362)
Q Consensus 132 ~~~~G~~~~~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G----------- 198 (362)
+++|+++ +|+|+|.||+||||.+|+||++.|++++|++++.|+... +.+++. +..+.|||+
T Consensus 98 -~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~----lif~~dEE~~~~~~g~~Gs~ 171 (474)
T 2v8h_A 98 -VYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNNYVPNYDVC----VVVWFNAEGARFARSCTGSS 171 (474)
T ss_dssp -EECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHTCCCSSCEE----EEECTTCSCSSSSCTTHHHH
T ss_pred -EECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCEE----EEEECCccCCCCCCCcccHH
Confidence 9987543 468999999999999999999999999999999987532 455555 334566653
Q ss_pred ----------------------chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeec
Q 048461 199 ----------------------ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAA 256 (362)
Q Consensus 199 ----------------------~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG 256 (362)
..+.+++.+.|+.++. +..+..+++++++++|++||++++..+...+++++++|
T Consensus 172 ~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~----~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G 247 (474)
T 2v8h_A 172 VWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDT----PASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQA 247 (474)
T ss_dssp HHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSB----CSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECE
T ss_pred HHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccc----cccccccchhhheeeeeccCccccccCCcceeEEeecc
Confidence 1111222223332100 00111246789999999999988877778899999999
Q ss_pred ceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCC
Q 048461 257 PASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKP 336 (362)
Q Consensus 257 ~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p 336 (362)
..+++|+++|+++|||..|+..|+|||.++++++.+|+++..+. .+++|+|.|++||++.|+||++|++++|+|..|
T Consensus 248 ~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~---~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~ 324 (474)
T 2v8h_A 248 YNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH---NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPS 324 (474)
T ss_dssp EEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT---TCEEECCCEEEESCCTTEECSEEEEEEEEEESC
T ss_pred eEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc---CCEEEEEEEEecCCCCceeCCEEEEEEEecCCC
Confidence 99999999999999987797337999999999999999876542 579999999986589999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 048461 337 EEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 337 ~E~~~~ed~~~gi~~l~~~l 356 (362)
.+ +.+++.+.++.+++..
T Consensus 325 ~~--~~~~i~~~i~~~~~~~ 342 (474)
T 2v8h_A 325 DD--VLATMLKEAAAEFDRL 342 (474)
T ss_dssp HH--HHHHHHHHHHHHHHHH
T ss_pred hH--HHHHHHHHHHHHHHHH
Confidence 98 7788888887776654
No 4
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.97 E-value=2.9e-31 Score=260.15 Aligned_cols=243 Identities=20% Similarity=0.159 Sum_probs=187.6
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc--------CcEEEeccCCCceeee
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV--------GNIYGEISSSSRGVWI 135 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~--------gNvia~~~~~~~~~~~ 135 (362)
++.++++++|++|++||+. |.+|.++++||+++|+++|+++++|.. +|+++ +++
T Consensus 3 ~~~~~~~~~l~~l~~~ps~----------s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a--------~~~ 64 (373)
T 3gb0_A 3 INQERLVNEFMELVQVDSE----------TKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLIC--------TLP 64 (373)
T ss_dssp SCHHHHHHHHHHHHTSCCB----------TTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEE--------EEC
T ss_pred CCHHHHHHHHHHHhcccCC----------CccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEE--------Eec
Confidence 6889999999999999985 567899999999999999999998874 79999 998
Q ss_pred CCCCCCceEEEEecccCCCCCCcc-------------------ccHHHHHHHHHHHHHhhhcc-cccccchhhhhccccc
Q 048461 136 GNEAELASVATGSHIDAIPYSGKY-------------------DGVTGVLGALEAINVLKSRL-LAGIESLAKDLTSIVD 195 (362)
Q Consensus 136 G~~~~~p~Ill~sHlDTVp~gG~~-------------------Dg~~Gv~aal~a~~~L~s~~-~~g~~~~~e~l~~~~D 195 (362)
|+++++|+|+|+|||||||+++.| |++.|+++++++++.|+... +.+++. +..+.|
T Consensus 65 g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~----~~~~~~ 140 (373)
T 3gb0_A 65 ATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNIPHGTIE----FIITVG 140 (373)
T ss_dssp CSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTCCCCCEE----EEEESC
T ss_pred CCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCCCCCCEE----EEEEec
Confidence 763346899999999999976544 88899999999999987533 446655 344577
Q ss_pred CCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCC
Q 048461 196 GKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVL 275 (362)
Q Consensus 196 ~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P 275 (362)
||+ |..++..+.. ..++..+.+|.+ ++....+++.+.+|..+++|+++|+++|++..|
T Consensus 141 EE~----------g~~Ga~~~~~------~~~~~~~~~~~~------~~~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p 198 (373)
T 3gb0_A 141 EES----------GLVGAKALDR------ERITAKYGYALD------SDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAP 198 (373)
T ss_dssp GGG----------TSHHHHHSCG------GGCCCSEEEEEE------ECSCTTEEEEEECEEEEEEEEEECBCCBTTTCG
T ss_pred ccc----------CchhhhhhCH------HhcCCCEEEEEc------CCCCCCeEEEcCCCcEEEEEEEEeEecCCCCCh
Confidence 653 1111111111 012222334443 333345688889999999999999999998679
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 276 MPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 276 ~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
+. ++||+.++++++.+|+.. +.. +.+++|||.|++ |++.|+||++|++++|+|..|.| +.+++.+.++.+++.
T Consensus 199 ~~-g~nai~~~~~~i~~l~~~--~~~-~~~~~~vg~i~g-G~~~Nvip~~~~~~~d~R~~~~~--~~~~~~~~i~~~~~~ 271 (373)
T 3gb0_A 199 EK-GVSAITIAAKAIAKMPLG--RID-SETTANIGRFEG-GTQTNIVCDHVQIFAEARSLINE--KMEAQVAKMKEAFET 271 (373)
T ss_dssp GG-SBCHHHHHHHHHTTSCCE--EEE-TTEEEEEEEEEE-CSCTTBCCCEEEEEEEEEESSHH--HHHHHHHHHHHHHHH
T ss_pred hh-CcCHHHHHHHHHHhcccc--cCC-CccccceeEEec-CcccccccceEEEEEEEecCCHH--HHHHHHHHHHHHHHH
Confidence 87 589999999999988652 222 467899999997 58999999999999999999998 778888877777665
Q ss_pred HH
Q 048461 356 LA 357 (362)
Q Consensus 356 l~ 357 (362)
+.
T Consensus 272 ~~ 273 (373)
T 3gb0_A 272 TA 273 (373)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 5
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.1e-30 Score=258.65 Aligned_cols=249 Identities=20% Similarity=0.138 Sum_probs=187.5
Q ss_pred ccccccccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc--------cCcEEEeccC
Q 048461 57 NLVSSLSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA--------VGNIYGEISS 128 (362)
Q Consensus 57 ~~~~~~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~--------~gNvia~~~~ 128 (362)
.+-.++.++.+++++++++|++||++ |.+|.++++||+++|+++|+++++|. .+|++|
T Consensus 14 ~~~~~~~~~~~~~~~~l~~L~~ips~----------s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia---- 79 (396)
T 3rza_A 14 NLYFQGMINEQRLLNTFLELVQIDSE----------TGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVC---- 79 (396)
T ss_dssp -----CCSCHHHHHHHHHHHHTSCCB----------TTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEE----
T ss_pred ceeEEEeecHHHHHHHHHHHeecCCC----------CcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEE----
Confidence 33455678999999999999999985 46788999999999999999999876 479999
Q ss_pred CCceeeeCC--CCCCceEEEEecccCCCCCCcc--------------------ccHHHHHHHHHHHHHhhhcc-cccccc
Q 048461 129 SSRGVWIGN--EAELASVATGSHIDAIPYSGKY--------------------DGVTGVLGALEAINVLKSRL-LAGIES 185 (362)
Q Consensus 129 ~~~~~~~G~--~~~~p~Ill~sHlDTVp~gG~~--------------------Dg~~Gv~aal~a~~~L~s~~-~~g~~~ 185 (362)
+++|+ ++++|+|+|+|||||||+++.| |++.|++++|.+++.|+... +.+++.
T Consensus 80 ----~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~ 155 (396)
T 3rza_A 80 ----TMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQ 155 (396)
T ss_dssp ----EECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred ----EECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 99875 1246899999999999976433 78899999999999987433 346665
Q ss_pred hhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEE
Q 048461 186 LAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFE 265 (362)
Q Consensus 186 ~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~ 265 (362)
+..+.|||+ |..+...++.+ .++..+.+|.+++ .....++++.+|..+++|+++
T Consensus 156 ----~~~~~~EE~----------g~~Ga~~~~~~------~~~~~~~~~~~~~------~~~g~i~~~~~g~~~~~i~v~ 209 (396)
T 3rza_A 156 ----FVITVGEES----------GLIGAKELNSE------LLDADFGYAIDAS------ADVGTTVVGAPTQMLISAKII 209 (396)
T ss_dssp ----EEEESCGGG----------TSHHHHHCCGG------GCCCSEEEEEEES------SCTTCEEEEECEEEEEEEEEE
T ss_pred ----EEEEccccc----------ccHhHhhhchh------hcccceEEEEecC------CCcceEEEcCCceEEEEEEEE
Confidence 344577653 21111111111 1222344555432 233457888899999999999
Q ss_pred eeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHH
Q 048461 266 GTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDM 345 (362)
Q Consensus 266 G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~ 345 (362)
|+++|+| .|+. ++||+.++++++.+|+... .. +.+++|||.|++ |++.|+||++|++++|+|..|.+ +.+++
T Consensus 210 G~~~Ha~-~p~~-g~nai~~~~~~i~~l~~~~--~~-~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~--~~~~~ 281 (396)
T 3rza_A 210 GKTAHAS-TPKE-GVSAINIAAKAISRMKLGQ--VD-EITTANIGKFHG-GSATNIVADEVILEAEARSHDPE--RIKTQ 281 (396)
T ss_dssp CBCCBTT-SGGG-SBCHHHHHHHHHHHSCCEE--EE-TTEEEEEEEEEE-CSCTTBCCCEEEEEEEEEESSHH--HHHHH
T ss_pred eEecCCC-Cccc-cccHHHHHHHHHHhcccCC--CC-CCceeeeeEEec-CCCCcccCceEEEEEEEEeCCHH--HHHHH
Confidence 9999998 8986 5899999999999887531 22 468899999997 58999999999999999999998 77888
Q ss_pred HHHHHHHHHHHH
Q 048461 346 ENGVKVLALTLA 357 (362)
Q Consensus 346 ~~gi~~l~~~l~ 357 (362)
.+.++.+++.+.
T Consensus 282 ~~~i~~~~~~~a 293 (396)
T 3rza_A 282 VKHMTDVFETTA 293 (396)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887776544
No 6
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.97 E-value=1.4e-29 Score=252.99 Aligned_cols=241 Identities=15% Similarity=0.116 Sum_probs=187.4
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE----------------------cccCc
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE----------------------DAVGN 121 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~----------------------d~~gN 121 (362)
.+.+++++++++|++||++ |.+|.++++||+++|+++|+++++ +..+|
T Consensus 23 ~~~~~~~~~l~~l~~~ps~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (433)
T 3pfo_A 23 RNFNDQVAFLQRMVQFRSV----------RGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQ 92 (433)
T ss_dssp HHHHHHHHHHHHHHTSCCB----------TTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEE
T ss_pred hhHHHHHHHHHHHhcCCCC----------CCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcE
Confidence 3468899999999999985 457889999999999999998875 33479
Q ss_pred EEEeccCCCceeeeCCCCCCceEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhc-
Q 048461 122 IYGEISSSSRGVWIGNEAELASVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSR- 178 (362)
Q Consensus 122 via~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~- 178 (362)
+++ +++|+. ++|+|+|.+||||||.+ |..|++.|+++++++++.|+..
T Consensus 93 via--------~~~g~~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~ 163 (433)
T 3pfo_A 93 VVA--------TADSDG-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAG 163 (433)
T ss_dssp EEE--------EECCCC-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred EEE--------EEecCC-CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcC
Confidence 999 998743 46899999999999975 3458899999999999998754
Q ss_pred -ccccccchhhhhcccccCCc-chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeec
Q 048461 179 -LLAGIESLAKDLTSIVDGKN-ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAA 256 (362)
Q Consensus 179 -~~~g~~~~~e~l~~~~D~~G-~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG 256 (362)
.+.+++. +..+.|||. ......+.+.|.+ .+..+ +.|++ ...++.+++|
T Consensus 164 ~~~~~~v~----~~~~~~EE~g~~G~~~~~~~~~~---------------~d~~i--------~~ep~--~~~i~~~~~G 214 (433)
T 3pfo_A 164 YAPDARVH----VQTVTEEESTGNGALSTLMRGYR---------------ADACL--------IPEPT--GHTLTRAQVG 214 (433)
T ss_dssp EEESSCEE----EEEESCTTTTCHHHHHHHHTTCC---------------CSEEE--------ECCCC--SSCEEEEECE
T ss_pred CCCCccEE----EEEEecCccCChhHHHHHhcCCC---------------CCEEE--------EeCCC--CCceEEecce
Confidence 2466665 344678763 2233333333432 12222 22222 2368889999
Q ss_pred ceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhh------CC------CCeEEEEEEEEecCCccceecC
Q 048461 257 PASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLES------GS------IDTVGTVGILELHPGAINSIPI 324 (362)
Q Consensus 257 ~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~------~~------~~~t~tvG~I~~gg~a~NvVP~ 324 (362)
..+++|+++|+++|+| .|+. ++||+.++++++.+|+++..+. ++ .++++|||.|++ |++.|+||+
T Consensus 215 ~~~~~i~v~G~~~Ha~-~p~~-g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~g-G~~~NvIP~ 291 (433)
T 3pfo_A 215 AVWFRLRVRGTPVHVA-YSET-GTSAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKG-GDWASSTAA 291 (433)
T ss_dssp EEEEEEEEECCCCBGG-GGGG-SCCHHHHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEE-CSCTTBCCC
T ss_pred EEEEEEEEEcCCCccC-CCCc-CcCHHHHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEEC-CCCCcccCc
Confidence 9999999999999998 7875 6999999999999999876432 11 246899999997 589999999
Q ss_pred eEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 325 KSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 325 ~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+|++.+++|..|.| +.+++.+.++.+++.+.
T Consensus 292 ~a~~~~~iR~~~~~--~~~~~~~~i~~~~~~~~ 322 (433)
T 3pfo_A 292 WCELDCRLGLLTGD--TPQEAMRGIEKCLADAQ 322 (433)
T ss_dssp EEEEEEEEEECTTC--CHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCCCC--CHHHHHHHHHHHHHHHh
Confidence 99999999999999 88999998888877654
No 7
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.97 E-value=1.2e-30 Score=261.50 Aligned_cols=249 Identities=16% Similarity=0.109 Sum_probs=194.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCCC-CCc
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNEA-ELA 142 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~~-~~p 142 (362)
..++++++|.+|++|+|+++++.+|..++..|.++++||+++|+++|++ +++|+.+|+++ +++|+.+ ++|
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a--------~~~g~~~~~~~ 96 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMA--------TLPANTDKDVP 96 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEE--------EECCBSSSCCC
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEECCCcEEEE--------EeCCCCCCCCC
Confidence 3578999999999999998888999999999999999999999999996 99999999999 9987643 368
Q ss_pred eEEEEecccCCCCC-C---------c------------------------------------------cccHHHHHHHHH
Q 048461 143 SVATGSHIDAIPYS-G---------K------------------------------------------YDGVTGVLGALE 170 (362)
Q Consensus 143 ~Ill~sHlDTVp~g-G---------~------------------------------------------~Dg~~Gv~aal~ 170 (362)
+|+|.||+||||.. | . .|+|+|++++|+
T Consensus 97 ~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~ 176 (434)
T 3ife_A 97 VIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMV 176 (434)
T ss_dssp CEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHH
Confidence 99999999999861 1 1 456899999999
Q ss_pred HHHHhhhc--ccccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCcee
Q 048461 171 AINVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSI 248 (362)
Q Consensus 171 a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~ 248 (362)
+++.|+.. .+.+++. +..+.||| .| .+...+..+ .+ ..+..+.+| +++ ..
T Consensus 177 a~~~L~~~~~~~~~~i~----~if~~~EE----------~g-~Ga~~~~~~-~~---~~d~~~~~d--------~~~-~g 228 (434)
T 3ife_A 177 AMNYLIHNPQIKHGKIR----VAFTPDEE----------IG-RGPAHFDVE-AF---GASFAYMMD--------GGP-LG 228 (434)
T ss_dssp HHHHHHTCTTSCBCCEE----EEEESCGG----------GT-CTGGGCCHH-HH---CCSEEEECC--------CCS-TT
T ss_pred HHHHHHhCCCCCCCCEE----EEEECCcc----------cC-hHHHHhhhh-hc---CCCEEEEec--------CCC-CC
Confidence 99999754 2456665 34457754 33 233222211 11 233444333 121 12
Q ss_pred eEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEE
Q 048461 249 GIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQL 328 (362)
Q Consensus 249 giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l 328 (362)
.++++++|..+++|+++|+++|||+.|+. ++|||.++++++.+|+++..+ ..++.++|+|+. +.+|+||++|++
T Consensus 229 ~i~~~~~G~~~~~i~v~G~~~Hag~~P~~-g~nAi~~aa~~i~~l~~~~~~---~~~~~~~g~i~~--g~~n~iP~~a~~ 302 (434)
T 3ife_A 229 GLEYESFNAAGAKLTFNGTNTHPGTAKNK-MRNATKLAMEFNGHLPVEEAP---EYTEGYEGFYHL--LSLNGDVEQSKA 302 (434)
T ss_dssp EEECCBCEEEEEEEEEECBCCCGGGCTTT-CBCHHHHHHHHHHTSCTTCSG---GGCCTTCCEEEE--EEEEECSSEEEE
T ss_pred ceeecCCCeEEEEEEEEEEecCCCCCccc-chhHHHHHHHHHHhcccccCC---CcceeeeEEEEe--eeEeEecCeEEE
Confidence 47788999999999999999999888987 599999999999999876322 245567888885 479999999999
Q ss_pred EEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 329 EIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 329 ~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
++++|..|.+ +.+++.+.++.+++.+.
T Consensus 303 ~~diR~~~~~--~~~~i~~~i~~~~~~~~ 329 (434)
T 3ife_A 303 YYIIRDFDRK--NFEARKNTIENIVKQMQ 329 (434)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCHH--HHHHHHHHHHHHHHHHH
Confidence 9999999998 78888888888776554
No 8
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.97 E-value=3.3e-29 Score=250.03 Aligned_cols=244 Identities=20% Similarity=0.199 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc-cCcEEEeccCCCceeeeCCCCCCceEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA-VGNIYGEISSSSRGVWIGNEAELASVA 145 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~-~gNvia~~~~~~~~~~~G~~~~~p~Il 145 (362)
+++++++++|++||++ |++|.++++||+++|+++|++++++. .+|+++ +++|++ + |+|+
T Consensus 28 ~~~i~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a--------~~~~~~-~-~~i~ 87 (418)
T 1xmb_A 28 DWMVKIRRKIHENPEL----------GYEELETSKLIRSELELIGIKYRYPVAITGVIG--------YIGTGE-P-PFVA 87 (418)
T ss_dssp HHHHHHHHHHHHSCCC----------TTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEE--------EEESSS-S-CEEE
T ss_pred HHHHHHHHHHHhCCCC----------CCChHHHHHHHHHHHHHcCCeeEeccCCcEEEE--------EEcCCC-C-CEEE
Confidence 7899999999999986 45688999999999999999998875 689999 998753 3 7999
Q ss_pred EEecccCCCCC------------CccccH---HHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCcchHHHHHHHc
Q 048461 146 TGSHIDAIPYS------------GKYDGV---TGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKNISFLDAARSA 208 (362)
Q Consensus 146 l~sHlDTVp~g------------G~~Dg~---~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G~~~~e~~ee~ 208 (362)
|.+||||||.+ |.+.|+ .|+++++++++.|+... +.+++. +..+.||||......+-+.
T Consensus 88 l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~----~~~~~~EEg~~G~~~~~~~ 163 (418)
T 1xmb_A 88 LRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVV----LIFQPAEEGLSGAKKMREE 163 (418)
T ss_dssp EEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEE----EEEECCTTTTCHHHHHHHT
T ss_pred EEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEE----EEEeccccccccHHHHHHc
Confidence 99999999975 333333 78999999999987543 456665 3456787754333444333
Q ss_pred CCCCccccchhhhhccCCceeEEEeecccCcccccCCc-eeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHH
Q 048461 209 GYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGT-SIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAA 287 (362)
Q Consensus 209 G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~-~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa 287 (362)
|.. .++++++.+|++++. +.+. ...+..+++|..+++|+++|+++|+| .|+. |+|||.+++
T Consensus 164 g~~-------------~~~d~~i~~~~~~~~---~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has-~P~~-g~nAi~~~a 225 (418)
T 1xmb_A 164 GAL-------------KNVEAIFGIHLSARI---PFGKAASRAGSFLAGAGVFEAVITGKGGHAA-IPQH-TIDPVVAAS 225 (418)
T ss_dssp TTT-------------TTEEEEEEEEEEEEE---ETTCEEECSEEEECEEEEEEEEEEEC-----------CCHHHHHHH
T ss_pred CCc-------------CCCCEEEEEecCCCC---CCceeEeeeccccccceeEEEEEEecCcccC-CCcc-CCCHHHHHH
Confidence 321 135678888887542 2222 22345678999999999999999998 7986 699999999
Q ss_pred HHHHHHHHhhhhh-CC-CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 288 ELALAVEKHVLES-GS-IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 288 ~li~~L~~l~~~~-~~-~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+++.+|+++..+. ++ ..+++|+|.|++ |++.|+||++|++++|+|..| +.+++.+.++.+++.+.
