Query 048469
Match_columns 239
No_of_seqs 191 out of 2221
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 09:48:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15181 Vi polysaccharide bio 99.8 6.4E-19 1.4E-23 155.0 16.0 119 1-132 19-200 (348)
2 PLN02214 cinnamoyl-CoA reducta 99.8 7.4E-19 1.6E-23 154.3 16.1 218 1-238 14-316 (342)
3 PLN02989 cinnamyl-alcohol dehy 99.8 1.7E-18 3.7E-23 150.5 16.7 220 1-239 9-320 (325)
4 COG1087 GalE UDP-glucose 4-epi 99.8 3.7E-18 8.1E-23 143.1 17.2 121 1-132 4-177 (329)
5 KOG1502 Flavonol reductase/cin 99.8 2E-18 4.3E-23 147.6 15.4 219 1-239 10-321 (327)
6 PRK09987 dTDP-4-dehydrorhamnos 99.8 3.2E-18 6.9E-23 147.6 16.2 110 1-134 4-161 (299)
7 PLN02662 cinnamyl-alcohol dehy 99.8 9E-18 1.9E-22 145.6 16.6 68 1-78 8-84 (322)
8 PLN02427 UDP-apiose/xylose syn 99.8 7.2E-18 1.6E-22 150.2 15.6 68 1-78 18-94 (386)
9 PRK11908 NAD-dependent epimera 99.8 1.1E-17 2.4E-22 146.9 16.0 120 1-132 5-184 (347)
10 TIGR02622 CDP_4_6_dhtase CDP-g 99.8 1.7E-17 3.6E-22 145.9 15.2 70 1-78 8-83 (349)
11 PLN02260 probable rhamnose bio 99.8 1.5E-17 3.2E-22 158.0 15.9 220 1-238 10-319 (668)
12 PLN02572 UDP-sulfoquinovose sy 99.8 1.8E-17 3.9E-22 150.2 15.7 70 1-78 51-144 (442)
13 PLN02986 cinnamyl-alcohol dehy 99.8 5.6E-17 1.2E-21 140.9 17.3 68 1-78 9-85 (322)
14 TIGR03466 HpnA hopanoid-associ 99.8 6.8E-17 1.5E-21 140.0 17.7 122 1-133 4-177 (328)
15 PRK10217 dTDP-glucose 4,6-dehy 99.7 5.4E-17 1.2E-21 142.7 16.8 123 1-132 5-195 (355)
16 PRK08125 bifunctional UDP-gluc 99.7 4.5E-17 9.8E-22 154.4 16.6 120 1-132 319-498 (660)
17 PLN00198 anthocyanidin reducta 99.7 9.3E-17 2E-21 140.5 16.4 68 1-78 13-88 (338)
18 PLN02650 dihydroflavonol-4-red 99.7 1.3E-16 2.7E-21 140.4 17.0 68 1-78 9-85 (351)
19 TIGR01472 gmd GDP-mannose 4,6- 99.7 1.3E-16 2.8E-21 139.9 16.4 123 1-132 4-191 (343)
20 COG1088 RfbB dTDP-D-glucose 4, 99.7 2E-16 4.4E-21 132.2 16.5 222 1-238 4-316 (340)
21 PLN02695 GDP-D-mannose-3',5'-e 99.7 1.5E-16 3.2E-21 141.2 16.6 125 1-132 25-202 (370)
22 PRK11150 rfaD ADP-L-glycero-D- 99.7 6.6E-17 1.4E-21 139.5 13.7 119 1-132 3-175 (308)
23 TIGR01181 dTDP_gluc_dehyt dTDP 99.7 2E-16 4.3E-21 136.2 16.4 220 1-239 3-311 (317)
24 TIGR01214 rmlD dTDP-4-dehydror 99.7 1.2E-16 2.7E-21 136.3 14.6 207 1-237 3-286 (287)
25 PLN02725 GDP-4-keto-6-deoxyman 99.7 1.1E-16 2.4E-21 137.5 14.3 109 1-132 1-165 (306)
26 COG0451 WcaG Nucleoside-diphos 99.7 4.7E-16 1E-20 133.8 16.5 221 1-238 4-308 (314)
