BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048469
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana
GN=VEP1 PE=1 SV=1
Length = 388
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 131/356 (36%), Gaps = 120/356 (33%)
Query: 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNT 60
++IG+ + S E L GGPW+VYG A P+ +W +D YI D +++ +T
Sbjct: 30 LIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPID-YIQCDVSDAEDT 88
Query: 61 TEKLSLLFNEITHV--------HDPAHSAHANS--------------------------- 85
KLS L ++THV + + AN
Sbjct: 89 RSKLSPL-TDVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPYAPNLRHVCLQTGTK 147
Query: 86 -------------HDPPLREDLSRLPCQNFYCALEDLV---ASYMPVISYSIHRSSIIIG 129
HDPP ED+ RL QNFY ED++ + +++SIHR ++I G
Sbjct: 148 HYLGPFTNVDGPRHDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPNMIFG 207
Query: 130 SSSRSVYNSLLTLDV---ICKVFGVEFV---------PFDENDDFDFVGMMK------PK 171
S S+ N + TL V ICK G + F D D + + P
Sbjct: 208 FSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIWAAVDPY 267
Query: 172 AK----------------VWDEIAEQHGLYNI---------------------------- 187
AK +W +AEQ G+
Sbjct: 268 AKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGFEEGKNLGLVEMMKGKERVWEEMVKEN 327
Query: 188 ----NKLEEITCFEALINVLHFGFQHVCSMNKSREFGFFKFADTLKSLGMWVTKLR 239
KLEE+ + +V+ + SMNKS+E+GF F ++ S W+ K +
Sbjct: 328 QLQEKKLEEVGVW-WFADVILGVEGMIDSMNKSKEYGFLGFRNSNNSFISWIDKYK 382
>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1
SV=1
Length = 389
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 127/355 (35%), Gaps = 117/355 (32%)
Query: 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNT 60
+++G+ + S E L GGPW+VYG A + +W + ++ Y+ D ++ ++
Sbjct: 30 LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPIN-YVQCDISDPDDS 88
Query: 61 TEKLSLL---------------------------FNEI--------------------TH 73
KLS L F + H
Sbjct: 89 QAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKH 148
Query: 74 VHDPAHS-AHANSHDPPLREDLSRLPCQNFYCALEDLVASYMPV---ISYSIHRSSIIIG 129
P S SHDPP EDL RL NFY LED++ + +++S+HR I G
Sbjct: 149 YMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFG 208
Query: 130 SSSRSVYNSLLTLDV---ICKVFG---------VEFVPFDENDDFDFV------GMMKPK 171
S S+ N + TL V ICK G + + + D D + + P
Sbjct: 209 FSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY 268
Query: 172 AK----------------VWDEIAEQHG-------------LYNINK-----LEEITCFE 197
AK W +AEQ G L ++ K EEI
Sbjct: 269 AKNEAFNVSNGDVFKWKHFWKVLAEQFGVGCGEYEEGVDLKLQDLMKGKEPVWEEIVREN 328
Query: 198 AL-------INVLHFG---FQHVC---SMNKSREFGFFKFADTLKSLGMWVTKLR 239
L + + FG + C SMNKS+E GF F ++ + W+ K +
Sbjct: 329 GLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAK 383
>sp|Q8CPG6|DPO3_STAES DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=polC PE=3 SV=1
Length = 1442
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H GF+ S+ KS
Sbjct: 1304 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGFRLQPISLEKS 1363
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1364 QAFDFIIEGDTL 1375
>sp|Q5HPS7|DPO3_STAEQ DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=polC PE=3 SV=2
Length = 1438
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H GF+ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGFRLQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFDFIIEGDTL 1371
>sp|Q4L5W6|DPO3_STAHJ DNA polymerase III PolC-type OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=polC PE=3 SV=1