T Consensus 226 ~~i~~l~~~~~~~~~~~~~~t~~vg~i~g-G~~~NvIP~~a~~~~diR~~~----~~~~i~~~i~~~~~~~a 292 (418)
T 1xmb_A 226 SIVLSLQQLVSRETDPLDSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFT----GFTQLQQRVKEVITKQA 292 (418)
T ss_dssp HHHHHHHTTCBCCSSGGGCEEEEEEEEC---------CCEEEEEEEEEESS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCCcEEEEEEEEe-cCcCCcCCCeEEEEEEEccCc----HHHHHHHHHHHHHHHHH
Confidence 9999998875321 11 257899999997 589999999999999999999 68888888888776543
No 9
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=1.8e-29 Score=246.85 Aligned_cols=236 Identities=13% Similarity=0.087 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEE
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVA 145 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Il 145 (362)
.+++++++++|++||+. |.+|.++++||+++|+++|++++++ .+|+++ +++|+++++|+|+
T Consensus 10 ~~~~~~~~~~l~~~ps~----------s~~e~~~~~~l~~~l~~~g~~~~~~-~~nv~a--------~~~g~~~~~~~i~ 70 (356)
T 3ct9_A 10 TAEAVSLLKSLISIPSI----------SREETQAADFLQNYIEAEGMQTGRK-GNNVWC--------LSPMFDLKKPTIL 70 (356)
T ss_dssp HHHHHHHHHHHHTSCCB----------TTCCHHHHHHHHHHHHHTTCCEEEE-TTEEEE--------ECSSCCTTSCEEE
T ss_pred HHHHHHHHHHHhcCCCC----------CCChHHHHHHHHHHHHHCCCeEEEE-eeeEEE--------EEecCCCCCCeEE
Confidence 57899999999999986 4567889999999999999999888 789999 8877322358999
Q ss_pred EEecccCCCCCCc--------------------cccHHHHHHHHHHHHHhhhcccccccchhhhhcccccCCcchHHHHH
Q 048461 146 TGSHIDAIPYSGK--------------------YDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDGKNISFLDAA 205 (362)
Q Consensus 146 l~sHlDTVp~gG~--------------------~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~~G~~~~e~~ 205 (362)
|.+|+||||.++. .|++.|+++++++++.|+...+.+++. +..+.|||.
T Consensus 71 l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~v~----~~~~~~EE~------- 139 (356)
T 3ct9_A 71 LNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTSQNYNLI----YLASCEEEV------- 139 (356)
T ss_dssp EEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSCCSSEEE----EEEECCGGG-------
T ss_pred EEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCEE----EEEEeCccc-------
Confidence 9999999998641 278889999999999997544666665 334567542
Q ss_pred HHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHH
Q 048461 206 RSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLA 285 (362)
Q Consensus 206 ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~a 285 (362)
.|..+...++... .+.+ +.+|.+ ++. ..++.+++|..+++|+++|+++|++ .| . ++|||.+
T Consensus 140 --~g~~G~~~~~~~~----~~~d--~~i~~e------p~~--~~i~~~~~G~~~~~i~~~G~~~Ha~-~p-~-g~nAi~~ 200 (356)
T 3ct9_A 140 --SGKEGIESVLPGL----PPVS--FAIVGE------PTE--MQPAIAEKGLMVLDVTATGKAGHAA-RD-E-GDNAIYK 200 (356)
T ss_dssp --TCTTTHHHHGGGS----CCCS--EEEECC------SBT--TCCEEEECCCEEEEEEEECBCCBTT-SS-C-CBCTTGG
T ss_pred --CCccCHHHHHhhC----CCCC--EEEEcC------CCC--ceEEEeeeEEEEEEEEEECCCcccC-CC-C-CCCHHHH
Confidence 0333333232221 0122 233433 222 2366789999999999999999998 57 5 6999999
Q ss_pred HHHHHHHHHHhhhhhC-C--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHH
Q 048461 286 AAELALAVEKHVLESG-S--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLA 353 (362)
Q Consensus 286 aa~li~~L~~l~~~~~-~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~ 353 (362)
+++++.+|+++..+.. + ..+++|+|.|++ |++.|+||++|++++++|..|.| +.+++.+.++.++
T Consensus 201 ~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~~iR~~~~~--~~~~~~~~i~~~~ 268 (356)
T 3ct9_A 201 VLNDIAWFRDYRFEKESPLLGPVKMSVTVINA-GTQHNVVPDKCTFVVDIRSNELY--SNEDLFAEIRKHI 268 (356)
T ss_dssp GHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEE-CSSTTBCCSEEEEEEEEECCTTC--CHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhcccccccCCCCcEEeeEEec-CCcCCcCCCceEEEEEEeeCCCC--CHHHHHHHHHHHh
Confidence 9999999998754321 1 357999999997 58999999999999999999999 8888888777654
No 10
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=6.7e-29 Score=246.76 Aligned_cols=247 Identities=17% Similarity=0.165 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccC--cEEEeccCCCceeeeCCCCCCce
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVG--NIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~g--Nvia~~~~~~~~~~~G~~~~~p~ 143 (362)
.+++++++++|++||++ |.+|.++++||+++|+++|+++++++.+ |+++ +++|+++ +|+
T Consensus 31 ~~~~i~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a--------~~~g~~~-~~~ 91 (404)
T 1ysj_A 31 HTRLINMRRDLHEHPEL----------SFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIA--------EIKGRED-GPV 91 (404)
T ss_dssp HHHHHHHHHHHHHSCCC----------TTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEE--------EEECSSC-CCE
T ss_pred HHHHHHHHHHHHhcCCC----------CCChHHHHHHHHHHHHHcCCceEEeccCCceEEE--------EEeCCCC-CCE
Confidence 47899999999999986 4568899999999999999999877766 9999 9987543 589
Q ss_pred EEEEecccCCCCCC------------cc---ccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcchHHHHHH
Q 048461 144 VATGSHIDAIPYSG------------KY---DGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAAR 206 (362)
Q Consensus 144 Ill~sHlDTVp~gG------------~~---Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~e 206 (362)
|+|.||+||||.+. .. +.+.|+++++++++.|++. .+.+++. +..+.|||+......+-
T Consensus 92 i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~----~~~~~~EE~~~G~~~~~ 167 (404)
T 1ysj_A 92 IAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVR----FIFQPAEEIAAGARKVL 167 (404)
T ss_dssp EEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEE----EEEESCTTTTCHHHHHH
T ss_pred EEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEE----EEEecccccchhHHHHH
Confidence 99999999999762 21 2357888999999998753 3556665 34467877522223333
Q ss_pred HcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEe--eecceEEEEEEEeeCCCCCcCCCCCCCcHHH
Q 048461 207 SAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTA--IAAPASIKADFEGTGGHAGAVLMPNRNDAGL 284 (362)
Q Consensus 207 e~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~--~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~ 284 (362)
+.|.. .++++++.+|++++.. .+ ...+..+ .+|..+++|+++|+++||+ .|+. |.||+.
T Consensus 168 ~~g~~-------------~~~d~~i~~h~ep~~~---~g-~v~~~~g~~~~g~~~~~i~v~G~~~Has-~P~~-g~nAi~ 228 (404)
T 1ysj_A 168 EAGVL-------------NGVSAIFGMHNKPDLP---VG-TIGVKEGPLMASVDRFEIVIKGKGGHAS-IPNN-SIDPIA 228 (404)
T ss_dssp HTTTT-------------TTEEEEEEEEEETTSC---TT-EEEECSEEEECCEEEEEEEEECC---------C-CCCHHH
T ss_pred hcCCC-------------cCCCEEEEEecCCCCC---Cc-eEEeccChhhcccceEEEEEEccCcccc-Cccc-CCCHHH
Confidence 33321 1356788889875421 11 1122223 6899999999999999997 7875 699999
Q ss_pred HHHHHHHHHHHhhhhh-CC-CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 285 AAAELALAVEKHVLES-GS-IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 285 aaa~li~~L~~l~~~~-~~-~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
++++++.+|+++..+. .+ ..+++|+|.|++ |++.|+||++|++++|+|..|.| +.+++.+.++.+++.+.
T Consensus 229 ~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~--~~~~i~~~i~~~~~~~~ 300 (404)
T 1ysj_A 229 AAGQIISGLQSVVSRNISSLQNAVVSITRVQA-GTSWNVIPDQAEMEGTVRTFQKE--ARQAVPEHMRRVAEGIA 300 (404)
T ss_dssp HHHHHHHHHC-----------CCEEEEEEEEE-CSCSSSCCSEEEEEEEEECSSHH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEc-CCCCceecCceEEEEEEecCCHH--HHHHHHHHHHHHHHHHH
Confidence 9999999998764332 11 357899999997 68999999999999999999998 78888888888776543
No 11
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.97 E-value=1.9e-29 Score=250.33 Aligned_cols=243 Identities=12% Similarity=0.045 Sum_probs=186.3
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccC---cEEEeccCCCceeeeCCCCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVG---NIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~g---Nvia~~~~~~~~~~~G~~~~ 140 (362)
...+++++++++|+++|+. |++|.++++||+++|+++|++++++..| |++| +++|.. +
T Consensus 13 ~~~~~~~~~~~~l~~~pe~----------s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via--------~~~g~~-~ 73 (394)
T 3ram_A 13 TNKYSYIEISHRIHERPEL----------GNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIA--------TYDSGL-D 73 (394)
T ss_dssp HTHHHHHHHHHHHHHSCCC----------TTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEE--------EEECSS-S
T ss_pred HHHHHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEE--------EEeCCC-C
Confidence 3568899999999999985 5789999999999999999999988665 8999 998754 3
Q ss_pred CceEEEEecccCCCCCC---ccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcc--hHHH-HHHHcCCCC
Q 048461 141 LASVATGSHIDAIPYSG---KYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNI--SFLD-AARSAGYAK 212 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG---~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~--~~~e-~~ee~G~~~ 212 (362)
+|+|+|+|||||||.-+ ..|++. ++++.+++.|+.. .+.+++. +..++|||+. .... .+.+.|.
T Consensus 74 g~~i~l~ah~D~vpg~~ha~G~d~~~--a~~l~aa~~L~~~~~~~~g~v~----~~f~~~EE~~~~~Ga~~~~~~~g~-- 145 (394)
T 3ram_A 74 GPAIGFLAEYDALPGLGHACGHNIIG--TASVLGAIGLKQVIDQIGGKVV----VLGCPAEEGGENGSAKASYVKAGV-- 145 (394)
T ss_dssp SCEEEEEECCCCCTTTSSTTCHHHHH--HHHHHHHHHHHTTHHHHCSEEE----EEECCCTTCCTTCCHHHHHHHHTG--
T ss_pred CCEEEEEEecccCCCcceECCccHHH--HHHHHHHHHHHHhHhhCCceEE----EEEECCccCCCCCchHHHHHHcCC--
Confidence 58999999999999311 125543 3456666777642 3567776 3456887642 1222 3333332
Q ss_pred ccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHH
Q 048461 213 EHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALA 292 (362)
Q Consensus 213 ~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~ 292 (362)
++ ++++++.+|++++.. +..+++|..+|+|+|+|+++|+|+.|+. |+|||.++++++..
T Consensus 146 ---------~~--~~d~~~~~h~~~~~~---------~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~-g~nAi~~a~~~i~~ 204 (394)
T 3ram_A 146 ---------ID--QIDIALMIHPGNETY---------KTIDTLAVDVLDVKFYGKSAHASENADE-ALNALDAMISYFNG 204 (394)
T ss_dssp ---------GG--GCSEEECCEEESSBB---------CCCCBCEEEEEEEEEECBCCBHHHHGGG-CBCHHHHHHHHHHH
T ss_pred ---------cc--cCCEEEEECCccccC---------CCccccceeEEEEEEEccccccCCCCcC-CCCHHHHHHHHHHH
Confidence 21 467888889876531 2235799999999999999999868987 69999999999999
Q ss_pred HHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHHH
Q 048461 293 VEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLAK 358 (362)
Q Consensus 293 L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~~ 358 (362)
|+++..... ..++++++.+++ |++.|+||++|++++++|..|.| +.+++.+.++.+++.+..
T Consensus 205 l~~l~~~~~-~~~~~~~~~i~g-G~~~NvIP~~a~~~~~iR~~~~~--~~~~i~~~i~~~~~~~a~ 266 (394)
T 3ram_A 205 VAQLRQHIK-KDQRVHGVILDG-GKAANIIPDYTHARFYTRAMTRK--ELDILTEKVNQIARGAAI 266 (394)
T ss_dssp HHHHGGGSC-TTCEEEEEEEEB-CSCTTBCCSEEEEEEEEEESSHH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCC-CCCeeEEEEEEC-CCCCceeCCeEEEEEEEeeCCHH--HHHHHHHHHHHHHHHHHH
Confidence 998865432 356788898986 68999999999999999999998 788888888888776543
No 12
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=2e-29 Score=249.11 Aligned_cols=243 Identities=17% Similarity=0.142 Sum_probs=182.2
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc-----cC-cEEEeccCCCceeeeCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA-----VG-NIYGEISSSSRGVWIGN 137 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~-----~g-Nvia~~~~~~~~~~~G~ 137 (362)
.+.++++++|++|++|+|++.. ...+.++++||+++|+++|++++++. .+ |+++ +++|+
T Consensus 16 ~~~~~~~~~l~~lv~i~s~s~~-------~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a--------~~~g~ 80 (393)
T 1cg2_A 16 DEQPAVIKTLEKLVNIETGTGD-------AEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVG--------KIKGR 80 (393)
T ss_dssp HHHHHHHHHHHHHHTSCCBTTC-------HHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEE--------EEECS
T ss_pred hhHHHHHHHHHHHhcCCCCCCC-------HHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEE--------EECCC
Confidence 3568899999999999986421 12457899999999999999998765 34 8999 88864
Q ss_pred CCCCceEEEEecccCCCCCC------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCC
Q 048461 138 EAELASVATGSHIDAIPYSG------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 138 ~~~~p~Ill~sHlDTVp~gG------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~ 197 (362)
+ .|+|+|.+|+||||+.| ..|+++|++++|++++.|+... +.+++. +..+.|||
T Consensus 81 ~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~----~~~~~~EE 154 (393)
T 1cg2_A 81 G--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTIT----VLFNTDEE 154 (393)
T ss_dssp S--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE----EEEESCGG
T ss_pred C--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEE----EEEEcccc
Confidence 3 38999999999999743 2489999999999999997543 345555 33456754
Q ss_pred cchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCC-ceeeEEEeeecceEEEEEEEeeCCCCCcCCC
Q 048461 198 NISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEG-TSIGIVTAIAAPASIKADFEGTGGHAGAVLM 276 (362)
Q Consensus 198 G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~-~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~ 276 (362)
.|..+...++..... +.+..+-+ +++. ....++.+++|..+++|+++|+++|||+.|+
T Consensus 155 ----------~g~~G~~~~~~~~~~---~~d~~i~~--------e~~~~~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~ 213 (393)
T 1cg2_A 155 ----------KGSFGSRDLIQEEAK---LADYVLSF--------EPTSAGDEKLSLGTSGIAYVQVNITGKASHAGAAPE 213 (393)
T ss_dssp ----------GTTTTTHHHHHHHHH---HCSEEEEC--------CCEETTSCEEESEECEEEEEEEEEECBCEETTSCGG
T ss_pred ----------cCCccHHHHHHHHhh---cCCEEEEe--------CCCCCCCCcEEEeeeeeEEEEEEEEeeecccCCCcc
Confidence 222222222222111 12233222 2221 1235778899999999999999999987898
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 277 PNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 277 ~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
. ++||+.++++++.+|+.+..+. ..+++|+|.|++ |.+.|+||++|++++++|..|.+ +.+++.+.++.+++
T Consensus 214 ~-g~nAi~~~~~~i~~l~~~~~~~--~~~~~~v~~i~g-G~~~NvIP~~a~~~~~iR~~~~~--~~~~i~~~i~~~~~ 285 (393)
T 1cg2_A 214 L-GVNALVEASDLVLRTMNIDDKA--KNLRFNWTIAKA-GNVSNIIPASATLNADVRYARNE--DFDAAMKTLEERAQ 285 (393)
T ss_dssp G-SBCHHHHHHHHHHHHGGGCBTT--TTEEEEEEEEEE-CSSTTEECSEEEEEEEEEESSHH--HHHHHHHHHHHHHT
T ss_pred c-CcCHHHHHHHHHHHHHhhhCcc--cCceEEEEEEeC-CCCCCEECcccEEEEEEeeCChh--hHHHHHHHHHHHHh
Confidence 6 5999999999999998876443 468999999997 57999999999999999999998 67777777766553
No 13
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.96 E-value=1.1e-28 Score=248.43 Aligned_cols=247 Identities=17% Similarity=0.162 Sum_probs=188.2
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc--------------------------
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED-------------------------- 117 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d-------------------------- 117 (362)
...++++++.++|.++|+. +++|.++++||+++|+++|++++++
T Consensus 11 ~~~~~~~~~~~~lh~~Pe~----------~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
T 3io1_A 11 QLAPSMTQWRRDFHLHAES----------GWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR 80 (445)
T ss_dssp TTHHHHHHHHHHHHHTCCC----------TTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCC----------CCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence 4568999999999999885 6789999999999999999999875
Q ss_pred --------------ccCcEEEeccCCCceeeeCCCCCCceEEEEecccCCCCCC--cc-------------ccH------
Q 048461 118 --------------AVGNIYGEISSSSRGVWIGNEAELASVATGSHIDAIPYSG--KY-------------DGV------ 162 (362)
Q Consensus 118 --------------~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~gG--~~-------------Dg~------ 162 (362)
...|++| +++|+. ++|+|+|++||||||++. .| ||+
T Consensus 81 ~~g~~~~~~~~~~~~~~~vva--------~~~~~~-~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGh 151 (445)
T 3io1_A 81 EQGAPERWLPAFEGGFAGVVA--------TLDTGR-PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGH 151 (445)
T ss_dssp TTTCCTTTGGGGTTTCCCEEE--------EEECSS-CCCEEEEEEECCCCCC-------------------------CTT
T ss_pred cccccccccccccCCCCEEEE--------EEeCCC-CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCc
Confidence 2368999 998764 358999999999999742 11 222
Q ss_pred -HHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCc
Q 048461 163 -TGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGP 239 (362)
Q Consensus 163 -~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~ 239 (362)
.+++++|.+++.|+.. .+.|++. +..+.||||......+-+.|.. +++++++.+|+..+
T Consensus 152 d~~~a~~l~aa~~L~~~~~~~~g~v~----l~f~p~EE~~~Ga~~~i~~g~~-------------~~~d~~~~~h~~~~- 213 (445)
T 3io1_A 152 DGHTAIGLGLAHVLKQYAAQLNGVIK----LIFQPAEEGTRGARAMVAAGVV-------------DDVDYFTAIHIGTG- 213 (445)
T ss_dssp CTHHHHHHHHHHHHHHTGGGCCSEEE----EEEESCTTTTCHHHHHHHTTTT-------------TTCSEEEEEEEEEE-
T ss_pred hHHHHHHHHHHHHHHhCcCcCCceEE----EEEeccccccchHHHHHHcCCc-------------cccceeEEEeccCC-
Confidence 2477778888888743 4677776 4457888865445555555532 14677888886432
Q ss_pred ccccCCceeeEEEeeec---ceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecC
Q 048461 240 ILEKEGTSIGIVTAIAA---PASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHP 316 (362)
Q Consensus 240 vle~~~~~~giv~~~kG---~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg 316 (362)
++ .+ .++.+.+| ..+++|+++|+++|+|+.|+. ++|||.++++++.+|+++.+... +.+++|+|.|++ |
T Consensus 214 -~~-~g---~i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P~~-g~nAi~~aa~~i~~l~~l~~~~~-~~~~~~vg~i~g-G 285 (445)
T 3io1_A 214 -VP-AG---TVVCGGDNFMATTKFDVQFSGVAAHAGGKPED-GRNALLAAAQAALGLHAIPPHSA-GASRVNVGVMQA-G 285 (445)
T ss_dssp -EE-TT---BEESCCCCBCEEEEEEEEEECCCSSTTCCGGG-CCCHHHHHHHHHHHHHTCCCBTT-BCEEEEEEEEEE-C
T ss_pred -CC-CC---eEEEecCCeeEEEEEEEEEEeecCCCCCCCcC-CcCHHHHHHHHHHHHHHHHhhcC-CCeEEEEEEEec-C
Confidence 11 11 23333444 479999999999999889997 59999999999999998754332 468899999997 5
Q ss_pred CccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 317 GAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 317 ~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
++.|+||++|++++++|..|.| +.+++.+.++.+++.+.