27 PLN00016 RNA-binding protein; 99.7 2.2E-16 4.7E-21 140.4 14.8 220 1-239 56-351 (378)
28 PF01073 3Beta_HSD: 3-beta hyd 99.7 3.4E-16 7.3E-21 133.8 14.9 129 1-139 1-193 (280)
29 PLN02653 GDP-mannose 4,6-dehyd 99.7 6.9E-16 1.5E-20 135.1 16.9 124 1-133 10-198 (340)
30 PLN02896 cinnamyl-alcohol dehy 99.7 4.2E-16 9E-21 137.3 15.5 68 1-78 14-87 (353)
31 PLN02166 dTDP-glucose 4,6-dehy 99.7 3.3E-16 7.2E-21 141.6 13.4 212 1-238 124-423 (436)
32 PRK10084 dTDP-glucose 4,6 dehy 99.7 1E-15 2.3E-20 134.4 15.8 70 1-78 4-81 (352)
33 PRK10675 UDP-galactose-4-epime 99.7 1E-15 2.2E-20 133.6 15.1 122 1-132 4-185 (338)
34 PLN02240 UDP-glucose 4-epimera 99.7 2.2E-15 4.7E-20 132.3 16.2 120 1-131 9-191 (352)
35 TIGR02197 heptose_epim ADP-L-g 99.7 2.6E-15 5.5E-20 129.5 16.1 122 1-132 2-175 (314)
36 PLN02206 UDP-glucuronate decar 99.7 1.3E-15 2.7E-20 138.0 14.2 115 1-132 123-297 (442)
37 PF01370 Epimerase: NAD depend 99.6 9.9E-16 2.1E-20 126.6 7.8 120 1-131 2-174 (236)
38 KOG1430 C-3 sterol dehydrogena 99.6 2.4E-14 5.1E-19 124.8 15.8 229 1-238 8-345 (361)
39 TIGR01179 galE UDP-glucose-4-e 99.6 4.3E-14 9.3E-19 122.1 17.4 121 1-132 3-181 (328)
40 PF04321 RmlD_sub_bind: RmlD s 99.6 5.2E-15 1.1E-19 126.9 11.5 209 1-238 4-285 (286)
41 PLN02583 cinnamoyl-CoA reducta 99.6 1E-14 2.2E-19 125.7 12.6 66 1-73 10-84 (297)
42 TIGR01777 yfcH conserved hypot 99.6 1.8E-14 3.9E-19 122.8 13.2 33 1-38 2-34 (292)
43 PRK05865 hypothetical protein; 99.6 6.9E-15 1.5E-19 141.0 11.3 217 1-239 4-257 (854)
44 KOG1371 UDP-glucose 4-epimeras 99.6 7.4E-14 1.6E-18 118.4 15.1 120 1-130 6-186 (343)
45 COG1091 RfbD dTDP-4-dehydrorha 99.6 8.1E-14 1.8E-18 117.6 14.0 206 1-238 4-280 (281)
46 KOG0747 Putative NAD+-dependen 99.6 9.6E-14 2.1E-18 115.5 13.2 221 1-238 10-322 (331)
47 KOG1429 dTDP-glucose 4-6-dehyd 99.5 2.4E-13 5.1E-18 113.2 15.2 115 1-132 31-205 (350)
48 TIGR03589 PseB UDP-N-acetylglu 99.5 1.7E-14 3.6E-19 125.8 8.1 68 1-78 8-82 (324)
49 PLN02686 cinnamoyl-CoA reducta 99.5 6.2E-14 1.3E-18 124.3 11.4 62 1-68 57-130 (367)
50 PF13460 NAD_binding_10: NADH( 99.5 2.7E-14 5.9E-19 114.0 6.5 67 1-78 2-68 (183)
51 CHL00194 ycf39 Ycf39; Provisio 99.4 2.4E-13 5.2E-18 118.1 6.2 68 1-78 4-72 (317)
52 COG1090 Predicted nucleoside-d 99.4 1.3E-11 2.9E-16 102.8 14.0 34 1-39 2-35 (297)
53 PF07993 NAD_binding_4: Male s 99.3 3.9E-12 8.5E-17 106.9 6.1 67 2-78 1-95 (249)
54 PRK07201 short chain dehydroge 99.3 1.1E-11 2.4E-16 117.5 9.1 119 1-132 4-183 (657)