Length = 1438
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H GF+ S+ KS
Sbjct: 1300 DFDLITMIKDKESIKNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGFRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFDFIIEGDTL 1371
>sp|P0C1P9|DPO3_STAAU DNA polymerase III PolC-type OS=Staphylococcus aureus GN=polC PE=3
SV=1
Length = 1435
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1297 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1356
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1357 QAFEFIIEGDTL 1368
>sp|P63982|DPO3_STAAN DNA polymerase III PolC-type OS=Staphylococcus aureus (strain N315)
GN=polC PE=1 SV=1
Length = 1438
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|P63981|DPO3_STAAM DNA polymerase III PolC-type OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=polC PE=3 SV=1
Length = 1438
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|Q2YXK4|DPO3_STAAB DNA polymerase III PolC-type OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=polC PE=3 SV=1
Length = 1438
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|A7X1P4|DPO3_STAA1 DNA polymerase III PolC-type OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=polC PE=3 SV=1
Length = 1438
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|P68852|DPO3_STAAW DNA polymerase III PolC-type OS=Staphylococcus aureus (strain MW2)
GN=polC PE=3 SV=1
Length = 1436
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1298 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1357
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1358 QAFEFIIEGDTL 1369
>sp|Q2G1Z8|DPO3_STAA8 DNA polymerase III PolC-type OS=Staphylococcus aureus (strain NCTC
8325) GN=polC PE=3 SV=1
Length = 1436
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1298 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1357
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1358 QAFEFIIEGDTL 1369
>sp|Q2FHH4|DPO3_STAA3 DNA polymerase III PolC-type OS=Staphylococcus aureus (strain USA300)
GN=polC PE=3 SV=1
Length = 1436
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1298 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1357
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1358 QAFEFIIEGDTL 1369
>sp|Q6G9U9|DPO3_STAAS DNA polymerase III PolC-type OS=Staphylococcus aureus (strain
MSSA476) GN=polC PE=3 SV=1
Length = 1438
Score = 34.3 bits (77), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|A6QGG4|DPO3_STAAE DNA polymerase III PolC-type OS=Staphylococcus aureus (strain Newman)
GN=polC PE=3 SV=1
Length = 1438
Score = 34.3 bits (77), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|Q5HGG7|DPO3_STAAC DNA polymerase III PolC-type OS=Staphylococcus aureus (strain COL)
GN=polC PE=3 SV=2
Length = 1438
Score = 34.3 bits (77), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F DTL
Sbjct: 1360 QAFEFIIEGDTL 1371
>sp|Q9UHC9|NPCL1_HUMAN Niemann-Pick C1-like protein 1 OS=Homo sapiens GN=NPC1L1 PE=1 SV=2
Length = 1359
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 21 IALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPAHS 80
+A+G VYGSA C Q W + F ++GN L + F H+ +P +
Sbjct: 183 LAVGTMCGVYGSALCNAQRW---------LNFQG-DTGNGLAPLDITF----HLLEPGQA 228
Query: 81 AHANSHDPPLREDLSRLPCQN------FYCALEDLVASYMPVISYSIHRSSIIIGSSSRS 134
+ PL E ++R C C+ +D AS + S+ +G