T Consensus 286 ~~~NvIP~~a~~~~~iR~~~~~--~~~~i~~~i~~~~~~~a 324 (445)
T 3io1_A 286 TGRNVVPSSALLKVETRGESEA--INQYVFERAQHVVAGAA 324 (445)
T ss_dssp SCTTSCCCEEEEEEEEEESSHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCceeCCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998 78888888888777654
No 14
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.96 E-value=1.1e-28 Score=242.01 Aligned_cols=241 Identities=13% Similarity=0.044 Sum_probs=181.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCC-CCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGN-EAELAS 143 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~-~~~~p~ 143 (362)
+.+++++++++|++||+.++. ..+|.++++||+++|+++|++++.+. +|+++ +++|+ ++++|+
T Consensus 4 ~~~~~~~~l~~l~~ips~s~~-------~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~~~--------~~~~~~~~~~~~ 67 (364)
T 2rb7_A 4 SMQHIVELTSDLIRFPSMHSR-------PEQISRCAGFIMDWCAQNGIHAERMD-HDGIP--------SVMVLPEKGRAG 67 (364)
T ss_dssp HHHHHHHHHHHHHTSCCCTTC-------HHHHHHHHHHHHHHHHHTTCCCEEEE-ETTEE--------EEEECSBTTEEE
T ss_pred cHHHHHHHHHHHHcCCCCCCC-------cchHHHHHHHHHHHHHHcCCeEEEec-CCCce--------EEEEEcCCCCCe
Confidence 467899999999999987421 16889999999999999999988765 79999 87652 223589
Q ss_pred EEEEecccCCCC----------CC------ccccHHHHHHHHHHHHHhhhcc--c---ccc--cchhhhhcccccCCcch
Q 048461 144 VATGSHIDAIPY----------SG------KYDGVTGVLGALEAINVLKSRL--L---AGI--ESLAKDLTSIVDGKNIS 200 (362)
Q Consensus 144 Ill~sHlDTVp~----------gG------~~Dg~~Gv~aal~a~~~L~s~~--~---~g~--~~~~e~l~~~~D~~G~~ 200 (362)
|+|.+|+||||. +| ..|+|.|+++++++++.|+... + .++ +. +..+.|||..
T Consensus 68 i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~----~~~~~~EE~~- 142 (364)
T 2rb7_A 68 LLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALG----LLITGDEEIG- 142 (364)
T ss_dssp EEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEE----EEEESCGGGT-
T ss_pred EEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEE----EEEEeccccC-
Confidence 999999999986 33 4699999999999999987532 3 345 54 3345776521
Q ss_pred HHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCC
Q 048461 201 FLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRN 280 (362)
Q Consensus 201 ~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~ 280 (362)
|..+...++.. . +.-+.+|++.+ ++.. ++++++|..+++|+++|+++|++ .|+. ++
T Consensus 143 --------g~~G~~~~~~~-----~--~~d~~i~~d~~-----~p~~--i~~~~~G~~~~~i~v~G~~~Ha~-~P~~-g~ 198 (364)
T 2rb7_A 143 --------GMNGAAKALPL-----I--RADYVVALDGG-----NPQQ--VITKEKGIIDIKLTCTGKAAHGA-RPWM-GV 198 (364)
T ss_dssp --------STTTHHHHGGG-----C--EEEEEEECSSS-----BTTE--EEEEECEEEEEEEEEECBCEETT-SGGG-SB
T ss_pred --------chhhHHHHHhc-----C--CCCEEEEccCC-----cccc--eEEEeeeEEEEEEEEEeecccCC-CCCC-Cc
Confidence 22222222221 1 22245565432 2222 88899999999999999999998 5886 69
Q ss_pred cHHHHHHHHHHHHHHhhhhhCC--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHH
Q 048461 281 DAGLAAAELALAVEKHVLESGS--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLA 353 (362)
Q Consensus 281 nAi~aaa~li~~L~~l~~~~~~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~ 353 (362)
||+.++++++.+|+++...... ..+++|+|.|++ |++.|+||++|++++|+|..|.+ +.+++.+.++.++
T Consensus 199 nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~~iR~~~~~--~~~~i~~~i~~~~ 270 (364)
T 2rb7_A 199 NAVDLLMEDYTRLKTLFAEENEDHWHRTVNLGRIRA-GESTNKVPDVAEGWFNIRVTEHD--DPGALIDKIRKTV 270 (364)
T ss_dssp CHHHHHHHHHHHHHTTSCCCCTTCCSCEEEEEEEEE-CSCTTEECSEEEEEEEEEECTTS--CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhhccchhhcCCCceEEEEEEec-CCcCcccCcceEEEEEEeeCCCC--CHHHHHHHHHHHh
Confidence 9999999999999887321001 357999999997 58999999999999999999999 7888888777653
No 15
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.96 E-value=2.4e-28 Score=241.46 Aligned_cols=243 Identities=16% Similarity=0.118 Sum_probs=178.5
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE---cccCcEEEeccCCCceeeeCCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE---DAVGNIYGEISSSSRGVWIGNEA 139 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~---d~~gNvia~~~~~~~~~~~G~~~ 139 (362)
.++.+++++++++|++||+. |.+|.++++||+++|+++|+++++ +..+|+++ ++ |+
T Consensus 2 ~l~~~~~~~~l~~lv~~ps~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a--------~~-g~-- 60 (393)
T 1vgy_A 2 SLTETQSLELAKELISRPSV----------TPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWL--------RR-GT-- 60 (393)
T ss_dssp --CCSHHHHHHHHHHTSCCB----------TTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEE--------EE-CS--
T ss_pred CCchHHHHHHHHHHhcCCCC----------CCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEE--------EE-CC--
Confidence 35678899999999999986 345677899999999999999987 55689999 88 64
Q ss_pred CCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhc--ccccccchhhhhccccc
Q 048461 140 ELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVD 195 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D 195 (362)
++|+|+|.|||||||.++ ..|+|.|+++++++++.|+.. .+.+++. +..+.|
T Consensus 61 ~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~----~~~~~~ 136 (393)
T 1vgy_A 61 KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIA----LLITSD 136 (393)
T ss_dssp SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE----EEEESC
T ss_pred CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEE----EEEEec
Confidence 358999999999999864 127888999999999988643 2456665 345678
Q ss_pred CCcc--hH----HHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCC
Q 048461 196 GKNI--SF----LDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGG 269 (362)
Q Consensus 196 ~~G~--~~----~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~a 269 (362)
||+. .. .+.+...+. .++..+-.| .+... ..+ ..+..+++|..+++|+++|+++
T Consensus 137 EE~~~~~Ga~~~~~~~~~~~~---------------~~d~~i~~e--~~~~~-~~g--~~i~~g~~G~~~~~i~v~G~~~ 196 (393)
T 1vgy_A 137 EEGDALDGTTKVVDVLKARDE---------------LIDYCIVGE--PTAVD-KLG--DMIKNGRRGSLSGNLTVKGKQG 196 (393)
T ss_dssp SSSCCTTSHHHHHHHHHHTTC---------------CEEEEEECC--CCBSS-STT--SEEECEECEEEEEEEEEECBCE
T ss_pred cccCCcCCHHHHHHHHHhcCc---------------CCCEEEEeC--CCCcc-cCC--ceeEEeeeeEEEEEEEEEccCc
Confidence 7631 11 122222221 223322221 11100 001 1256678999999999999999
Q ss_pred CCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhC---CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHH
Q 048461 270 HAGAVLMPNRNDAGLAAAELALAVEKHVLESG---SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDME 346 (362)
Q Consensus 270 HAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~---~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~ 346 (362)
|++ .|+. |+||+.++++++.+|+.+..+.. ..++++|||.|++|+++.|+||++|++++|+|..|.+ +.+++.
T Consensus 197 Ha~-~P~~-g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~gG~~~~NviP~~a~~~~diR~~~~~--~~~~i~ 272 (393)
T 1vgy_A 197 HIA-YPHL-AINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTES--TEAGLK 272 (393)
T ss_dssp ETT-CGGG-CBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEEECCSCTTEECSEEEEEEEEEECTTS--CHHHHH
T ss_pred ccC-CCcc-CCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEcCCCCCCcccCCeEEEEEEEecCCCC--CHHHHH
Confidence 998 6875 69999999999999988642211 1356899999997534899999999999999999999 889998
Q ss_pred HHHHHHHH
Q 048461 347 NGVKVLAL 354 (362)
Q Consensus 347 ~gi~~l~~ 354 (362)
+.++.+++
T Consensus 273 ~~i~~~~~ 280 (393)
T 1vgy_A 273 QRVHAILD 280 (393)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887765
No 16
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.96 E-value=1.1e-28 Score=241.43 Aligned_cols=238 Identities=15% Similarity=0.046 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccC-cEEEeccCCCceeeeCCCCCCce
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVG-NIYGEISSSSRGVWIGNEAELAS 143 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~g-Nvia~~~~~~~~~~~G~~~~~p~ 143 (362)
.+++++++++|++||++ |++|.++++||+++|+++|++ ++++..+ |+++ +++++ ++|+
T Consensus 12 ~~~~~~~~~~l~~~ps~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a--------~~~~~--~~~~ 71 (369)
T 3tx8_A 12 LGDPIVLTQRLVDIPSP----------SGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLA--------RTNRG--LASR 71 (369)
T ss_dssp CSCHHHHHHHHHSSCCB----------TTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEE--------ECCCC--CSCE
T ss_pred HHHHHHHHHHHhcCCCC----------CccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEE--------EecCC--CCCe
Confidence 46789999999999986 457889999999999999872 4444444 7999 88764 3589
Q ss_pred EEEEecccCCCCC---------------CccccHHHHHHHHHHHHHhhhc-ccccccchhhhhcccccCCcc---hHHHH
Q 048461 144 VATGSHIDAIPYS---------------GKYDGVTGVLGALEAINVLKSR-LLAGIESLAKDLTSIVDGKNI---SFLDA 204 (362)
Q Consensus 144 Ill~sHlDTVp~g---------------G~~Dg~~Gv~aal~a~~~L~s~-~~~g~~~~~e~l~~~~D~~G~---~~~e~ 204 (362)
|+|.+||||||++ |..|+|.|+++++++++.|+.. .+.+++. +..+.|||.. .....
T Consensus 72 v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~~~~~~~v~----~~~~~~EE~g~~~~G~~~ 147 (369)
T 3tx8_A 72 VMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATSTELKHDLT----LIAYECEEVADHLNGLGH 147 (369)
T ss_dssp EEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSCTTCCSEEE----EEEECCCSSCTTSCHHHH
T ss_pred EEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhhcCCCccEE----EEEEeccccCcccccHHH
Confidence 9999999999983 3459999999999999999743 3456665 3446777632 22333
Q ss_pred HHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcCCCCCCCcHHH
Q 048461 205 ARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAVLMPNRNDAGL 284 (362)
Q Consensus 205 ~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~ 284 (362)
+.+.+.. .++..+.+|.++ + ...++++++|..+++|+++|+++|++ .|+. |+||+.
T Consensus 148 ~~~~~~~--------------~~~~~~~i~~ep------~--~~~i~~~~~G~~~~~i~v~G~~~Ha~-~p~~-g~nAi~ 203 (369)
T 3tx8_A 148 IRDEHPE--------------WLAADLALLGEP------T--GGWIEAGCQGNLRIKVTAHGVRAHSA-RSWL-GDNAMH 203 (369)
T ss_dssp HHHHCGG--------------GGCCSEEEECCC------C--TTCEEESBCEEEEEEEEEECBCCBTT-SGGG-SBCTGG
T ss_pred HHHhccc--------------ccCCCEEEEeCC------C--CCceeeecceEEEEEEEEeeeccccC-CCCc-CcCHHH
Confidence 3222210 011223344432 2 24578889999999999999999998 6875 699999
Q ss_pred HHHHHHHHHHHhhhhhC---C--CCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 285 AAAELALAVEKHVLESG---S--IDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 285 aaa~li~~L~~l~~~~~---~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
++++++.+|+++..+.. + ..+++|+|.|++ |++.|+||++|++++|+|..|.+ +.+++.+.++.+++
T Consensus 204 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~--~~~~v~~~i~~~~~ 275 (369)
T 3tx8_A 204 KLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCES-GVANNVIPDLAWMNLNFRFAPNR--DLNEAIEHVVETLE 275 (369)
T ss_dssp GGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEE-CSBTTBCCSEEEEEEEEEECTTS--CHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcccccccCCcccCceEEEEEEEC-CCCCccccCcEEEEEEEecCCCC--CHHHHHHHHHHHHH
Confidence 99999999998754321 1 146899999997 68999999999999999999999 88998888877654
No 17
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.96 E-value=2.5e-27 Score=231.33 Aligned_cols=240 Identities=13% Similarity=0.071 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEE---cccCcEEEeccCCCceeeeCCCCCCc
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRE---DAVGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~---d~~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
.+++++++++|+++|+. |.+|.++++||+++|+++|++++. |..+|++| ++ |+ ++|
T Consensus 2 ~~~~~~~~~~L~~~ps~----------s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a--------~~-g~--~~~ 60 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSI----------SPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWA--------KH-GT--SEP 60 (377)
T ss_dssp HHHHHHHHHHHHTSCCB----------TTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEE--------EE-ES--SSC
T ss_pred chHHHHHHHHHhcCCCC----------CCChhhHHHHHHHHHHHCCCceEEeecCCCceEEE--------Ee-CC--CCC
Confidence 46899999999999986 345778999999999999999884 56689999 87 54 358
Q ss_pred eEEEEecccCCCCCCc----------------------cccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCCc
Q 048461 143 SVATGSHIDAIPYSGK----------------------YDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGKN 198 (362)
Q Consensus 143 ~Ill~sHlDTVp~gG~----------------------~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~G 198 (362)
+|+|.|||||||.++. .|++.|+++++.+++.|... .+.+++. +..+.|||+
T Consensus 61 ~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~----~~~~~~EE~ 136 (377)
T 3isz_A 61 VIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIA----LLITSDEEA 136 (377)
T ss_dssp EEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE----EEEESCSSS
T ss_pred EEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEE----EEEEccccc
Confidence 9999999999997531 27888999999988887643 2456555 334577763
Q ss_pred c------hHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCC
Q 048461 199 I------SFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAG 272 (362)
Q Consensus 199 ~------~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg 272 (362)
. .+.+.+...+. .++..+-.|. ... .. ....++.+.+|..+++|+++|+++|++
T Consensus 137 ~~~~G~~~~~~~~~~~~~---------------~~d~~~~~e~--~~~-~~--~g~~i~~g~~g~~~~~i~~~G~~~Ha~ 196 (377)
T 3isz_A 137 TAKDGTIHVVETLMARDE---------------KITYCMVGEP--SSA-KN--LGDVVKNGRRGSITGNLYIQGIQGHVA 196 (377)
T ss_dssp CCSSSHHHHHHHHHHTTC---------------CCCEEEECCC--CBS-SS--TTSEEEEEECEEEEEEEEEECC-----
T ss_pred CccccHHHHHHHHHhcCC---------------CCCEEEEcCC--CCc-cc--CCceEEEEcceEEEEEEEEEccccccC
Confidence 1 11222222121 2233322221 110 00 111267789999999999999999997
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhhhhh-C--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHH
Q 048461 273 AVLMPNRNDAGLAAAELALAVEKHVLES-G--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGV 349 (362)
Q Consensus 273 ~~P~~~g~nAi~aaa~li~~L~~l~~~~-~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi 349 (362)
.|+. ++||+.++++++.+|+++..+. . ...+++|+|.|++|.++.|+||++|++++|+|..|.+ +.+++.+.+
T Consensus 197 -~p~~-g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i~gg~~~~nvip~~~~~~~diR~~~~~--~~~~i~~~i 272 (377)
T 3isz_A 197 -YPHL-AENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTGSNNVIPAELYIQFNLRYCTEV--TDEIIKQKV 272 (377)
T ss_dssp ---CG-GGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEEEECCSCSSCCCSEEEEEEEEEECTTS--CHHHHHHHH
T ss_pred -CCcc-CcCHHHHHHHHHHHHHhccccccccccCCceeEEEEEECCCCCCcccCCceEEEEEEecCCCC--CHHHHHHHH
Confidence 5875 6999999999999998864321 1 1467999999997544899999999999999999998 889888887
Q ss_pred HHHHH
Q 048461 350 KVLAL 354 (362)
Q Consensus 350 ~~l~~ 354 (362)
+.+++
T Consensus 273 ~~~~~ 277 (377)
T 3isz_A 273 AEMLE 277 (377)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 18
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.95 E-value=3e-27 Score=235.30 Aligned_cols=244 Identities=15% Similarity=0.114 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcccCcEEEeccCCCceeeeCCCC-CCceE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDAVGNIYGEISSSSRGVWIGNEA-ELASV 144 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~~gNvia~~~~~~~~~~~G~~~-~~p~I 144 (362)
++++++|++|++|+|++.++.+|..++.+|.++++||+++|+++|++ +++|..+|+++ +++|+++ ++|+|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia--------~~~g~~~~~~~~i 73 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSEKGTLMA--------TLPANVEGDIPAI 73 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTTCCEEE--------EECCSSCSCCCCE
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEECCCceEEE--------EECCCCCCCCCce
Confidence 46899999999999998888889888999999999999999999998 99998899999 9877532 35899
Q ss_pred EEEecccCCCCCC--------------c-------------------------------------cccHHHHHHHHHHHH
Q 048461 145 ATGSHIDAIPYSG--------------K-------------------------------------YDGVTGVLGALEAIN 173 (362)
Q Consensus 145 ll~sHlDTVp~gG--------------~-------------------------------------~Dg~~Gv~aal~a~~ 173 (362)
+|.|||||||.++ . .|+|.|++++|++++
T Consensus 74 ~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~ 153 (417)
T 1fno_A 74 GFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALA 153 (417)
T ss_dssp EEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHH
Confidence 9999999998643 1 455689999999999
Q ss_pred Hhhhcc-cccccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEE
Q 048461 174 VLKSRL-LAGIESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVT 252 (362)
Q Consensus 174 ~L~s~~-~~g~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~ 252 (362)
.|+... +.+++. +..+.||| .| .+...++.+. + ..+. .++++.++ . ..++.
T Consensus 154 ~l~~~~~~~~~v~----~~~~~~EE----------~g-~Ga~~~~~~~-~---~~d~--~i~~d~~~------~-g~i~~ 205 (417)
T 1fno_A 154 VLKGNPIPHGDIK----VAFTPDEE----------VG-KGAKHFDVEA-F---GAQW--AYTVDGGG------V-GELEF 205 (417)
T ss_dssp HHHSSSCCCCCEE----EEEESCGG----------GT-CTTTTCCHHH-H---CCSE--EEECCCCS------T-TBEEC
T ss_pred HHHhCCCCCCcEE----EEEEeccc----------cC-CChhhhchhh-c---CCCE--EEEeCCCC------c-CeeEE
Confidence 997533 455655 34456754 33 3332233221 1 1122 23332222 1 23677
Q ss_pred eeecceEEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCC--CCeEEEEEEEEecCCccceecCeEEEEE
Q 048461 253 AIAAPASIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGS--IDTVGTVGILELHPGAINSIPIKSQLEI 330 (362)
Q Consensus 253 ~~kG~~~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~--~~~t~tvG~I~~gg~a~NvVP~~a~l~i 330 (362)
+++|..+++|+++|+++|+|..|+. ++|||.++++++.+|+++..+..+ ...++|+|.|++ | |++|++++
T Consensus 206 ~~~g~~~~~i~~~G~~~Hs~~~p~~-g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~g-G------p~~a~~~~ 277 (417)
T 1fno_A 206 ENFNAASVNIKIVGNNVHPGTAKGV-MVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKG-T------VDRAEMHY 277 (417)
T ss_dssp CBCEEEEEEEEEECBCCCGGGCTTT-CBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEE-C------SSEEEEEE
T ss_pred ecCCceeEEEEEEeeccCCCCCccc-cCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEee-c------cCeEEEEE
Confidence 8899999999999999999877986 699999999999999876433211 235899999996 3 99999999
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
|+|..|.+ +.+++.+.++.+++.+
T Consensus 278 d~R~~~~~--~~~~~~~~i~~~~~~~ 301 (417)
T 1fno_A 278 IIRDFDRK--QFEARKRKMMEIAKKV 301 (417)
T ss_dssp EEEESSHH--HHHHHHHHHHHHHHHH
T ss_pred EEeCCCHH--HHHHHHHHHHHHHHHH
Confidence 99999998 7888888888777654
No 19
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.95 E-value=3.2e-27 Score=231.60 Aligned_cols=235 Identities=18% Similarity=0.158 Sum_probs=169.4
Q ss_pred ccccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc----CcEEEeccCCCceeeeC
Q 048461 61 SLSVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV----GNIYGEISSSSRGVWIG 136 (362)
Q Consensus 61 ~~~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~----gNvia~~~~~~~~~~~G 136 (362)
.+..+.+++++++++|++||+.+++|. +.+|.++++||+++|+ |++++++.. +|+++ . +|
T Consensus 3 ~~~~~~~~~~~~l~~l~~ips~s~~~~-----~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a--------~-~g 66 (369)
T 2f7v_A 3 HMTDLLASTLEHLETLVSFDTRNPPRA-----IAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA--------V-RG 66 (369)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCBTTTTC-----CCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE--------E-ES
T ss_pred hhhhhhHHHHHHHHHHhCCCCcCCCCC-----CccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE--------E-cC
Confidence 344557899999999999999764442 3478899999999999 999988765 58887 2 34
Q ss_pred CCCCCceEEEEecccCCCCCC-c-------------------cccHHHHHHHHHHHHHhhhcccccccchhhhhcccccC
Q 048461 137 NEAELASVATGSHIDAIPYSG-K-------------------YDGVTGVLGALEAINVLKSRLLAGIESLAKDLTSIVDG 196 (362)
Q Consensus 137 ~~~~~p~Ill~sHlDTVp~gG-~-------------------~Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~~D~ 196 (362)
+ |+|+|.+|+||||.++ + .|++.|++++|.+++. +.+++. +..+.||
T Consensus 67 ~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-----~~~~v~----~~~~~~E 133 (369)
T 2f7v_A 67 T----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-----GDGDAA----FLFSSDE 133 (369)
T ss_dssp C----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-----CCCCEE----EEEESCT
T ss_pred C----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-----CCCCEE----EEEEeCc
Confidence 2 6899999999999874 2 2567899998888765 456665 3445776
Q ss_pred Cc--chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeCCCCCcC
Q 048461 197 KN--ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTGGHAGAV 274 (362)
Q Consensus 197 ~G--~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~aHAg~~ 274 (362)
|. ......+-+.+.+ .+..+ ++|++ ...++.+++|..+++|+++|+++|+| .