55 PLN02657 3,8-divinyl protochlo 99.3 9.7E-12 2.1E-16 111.2 7.0 72 1-78 64-144 (390)
56 COG1089 Gmd GDP-D-mannose dehy 99.2 7.6E-10 1.6E-14 92.6 16.6 70 1-78 6-86 (345)
57 KOG1431 GDP-L-fucose synthetas 99.2 3.2E-10 7E-15 91.9 11.6 114 1-133 5-172 (315)
58 COG3320 Putative dehydrogenase 99.2 1.5E-10 3.3E-15 100.5 10.3 128 1-137 4-207 (382)
59 TIGR01746 Thioester-redct thio 99.2 1.2E-10 2.7E-15 101.9 9.9 68 1-78 3-96 (367)
60 TIGR03649 ergot_EASG ergot alk 99.2 8.9E-11 1.9E-15 100.2 8.5 70 1-78 3-75 (285)
61 PLN02996 fatty acyl-CoA reduct 99.1 3.8E-10 8.3E-15 103.7 10.4 68 1-78 15-120 (491)
62 PRK12320 hypothetical protein; 99.1 3.8E-10 8.3E-15 106.6 9.7 114 1-132 4-137 (699)
63 PLN02778 3,5-epimerase/4-reduc 99.1 1.9E-09 4.2E-14 93.0 13.1 29 1-34 13-41 (298)
64 COG2910 Putative NADH-flavin r 99.1 6.6E-10 1.4E-14 87.4 8.7 61 2-69 5-65 (211)
65 PLN00141 Tic62-NAD(P)-related 99.0 7.6E-10 1.6E-14 92.9 8.6 68 1-78 21-93 (251)
66 PRK09135 pteridine reductase; 99.0 8.3E-10 1.8E-14 91.7 8.5 72 1-78 10-93 (249)
67 PF05368 NmrA: NmrA-like famil 99.0 7.6E-11 1.6E-15 97.8 1.7 62 1-68 2-66 (233)
68 PLN02503 fatty acyl-CoA reduct 98.9 7.6E-09 1.7E-13 96.7 10.5 69 1-78 123-227 (605)
69 PLN03209 translocon at the inn 98.9 3.3E-09 7.1E-14 97.9 7.5 68 1-78 84-167 (576)
70 COG0702 Predicted nucleoside-d 98.9 6.8E-09 1.5E-13 87.5 8.3 62 1-68 4-65 (275)
71 PRK06179 short chain dehydroge 98.9 4.8E-09 1E-13 88.6 6.5 71 1-78 8-81 (270)
72 PRK12825 fabG 3-ketoacyl-(acyl 98.8 8.9E-09 1.9E-13 85.3 7.6 71 1-78 10-92 (249)
73 PLN02260 probable rhamnose bio 98.8 1.6E-08 3.4E-13 96.5 9.5 25 1-30 384-408 (668)
74 PRK06196 oxidoreductase; Provi 98.8 1.7E-08 3.7E-13 87.5 8.0 72 1-78 30-107 (315)
75 PRK12823 benD 1,6-dihydroxycyc 98.8 1.3E-08 2.9E-13 85.4 7.0 72 1-78 12-92 (260)
76 PRK08264 short chain dehydroge 98.8 1.4E-08 3E-13 84.1 6.3 71 1-78 10-81 (238)
77 PRK05786 fabG 3-ketoacyl-(acyl 98.7 2.1E-08 4.6E-13 82.9 5.9 72 1-78 9-89 (238)
78 PRK06398 aldose dehydrogenase; 98.7 3.2E-08 7E-13 83.3 6.6 70 1-80 10-82 (258)
79 PRK07806 short chain dehydroge 98.7 2.2E-08 4.8E-13 83.4 5.5 73 1-79 10-93 (248)
80 PRK09186 flagellin modificatio 98.7 2.4E-08 5.3E-13 83.5 5.3 72 1-78 8-91 (256)
81 PRK06101 short chain dehydroge 98.7 2.1E-08 4.6E-13 83.4 4.8 72 1-78 5-79 (240)
82 PF02719 Polysacc_synt_2: Poly 98.7 1.1E-08 2.4E-13 87.1 3.1 71 1-78 2-85 (293)
83 COG0300 DltE Short-chain dehyd 98.7 5.1E-08 1.1E-12 82.1 6.8 75 1-81 10-95 (265)