Sbjct: 229 VGSGIQ--PLNEGVAR--CNESQGDDVATCSCQDCAASCPAIARPQALDSTFYLG----Q 280
Query: 135 VYNSLLTLDVICKVFGVE---FVPFDENDDFDFVGMMKPK 171
+ SL+ + ++C VF V V F D M+ PK
Sbjct: 281 MPGSLVLIIILCSVFAVVTILLVGFRVAPARDKSKMVDPK 320
>sp|Q6GHH1|DPO3_STAAR DNA polymerase III PolC-type OS=Staphylococcus aureus (strain
MRSA252) GN=polC PE=3 SV=1
Length = 1438
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 161 DFDFVGMMKPKAKVWDEIAEQHGLY-NINKLEE--ITCFEALINVLHFGFQ-HVCSMNKS 216
DFD + M+K K + + + + + Y ++ K E+ +T E + + H G++ S+ KS
Sbjct: 1300 DFDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKS 1359
Query: 217 REFGFFKFADTL 228
+ F F +TL
Sbjct: 1360 QAFEFIIEGETL 1371
>sp|Q87QN6|BIOB_VIBPA Biotin synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=bioB PE=3 SV=1
Length = 350
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 123 RSSIIIGSSSRSVYNSLLTLDVICKVFGVEFVPFDENDDFDFVGM------MKPKAKVWD 176
R+ +++ ++ + + ++++ KV G D+ D FDF+ + M P++ V
Sbjct: 202 RAGLLVELANLPTHPESVPINMLVKVKGTPLETVDDVDPFDFIRLIAIARIMMPQSAVR- 260
Query: 177 EIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSREFGFFKFADTLKSLGM 233
G N+N+ + CF A N + +G + + + N S + F K LG+
Sbjct: 261 ---LSAGRENMNEQMQALCFMAGANSVFYGCKLLTTPNPSEDKDMMLF----KKLGI 310
>sp|Q2KI62|PTCD3_BOVIN Pentatricopeptide repeat domain-containing protein 3, mitochondrial
OS=Bos taurus GN=PTCD3 PE=2 SV=1
Length = 688
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 105 ALEDLVASYMPVISYSIHRSSIIIGSSSRSVYNSLLTLDVICKVFGVEFVPFDENDDFDF 164
+E +A+Y +I S GSS L+ D++ ++ G F P D +DD F
Sbjct: 367 GIEPSLATYHHIIQLFYQHESPSKGSS-------LIIYDIMDEITGKTFSPKDPDDDMFF 419
Query: 165 VGMMKPKAKVWD-EIAEQ-HGLYN 186
M+ + + D E+A Q HGL N
Sbjct: 420 QSAMRVCSSLRDLELAYQVHGLLN 443
>sp|A7MX36|BIOB_VIBHB Biotin synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=bioB PE=3 SV=2
Length = 350
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 123 RSSIIIGSSSRSVYNSLLTLDVICKVFGVEFVPFDENDDFDFVGM------MKPKAKVWD 176
R+ +++ ++ V+ + ++++ KV G D+ + FDF+ + M P++ V
Sbjct: 202 RAGLLVELANLPVHPESVPINMLVKVKGTPLEEVDDVEPFDFIRLIAIARIMMPQSAVR- 260
Query: 177 EIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSREFGFFKF 224
G N+N+ + CF A N + +G + + + N S + F
Sbjct: 261 ---LSAGRENMNEQMQALCFMAGANSVFYGCKLLTTPNPSEDKDMMLF 305
>sp|Q9VRA2|MOCOS_DROME Molybdenum cofactor sulfurase OS=Drosophila melanogaster GN=mal
PE=1 SV=1
Length = 781
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 117 ISYSIHRSSIIIGSSSRSVYNSLLTLDVICKVFGVEFVPFDENDDFDFVGMMKPKAKVWD 176
IS H+++ + S NSLLT C G + +P + + G+ KP ++W
Sbjct: 144 ISGGKHKANGKVHEVSGKTGNSLLTFSAQCNFSGYK-IPLEVIEQIQIDGLAKPGKELWS 202
Query: 177 EIAEQ 181
+ E+
Sbjct: 203 SLGEK 207
>sp|Q4VSN3|DUSTY_TETNG Dual serine/threonine and tyrosine protein kinase OS=Tetraodon
nigroviridis GN=dstyk PE=2 SV=1
Length = 922
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 71 ITHVHDPAHSA---HANSHDPPLRE-DLSRLPC---QNFYCALEDLVASYMPVISYSIHR 123
+ DPAH H P L+E + +PC Q ALED S +P+I Y+++R
Sbjct: 180 LDECEDPAHRQAELEITLHHPLLQEAKVMVVPCPSVQPIEEALEDCTRSVIPIILYAVNR 239
Query: 124 SSI 126
S+
Sbjct: 240 DSL 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,827,394
Number of Sequences: 539616
Number of extensions: 3779117
Number of successful extensions: 7296
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 7283
Number of HSP's gapped (non-prelim): 33
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)