T Consensus 134 E~~g~~G~~~~~~~~~~---------------~d~~i--------~~e~~--~~~i~~~~~g~~~~~i~v~G~~~Ha~-~ 187 (369)
T 2f7v_A 134 EANDPRCIAAFLARGLP---------------YDAVL--------VAEPT--MSEAVLAHRGISSVLMRFAGRAGHAS-G 187 (369)
T ss_dssp TSSSCCHHHHHHTTCCC---------------CSEEE--------ECCCS--TTCBBCCBCCEEEEEEEEECCCC-----
T ss_pred ccCCCcCHHHHHhcCCC---------------CCEEE--------ECCCC--CCcceeecCceEEEEEEEeeeCcccC-C
Confidence 53 2223333222221 12221 22332 23466789999999999999999998 7
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhhhCC---CC---eEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHH
Q 048461 275 LMPNRNDAGLAAAELALAVEKHVLESGS---ID---TVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENG 348 (362)
Q Consensus 275 P~~~g~nAi~aaa~li~~L~~l~~~~~~---~~---~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~g 348 (362)
|+..|+||+.++++++.+|+++..+... .+ +++|+|.|++ |.+.|+||++|++++|+|..|.+ +.+++.+.
T Consensus 188 p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~diR~~~~~--~~~~~~~~ 264 (369)
T 2f7v_A 188 KQDPAASALHQAMRWGGKALDHVESLAHARFGGLTGLRFNIGRVDG-GIKANMIAPAAELRFGFRPLPSM--DVDGLLAT 264 (369)
T ss_dssp --CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEESCEEEEEEEEE-CSSTTSCCSEEEEEEEEECCTTC--CHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHHhhhhhhcccccCcccCCceEEEEeec-CCCCCcCCCceEEEEEEeeCCCC--CHHHHHHH
Confidence 8723699999999999999987654310 11 6899999997 58999999999999999999999 78888888
Q ss_pred HHHHH
Q 048461 349 VKVLA 353 (362)
Q Consensus 349 i~~l~ 353 (362)
++.++
T Consensus 265 i~~~~ 269 (369)
T 2f7v_A 265 FAGFA 269 (369)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 77654
No 20
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.94 E-value=8.8e-26 Score=228.93 Aligned_cols=252 Identities=12% Similarity=0.032 Sum_probs=180.7
Q ss_pred CHH-HHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc---cCcEEEeccCCCceeeeCCCCC
Q 048461 65 DTE-TLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA---VGNIYGEISSSSRGVWIGNEAE 140 (362)
Q Consensus 65 ~~~-~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~---~gNvia~~~~~~~~~~~G~~~~ 140 (362)
+.+ ++++++++|++||+.+.. ..+|.++++||+++|+++|+++++++ .+|+++ +++|++++
T Consensus 41 ~~~~~~~~~l~~l~~ips~s~~-------e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a--------~~~g~~~~ 105 (481)
T 2pok_A 41 HVAQHYFEVLRTLISKKSVFAQ-------QVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMA--------HFKSSRPD 105 (481)
T ss_dssp HHHHHHHHHHHHHHHSCCCGGG-------CTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEE--------EECCSSTT
T ss_pred hhhHHHHHHHHHHHcCCCcCCC-------CHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEE--------EecCCCCC
Confidence 456 899999999999986421 13468999999999999999998864 479999 99865234
Q ss_pred CceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccC
Q 048461 141 LASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDG 196 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~ 196 (362)
+|+|+|.||+||||.++ ..|++.|+++++++++.|+.. .+.+++. +..+.||
T Consensus 106 ~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~----~~~~~~E 181 (481)
T 2pok_A 106 AKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNIS----FIMEGAE 181 (481)
T ss_dssp CCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEE----EEEESCG
T ss_pred CCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEE----EEEeccc
Confidence 68999999999999864 136688999999999999853 3556655 3345776
Q ss_pred CcchHHHHHHHcCCCCccccchhh--hhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEEEEeeC--CCCC
Q 048461 197 KNISFLDAARSAGYAKEHNDLSSV--FLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKADFEGTG--GHAG 272 (362)
Q Consensus 197 ~G~~~~e~~ee~G~~~~~~~i~~~--~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~v~G~~--aHAg 272 (362)
|. |..+...++.+. .++ +.+..+.. ++.... .....++++++|..+++|+++|++ +|+
T Consensus 182 E~----------g~~g~~~~~~~~~~~~~--~~d~~i~~---~~~~~~--~~~~~i~~~~~G~~~~~i~v~G~~g~~Hs- 243 (481)
T 2pok_A 182 ES----------ASTDLDKYLEKHADKLR--GADLLVWE---QGTKNA--LEQLEISGGNKGIVTFDAKVKSADVDIHS- 243 (481)
T ss_dssp GG----------TTTTHHHHHHHHHHHHT--TCSEEECS---CCBBCT--TSCEEEECCBCEEEEEEEEEECSSSCEEG-
T ss_pred cc----------CchhHHHHHHHhHhhcc--CCCEEEEC---CCCccC--CCCeeEEEecceeEEEEEEEecCCCCccc-
Confidence 52 211111111110 010 12222211 111111 113467789999999999999999 899
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhh-----------------------hhhC----------------------------
Q 048461 273 AVLMPNRNDAGLAAAELALAVEKHV-----------------------LESG---------------------------- 301 (362)
Q Consensus 273 ~~P~~~g~nAi~aaa~li~~L~~l~-----------------------~~~~---------------------------- 301 (362)
+.|+. +.|||..+++++.+|+++. .+..
T Consensus 244 s~p~~-g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 322 (481)
T 2pok_A 244 SYGGV-VESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKR 322 (481)
T ss_dssp GGTTT-BCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHH
T ss_pred cCCCC-CCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHH
Confidence 68885 6999999999999987642 1000
Q ss_pred -CCCeEEEEEEEEecC---CccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHH
Q 048461 302 -SIDTVGTVGILELHP---GAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTL 356 (362)
Q Consensus 302 -~~~~t~tvG~I~~gg---~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l 356 (362)
...+++|+|.|++|. ++.|+||++|++++++|..|.+ +.+++.+.++.+++.+
T Consensus 323 ~~~~~t~~vg~i~gG~~~~~~~NvIP~~a~~~~diR~~~~~--~~~~v~~~i~~~~~~~ 379 (481)
T 2pok_A 323 FFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGL--EPHDVLEKIRKQLDKN 379 (481)
T ss_dssp HHHSCEEEEEEEEEECCSSSCCCEECSEEEEEEEEEECTTC--CHHHHHHHHHHHHHHT
T ss_pred HhhcCeEeEEeeecCCCCCCCCeeccCeeEEEEEEEeCCCC--CHHHHHHHHHHHHHhh
Confidence 013699999999752 2789999999999999999999 8899998888877643
No 21
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.94 E-value=1.9e-25 Score=225.90 Aligned_cols=257 Identities=15% Similarity=0.012 Sum_probs=184.5
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc--------------CcEEEeccC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV--------------GNIYGEISS 128 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~--------------gNvia~~~~ 128 (362)
..+.+++++++++|++||+.+.. ..++.+|.++++||+++|+++|++++++.. +|+++
T Consensus 16 ~~~~~~~~~~l~~l~~~ps~s~~----e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a---- 87 (479)
T 2zog_A 16 DENQDRYVKKLAEWVAIQSVSAW----PEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLG---- 87 (479)
T ss_dssp HHTHHHHHHHHHHHHHSCCBTTC----GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEE----
T ss_pred HHhHHHHHHHHHHHhcCCCccCC----cccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEE----
Confidence 34678999999999999987531 112346789999999999999999988764 79999
Q ss_pred CCceeeeCCCCCCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--ccccc
Q 048461 129 SSRGVWIGNEAELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIE 184 (362)
Q Consensus 129 ~~~~~~~G~~~~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~ 184 (362)
++++. +++|+|+|.||+||||.++ ..|+|.|++++|++++.|+... +.+++
T Consensus 88 ----~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v 162 (479)
T 2zog_A 88 ----KLGSD-PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNL 162 (479)
T ss_dssp ----EECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEE
T ss_pred ----EecCC-CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 88654 2468999999999999842 1477899999999999997543 44555
Q ss_pred chhhhhcccccCCc-chHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEEE
Q 048461 185 SLAKDLTSIVDGKN-ISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKAD 263 (362)
Q Consensus 185 ~~~e~l~~~~D~~G-~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I~ 263 (362)
. +..+.|||. ......+-+.+... .+ .+.+..+-. +++. ++ .....++++++|..+++|+
T Consensus 163 ~----~~~~~~EE~g~~Ga~~~~~~~~~~--------~~--~~~d~~i~~--e~~~-~~--~~~~~i~~~~~G~~~~~i~ 223 (479)
T 2zog_A 163 R----FCLEGMEESGSEGLDELIFAQKDK--------FF--KDVDYVCIS--DNYW-LG--KNKPCITYGLRGICYFFIE 223 (479)
T ss_dssp E----EEEESCGGGTCTTHHHHHHHTTTT--------TT--TTCCEEEEC--CCBC-SS--SSSCEEEEEECEEEEEEEE
T ss_pred E----EEEecccccCCccHHHHHHhhhhh--------hc--ccCCEEEEe--CCCc-CC--CCCeEEEEecceEEEEEEE
Confidence 4 334577652 11122222211000 00 022333222 2221 11 1245688899999999999
Q ss_pred EEeeC--CCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhh-------------------------------------CC--
Q 048461 264 FEGTG--GHAGAVLMPNRNDAGLAAAELALAVEKHVLES-------------------------------------GS-- 302 (362)
Q Consensus 264 v~G~~--aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~-------------------------------------~~-- 302 (362)
++|++ +|||. | |.||+.++++++..|+++..+. ..
T Consensus 224 v~G~~~~~Hs~~-~---g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 299 (479)
T 2zog_A 224 VECSDKDLHSGV-Y---GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAET 299 (479)
T ss_dssp EECCSSCEEHHH-H---TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSS
T ss_pred EEeCCCCCccCC-C---CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcc
Confidence 99999 99984 3 5899999999999987654320 00
Q ss_pred --------------CCeEEEEEEEEec---CCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 303 --------------IDTVGTVGILELH---PGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 303 --------------~~~t~tvG~I~~g---g~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
..+++|||.|+++ +++.|+||++|++++++|..|.+ +.+++.+.++.+++.+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~v~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~--~~~~v~~~i~~~~~~~~ 369 (479)
T 2zog_A 300 LLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDM--IPEVVSEQVSSYLSKKF 369 (479)
T ss_dssp CSCSSHHHHHHHHHTSCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTC--CHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHhhcCCCeEEeeeecCCcCCCCccccCCceEEEEEEEeCCCC--CHHHHHHHHHHHHHHhh
Confidence 1368999999964 26999999999999999999999 88999998888877654
No 22
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.93 E-value=1.5e-25 Score=227.72 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=156.8
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCC--CCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNE--AEL 141 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~--~~~ 141 (362)
++.+++++++++|++||+. |.+|.++++||+++|+++|+++++|..+|+++ +++|+. +++
T Consensus 8 ~~~~~~~~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~nv~a--------~~~g~~g~~~~ 69 (487)
T 2qyv_A 8 LQPKLLWQWFDQICAIPHP----------SYKEEQLAQFIINWAKTKGFFAERDEVGNVLI--------RKPATVGMENR 69 (487)
T ss_dssp SSSHHHHHHHHHHHHSCCB----------TTCCHHHHHHHHHHHHHTTCEEEECTTCCEEE--------EECCCTTCTTB
T ss_pred cCHHHHHHHHHHHHcCCCC----------CCcHHHHHHHHHHHHHHcCCEEEEcCCCcEEE--------EeCCCCCCCCC
Confidence 5678999999999999985 45788999999999999999999998899999 887641 245
Q ss_pred ceEEEEecccCCCCCCc-------------------------c---ccHHHHHHHHHHHHHhhhcccccccchhhhhccc
Q 048461 142 ASVATGSHIDAIPYSGK-------------------------Y---DGVTGVLGALEAINVLKSRLLAGIESLAKDLTSI 193 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG~-------------------------~---Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~~ 193 (362)
|+|+|.|||||||.++. . |++.|++++|++++.. ..+.+++. +..+
T Consensus 70 ~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~~--~~~~~~v~----~~~~ 143 (487)
T 2qyv_A 70 KPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLESN--DIAHPELE----VLLT 143 (487)
T ss_dssp CCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHCS--SSCCSSEE----EEEE
T ss_pred CeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHhC--CCCCCCEE----EEEE
Confidence 89999999999998631 1 7778999988887632 23445555 3446
Q ss_pred ccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecccCc---cccc--CC------ceeeEEEeeecceEEEE
Q 048461 194 VDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIEQGP---ILEK--EG------TSIGIVTAIAAPASIKA 262 (362)
Q Consensus 194 ~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie~g~---vle~--~~------~~~giv~~~kG~~~~~I 262 (362)
.|||. |..+...++... + ..+..+ +.+.+. +... .+ .+.+++.+++| .+++|
T Consensus 144 ~~EE~----------g~~Ga~~~~~~~-~---~~d~~~--~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i 206 (487)
T 2qyv_A 144 MTEER----------GMEGAIGLRPNW-L---RSEILI--NTDTEENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQV 206 (487)
T ss_dssp SCTTT----------TCHHHHTCCSSC-C---CCSEEE--ECCCCCTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEE
T ss_pred ecccc----------CCHHHHHHHHhc-c---CCCEEE--EEccCCCCeEEEeccCCcceeeeccccccccCCC-eEEEE
Confidence 77763 111111111110 1 112222 222111 0000 00 01223345667 89999
Q ss_pred EEEe-eCCCCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEee
Q 048461 263 DFEG-TGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGY 332 (362)
Q Consensus 263 ~v~G-~~aHAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~ 332 (362)
+++| +++|||..|+.++.||+.++++++.+|+.+. +..++|+|.|++ |++.|+||++|++++++
T Consensus 207 ~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~-----~~~~~~v~~i~g-G~~~NvIP~~a~~~~~~ 271 (487)
T 2qyv_A 207 VLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQ-----PHFDFTLANIRG-GSIRNAIPRESVATLVF 271 (487)
T ss_dssp EEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHHC-----TTCCEEEEEEEE-ESCTTBCCCCEEEEEEE
T ss_pred EEEccCCccCCcccccCCCCHHHHHHHHHHHHhhcc-----CCCcEEEEEEeC-CCcCcccCCceEEEEEe
Confidence 9999 8999986667656899999999999998762 246899999997 48999999999999998
No 23
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=220.77 Aligned_cols=257 Identities=13% Similarity=0.049 Sum_probs=180.9
Q ss_pred ccCHHHHHHHHHHHHcCCCC--CCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc-------C-------cEEEec
Q 048461 63 SVDTETLQKQIDELSTFSDT--PAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV-------G-------NIYGEI 126 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~--~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~-------g-------Nvia~~ 126 (362)
..+.+++++++++|++||++ +... .+..+|.++++||+++|+++|++++++.. | |+++
T Consensus 21 ~~~~~~~i~~l~~lv~ips~~~s~~~----~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a-- 94 (485)
T 3dlj_A 21 DLHQDEFVQTLKEWVAIESDSVQPVP----RFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILA-- 94 (485)
T ss_dssp HHTHHHHHHHHHHHHTSCCBSSSCCH----HHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEE--
T ss_pred HHhHHHHHHHHHHHhcCCCccCCCCc----cccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEE--
Confidence 44678999999999999997 3210 01134789999999999999999887643 2 6899
Q ss_pred cCCCceeeeCCCCCCceEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhc--cccc
Q 048461 127 SSSSRGVWIGNEAELASVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSR--LLAG 182 (362)
Q Consensus 127 ~~~~~~~~~G~~~~~p~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~--~~~g 182 (362)
++++. +++|+|+|.+||||||.+ |..|+|+|++++|.+++.|+.. .+.+
T Consensus 95 ------~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 167 (485)
T 3dlj_A 95 ------ELGSD-PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPV 167 (485)
T ss_dssp ------EECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred ------EECCC-CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 88653 346899999999999974 1237889999999999999753 3455
Q ss_pred ccchhhhhcccccCCcchHHHHHHHcCCCCccccchhhhhc-cCCceeEEEeecccCcccccCCceeeEEEeeecceEEE
Q 048461 183 IESLAKDLTSIVDGKNISFLDAARSAGYAKEHNDLSSVFLK-KGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIK 261 (362)
Q Consensus 183 ~~~~~e~l~~~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~-~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~ 261 (362)
++. +..+.|||. |..+...++.+.... -.+++..+..|.. .. ......++.+++|..+++
T Consensus 168 ~v~----~~~~~~EE~----------g~~g~~~~~~~~~~~~~~~~d~~~~~~~~---~~--~~~~~~~~~g~~g~~~~~ 228 (485)
T 3dlj_A 168 NIK----FIIEGMEEA----------GSVALEELVEKEKDRFFSGVDYIVISDNL---WI--SQRKPAITYGTRGNSYFM 228 (485)
T ss_dssp EEE----EEEESCGGG----------TTTTHHHHHHHHTTTTSTTCCEEEECCCB---CC--C--CCEEEEEECEEEEEE
T ss_pred cEE----EEEEccccc----------CCccHHHHHHhhhhhcccCCCEEEEcCCC---cc--CCCCeeEEEeccceEEEE
Confidence 655 334567652 222221222211000 0134445444421 00 012234677899999999
Q ss_pred EEEEeeCC--CCCcCCCCCCCcHHHHHHHHHHHHHHhhhhhC------------C-------------------------
Q 048461 262 ADFEGTGG--HAGAVLMPNRNDAGLAAAELALAVEKHVLESG------------S------------------------- 302 (362)
Q Consensus 262 I~v~G~~a--HAg~~P~~~g~nAi~aaa~li~~L~~l~~~~~------------~------------------------- 302 (362)
|+|+|+++ |+|. . +.||+.+++.++..|..+..+.. +
T Consensus 229 i~v~G~~~~~H~~~---~-g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~ 304 (485)
T 3dlj_A 229 VEVKCRDQDFHSGT---F-GGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRV 304 (485)
T ss_dssp EEEESCSSCEETTT---S-TTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTC
T ss_pred EEEEECCCCCcCCC---C-CccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCC
Confidence 99999999 9984 2 47888888888888777643210 0
Q ss_pred ----------------CCeEEEEEEEEec---CCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 303 ----------------IDTVGTVGILELH---PGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 303 ----------------~~~t~tvG~I~~g---g~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
..+++|||.|++| +++.||||++|++++++|+.+.+ ..+++.+.++.+++.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~--~~~~v~~~i~~~~~~~a 376 (485)
T 3dlj_A 305 EKFLFDTKEEILMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHM--NVSAVEKQVTRHLEDVF 376 (485)
T ss_dssp SCCSCSSHHHHHHHHHTSCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTC--CHHHHHHHHHHHHHHHH
T ss_pred CcccccchHHHHHHHhcCCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCC--CHHHHHHHHHHHHHHhc
Confidence 1478999999963 17999999999999999999999 88999999998887764
No 24
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.93 E-value=2.1e-25 Score=227.42 Aligned_cols=242 Identities=15% Similarity=0.202 Sum_probs=168.4
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCC--CC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNE--AE 140 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~--~~ 140 (362)
.++++++++++++|++||++ |.+|.++++||+++|+++|+++++|..+|+++ +++|+. .+
T Consensus 10 ~~~~~~~~~~~~~L~~ips~----------s~~e~~~~~~l~~~l~~~G~~v~~~~~~nv~a--------~~~g~~g~~~ 71 (490)
T 3mru_A 10 TLSPAPLWQFFDKICSIPHP----------SKHEEALAQYIVTWATEQGFDVRRDPTGNVFI--------KKPATPGMEN 71 (490)
T ss_dssp GSSSHHHHHHHHHHHHSCCB----------TTCCTTHHHHHHHHHHHTTCEEEECTTCCEEE--------EECCCTTCTT
T ss_pred ccCHHHHHHHHHHHhCCCCC----------CCCHHHHHHHHHHHHHHcCCEEEEcCCCeEEE--------EEcCCCCCCC
Confidence 46889999999999999985 45688999999999999999999999999999 988642 24
Q ss_pred CceEEEEecccCCCCCC-------------------------cc---ccHHHHHHHHHHHHHhhhcccccccchhhhhcc
Q 048461 141 LASVATGSHIDAIPYSG-------------------------KY---DGVTGVLGALEAINVLKSRLLAGIESLAKDLTS 192 (362)
Q Consensus 141 ~p~Ill~sHlDTVp~gG-------------------------~~---Dg~~Gv~aal~a~~~L~s~~~~g~~~~~e~l~~ 192 (362)
+|+|+|.||+||||.++ .. |++.|+++++.+++. .....+++. +..