84 PRK07856 short chain dehydroge 98.7 3.7E-08 8.1E-13 82.4 6.0 71 1-78 10-83 (252)
85 PRK05993 short chain dehydroge 98.7 1.8E-08 3.9E-13 85.7 4.0 74 1-80 8-86 (277)
86 PRK06482 short chain dehydroge 98.7 2.2E-08 4.7E-13 85.0 4.5 71 1-78 6-84 (276)
87 PRK06182 short chain dehydroge 98.7 1.8E-08 3.8E-13 85.5 3.8 72 1-78 7-82 (273)
88 PRK07041 short chain dehydroge 98.7 2.3E-08 5.1E-13 82.3 4.3 73 1-80 1-79 (230)
89 PRK06194 hypothetical protein; 98.7 2E-08 4.4E-13 85.6 4.0 73 1-79 10-92 (287)
90 PRK08267 short chain dehydroge 98.7 3.2E-08 7E-13 83.1 5.2 74 1-80 5-87 (260)
91 PRK07523 gluconate 5-dehydroge 98.6 6.3E-08 1.4E-12 81.1 6.7 72 1-78 14-95 (255)
92 PRK08219 short chain dehydroge 98.6 3.1E-08 6.7E-13 81.2 4.6 71 1-79 7-80 (227)
93 PRK06180 short chain dehydroge 98.6 3.4E-08 7.3E-13 84.0 4.8 72 1-78 8-86 (277)
94 PRK06523 short chain dehydroge 98.6 6.2E-08 1.3E-12 81.3 6.3 71 1-79 13-86 (260)
95 PRK05693 short chain dehydroge 98.6 2.4E-08 5.1E-13 84.7 3.8 72 1-79 5-81 (274)
96 PRK08177 short chain dehydroge 98.6 5.9E-08 1.3E-12 79.9 6.0 73 1-79 5-80 (225)
97 PRK12745 3-ketoacyl-(acyl-carr 98.6 5.5E-08 1.2E-12 81.3 5.9 74 1-80 6-90 (256)
98 PRK07231 fabG 3-ketoacyl-(acyl 98.6 3.5E-08 7.6E-13 82.1 4.6 74 1-80 9-91 (251)
99 PRK12429 3-hydroxybutyrate deh 98.6 4.2E-08 9.1E-13 82.0 4.9 72 1-78 8-89 (258)
100 TIGR03443 alpha_am_amid L-amin 98.6 1.9E-07 4.1E-12 95.7 10.0 68 1-78 975-1069(1389)
101 PRK06171 sorbitol-6-phosphate 98.6 1.1E-07 2.4E-12 80.2 6.9 72 1-80 13-87 (266)
102 PRK05557 fabG 3-ketoacyl-(acyl 98.6 7.1E-08 1.5E-12 79.9 5.7 73 1-79 9-92 (248)
103 PRK12826 3-ketoacyl-(acyl-carr 98.6 4.1E-08 8.8E-13 81.7 4.2 72 1-78 10-91 (251)
104 PRK07102 short chain dehydroge 98.6 3.2E-08 7E-13 82.3 3.5 72 1-78 5-84 (243)
105 TIGR01963 PHB_DH 3-hydroxybuty 98.6 4.4E-08 9.6E-13 81.7 4.3 72 1-78 5-86 (255)
106 PRK07890 short chain dehydroge 98.6 3.7E-08 8.1E-13 82.4 3.8 71 1-78 9-90 (258)
107 COG1086 Predicted nucleoside-d 98.6 1.6E-07 3.5E-12 85.6 8.0 70 1-78 254-333 (588)
108 PRK06138 short chain dehydroge 98.6 5.7E-08 1.2E-12 81.0 4.6 71 1-78 9-89 (252)
109 PRK12828 short chain dehydroge 98.6 6.8E-08 1.5E-12 79.6 5.0 72 1-78 11-90 (239)
110 PRK07814 short chain dehydroge 98.6 8E-08 1.7E-12 81.0 5.4 74 1-80 14-97 (263)
111 PRK13394 3-hydroxybutyrate deh 98.6 9.7E-08 2.1E-12 80.0 5.9 72 1-78 11-92 (262)
112 PRK09009 C factor cell-cell si 98.6 1.5E-07 3.3E-12 77.7 6.9 70 1-78 4-75 (235)