T Consensus 72 ~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~~--~~~~~~~v~----~~~ 145 (490)
T 3mru_A 72 KKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLAS--KEIKHGPIE----VLL 145 (490)
T ss_dssp CCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHHC--SSCCCCSEE----EEE
T ss_pred CCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHHh--CCCCCCCEE----EEE
Confidence 68999999999999852 11 777888888776532 123456665 344
Q ss_pred cccCCcchHHHHHHHcCCCCccccchhhhhccCCceeEEEeecc-cCcccc--cCCcee------eEEEeeecceEEEEE
Q 048461 193 IVDGKNISFLDAARSAGYAKEHNDLSSVFLKKGSYFAFVELHIE-QGPILE--KEGTSI------GIVTAIAAPASIKAD 263 (362)
Q Consensus 193 ~~D~~G~~~~e~~ee~G~~~~~~~i~~~~~~~~~i~a~~elhie-~g~vle--~~~~~~------giv~~~kG~~~~~I~ 263 (362)
+.||| .|..+...++.. .+ ..+..+-++.+ .|.+.. ..+.+. ....+++|..+++|+
T Consensus 146 ~~~EE----------~g~~Ga~~~~~~-~~---~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~ 211 (490)
T 3mru_A 146 TIDEE----------AGMTGAFGLEAG-WL---KGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLT 211 (490)
T ss_dssp ESCSS----------STTGGGGTCCSS-SC---CSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEE
T ss_pred Ecccc----------cccHhHHHhhhc-cc---CCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEE
Confidence 67765 233333222221 01 11222222211 111100 000111 113457899999999
Q ss_pred EEe-eCCCCCcCCCCCCC-cHHHHHHHHHHHHHHhhhhhCCCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCC
Q 048461 264 FEG-TGGHAGAVLMPNRN-DAGLAAAELALAVEKHVLESGSIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYAS 341 (362)
Q Consensus 264 v~G-~~aHAg~~P~~~g~-nAi~aaa~li~~L~~l~~~~~~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~ 341 (362)
++| +++|+|..|+.+ + |||..+++++.+|++ .+++++|.|++ |.+.|+||++|++++++|...
T Consensus 212 v~G~~~gHs~~~p~~g-~~nai~~~~~~l~~l~~--------~~~~~v~~i~g-G~~~NvIP~~a~~~~~iR~~~----- 276 (490)
T 3mru_A 212 LKGLKGGHSGCDIHTG-RGNANKLIGRFLAGHAQ--------ELDLRLVEFRG-GSLRNAIPREAFVTVALPAEN----- 276 (490)
T ss_dssp EECCCCEETTTSSSSC-CCCHHHHHHHHHHHHTT--------TTTCEEEEEEE-CSCTTEECCCEEEEEEEEGGG-----
T ss_pred EECCCCcccccccccC-CcCHHHHHHHHHHHHHh--------cCcEEEEEEEC-CCCCcccCCccEEEEEECccc-----
Confidence 999 999998778874 6 999999999998875 13589999997 589999999999999999544
Q ss_pred HHHHHHHHHHHHHHHH
Q 048461 342 CEDMENGVKVLALTLA 357 (362)
Q Consensus 342 ~ed~~~gi~~l~~~l~ 357 (362)
.+++.+-++.+.+.++
T Consensus 277 ~~~~~~~~~~~~~~~~ 292 (490)
T 3mru_A 277 QDKLAELFNYYTELLK 292 (490)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3455555555554443
No 25
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.93 E-value=1.6e-24 Score=219.49 Aligned_cols=255 Identities=14% Similarity=-0.007 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe---EEEcc----cCcEEEeccCCCceeeeCCCC
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS---VREDA----VGNIYGEISSSSRGVWIGNEA 139 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~---v~~d~----~gNvia~~~~~~~~~~~G~~~ 139 (362)
++++++|++|++|||.++..-.......+|.++++|++++|+++|++ +++.+ ..|++| +++|.
T Consensus 18 ~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a--------~~~g~-- 87 (472)
T 3pfe_A 18 EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFM--------EIPGQ-- 87 (472)
T ss_dssp HTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEE--------EECCS--
T ss_pred HHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEE--------EEcCC--
Confidence 67999999999999975320000000124889999999999999984 55432 358999 88773
Q ss_pred CCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhccc-ccccchhhhhcccccC
Q 048461 140 ELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRLL-AGIESLAKDLTSIVDG 196 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~~-~g~~~~~e~l~~~~D~ 196 (362)
++|+|+|.+||||||+++ ..|+|+++++.|.+++.|+.... ..++. +..+.||
T Consensus 88 ~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~v~----~~~~~~E 163 (472)
T 3pfe_A 88 IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYPRCI----LIIEACE 163 (472)
T ss_dssp EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCEEEE----EEEESCG
T ss_pred CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCCcEE----EEEEeCC
Confidence 358999999999999742 12677899999999999875332 12444 3345675
Q ss_pred CcchHHHHHHHcCCCCccccchhh--hhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEE--EEEEeeCCCCC
Q 048461 197 KNISFLDAARSAGYAKEHNDLSSV--FLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIK--ADFEGTGGHAG 272 (362)
Q Consensus 197 ~G~~~~e~~ee~G~~~~~~~i~~~--~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~--I~v~G~~aHAg 272 (362)
| .|..+...++.+. .+ .+++..+-+|.. .. ......+..+.+|..+++ |+++|+++|+|
T Consensus 164 E----------~g~~g~~~~~~~~~~~~--~~~d~~~~~~~~---~~--~~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~ 226 (472)
T 3pfe_A 164 E----------SGSYDLPFYIELLKERI--GKPSLVICLDSG---AG--NYEQLWMTTSLRGNLVGKLTVELINEGVHSG 226 (472)
T ss_dssp G----------GTSTTHHHHHHHHHHHH--CCCSEEEEECCB---CS--CSSSCEEEEEECEEEEEEEEEESCSSCBCHH
T ss_pred C----------CCChhHHHHHHHhHhhc--cCCCEEEEeCCC---cC--CCCCeeEEEeeeEEEEEEEEEEeCCCCcccC
Confidence 4 2222222222221 11 134455555421 11 112346888999999887 45589999997
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhhh----------------h--------------------------hC-CC------
Q 048461 273 AVLMPNRNDAGLAAAELALAVEKHVL----------------E--------------------------SG-SI------ 303 (362)
Q Consensus 273 ~~P~~~g~nAi~aaa~li~~L~~l~~----------------~--------------------------~~-~~------ 303 (362)
.|.....|||..+++++.+|+++.. + .. .+
T Consensus 227 -~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (472)
T 3pfe_A 227 -SASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILN 305 (472)
T ss_dssp -HHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHH
Confidence 4653225999999999999988620 0 00 00
Q ss_pred ---CeEEEEEEEEec---CCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 304 ---DTVGTVGILELH---PGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 304 ---~~t~tvG~I~~g---g~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
.+|+|||.|++| |++.||||++|++++++|..|++ +.+++.+.++.+++.
T Consensus 306 ~~~~~tl~i~~i~gG~~~g~a~NvIP~~a~~~~diR~~~~~--~~~~i~~~i~~~~~~ 361 (472)
T 3pfe_A 306 RTWRPALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLV--DPEAASVAMEKALTQ 361 (472)
T ss_dssp HHTSCEEEEEEEESCCCTTTCCSCBCSEEEEEEEEEECTTC--CHHHHHHHHHHHHHS
T ss_pred hhcCCcEEEeeeecCcCCCCCCCEeCCccEEEEEeecCCCC--CHHHHHHHHHHHHHh
Confidence 478999999974 36999999999999999999999 889999888887764
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.89 E-value=6.6e-22 Score=199.46 Aligned_cols=264 Identities=12% Similarity=0.016 Sum_probs=171.8
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCcc--ccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCC
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSV--TRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv--~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
.+.+++++++++|++||+.+.... +|..++.++.++++||+++|+++|++++.....++++ .+ |+ ++
T Consensus 11 ~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~--------~~-g~--~~ 79 (470)
T 1lfw_A 11 AKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFANYAGRV--------NF-GA--GD 79 (470)
T ss_dssp TTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEETTTEEEE--------EE-CC--CS
T ss_pred HhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEecCeEEEE--------Ee-CC--CC
Confidence 457899999999999999865443 5666788899999999999999999987643223555 66 53 25
Q ss_pred ceEEEEecccCCCCCCc---------------------cccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccccCCc
Q 048461 142 ASVATGSHIDAIPYSGK---------------------YDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIVDGKN 198 (362)
Q Consensus 142 p~Ill~sHlDTVp~gG~---------------------~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~D~~G 198 (362)
|+|+|.|||||||.++. .|+|.|++++|++++.|+... +.+++. +..+.|||+
T Consensus 80 ~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~----~i~~~~EE~ 155 (470)
T 1lfw_A 80 KRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKID----FVLGTNEET 155 (470)
T ss_dssp SEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEE----EEEESCTTT
T ss_pred CeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEE----EEEecCccc
Confidence 89999999999997641 366789999999999987533 456665 345688874
Q ss_pred -chHHHHHHHcCCCCccccchhh----hhccCCceeEEEeecccC----cc---cccCCceeeE-------EE-------
Q 048461 199 -ISFLDAARSAGYAKEHNDLSSV----FLKKGSYFAFVELHIEQG----PI---LEKEGTSIGI-------VT------- 252 (362)
Q Consensus 199 -~~~~e~~ee~G~~~~~~~i~~~----~~~~~~i~a~~elhie~g----~v---le~~~~~~gi-------v~------- 252 (362)
......+.+.+..++....... .+.... ..++++|+++. .+ ....+...++ +.
T Consensus 156 g~~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g-~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~ 234 (470)
T 1lfw_A 156 NWVGIDYYLKHEPTPDIVFSPDAEYPIINGEQG-IFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEA 234 (470)
T ss_dssp TCHHHHHHHHHSCCCSEEEESSEESSEEEEECE-EEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHH
T ss_pred CCccHHHHHHhCcCCcEEEEeCCCceEEEeccc-eEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHH
Confidence 2223333333322111000000 000000 12345555331 10 0001111111 11
Q ss_pred ------------eeecce-----EEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHH------Hhh---hhh------
Q 048461 253 ------------AIAAPA-----SIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVE------KHV---LES------ 300 (362)
Q Consensus 253 ------------~~kG~~-----~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~------~l~---~~~------ 300 (362)
+++|.. +++|+++|+++|++ .|+. ++||+.++++++.+|+ ++. .+.
T Consensus 235 ~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~-~P~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 312 (470)
T 1lfw_A 235 VKLAYESFLADKELDGSFEINDESADIVLIGQGAHAS-APQV-GKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFY 312 (470)
T ss_dssp HHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTT-CGGG-SBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTT
T ss_pred HHHHHHHHhhhhccccceeecCCcEEEEEeecccCCC-CCcc-CccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCc
Confidence 235654 99999999999997 6875 6999999999998875 221 110
Q ss_pred ---------CC--CCeEEEEEEEEecCCccceecCe-EEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 301 ---------GS--IDTVGTVGILELHPGAINSIPIK-SQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 301 ---------~~--~~~t~tvG~I~~gg~a~NvVP~~-a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
.. ..+++|+|.|+ .+|++ |++++++|..|.+ +.+++.+.++.+++
T Consensus 313 g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~--~~~~i~~~i~~~~~ 369 (470)
T 1lfw_A 313 GKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGT--DPDTMIKQVLDKFS 369 (470)
T ss_dssp STTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTC--CHHHHHHHHHHHHT
T ss_pred ccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCC--CHHHHHHHHHHHhc
Confidence 00 12466777766 47999 9999999999998 78988888877653
No 27
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.89 E-value=1.4e-21 Score=199.14 Aligned_cols=263 Identities=12% Similarity=0.081 Sum_probs=162.7
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCcc--ccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeee-CCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSV--TRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWI-GNEA 139 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv--~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~-G~~~ 139 (362)
..+.+++++++++|++|||+++..- .-..+...+.++++|++++|+++|++++.. +|+++ +++ |.
T Consensus 30 ~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~--~~~~~--------~~~~g~-- 97 (492)
T 3khx_A 30 QQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDV--DHIAG--------RIEAGK-- 97 (492)
T ss_dssp HTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE--TTTEE--------EEEEEC--
T ss_pred HHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEe--CCEEE--------EEEeCC--
Confidence 3467899999999999999753210 001234577899999999999999988754 68777 554 33
Q ss_pred CCceEEEEecccCCCCCC--------------------ccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCC
Q 048461 140 ELASVATGSHIDAIPYSG--------------------KYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp~gG--------------------~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~ 197 (362)
++|+|+|.||+||||++. ..|+|+|+++++.+++.|+.. .+.+++. +..+.|||
T Consensus 98 ~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~----~~~~~~EE 173 (492)
T 3khx_A 98 GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIH----MIIGTDEE 173 (492)
T ss_dssp SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE----EEEECCTT
T ss_pred CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEE----EEEECCcc
Confidence 358999999999999853 237889999999999999754 2455665 33457765
Q ss_pred c--chHHHHHHHcCCCCccccchhhhh----ccCCceeEEEeecc-----------------cC------------cccc
Q 048461 198 N--ISFLDAARSAGYAKEHNDLSSVFL----KKGSYFAFVELHIE-----------------QG------------PILE 242 (362)
Q Consensus 198 G--~~~~e~~ee~G~~~~~~~i~~~~~----~~~~i~a~~elhie-----------------~g------------~vle 242 (362)
. .-+...+++.. .++......... -..++ ..+++..+ .| .+.+
T Consensus 174 ~g~~g~~~~~~~~~-~~~~~~~~d~~~p~~~g~~G~-~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~e 251 (492)
T 3khx_A 174 SDWKCTDRYFKTEE-MPTLGFAPDAEFPCIHGEKGI-TTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLV 251 (492)
T ss_dssp CCCCTTSHHHHHSC-CCSEEECSSCSSCSCCCBCEE-EEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEE
T ss_pred CCCcCHHHHHHhCc-CCCEEEecCCCccEEEecCcE-EEEEEEEeccccccccccceeEEecccccCCcCCchHheEeec
Confidence 3 11112222211 111000000000 00000 00111110 00 0011
Q ss_pred cCCceeeE---------EEeeecce-----EEEEEEEeeCCCCCcCCCCCCCcHHHHHHHHHHHHH------Hhhh----
Q 048461 243 KEGTSIGI---------VTAIAAPA-----SIKADFEGTGGHAGAVLMPNRNDAGLAAAELALAVE------KHVL---- 298 (362)
Q Consensus 243 ~~~~~~gi---------v~~~kG~~-----~~~I~v~G~~aHAg~~P~~~g~nAi~aaa~li~~L~------~l~~---- 298 (362)
++.. ..+ ..+++|.. |++|+++|+++||+ +|+. |+|||.++++++.+|+ ++..
T Consensus 252 pt~~-~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas-~P~~-G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~ 328 (492)
T 3khx_A 252 KENM-TDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGM-DPSI-GVNAGLYLLKFLASLNLDNNAQAFVAFSNR 328 (492)
T ss_dssp CSCH-HHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC--------BCHHHHHHHHHTTSCBCHHHHHHHHHHHH
T ss_pred ccch-HHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccC-CCcc-CccHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 1100 000 12347888 99999999999997 7985 6999999999999886 2210
Q ss_pred h--------------hC--CCCeEEEEEEEEecCCccceecCeEEEEEeeeCCCCCCCCHHHHHHHHHHHHH
Q 048461 299 E--------------SG--SIDTVGTVGILELHPGAINSIPIKSQLEIGYSHKPEEYASCEDMENGVKVLAL 354 (362)
Q Consensus 299 ~--------------~~--~~~~t~tvG~I~~gg~a~NvVP~~a~l~i~~rh~p~E~~~~ed~~~gi~~l~~ 354 (362)
. .+ ...+++|+|.|+++ . |++|++++|+|+.|.+ +.+++.+.++.+++
T Consensus 329 ~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~~g-~-----P~~a~~~idiR~~~~~--~~~~v~~~i~~~~~ 392 (492)
T 3khx_A 329 YLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYD-N-----ENAGLFGINLRYPEGF--EFEKAMDRFANEIQ 392 (492)
T ss_dssp HTTTCTTSGGGTCC-------CCEEEEEEEEEE-T-----TTCCEEEEEEEECTTC--CHHHHHHHHHHHHG
T ss_pred hhCCCCCccccCCccccCCcCccEEeeeEEEEe-c-----CCEEEEEEEeeCCCCC--CHHHHHHHHHHHHH
Confidence 0 01 13578999999964 2 9999999999999998 88998888887654
No 28
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.69 E-value=1.7e-16 Score=149.38 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc---cCcEEEeccCCCceeeeCCCCCCc
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA---VGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~---~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
.+++++++++|++|||++ .+|.++++||+++|+++|++++.+. .+|+++ ++ |. ++|
T Consensus 5 ~~~~~~~l~~lv~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a--------~~-g~--~~~ 63 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSIS----------PNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWA--------KH-GT--SEP 63 (269)
T ss_dssp HHHHHHHHHHHHTSCCBT----------TCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEE--------EE-CS--SSC
T ss_pred HHHHHHHHHHHhCCCCCC----------CCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEE--------Ee-CC--CCC
Confidence 368999999999999864 3456789999999999999988753 579999 87 54 358
Q ss_pred eEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCC
Q 048461 143 SVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 143 ~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~ 197 (362)
+|+|.||+||||.+ |..|++.|+++++++++.|+.. .+.+++. +..+.|||
T Consensus 64 ~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~----~~~~~~EE 138 (269)
T 4h2k_A 64 VIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIA----LLITSDEE 138 (269)
T ss_dssp EEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE----EEEESCSS
T ss_pred EEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEE----EEEEeccc
Confidence 99999999999975 3358899999999999988643 2345555 33457776
No 29
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.64 E-value=1.2e-15 Score=143.39 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEc---ccCcEEEeccCCCceeeeCCCCCC
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVRED---AVGNIYGEISSSSRGVWIGNEAEL 141 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d---~~gNvia~~~~~~~~~~~G~~~~~ 141 (362)
+.+++++++++|++|||++ .+|.++++||+++|+++|++++.. ..+|+++ ++ |+ ++
T Consensus 4 ~~~~~~~~l~~lv~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a--------~~-g~--~~ 62 (268)
T 3t68_A 4 TDSPVLALAKELISRQSVT----------PADAGCQDLMIERLKALGFEIESMVFEDTTNFWA--------RR-GT--QS 62 (268)
T ss_dssp CCCHHHHHHHHHHTSCCBT----------TCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CE--------EE-CS--SS
T ss_pred cHHHHHHHHHHHhCCCCCC----------CCchHHHHHHHHHHHHCCCeEEEEecCCccEEEE--------Ee-CC--CC
Confidence 3478999999999999864 345668999999999999988654 4469999 87 54 35
Q ss_pred ceEEEEecccCCCCC----------------------CccccHHHHHHHHHHHHHhhhc--ccccccchhhhhcccccCC
Q 048461 142 ASVATGSHIDAIPYS----------------------GKYDGVTGVLGALEAINVLKSR--LLAGIESLAKDLTSIVDGK 197 (362)
Q Consensus 142 p~Ill~sHlDTVp~g----------------------G~~Dg~~Gv~aal~a~~~L~s~--~~~g~~~~~e~l~~~~D~~ 197 (362)
|+|+|.||+||||.+ |..|++.|+++++++++.|+.. .+.+++. +..+.|||
T Consensus 63 ~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~----~~~~~~EE 138 (268)
T 3t68_A 63 PLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIG----FLITSDEE 138 (268)
T ss_dssp CEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE----EEEESCTT
T ss_pred CeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEE----EEEEeCCc
Confidence 899999999999975 3458899999999999988643 2345554 33457776
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.63 E-value=1.5e-15 Score=136.68 Aligned_cols=164 Identities=14% Similarity=0.106 Sum_probs=109.2
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc----cCcEEEeccCCCceeeeCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA----VGNIYGEISSSSRGVWIGNE 138 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~----~gNvia~~~~~~~~~~~G~~ 138 (362)
.++.++++++|++|++|+++++ +.+|.++++|++++|+++|+++++++ ..|+++ +++|++
T Consensus 6 ~~~~~~~~~~l~~lv~i~s~s~--------~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~--------~~~g~~ 69 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRIRTVQP--------KPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVL--------TWPGTN 69 (198)
T ss_dssp -CCCCHHHHHHHHHHTSCCBTT--------SCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEE--------EECCSS
T ss_pred chhHHHHHHHHHHHhcCCCCCC--------CcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEE--------EEccCC
Confidence 4577899999999999998753 23688899999999999999988764 248999 888764
Q ss_pred CCCceEEEEecccCCCCCC----------------------ccccHHHHHHHHHHHHHhhhcc--cccccchhhhhcccc
Q 048461 139 AELASVATGSHIDAIPYSG----------------------KYDGVTGVLGALEAINVLKSRL--LAGIESLAKDLTSIV 194 (362)
Q Consensus 139 ~~~p~Ill~sHlDTVp~gG----------------------~~Dg~~Gv~aal~a~~~L~s~~--~~g~~~~~e~l~~~~ 194 (362)
++.|+|+|.||+||||+++ ..|+|.|+++++++++.|+... +.+++. +..+.
T Consensus 70 ~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~----~~~~~ 145 (198)
T 1q7l_A 70 PTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIH----MTFVP 145 (198)
T ss_dssp TTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEE----EEEES
T ss_pred CCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEE----EEEEc
Confidence 4458999999999999742 2578899999999999997543 345554 33456
Q ss_pred cCCcchHHHHHHHcC-CCCccccchhhhhccCCceeEEEeecccCcccccCCceeeEEEeeecceEEEE
Q 048461 195 DGKNISFLDAARSAG-YAKEHNDLSSVFLKKGSYFAFVELHIEQGPILEKEGTSIGIVTAIAAPASIKA 262 (362)
Q Consensus 195 D~~G~~~~e~~ee~G-~~~~~~~i~~~~~~~~~i~a~~elhie~g~vle~~~~~~giv~~~kG~~~~~I 262 (362)
||| .| ..+...++....+.....+..+ ..| +.|+++ ...++.++||..|++|
T Consensus 146 ~EE----------~g~~~Ga~~~~~~~~~~~~~~~~~i----d~g-~~ept~-~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 146 DEE----------VGGHQGMELFVQRPEFHALRAGFAL----DEG-IANPTD-AFTVFYSERSPWWVRV 198 (198)
T ss_dssp CGG----------GTSTTTHHHHTTSHHHHTTCEEEEE----ECC-CCCSSS-SEEEEECCSSCGGGCC
T ss_pred ccc----------cCccccHHHHHHhHHhccCCcCEEE----ecC-ccCCCC-CceEEEEccEEEEEEC
Confidence 654 22 2232222222111111222222 112 334432 1357889999988764
No 31
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.61 E-value=2.2e-17 Score=154.99 Aligned_cols=67 Identities=16% Similarity=0.255 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEec
Q 048461 70 QKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSH 149 (362)
Q Consensus 70 ~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sH 149 (362)
+++|++|++|||++. .||.++++||+++|+++|+++++|+.||||| +++|+ +|+|+|.||
T Consensus 12 ~elL~~Lv~ipS~sg---------~E~~~v~~~l~~~l~~~G~~v~~D~~GNlia--------~~~g~---~p~lll~~H 71 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSG---------YEHLGIRDIVVDVLKEVADEVKVDKLGNVIA--------HFKGS---SPRIMVAAH 71 (354)
T ss_dssp HHHHHHHHHSCCBTT---------CGGGTHHHHHHHHHHTTSSEEEECTTCCEEE--------EECCS---SSEEEEEEE
T ss_pred HHHHHHHhcCCCCCc---------chHHHHHHHHHHHHHHcCCEEEEeCCCeEEE--------EECCC---CceEEEEec
Confidence 578999999999631 2345789999999999999999999999999 88763 489999999
Q ss_pred ccCCCCC
Q 048461 150 IDAIPYS 156 (362)
Q Consensus 150 lDTVp~g 156 (362)
|||||.+
T Consensus 72 ~Dtvp~~ 78 (354)
T 2wzn_A 72 MDKIGVM 78 (354)
T ss_dssp CCBCEEE
T ss_pred cccCCCc
Confidence 9999964
No 32
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.50 E-value=1.3e-14 Score=140.85 Aligned_cols=64 Identities=19% Similarity=0.303 Sum_probs=55.5
Q ss_pred HHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEeccc
Q 048461 72 QIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSHID 151 (362)
Q Consensus 72 ~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlD 151 (362)
+|++|++|+|+ |++|.++++||+++|+++|+++++|..+|+++ +++|++ +.|.|+|.||||
T Consensus 3 ~l~~L~~~~s~----------sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia--------~~~g~~-~~~~v~l~aH~D 63 (340)
T 2fvg_A 3 YLKELSMMPGV----------SGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIA--------LKRGRD-SSKKLLVSAHMD 63 (340)
T ss_dssp CHHHHHHSCCB----------TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEE--------EECCSE-EEEEEEEEEECC
T ss_pred HHHHHHcCCCC----------CCchHHHHHHHHHHHHhhCCEEEEeCCCcEEE--------EecCCC-CCceEEEEeccC
Confidence 58899999986 34577899999999999999999999999999 887642 247899999999
Q ss_pred CCC
Q 048461 152 AIP 154 (362)
Q Consensus 152 TVp 154 (362)
|||
T Consensus 64 ~v~ 66 (340)
T 2fvg_A 64 EVG 66 (340)
T ss_dssp BCE
T ss_pred cCc
Confidence 998
No 33
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.47 E-value=8.1e-14 Score=132.12 Aligned_cols=105 Identities=17% Similarity=0.302 Sum_probs=91.5
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc-------CcEEEeccCCCceeee
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV-------GNIYGEISSSSRGVWI 135 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~-------gNvia~~~~~~~~~~~ 135 (362)
.++.++++++|++|++|++++ |.+|...+.+|.++++||+++|+++|++++++.. .||++ +++
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s--~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~--------~~~ 72 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANN--GGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIA--------NWP 72 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTT--TTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEE--------ECS
T ss_pred cCCHHHHHHHHHHHHcccccC--CCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEE--------EEe
Confidence 467899999999999999875 3367778889999999999999999999988754 49999 887
Q ss_pred CCCCCCceEEEEecccCCCCC-CccccHHHHHHHHHHHHHhhhc
Q 048461 136 GNEAELASVATGSHIDAIPYS-GKYDGVTGVLGALEAINVLKSR 178 (362)
Q Consensus 136 G~~~~~p~Ill~sHlDTVp~g-G~~Dg~~Gv~aal~a~~~L~s~ 178 (362)
|+++ .+.|++++|+||||.| |..|++.|++++|++++.|+..
T Consensus 73 g~~~-~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~ 115 (284)
T 1tkj_A 73 GGDP-NKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRA 115 (284)
T ss_dssp CSEE-EEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHT
T ss_pred CCCC-CCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhc
Confidence 7532 4789999999999997 8899999999999999999754
No 34
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.40 E-value=1.9e-12 Score=124.81 Aligned_cols=106 Identities=22% Similarity=0.254 Sum_probs=84.4
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc------------CcEEEeccCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV------------GNIYGEISSSS 130 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~------------gNvia~~~~~~ 130 (362)
.++.+++++.|++|++|++. ...|..+.++++||+++|+++|+++++|.. +||+|
T Consensus 23 ~~~~~~~~~~l~~L~~~~~R-------~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia------ 89 (314)
T 3gux_A 23 EFDADSAYQYIQVQADFGPR-------VPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIG------ 89 (314)
T ss_dssp CCCHHHHHHHHHHHHTTCCC-------CTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEE------
T ss_pred CCCHHHHHHHHHHHHccCCc-------CCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEE------
Confidence 57899999999999999753 345789999999999999999999987642 69999
Q ss_pred ceeeeCCCCCCceEEEEecccCCCCC--------------CccccHHHHHHHHHHHHHhhhcccccccc
Q 048461 131 RGVWIGNEAELASVATGSHIDAIPYS--------------GKYDGVTGVLGALEAINVLKSRLLAGIES 185 (362)
Q Consensus 131 ~~~~~G~~~~~p~Ill~sHlDTVp~g--------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~ 185 (362)
+++|+. .+.|++++|+||||.+ |..|++.|++++|++++.|+.......+.
T Consensus 90 --~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~~~~~~i~ 154 (314)
T 3gux_A 90 --AYKPES--KKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKEQPALGID 154 (314)
T ss_dssp --EESTTC--SSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHSCCSSEEE
T ss_pred --EECCCC--CceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhCCCCCcEE
Confidence 998853 4799999999999975 77899999999999999997544444444
No 35
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.37 E-value=3.5e-12 Score=125.22 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEE
Q 048461 66 TETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVA 145 (362)
Q Consensus 66 ~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Il 145 (362)
.++++++|++|++|+|+ |+.|.++++||+++|+++|+++++|..||+++ +++|++ +.|+|+
T Consensus 6 ~~~~~~~l~~L~~~~s~----------sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia--------~~~g~~-~~~~vl 66 (373)
T 1vhe_A 6 LDETLTMLKDLTDAKGI----------PGNEREVRQVMKSYIEPFADEVTTDRLGSLIA--------KKTGAE-NGPKIM 66 (373)
T ss_dssp CCHHHHHHHHHHHSCCC----------TTCCHHHHHHHHHHHGGGCSEEEECTTCCEEE--------EEESST-TSCEEE
T ss_pred HHHHHHHHHHHHcCCCC----------CCchHHHHHHHHHHHHhhCCEEEEcCCCcEEE--------EecCCC-CCceEE
Confidence 35799999999999986 34577899999999999999999999999999 887753 348999
Q ss_pred EEecccCCC
Q 048461 146 TGSHIDAIP 154 (362)
Q Consensus 146 l~sHlDTVp 154 (362)
|.|||||||
T Consensus 67 l~aH~D~v~ 75 (373)
T 1vhe_A 67 IAGHLDEVG 75 (373)
T ss_dssp EEEECCCCE
T ss_pred EEecCCcCC
Confidence 999999998
No 36
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.37 E-value=1.3e-12 Score=124.70 Aligned_cols=101 Identities=23% Similarity=0.325 Sum_probs=82.4
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCC--Ce-EEEccc-------CcEEEeccCCCce
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISG--LS-VREDAV-------GNIYGEISSSSRG 132 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~G--l~-v~~d~~-------gNvia~~~~~~~~ 132 (362)
.++.++++++|++|++|++. .+.|++|.++++||+++|+++| ++ ++++.. +||++
T Consensus 16 ~~~~~~~~~~l~~L~~i~sr-------~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~-------- 80 (299)
T 1rtq_A 16 QVDASQITGTISSLESFTNR-------FYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVM-------- 80 (299)
T ss_dssp GCCHHHHHHHHHHHHTSSCC-------CTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEE--------
T ss_pred hcCHHHHHHHHHHHhCcCCC-------CCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEE--------
Confidence 46789999999999999753 3347888999999999999986 44 555543 79999
Q ss_pred eeeCCCCCCceEEEEecccCCC---------CCCccccHHHHHHHHHHHHHhhhc
Q 048461 133 VWIGNEAELASVATGSHIDAIP---------YSGKYDGVTGVLGALEAINVLKSR 178 (362)
Q Consensus 133 ~~~G~~~~~p~Ill~sHlDTVp---------~gG~~Dg~~Gv~aal~a~~~L~s~ 178 (362)
+++|+++..+.|++.+|+|||| ..|..|++.|+++++++++.|+..
T Consensus 81 ~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~ 135 (299)
T 1rtq_A 81 TITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSEN 135 (299)
T ss_dssp EECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHc
Confidence 9987532247899999999998 246789999999999999999754
No 37
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.37 E-value=4.7e-12 Score=121.75 Aligned_cols=106 Identities=22% Similarity=0.242 Sum_probs=89.0
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc------------cCcEEEeccCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA------------VGNIYGEISSSS 130 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~------------~gNvia~~~~~~ 130 (362)
.++.+++++.|++|++|.. |...|..+.++++||+++|+++|+++++|. .+||+|
T Consensus 21 ~~~~~~~~~~l~~l~~~~~-------R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia------ 87 (309)
T 3tc8_A 21 DFNADSAYAYVANQVAFGP-------RVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIG------ 87 (309)
T ss_dssp CCCHHHHHHHHHHHHHTCC-------CCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEE------
T ss_pred ccCHHHHHHHHHHHHccCC-------CCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEE------
Confidence 5789999999999999875 344588999999999999999999998764 369999
Q ss_pred ceeeeCCCCCCceEEEEecccCCCCC--------------CccccHHHHHHHHHHHHHhhhcccccccc
Q 048461 131 RGVWIGNEAELASVATGSHIDAIPYS--------------GKYDGVTGVLGALEAINVLKSRLLAGIES 185 (362)
Q Consensus 131 ~~~~~G~~~~~p~Ill~sHlDTVp~g--------------G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~ 185 (362)
+++|+. .+.|++++|+||||.+ |..|+..|++++|++++.|+.......+.
T Consensus 88 --~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~~~~~~i~ 152 (309)
T 3tc8_A 88 --SFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQKAPGIGID 152 (309)
T ss_dssp --EESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHSCCSSEEE
T ss_pred --EECCCC--CceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhCCCCCcEE
Confidence 998853 4799999999999976 77899999999999999997544444444
No 38
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.36 E-value=1.9e-12 Score=124.91 Aligned_cols=64 Identities=14% Similarity=0.127 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEe
Q 048461 69 LQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGS 148 (362)
Q Consensus 69 l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~s 148 (362)
++++|++|++|+|+ |+.|.++++||+++|+++|+ +++|..+|+++ +++|. .|+|+|.|
T Consensus 4 ~~~~l~~l~~~~s~----------sg~e~~~~~~l~~~l~~~g~-~~~d~~gnlia--------~~~~~---~~~i~l~a 61 (332)
T 2wyr_A 4 MIEKLKKFTQIPGI----------SGYEERIREEIIREIKDFAD-YKVDAIGNLIV--------ELGEG---EERILFMA 61 (332)
T ss_dssp HHHHHHHHHTSCCB----------TTCCHHHHHHHHHHHTTTCC-CEECTTCCEEE--------EEESS---SEEEEEEE
T ss_pred HHHHHHHHHcCCCC----------CCcHHHHHHHHHHHHhhcCc-EEEcCCCeEEE--------EecCC---CceEEEEe
Confidence 78999999999986 34577899999999999999 98999999999 88762 47999999
Q ss_pred cccCCC
Q 048461 149 HIDAIP 154 (362)
Q Consensus 149 HlDTVp 154 (362)
|+|||+
T Consensus 62 H~D~v~ 67 (332)
T 2wyr_A 62 HMDEIG 67 (332)
T ss_dssp ECCBCE
T ss_pred ccCccc
Confidence 999994
No 39
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.34 E-value=3.5e-12 Score=124.24 Aligned_cols=65 Identities=15% Similarity=0.137 Sum_probs=57.3
Q ss_pred HHHHHHHHHcCCCCCCCccccccCCHhH-HHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEE
Q 048461 69 LQKQIDELSTFSDTPAPSVTRVLHTEND-VLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATG 147 (362)
Q Consensus 69 l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E-~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~ 147 (362)
++++|++|++++|+ |++| .++++||+++|+++|+++++|..+|+++ +++|+ .|.|+|.
T Consensus 8 ~~~~l~~L~~~~s~----------sg~e~~~~~~~l~~~l~~~g~~~~~d~~gnlia--------~~~g~---~~~i~l~ 66 (353)
T 1y0y_A 8 DYELLKKVVEAPGV----------SGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIA--------HKKGE---GPKVMIA 66 (353)
T ss_dssp CHHHHHHHHHSCCB----------TTCGGGTHHHHHHHHHGGGSSEEEECTTCCEEE--------EECCS---SCEEEEE
T ss_pred HHHHHHHHHhCCCC----------CccchHHHHHHHHHHHHhhCCeEEEcCCCCEEE--------EecCC---CccEEEE
Confidence 67899999999986 3456 7889999999999999999999999999 88664 3799999
Q ss_pred ecccCCC
Q 048461 148 SHIDAIP 154 (362)
Q Consensus 148 sHlDTVp 154 (362)
||+|||+
T Consensus 67 aH~D~v~ 73 (353)
T 1y0y_A 67 AHMDQIG 73 (353)
T ss_dssp EECCBCE
T ss_pred eccCccc
Confidence 9999995
No 40
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.26 E-value=7e-12 Score=121.96 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=62.0
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCc
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELA 142 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p 142 (362)
.++.++++++|++|++|+|+ |.+|.++++|++++|+++|+++++|..+|+++ +++|.. +.|
T Consensus 2 ~~~~~~~~~~l~~lv~i~s~----------s~~e~~~~~~l~~~l~~~g~~~~~d~~gnl~a--------~~~g~~-~~~ 62 (349)
T 2gre_A 2 AHHTKETMELIKELVSIPSP----------SGNTAKIINFIENYVSEWNVETKRNNKGALIL--------TVKGKN-DAQ 62 (349)
T ss_dssp -CHHHHHHHHHHHHHTSCCB----------TTCCHHHHHHHHHHTTTSSSEEEECSSSCEEE--------EECCSE-EEE
T ss_pred CccHHHHHHHHHHHHhCCCC----------CccHHHHHHHHHHHHHHhCCEEEEecCCcEEE--------EecCCC-CCc
Confidence 45678999999999999986 34567789999999999999999999999999 887642 247
Q ss_pred eEEEEecccCC
Q 048461 143 SVATGSHIDAI 153 (362)
Q Consensus 143 ~Ill~sHlDTV 153 (362)
+|+|.||+|||
T Consensus 63 ~ill~~H~Dtv 73 (349)
T 2gre_A 63 HRLLTAHVDTL 73 (349)
T ss_dssp EEEEEEECCBC
T ss_pred eEEEEeccccc
Confidence 89999999999
No 41
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.14 E-value=1.2e-10 Score=112.53 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=79.1
Q ss_pred cCHHHH-HHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHH--CCCeEEEcc-----------cCcEEEeccCC
Q 048461 64 VDTETL-QKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGI--SGLSVREDA-----------VGNIYGEISSS 129 (362)
Q Consensus 64 ~~~~~l-~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~--~Gl~v~~d~-----------~gNvia~~~~~ 129 (362)
++.+++ ++.|++|+.. |...|..+.++++||+++|++ +|++|++|. .+||+|
T Consensus 28 ~~~~~~~~~~l~~L~~~---------r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~----- 93 (329)
T 2afw_A 28 TSISEMWQNDLQPLLIE---------RYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIIS----- 93 (329)
T ss_dssp CCHHHHHHHTTGGGCSC---------CCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEE-----
T ss_pred cCHHHHHHHHHHHHcCC---------CCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEE-----
Confidence 678999 8999999532 222356677899999999999 999988764 479999
Q ss_pred CceeeeCCCCCCceEEEEecccCCCCC--------CccccHHHHHHHHHHHHHhhh
Q 048461 130 SRGVWIGNEAELASVATGSHIDAIPYS--------GKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 130 ~~~~~~G~~~~~p~Ill~sHlDTVp~g--------G~~Dg~~Gv~aal~a~~~L~s 177 (362)
+++|+ ..+.|++++|+||||.+ |..|++.|++++|++++.|+.
T Consensus 94 ---~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~ 144 (329)
T 2afw_A 94 ---TLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDK 144 (329)
T ss_dssp ---ESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHH
T ss_pred ---EECCC--CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHH
Confidence 99875 24789999999999986 788999999999999999874
No 42
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.07 E-value=2.5e-10 Score=110.54 Aligned_cols=68 Identities=22% Similarity=0.246 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
.+++++|++|++++|+ |++|.++++||+++|+++|+++++|..||+++ +++|++ .|.|+|
T Consensus 5 ~~~~~~l~~Lv~~~s~----------sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia--------~~~g~~--~~~i~l 64 (346)
T 1vho_A 5 METGKLLMELSNLDGP----------SGYETNVVSYIKSVIEPFVDEAKTTRHGSLIG--------YKKGKG--IGKLAF 64 (346)
T ss_dssp CCHHHHHHHHHHSCCB----------TTCCHHHHHHHHHHHGGGCSEEEECTTSCEEE--------EECCSS--SCEEEE
T ss_pred HHHHHHHHHHHcCCCC----------CcchHHHHHHHHHHHHhhCCEEEEecCCcEEE--------EEcCCC--CceEEE
Confidence 3578999999999986 34677899999999999999999999999999 887642 478999
Q ss_pred EecccCCC
Q 048461 147 GSHIDAIP 154 (362)
Q Consensus 147 ~sHlDTVp 154 (362)
.||+|||+
T Consensus 65 ~aH~DtV~ 72 (346)
T 1vho_A 65 FAHVDEIG 72 (346)
T ss_dssp EEECCBCC
T ss_pred EecCcccc
Confidence 99999994
No 43
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.03 E-value=5.2e-10 Score=108.12 Aligned_cols=64 Identities=16% Similarity=0.130 Sum_probs=56.4
Q ss_pred HHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEEecc
Q 048461 71 KQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATGSHI 150 (362)
Q Consensus 71 ~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHl 150 (362)
++|++|++|+|+ |++|.++++||+++|+++|+++++|..||+++ +++|+ +.|.|+|.|||
T Consensus 7 ~~l~~Lv~~~s~----------sg~e~~~~~~l~~~l~~~g~~v~~d~~gnlia--------~~~g~--~~~~vll~aH~ 66 (348)
T 1ylo_A 7 SLLKALSEADAI----------ASSEQEVRQILLEEAARLQKEVRFDGLGSVLI--------RLNES--TGPKVMICAHM 66 (348)
T ss_dssp HHHHHHHHSCCB----------TTBCHHHHHHHHHHHHHTTCCEEECTTCCEEE--------ECCCC--SSCEEEEEEEC
T ss_pred HHHHHHHcCCCC----------CCchHHHHHHHHHHHHhhCCEEEEecCCCEEE--------EecCC--CCceEEEEEcC
Confidence 789999999986 34677889999999999999999999999999 87764 24789999999
Q ss_pred cCCC
Q 048461 151 DAIP 154 (362)
Q Consensus 151 DTVp 154 (362)
|||+
T Consensus 67 DtV~ 70 (348)
T 1ylo_A 67 DEVG 70 (348)
T ss_dssp CCCE
T ss_pred Cccc
Confidence 9995
No 44
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=98.99 E-value=4.8e-09 Score=100.43 Aligned_cols=102 Identities=23% Similarity=0.339 Sum_probs=84.1
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc------------cCcEEEeccCCC
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA------------VGNIYGEISSSS 130 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~------------~gNvia~~~~~~ 130 (362)
..+.++..+.+++|++|+. |+.-|....++++||+++|+++|++|+.+. ..|||+
T Consensus 21 ~f~~~~a~~~l~~l~~fgp-------R~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~------ 87 (309)
T 4fuu_A 21 QFDADSAYLYVKNQVDFGP-------RVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIG------ 87 (309)
T ss_dssp CCCHHHHHHHHHHHHTTCC-------CCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEE------
T ss_pred ccCHHHHHHHHHHHhCcCC-------cCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEE------
Confidence 4688999999999999864 333478899999999999999999987652 248999
Q ss_pred ceeeeCCCCCCceEEEEecccCCCCC--------------CccccHHHHHHHHHHHHHhhhcccc
Q 048461 131 RGVWIGNEAELASVATGSHIDAIPYS--------------GKYDGVTGVLGALEAINVLKSRLLA 181 (362)
Q Consensus 131 ~~~~~G~~~~~p~Ill~sHlDTVp~g--------------G~~Dg~~Gv~aal~a~~~L~s~~~~ 181 (362)
+++|+. .+.|++++|+||+|.+ |..|.-.|++.+|++++.|......