113 PRK06914 short chain dehydroge 98.6 1.2E-07 2.6E-12 80.5 6.3 70 1-78 7-89 (280)
114 PRK10538 malonic semialdehyde 98.6 6.9E-08 1.5E-12 80.7 4.4 73 1-79 4-83 (248)
115 PRK06483 dihydromonapterin red 98.5 8.8E-08 1.9E-12 79.3 4.9 73 1-79 6-83 (236)
116 PRK05653 fabG 3-ketoacyl-(acyl 98.5 1.5E-07 3.2E-12 77.9 6.0 72 1-78 9-90 (246)
117 PRK09291 short chain dehydroge 98.5 9.4E-08 2E-12 79.9 4.9 70 1-79 6-82 (257)
118 PRK05717 oxidoreductase; Valid 98.5 8.4E-08 1.8E-12 80.4 4.6 74 1-80 14-94 (255)
119 PRK08278 short chain dehydroge 98.5 1.9E-07 4.1E-12 79.3 6.8 74 1-80 10-100 (273)
120 PRK08263 short chain dehydroge 98.5 9.1E-08 2E-12 81.2 4.7 72 1-78 7-85 (275)
121 PRK07074 short chain dehydroge 98.5 1.1E-07 2.4E-12 79.7 5.1 72 1-78 6-85 (257)
122 PRK06197 short chain dehydroge 98.5 1.1E-07 2.3E-12 82.2 5.1 73 1-79 20-104 (306)
123 PRK09134 short chain dehydroge 98.5 1.2E-07 2.7E-12 79.6 5.3 72 1-78 13-95 (258)
124 PRK07577 short chain dehydroge 98.5 2.2E-07 4.8E-12 76.6 6.7 70 1-80 7-78 (234)
125 PRK07024 short chain dehydroge 98.5 5.2E-08 1.1E-12 81.9 2.8 72 1-78 6-86 (257)
126 PRK08628 short chain dehydroge 98.5 1.4E-07 3.1E-12 79.1 5.4 72 1-78 11-91 (258)
127 PRK08265 short chain dehydroge 98.5 1.2E-07 2.6E-12 80.0 4.9 73 1-79 10-89 (261)
128 TIGR03325 BphB_TodD cis-2,3-di 98.5 1.2E-07 2.6E-12 79.8 4.9 73 1-79 9-88 (262)
129 PLN02253 xanthoxin dehydrogena 98.5 1.4E-07 3.1E-12 80.1 5.4 73 1-79 22-103 (280)
130 TIGR01832 kduD 2-deoxy-D-gluco 98.5 1E-07 2.2E-12 79.4 4.4 74 1-80 9-90 (248)
131 PRK12829 short chain dehydroge 98.5 1.1E-07 2.4E-12 79.7 4.7 71 1-78 15-94 (264)
132 PRK08220 2,3-dihydroxybenzoate 98.5 2.1E-07 4.6E-12 77.6 6.2 70 1-78 12-84 (252)
133 PRK07023 short chain dehydroge 98.5 2.4E-07 5.3E-12 77.0 6.6 74 1-80 5-87 (243)
134 PRK07067 sorbitol dehydrogenas 98.5 1E-07 2.3E-12 79.9 4.4 72 1-78 10-88 (257)
135 PRK06953 short chain dehydroge 98.5 1.4E-07 3E-12 77.5 5.0 73 1-79 5-79 (222)
136 PRK08017 oxidoreductase; Provi 98.5 1.3E-07 2.8E-12 79.1 4.8 73 1-79 6-83 (256)
137 PRK07478 short chain dehydroge 98.5 1.2E-07 2.6E-12 79.4 4.6 73 1-79 10-92 (254)
138 PRK08213 gluconate 5-dehydroge 98.5 1.2E-07 2.5E-12 79.7 4.5 72 1-79 16-98 (259)
139 PRK05875 short chain dehydroge 98.5 8.5E-08 1.8E-12 81.3 3.6 72 1-78 11-94 (276)
140 PRK06550 fabG 3-ketoacyl-(acyl 98.5 2.2E-07 4.7E-12 76.8 5.9 67 1-78 9-75 (235)
141 PRK07454 short chain dehydroge 98.5 1.3E-07 2.8E-12 78.5 4.6 73 1-79 10-92 (241)