T Consensus 88 --~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~~~~ 148 (309)
T 4fuu_A 88 --SYKPES--KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQQPE 148 (309)
T ss_dssp --EESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHSCCS
T ss_pred --EECCCC--CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhcCCC
Confidence 998864 3789999999999864 5568888999999999999754333
No 45
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=98.95 E-value=2.5e-09 Score=103.70 Aligned_cols=95 Identities=19% Similarity=0.265 Sum_probs=78.4
Q ss_pred cCHHHHHH-HHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHC--CCeEEEccc-----------CcEEEeccCC
Q 048461 64 VDTETLQK-QIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGIS--GLSVREDAV-----------GNIYGEISSS 129 (362)
Q Consensus 64 ~~~~~l~~-~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~--Gl~v~~d~~-----------gNvia~~~~~ 129 (362)
++.+++++ .|..+ + .+|...|..+.++++||+++|+++ |++|++|.. +||||
T Consensus 36 ~~~~~~~~~~L~~~--~-------~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia----- 101 (330)
T 3pb6_X 36 LDPQRLWSTYLRPL--L-------VVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVA----- 101 (330)
T ss_dssp CCHHHHHHHTTGGG--C-------SCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEE-----
T ss_pred CCHHHHHHHHHHHH--h-------CCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEE-----
Confidence 56777776 56665 2 245667899999999999999999 899988754 79999
Q ss_pred CceeeeCCCCCCceEEEEecccCCCC--C-----CccccHHHHHHHHHHHHHhhh
Q 048461 130 SRGVWIGNEAELASVATGSHIDAIPY--S-----GKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 130 ~~~~~~G~~~~~p~Ill~sHlDTVp~--g-----G~~Dg~~Gv~aal~a~~~L~s 177 (362)
+++|+. .+.|++++|+|||+. + |..|+..|++++|++++.|++
T Consensus 102 ---~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~ 151 (330)
T 3pb6_X 102 ---TLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDL 151 (330)
T ss_dssp ---ESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHH
T ss_pred ---EECCCC--CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHH
Confidence 998864 378999999999973 3 788999999999999999874
No 46
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=98.91 E-value=2.1e-09 Score=105.22 Aligned_cols=71 Identities=21% Similarity=0.413 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
.+++++|++|+++|++ |+.|.++++|++++|+++|+++++|..||+++ +++|+++++|.|+|
T Consensus 3 ~~~~~~l~~L~~ips~----------SG~E~~v~~~l~~~l~~~g~~~~~D~~GNli~--------~~~g~~~~~~~v~l 64 (355)
T 3kl9_A 3 TTLFSKIKEVTELAAV----------SGHEAPVRAYLREKLTPHVDEVVTDGLGGIFG--------IKHSEAVDAPRVLV 64 (355)
T ss_dssp HHHHHHHHHHHTSCCB----------TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEE--------EECCCSTTCCEEEE
T ss_pred HHHHHHHHHHHhCCCC----------CCCHHHHHHHHHHHHHHhCCEEEECCCCeEEE--------EECCcCCCCCeEEE
Confidence 3689999999999986 56788999999999999999999999999999 88875323589999
Q ss_pred EecccCCCC
Q 048461 147 GSHIDAIPY 155 (362)
Q Consensus 147 ~sHlDTVp~ 155 (362)
.||||||+.
T Consensus 65 ~aHmD~Vg~ 73 (355)
T 3kl9_A 65 ASHMDEVGF 73 (355)
T ss_dssp EEECCBCEE
T ss_pred Eeccccccc
Confidence 999999993
No 47
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.87 E-value=3.9e-10 Score=108.64 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcc-------cCcEEEeccCCCceeeeCCCC
Q 048461 67 ETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDA-------VGNIYGEISSSSRGVWIGNEA 139 (362)
Q Consensus 67 ~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~-------~gNvia~~~~~~~~~~~G~~~ 139 (362)
++++++|++|++|+|+ |++|.++++|++++|+++|+++++|+ .||+++ +++|
T Consensus 17 ~~~~~~l~~Lv~i~s~----------sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia--------~~~g--- 75 (321)
T 3cpx_A 17 FQGMQLLKELCSIHAP----------SGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIV--------LVFG--- 75 (321)
T ss_dssp CCHHHHHHHHHHSCCB----------TTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEE--------EEES---
T ss_pred HHHHHHHHHHHcCCCC----------CCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEE--------EecC---
Confidence 3478999999999986 45677889999999999999988888 899999 7765
Q ss_pred CCceEEEEecccCCC
Q 048461 140 ELASVATGSHIDAIP 154 (362)
Q Consensus 140 ~~p~Ill~sHlDTVp 154 (362)
+ |.|+|.||||||+
T Consensus 76 ~-~~ill~aH~DtV~ 89 (321)
T 3cpx_A 76 N-PRTAVFAHMDSIG 89 (321)
T ss_dssp S-CSEEEEEECCBCE
T ss_pred C-ceEEEEecCCcCC
Confidence 3 7899999999993
No 48
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.70 E-value=1.2e-08 Score=99.76 Aligned_cols=67 Identities=16% Similarity=0.236 Sum_probs=59.9
Q ss_pred HHHHHHHHHHcCCCCCCCccccccCCHhHH-HHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEE
Q 048461 68 TLQKQIDELSTFSDTPAPSVTRVLHTENDV-LARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVAT 146 (362)
Q Consensus 68 ~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~-~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill 146 (362)
.++++|++|++++++ |+.|. ++++|++++|+++|.++++|..||+++ +++|+ +|.|+|
T Consensus 10 ~~~~~l~~L~~ipsp----------SG~E~~~v~~~l~~~l~~~g~~~~~D~~GNvi~--------~~~g~---~~~v~l 68 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGV----------SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIA--------HFKGS---SPRIMV 68 (354)
T ss_dssp CCHHHHHHHHHSCCB----------TTCGGGTHHHHHHHHHHTTCSEEEECTTCCEEE--------EECCS---SSEEEE
T ss_pred HHHHHHHHHHhCCCC----------CcccHHHHHHHHHHHHHHhCCEEEEcCCCeEEE--------EEcCC---CCEEEE
Confidence 468999999999986 45677 999999999999999999999999999 88764 289999
Q ss_pred EecccCCCC
Q 048461 147 GSHIDAIPY 155 (362)
Q Consensus 147 ~sHlDTVp~ 155 (362)
.||||||+.
T Consensus 69 ~aHmDtVg~ 77 (354)
T 2vpu_A 69 AAHMDKIGV 77 (354)
T ss_dssp ECCCCBCEE
T ss_pred Eecccccce
Confidence 999999993
No 49
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=98.64 E-value=1.9e-07 Score=89.13 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=74.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc------------CcEEEeccCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV------------GNIYGEISSSSRG 132 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~------------gNvia~~~~~~~~ 132 (362)
+...+.+.|..+. +|.. .-|....++++||+++|+++|++|+.+.. .||||
T Consensus 9 ~~~~~~~~l~~il-~PR~--------~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~-------- 71 (312)
T 4f9u_A 9 DEVHFNRTLDSIL-VPRV--------VGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVG-------- 71 (312)
T ss_dssp CHHHHHHHHHHHC-SCCC--------TTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEE--------
T ss_pred HHHHHHHHHHHhc-CCCC--------CCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEE--------
Confidence 4555666677764 4433 23788899999999999999999876531 49999
Q ss_pred eeeCCCCCCceEEEEecccCCCCC------CccccHHHHHHHHHHHHHhhh
Q 048461 133 VWIGNEAELASVATGSHIDAIPYS------GKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 133 ~~~G~~~~~p~Ill~sHlDTVp~g------G~~Dg~~Gv~aal~a~~~L~s 177 (362)
+++|+. .+.|++++|.|+++.+ |.-|+-.|++++|++++.|.+
T Consensus 72 ~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~ 120 (312)
T 4f9u_A 72 TINPQA--QNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGA 120 (312)
T ss_dssp EESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHH
T ss_pred EECCCC--CceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHH
Confidence 998864 3689999999998753 677889999999999999863
No 50
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.58 E-value=5.7e-08 Score=94.53 Aligned_cols=67 Identities=22% Similarity=0.180 Sum_probs=59.2
Q ss_pred HHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEcccCcEEEeccCCCceeeeCCCCCCceEEEE
Q 048461 68 TLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAVGNIYGEISSSSRGVWIGNEAELASVATG 147 (362)
Q Consensus 68 ~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~gNvia~~~~~~~~~~~G~~~~~p~Ill~ 147 (362)
.+.++|++|++++++ |+.|.++++|++++|+++|.++++|..||+++ ++ |. ++|.|+|.
T Consensus 12 ~~~~~l~~L~~~psp----------SG~E~~v~~~i~~~l~~~~~e~~~D~~Gnvi~--------~~-g~--~~~~v~l~ 70 (343)
T 3isx_A 12 HMKELIRKLTEAFGP----------SGREEEVRSIILEELEGHIDGHRIDGLGNLIV--------WK-GS--GEKKVILD 70 (343)
T ss_dssp CCHHHHHHHHHSCCB----------TTCCHHHHHHHHHHHTTTCSEEEECTTCCEEE--------EE-CC--CSSEEEEE
T ss_pred HHHHHHHHHHhCCCC----------CCchHHHHHHHHHHHHHhCCEEEECCCCCEEE--------EE-CC--CCCEEEEE
Confidence 467899999999986 56789999999999999999999999999999 77 43 35899999
Q ss_pred ecccCCCC
Q 048461 148 SHIDAIPY 155 (362)
Q Consensus 148 sHlDTVp~ 155 (362)
||||+|..
T Consensus 71 aHmDevG~ 78 (343)
T 3isx_A 71 AHIDEIGV 78 (343)
T ss_dssp EECCBCEE
T ss_pred ecccccce
Confidence 99999983
No 51
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=98.54 E-value=5.3e-07 Score=87.07 Aligned_cols=94 Identities=21% Similarity=0.232 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc------------CcEEEeccCCCce
Q 048461 65 DTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV------------GNIYGEISSSSRG 132 (362)
Q Consensus 65 ~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~------------gNvia~~~~~~~~ 132 (362)
+...+.+.|..+. +|.. .-|....++++||.++|+++|++|+.+.. -||||
T Consensus 36 ~~~~~~~~l~~il-~pR~--------~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~-------- 98 (330)
T 4fai_A 36 DKLHLREAIDKIL-IPRV--------VGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIA-------- 98 (330)
T ss_dssp CHHHHHHHHHHHC-SCCC--------TTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEE--------
T ss_pred HHHHHHHHHHhhc-CCCC--------CCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEE--------
Confidence 5677777777774 4443 23788999999999999999999876531 49999
Q ss_pred eeeCCCCCCceEEEEecccCCCCC-----CccccHHHHHHHHHHHHHhhh
Q 048461 133 VWIGNEAELASVATGSHIDAIPYS-----GKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 133 ~~~G~~~~~p~Ill~sHlDTVp~g-----G~~Dg~~Gv~aal~a~~~L~s 177 (362)
+++|+. ...|++++|.|+++.+ |..|+-.|+++.|++++.|+.
T Consensus 99 ~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~ 146 (330)
T 4fai_A 99 TLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQE 146 (330)
T ss_dssp ESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHH
T ss_pred EECCCC--CcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHH
Confidence 998753 3689999999999754 667888999999999999863
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.28 E-value=1.1e-06 Score=87.50 Aligned_cols=90 Identities=18% Similarity=0.140 Sum_probs=64.9
Q ss_pred CccccccCCHhHHHHHHHHHHHH---HH--CCCeEEEcc-----cCcEEEeccCCCceeeeCCCC---CCceEEEEeccc
Q 048461 85 PSVTRVLHTENDVLARSYIKNLM---GI--SGLSVREDA-----VGNIYGEISSSSRGVWIGNEA---ELASVATGSHID 151 (362)
Q Consensus 85 ~Gv~r~~~s~~E~~a~~~l~~~L---~~--~Gl~v~~d~-----~gNvia~~~~~~~~~~~G~~~---~~p~Ill~sHlD 151 (362)
+.+.+..+|.++ +++|.++| ++ .+++++.|. ..||++ +++|+++ ..+.|++++|+|
T Consensus 162 ~~IP~~~Is~~~---a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~--------~~~g~~~~~~~~~~v~~~aH~D 230 (421)
T 2ek8_A 162 SFVAAVGITKQE---GDALAANLRAGEKITATVKVAGAEVKTLTSHNVIA--------TKKPDANKKNTNDIIIIGSHHD 230 (421)
T ss_dssp TCCEEEEECHHH---HHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEE--------EECCCSSTTCCCCEEEEEEECC
T ss_pred CCccEEEeCHHH---HHHHHHHhhhhccCCccccccccccccccccceEE--------EecCcccCCCCCCEEEEecccc
Confidence 345555566554 46688888 32 334455454 579999 9988532 347899999999
Q ss_pred CCCCC-CccccHHHHHHHHHHHHHhhhcccccccc
Q 048461 152 AIPYS-GKYDGVTGVLGALEAINVLKSRLLAGIES 185 (362)
Q Consensus 152 TVp~g-G~~Dg~~Gv~aal~a~~~L~s~~~~g~~~ 185 (362)
||+.+ |.+|+..|++++|++++.|+......++.
T Consensus 231 ~v~~g~Ga~D~~~G~a~~le~~~~l~~~~~~~~i~ 265 (421)
T 2ek8_A 231 SVEKAPGANDDASGVAVTLELARVMSKLKTDTELR 265 (421)
T ss_dssp CCTTCCCTTTTHHHHHHHHHHHHHHTTSCCSSEEE
T ss_pred cCCCCCCCCCCcHhHHHHHHHHHHHhccCCCceEE
Confidence 99998 89999999999999999997533333443
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=97.65 E-value=3.4e-05 Score=77.27 Aligned_cols=52 Identities=21% Similarity=0.166 Sum_probs=45.1
Q ss_pred cCcEEEeccCCCceeeeCCCCCCceEEEEecccCCCCC-CccccHHHHHHHHHHHHHhhhc
Q 048461 119 VGNIYGEISSSSRGVWIGNEAELASVATGSHIDAIPYS-GKYDGVTGVLGALEAINVLKSR 178 (362)
Q Consensus 119 ~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~g-G~~Dg~~Gv~aal~a~~~L~s~ 178 (362)
..||++ +++|+.+..+.|++++|+|+|+.+ |..|+..|+++.|++++.|+..
T Consensus 235 ~~Nvi~--------~~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~ 287 (444)
T 3iib_A 235 SYNVIA--------EVKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDL 287 (444)
T ss_dssp EEEEEE--------EECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTS
T ss_pred eEEEEE--------EEeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhc
Confidence 369999 999875334789999999999987 8999999999999999999854
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=96.83 E-value=0.0011 Score=70.13 Aligned_cols=51 Identities=22% Similarity=0.226 Sum_probs=43.3
Q ss_pred ccCcEEEeccCCCceeeeCCCCCCceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhh
Q 048461 118 AVGNIYGEISSSSRGVWIGNEAELASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 118 ~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s 177 (362)
...||+| +++|+....+.|++++|+|++++|+ .|+..|++++|++++.|..
T Consensus 311 ~~~NVi~--------~i~G~~~~~~~vllgaH~Ds~~~Ga-~D~~sG~a~lLe~ar~l~~ 361 (707)
T 3fed_A 311 RIYNVVG--------TIRGSVEPDRYVILGGHRDSWVFGA-IDPTSGVAVLQEIARSFGK 361 (707)
T ss_dssp EEEEEEE--------EECCSSEEEEEEEEEEECCCSSSCT-TTTHHHHHHHHHHHHHHHH
T ss_pred EEEEEEE--------EEeCCCCCCceEEEeccccCCCCCC-ccCcHHHHHHHHHHHHHHh
Confidence 4579999 9998743347899999999999865 7999999999999998864
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.98 E-value=0.007 Score=63.28 Aligned_cols=51 Identities=24% Similarity=0.210 Sum_probs=42.4
Q ss_pred ccCcEEEeccCCCceeeeCCCCCCceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhh
Q 048461 118 AVGNIYGEISSSSRGVWIGNEAELASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 118 ~~gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s 177 (362)
...||+| +++|+..+.+.|++++|+|++.+ |..|+..|++++|++++.|+.
T Consensus 265 ~~~NVi~--------~i~G~~~~~~~vvvgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~ 315 (640)
T 3kas_A 265 KILNIFG--------VIKGFVEPDHYVVVGAQRDAWGP-GAAKSGVGTALLLKLAQMFSD 315 (640)
T ss_dssp EEEEEEE--------EECCSSEEEEEEEEEEECCCSSC-CTTTTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEE--------EEeCCcCCCCceeeecccCCCCC-CCCcCcHHHHHHHHHHHHHHH
Confidence 3479999 99987322478999999999965 577999999999999999874
No 56
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=92.36 E-value=0.067 Score=53.68 Aligned_cols=51 Identities=14% Similarity=0.066 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHCCCe-------------EEEcccCcEEEeccCCCceeee-CCCC--CCceEEEEecccCCC
Q 048461 95 NDVLARSYIKNLMGISGLS-------------VREDAVGNIYGEISSSSRGVWI-GNEA--ELASVATGSHIDAIP 154 (362)
Q Consensus 95 ~E~~a~~~l~~~L~~~Gl~-------------v~~d~~gNvia~~~~~~~~~~~-G~~~--~~p~Ill~sHlDTVp 154 (362)
.++.+.++++++|++.|+. ++++..||+++ .+. |+++ +++. ++.+|+|++-
T Consensus 34 T~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~--------a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 34 TEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVA--------FAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp SHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBC--------CEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred CHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEE--------EEEeCCCCCCCCcE-EEEEccCcCC
Confidence 3678999999999999975 77777789777 444 5432 2345 9999999975
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=91.61 E-value=0.061 Score=53.50 Aligned_cols=54 Identities=13% Similarity=0.159 Sum_probs=41.4
Q ss_pred CHhHHHHHHHHHHHHHHCCC---------------eEEEccc-CcEEEeccCCCceeeeCCC--CCCceEEEEecccCCC
Q 048461 93 TENDVLARSYIKNLMGISGL---------------SVREDAV-GNIYGEISSSSRGVWIGNE--AELASVATGSHIDAIP 154 (362)
Q Consensus 93 s~~E~~a~~~l~~~L~~~Gl---------------~v~~d~~-gNvia~~~~~~~~~~~G~~--~~~p~Ill~sHlDTVp 154 (362)
|+.++.+.++++++|++.|+ +++++.. +|+++ ...|++ ++.+.+++.+|+|++-
T Consensus 15 ~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia--------~~~G~~~~~~~~~~ii~AH~Dspg 86 (428)
T 2ijz_A 15 SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIA--------IRLGRRSPLESGFRLVGAHTDSPC 86 (428)
T ss_dssp THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEE--------EECC--CCSTTCCEEEECBCCCSE
T ss_pred CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEE--------EEECCcCCCCCCcEEEEEcCCcCC
Confidence 56788889999999999887 4566666 89999 666643 1236899999999975
No 58
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=90.31 E-value=0.32 Score=48.56 Aligned_cols=52 Identities=17% Similarity=0.154 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHHCCCe-------------EEEccc-CcEEEeccCCCceeeeCCCCCCceEEEEecccCCC
Q 048461 95 NDVLARSYIKNLMGISGLS-------------VREDAV-GNIYGEISSSSRGVWIGNEAELASVATGSHIDAIP 154 (362)
Q Consensus 95 ~E~~a~~~l~~~L~~~Gl~-------------v~~d~~-gNvia~~~~~~~~~~~G~~~~~p~Ill~sHlDTVp 154 (362)
.++.+.++++++|++.||. ++++.. +|++| ...|+.++.+.+++.+|+|.+-
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia--------~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAA--------FRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEE--------EEBCSCGGGCCEEEEEECCCCE
T ss_pred CHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEE--------EEeCCCCCCCeEEEEEecccCC
Confidence 4788999999999999983 334444 68999 6556432246899999999974
No 59
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=82.89 E-value=2 Score=42.00 Aligned_cols=49 Identities=24% Similarity=0.305 Sum_probs=41.3
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCeEEEccc
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLSVREDAV 119 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~v~~d~~ 119 (362)
.++.+++.+.++.|.+. .|.+-|..+.++++|++++|+++|++++.++.
T Consensus 12 ~i~~~~~~~~l~~Ls~~--------~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~q~~ 60 (421)
T 2ek8_A 12 RTDAENMYNTIQFLSQA--------PRVAGSPEELKAVRYIEQQFKSYGYHVEVQPF 60 (421)
T ss_dssp TCCHHHHHHHHHHHTTS--------CCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hCCHHHHHHHHHHHhCC--------CCCCCCHHHHHHHHHHHHHHHHCCCceEEEEE
Confidence 46889999999999864 35556899999999999999999998876654
No 60
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=81.43 E-value=0.38 Score=48.22 Aligned_cols=25 Identities=20% Similarity=0.041 Sum_probs=21.5
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALT 355 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~ 355 (362)
-..|+|.|.+..+|+...++.+...
T Consensus 434 l~MHS~~E~~~~~Di~~~~~l~~af 458 (461)
T 2glj_A 434 LNMHAPWEISSKADIYETKNGYSAF 458 (461)
T ss_dssp ESTTSSSEEEEHHHHHHHHHHHHTT
T ss_pred cccchHHHHhhHHHHHHHHHHHHHH
Confidence 5689999999999999999887654
No 61
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=76.79 E-value=3 Score=41.18 Aligned_cols=41 Identities=15% Similarity=-0.057 Sum_probs=34.6
Q ss_pred eeeCCCCCCceEEEEecccCCCCCCccccHHHHHHHHHHHHHhhh
Q 048461 133 VWIGNEAELASVATGSHIDAIPYSGKYDGVTGVLGALEAINVLKS 177 (362)
Q Consensus 133 ~~~G~~~~~p~Ill~sHlDTVp~gG~~Dg~~Gv~aal~a~~~L~s 177 (362)
.++|+. .+.|++.+|+|+ +++..|+..|++..++.++.|+.
T Consensus 173 ~ipG~t--~~~IllsaH~cH--P~~ANDNaSG~a~lleLar~l~~ 213 (435)
T 3k9t_A 173 YIRGEL--EEEILLTTYTCH--PSMCNDNLSGVALITFIAKALSK 213 (435)
T ss_dssp EECCSS--SCEEEEEEECCC--CSCTTTTHHHHHHHHHHHHHHTT
T ss_pred EecCCC--CCEEEEEEEcCC--CCCCCccchHHHHHHHHHHHHhc
Confidence 568853 379999999998 55688999999999999999875
No 62
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=75.53 E-value=1.7 Score=32.71 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=27.3
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.-|.++|+++.+++.++++.+.+.+.++..
T Consensus 51 ~~H~~dE~v~i~~l~~~~~iy~~~i~~~~~ 80 (88)
T 1q7l_B 51 LLHDHDERLHEAVFLRGVDIYTRLLPALAS 80 (88)
T ss_dssp CTTSTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCeeEHHHHHHHHHHHHHHHHHHHc
Confidence 469999999999999999999999998753
No 63
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=74.28 E-value=4 Score=40.23 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHH-cCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCC-eEEEccc
Q 048461 66 TETLQKQIDELS-TFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGL-SVREDAV 119 (362)
Q Consensus 66 ~~~l~~~l~~Lv-~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl-~v~~d~~ 119 (362)
.+++++.+++|+ .++. |.+-|..+.++.+|+.++|+++|+ +|+.++.
T Consensus 20 ~~~~~~~l~~l~~~~G~-------R~~GS~g~~~a~~~i~~~l~~~G~~~v~~q~f 68 (444)
T 3iib_A 20 SSLGYDIVESLTVEVGP-------RLAGSEQDKVAVDWAIAKLQSLGFDRVYKEPV 68 (444)
T ss_dssp CCHHHHHHHHHHHHTCC-------CCTTSHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred ccHHHHHHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHcCCCceEeeeE
Confidence 357888999998 4532 556689999999999999999999 7876654
No 64
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=62.54 E-value=3.8 Score=40.82 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=25.7
Q ss_pred EeeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 330 IGYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 330 i~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.+..|.|+|+++++++.++++++.++|.+|..
T Consensus 459 ~~~~H~~dE~v~i~~l~~~~~i~~~~l~~l~~ 490 (492)
T 3khx_A 459 EDLMHQKNEYITKKQLFNATSIYLEAIYSLCV 490 (492)
T ss_dssp -----CCSCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCccCcCHHHHHHHHHHHHHHHHHHhh
Confidence 36799999999999999999999999999864
No 65
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=60.09 E-value=11 Score=39.72 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=40.0
Q ss_pred ccCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEcc
Q 048461 63 SVDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VREDA 118 (362)
Q Consensus 63 ~~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d~ 118 (362)
.++.+++.+.|+.|.+++.. +-|..+.++++|+++.|++.|++ +++++
T Consensus 21 ~~~~~~i~~~l~~lt~~ph~--------aGt~~~~~~a~yi~~~~~~~Gl~~v~~~~ 69 (707)
T 3fed_A 21 EMKAENIKSFLRSFTKLPHL--------AGTEQNFLLAKKIQTQWKKFGLDSAKLVH 69 (707)
T ss_dssp HCCHHHHHHHHHHHSSSCCC--------TTSHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred hCCHHHHHHHHHHHhcCCCc--------CCCHhHHHHHHHHHHHHHHcCCCceeEEe
Confidence 36788999999999987542 33788999999999999999997 87665
No 66
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=59.20 E-value=3.8 Score=38.56 Aligned_cols=31 Identities=26% Similarity=0.215 Sum_probs=28.6
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+|+++.+++.++++++.+++.+|..
T Consensus 346 ~~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~ 376 (377)
T 3isz_A 346 STIHKVNECVSVEDLGKCGEIYHKMLVNLLD 376 (377)
T ss_dssp TTTTSTTCEEEHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCCCcEEHHHHHHHHHHHHHHHHHHhh
Confidence 5689999999999999999999999998864
No 67
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=56.64 E-value=8.5 Score=36.92 Aligned_cols=40 Identities=35% Similarity=0.526 Sum_probs=32.6
Q ss_pred eecCeEEEEE----eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 321 SIPIKSQLEI----GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 321 vVP~~a~l~i----~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.||. +.+.+ +..|+|+|+++.+++..+++++.+++.+|+.
T Consensus 364 ~iP~-~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 364 ICPI-GMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp TSCE-EEEEECCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HCCE-EEEEeCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 3664 33444 2579999999999999999999999999875
No 68
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=53.14 E-value=5.8 Score=37.25 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=27.7
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..+|+|.|+++.+|+.++++++...+.++..
T Consensus 306 ~~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 306 KYMHTPVEMVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp BSTTSTTEEECHHHHHHHHHHHHHHHHHCC-
T ss_pred cccccHHHhcCHHHHHHHHHHHHHHHHHhhh
Confidence 4599999999999999999999999988754
No 69
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=52.84 E-value=5.8 Score=39.46 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=28.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.-.|.|+|+++++++.+++++|.+.|.+|+.
T Consensus 458 ~~~H~p~E~v~i~~l~~~~~~l~~~l~~l~~ 488 (490)
T 3mru_A 458 KFPHSPDEKVKIDTVQLFWDQMVALLEAIPE 488 (490)
T ss_dssp ESTTSTTCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHhhh
Confidence 3489999999999999999999999998864
No 70
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=51.38 E-value=5.5 Score=37.55 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=25.0
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLA 357 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~ 357 (362)
+..|.|+|+++.+++.++++++.++|.
T Consensus 342 ~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 342 SFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp SSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred hhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 468999999999999999999999886
No 71
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=51.34 E-value=12 Score=36.04 Aligned_cols=30 Identities=43% Similarity=0.635 Sum_probs=27.8
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|.|+|+++.+++.++++++.+++.++..
T Consensus 382 ~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 411 (423)
T 1z2l_A 382 ISHNPAERTNITDLAEGVKTLALMLYQLAW 411 (423)
T ss_dssp CCSSTTCCCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999998754
No 72
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=48.74 E-value=8.5 Score=36.74 Aligned_cols=31 Identities=6% Similarity=-0.022 Sum_probs=28.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
...|+|+|+++.+++.++++++.+.+.+++.
T Consensus 363 ~~~H~~~E~v~~~~l~~~~~~~~~~~~~l~~ 393 (396)
T 3rza_A 363 EKIHTTNERMPIKSLNLLASQVLEIIKIVAR 393 (396)
T ss_dssp BSTTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceeEHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999998864
No 73
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=48.52 E-value=6.8 Score=38.05 Aligned_cols=30 Identities=27% Similarity=0.301 Sum_probs=28.0
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|+|+|+++.+++.++++++.+.+.+++.
T Consensus 403 ~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 403 NYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp STTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 689999999999999999999999998864
No 74
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=46.56 E-value=6.9 Score=36.65 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=27.3
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..+|+|.|+++.+|+.++++.+..++.++.
T Consensus 308 ~~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 308 RHGHCAASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp BSCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCCcceEeeHHHHHHHHHHHHHHHHHhh
Confidence 459999999999999999999999998764
No 75
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=44.94 E-value=15 Score=36.19 Aligned_cols=30 Identities=43% Similarity=0.623 Sum_probs=27.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|.|+|+++.+++.++++++.+++.++.
T Consensus 417 ~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~ 446 (474)
T 2v8h_A 417 GLSHNYYEYSSPEEIENGFKVLLQAIINYD 446 (474)
T ss_dssp GCCSSTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999998774
No 76
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=44.10 E-value=11 Score=36.27 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=28.3
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|+|+|+++.+++..+++++.+++.++..
T Consensus 399 ~~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~ 429 (433)
T 3pfo_A 399 QGPHAFDERIDLESLRKTTLSIALFVAEWCG 429 (433)
T ss_dssp ECTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCceEEHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999988753
No 77
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=43.98 E-value=13 Score=38.59 Aligned_cols=49 Identities=27% Similarity=0.259 Sum_probs=36.9
Q ss_pred cCHHHHHHHHHHHHcCCCCCCCccccccCCHhHHHHHHHHHHHHHHCCCe-EEEc
Q 048461 64 VDTETLQKQIDELSTFSDTPAPSVTRVLHTENDVLARSYIKNLMGISGLS-VRED 117 (362)
Q Consensus 64 ~~~~~l~~~l~~Lv~i~s~~~~Gv~r~~~s~~E~~a~~~l~~~L~~~Gl~-v~~d 117 (362)
++.+++.+.|+.|.+..- ..|.+-|..+.++++||.+.|+++|++ ++.+
T Consensus 15 i~~~~i~~~L~~Lssd~~-----~~R~aGT~g~~~aa~yI~~~f~~~Gl~~v~~~ 64 (640)
T 3kas_A 15 LDSTDFTSTIKLLNENSY-----VPREAGSQKDENLALYVENQFREFKLSKVWRD 64 (640)
T ss_dssp HHTCCHHHHHHHTTSTTT-----SSCCTTSHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHHHHHHHHHHHhcccC-----CCCCCCCHHHHHHHHHHHHHHHHcCCcccccc
Confidence 455678888888887531 124455899999999999999999995 5544
No 78
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=43.77 E-value=9.7 Score=36.44 Aligned_cols=31 Identities=29% Similarity=0.426 Sum_probs=28.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.++|+|.|+++.+|+.++++.|...+.+++.
T Consensus 319 ~~~Hs~~E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 319 RYMHSQVELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp BSTTSTTCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred ccCcCcceEeeHHHHHHHHHHHHHHHHhccH
Confidence 4689999999999999999999999998754
No 79
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=40.66 E-value=12 Score=36.78 Aligned_cols=31 Identities=16% Similarity=0.167 Sum_probs=28.1
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|+|+|+++.+++..|++++.+.+.+|+.
T Consensus 453 ~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~ 483 (485)
T 3dlj_A 453 DGEHSQNEKINRWNYIEGTKLFAAFFLEMAQ 483 (485)
T ss_dssp CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 3589999999999999999999999998863
No 80
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=40.21 E-value=14 Score=34.78 Aligned_cols=29 Identities=10% Similarity=0.240 Sum_probs=27.0
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
...|+|+|+++.+++.++++++.+.+.++
T Consensus 343 ~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 343 EEIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp BSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999999887
No 81
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=36.50 E-value=17 Score=35.69 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=32.7
Q ss_pred eecCeEEEEEe------eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 321 SIPIKSQLEIG------YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 321 vVP~~a~l~i~------~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
.+|+--.+.++ ..|+|+|+++.+++..+++++.+.+.+++.
T Consensus 424 ~~Pg~p~v~~G~g~~~~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~ 470 (472)
T 3pfe_A 424 QFPKAQFMITGVLGPHSNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQ 470 (472)
T ss_dssp HCTTCEEEEECCBCTTCCTTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCCEEEecCCCCCCCCcCCCcceeHHHHHHHHHHHHHHHHHHhh
Confidence 35664234443 579999999999999999999999998863
No 82
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=35.98 E-value=12 Score=35.74 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=27.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
.++|+|.|+++.+|+.++++.|...+.+++
T Consensus 316 ~~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 316 RYIHSHQTLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp BSCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCcceEeeHHHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998764
No 83
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=35.59 E-value=19 Score=35.02 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=27.3
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|+|+|+++.+++.++++++.+++.++..
T Consensus 437 ~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 466 (470)
T 1lfw_A 437 VMHAANEFMMLDDLILSIAIYAEAIYELTK 466 (470)
T ss_dssp CTTSTTCEEEHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCcceEHHHHHHHHHHHHHHHHHHhc
Confidence 479999999999999999999999988753
No 84
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=35.48 E-value=18 Score=34.62 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=27.1
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|+|+|+++.+++.++++.+.+++.++..
T Consensus 377 ~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 406 (417)
T 1fno_A 377 NYHGKHEFVTLEGMEKAVQVIVRIAELTAK 406 (417)
T ss_dssp STTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999988753
No 85
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=34.67 E-value=14 Score=35.08 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=27.1
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
..|.|+|+++.+++.++++++.+++.++..
T Consensus 350 ~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 379 (393)
T 1vgy_A 350 TIHQINENVRLNDIPKLSAVYEGILVRLLA 379 (393)
T ss_dssp TTTSTTCEEETTHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCceeHHHHHHHHHHHHHHHHHHhc
Confidence 479999999999999999999999998753
No 86
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=33.24 E-value=16 Score=34.36 Aligned_cols=28 Identities=11% Similarity=0.086 Sum_probs=26.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 334 HKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 334 h~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
|.|+|+++.+++.++++++.+++.++..
T Consensus 333 H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 360 (364)
T 2rb7_A 333 HSRDECLHIPSLQSIYDPLMQLAREMEE 360 (364)
T ss_dssp TSTTCEEETTHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988754
No 87
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=33.17 E-value=19 Score=35.42 Aligned_cols=31 Identities=29% Similarity=0.303 Sum_probs=28.1
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
...|.|+|+++.+++.++++.+.+++.++.+
T Consensus 456 ~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 486 (487)
T 2qyv_A 456 RNAHSPDEKVHIPAVETYWKVLTGILAHIPS 486 (487)
T ss_dssp ESTTSTTCEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred CCCCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 4479999999999999999999999998864
No 88
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=32.28 E-value=26 Score=33.50 Aligned_cols=29 Identities=14% Similarity=-0.007 Sum_probs=26.7
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|.|+|+++.+++.++++++.+++.++.
T Consensus 372 ~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 400 (404)
T 1ysj_A 372 EWHHPAFTLDEEALTVASQYFAELAVIVL 400 (404)
T ss_dssp CTTCTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999998775
No 89
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=29.53 E-value=26 Score=34.14 Aligned_cols=31 Identities=26% Similarity=0.222 Sum_probs=27.7
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|.|+|+++.+++..+++++.+++.++..
T Consensus 446 ~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 476 (479)
T 2zog_A 446 DGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQ 476 (479)
T ss_dssp CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcEeHHHHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999988753
No 90
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=29.46 E-value=29 Score=33.27 Aligned_cols=29 Identities=17% Similarity=0.117 Sum_probs=26.5
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|.|+|+++.+++..+++++..++.++.
T Consensus 374 ~~H~~~E~i~~~~l~~~~~~~~~~~~~l~ 402 (418)
T 1xmb_A 374 SSHSPLYRINEDVLPYGAAIHASMAVQYL 402 (418)
T ss_dssp CTTCTTCCCCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999998764
No 91
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.73 E-value=20 Score=33.57 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=26.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
+..|+|+|+++.+++..+++++.+++.++.
T Consensus 326 ~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 326 SRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp GGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred ccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 347999999999999999999999887653
No 92
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=27.33 E-value=1.1e+02 Score=30.70 Aligned_cols=29 Identities=10% Similarity=0.001 Sum_probs=24.9
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
-+-|+|.|.+..+|+.+.++.+...++++
T Consensus 458 ryMHS~~E~~~~~D~~~~v~Ll~af~~~~ 486 (496)
T 3vat_A 458 LAMHSIRETACTTGVLQTITLFKGFFELF 486 (496)
T ss_dssp ESTTSSSEEEESHHHHHHHHHHHHHHHHH
T ss_pred hccccHHHHhhHHHHHHHHHHHHHHHHhH
Confidence 45799999999999999999888877655
No 93
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=27.01 E-value=23 Score=33.59 Aligned_cols=31 Identities=16% Similarity=0.124 Sum_probs=28.2
Q ss_pred eeeCC-CCCCCCHHHHHHHHHHHHHHHHHhhc
Q 048461 331 GYSHK-PEEYASCEDMENGVKVLALTLAKLSL 361 (362)
Q Consensus 331 ~~rh~-p~E~~~~ed~~~gi~~l~~~l~~l~~ 361 (362)
+..|. |+|+++.+++.++++++.+.+.++..
T Consensus 360 ~~~H~~~~E~i~~~~l~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 360 FGYHSDKAEYVDISAIPRRLYMAARLIMDLGA 391 (393)
T ss_dssp ECTTSSSCCEEEGGGHHHHHHHHHHHHHHHHC
T ss_pred CCccCCCcceEEehhHHHHHHHHHHHHHHHhc
Confidence 45799 99999999999999999999998864
No 94
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=26.28 E-value=27 Score=34.11 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=26.1
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKL 359 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l 359 (362)
+..|.|+|+++.+++.++++++.+.+.++
T Consensus 452 ~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 452 SRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp CCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 34799999999999999999999998765
No 95
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=24.36 E-value=31 Score=32.41 Aligned_cols=28 Identities=11% Similarity=0.278 Sum_probs=25.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHH
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAK 358 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~ 358 (362)
+..|.|+|+++.+++.++++++.+++.+
T Consensus 340 ~~~H~~~E~~~~~~l~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 340 AQAHTADEFVTLAQLQRYVESVNRIING 367 (369)
T ss_dssp GGTTCTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCceEEHHHHHHHHHHHHHHHHh
Confidence 4579999999999999999999998864
No 96
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=22.30 E-value=1.8e+02 Score=29.66 Aligned_cols=30 Identities=17% Similarity=-0.041 Sum_probs=25.4
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 331 GYSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 331 ~~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
=+-|+|.|.+..+|+...++.+...++++.
T Consensus 532 ryMHS~~E~~~~~Dv~~~vkLl~aFl~~~~ 561 (571)
T 4eme_A 532 LAMHSIREIAAVHDVFFLIKGVFAFYTYYN 561 (571)
T ss_dssp ESTTSSSEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHhhHHHHHHHHHHHHHHHHhHH
Confidence 357999999999999999998888777653
No 97
>2kkt_A Ataxin-7-like protein 3; zinc finger, transcription, activator, alternative splicing, chromatin regulator, metal-binding, nucleus; NMR {Homo sapiens}
Probab=22.14 E-value=31 Score=25.90 Aligned_cols=42 Identities=24% Similarity=0.315 Sum_probs=20.1
Q ss_pred cccccccchhhHHHHHHHHHHHhhhhhhhcCCchhhhhhhhccCCcccc
Q 048461 2 SLRFCNSHSLYHLLLVPVIFCSISAIYAKANEDTTIRTMEAFSGYPIHE 50 (362)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (362)
||+ |++|++..-=.+...+.+-++..-+++. +-+-.+|-..+
T Consensus 31 SLt-Ck~HS~~qRRaV~~~l~~~~~~~~~~~~------~~d~d~~e~~d 72 (84)
T 2kkt_A 31 SLR-CPQHTDEQRRTVRVYFLGPSAVLPEVES------SLDNDSFDMTD 72 (84)
T ss_dssp BTT-SSSCCHHHHHHHHHHHTCTTCCCC---------------------
T ss_pred ccc-cccccHHHHHhhhhhcccCCCcCCCccc------ceecccccccc
Confidence 566 9999999888888777665553333333 44555555444
No 98
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=21.82 E-value=30 Score=33.62 Aligned_cols=29 Identities=17% Similarity=0.017 Sum_probs=18.4
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 048461 332 YSHKPEEYASCEDMENGVKVLALTLAKLS 360 (362)
Q Consensus 332 ~rh~p~E~~~~ed~~~gi~~l~~~l~~l~ 360 (362)
..|+|+|+++.+++..+++++.+++.++.
T Consensus 404 ~~H~~~E~i~~~~l~~g~~~~~~~~~~~~ 432 (445)
T 3io1_A 404 GHHNEKFDFDESVMAVAVETLARVALNFP 432 (445)
T ss_dssp ---------CCCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999998764
Done!