142 TIGR03206 benzo_BadH 2-hydroxy 98.5 1.1E-07 2.5E-12 79.0 4.2 72 1-78 7-88 (250)
143 PRK07453 protochlorophyllide o 98.5 1.4E-07 3E-12 82.1 4.9 72 1-78 10-91 (322)
144 PRK06181 short chain dehydroge 98.5 1.4E-07 3E-12 79.4 4.7 72 1-78 5-86 (263)
145 PRK08643 acetoin reductase; Va 98.5 1.5E-07 3.3E-12 78.8 4.8 74 1-80 6-89 (256)
146 PRK05884 short chain dehydroge 98.5 9.5E-08 2.1E-12 78.8 3.4 72 1-78 4-77 (223)
147 PRK07326 short chain dehydroge 98.5 1.3E-07 2.8E-12 78.2 4.2 72 1-78 10-90 (237)
148 PRK07774 short chain dehydroge 98.5 1.6E-07 3.5E-12 78.2 4.8 73 1-80 10-93 (250)
149 PRK09072 short chain dehydroge 98.5 1.1E-07 2.4E-12 80.1 3.8 74 1-80 9-90 (263)
150 PRK07666 fabG 3-ketoacyl-(acyl 98.5 1.3E-07 2.9E-12 78.3 4.2 72 1-78 11-92 (239)
151 PRK05866 short chain dehydroge 98.5 2.1E-07 4.6E-12 80.0 5.6 73 1-79 44-126 (293)
152 PRK12746 short chain dehydroge 98.5 1.6E-07 3.4E-12 78.6 4.6 73 1-79 10-99 (254)
153 PRK08251 short chain dehydroge 98.5 2.4E-07 5.2E-12 77.1 5.5 74 1-80 6-91 (248)
154 PRK07904 short chain dehydroge 98.5 3.4E-07 7.3E-12 77.0 6.4 72 1-78 12-95 (253)
155 PRK06463 fabG 3-ketoacyl-(acyl 98.5 1.7E-07 3.6E-12 78.6 4.5 73 1-79 11-88 (255)
156 PRK07775 short chain dehydroge 98.5 1.7E-07 3.7E-12 79.6 4.5 72 1-78 14-95 (274)
157 PRK07825 short chain dehydroge 98.5 1.3E-07 2.7E-12 80.2 3.6 72 1-78 9-86 (273)
158 PRK07060 short chain dehydroge 98.5 1.3E-07 2.9E-12 78.4 3.6 71 1-78 13-85 (245)
159 PRK06841 short chain dehydroge 98.5 2.1E-07 4.5E-12 77.8 4.8 74 1-80 19-99 (255)
160 PRK06057 short chain dehydroge 98.4 1.3E-07 2.9E-12 79.2 3.6 73 1-79 11-88 (255)
161 PRK12939 short chain dehydroge 98.4 3.3E-07 7.1E-12 76.2 6.0 72 1-78 11-92 (250)
162 PRK12481 2-deoxy-D-gluconate 3 98.4 2E-07 4.2E-12 78.2 4.6 74 1-80 12-93 (251)
163 PRK05867 short chain dehydroge 98.4 2E-07 4.2E-12 78.1 4.5 73 1-79 13-95 (253)
164 PRK06114 short chain dehydroge 98.4 3.9E-07 8.5E-12 76.4 6.4 74 1-80 12-96 (254)
165 TIGR01830 3oxo_ACP_reduc 3-oxo 98.4 2.4E-07 5.2E-12 76.4 5.0 72 1-78 2-84 (239)
166 PRK05854 short chain dehydroge 98.4 2.9E-07 6.4E-12 79.9 5.7 73 1-79 18-102 (313)
167 PRK06924 short chain dehydroge 98.4 3.6E-07 7.8E-12 76.2 6.0 61 1-67 5-70 (251)
168 PRK05876 short chain dehydroge 98.4 1.9E-07 4.2E-12 79.5 4.3 72 1-78 10-91 (275)
169 PRK12827 short chain dehydroge 98.4 3.4E-07 7.3E-12 76.0 5.7 72 1-78 10-95 (249)
170 PRK12935 acetoacetyl-CoA reduc 98.4 2.7E-07 5.9E-12 76.8 5.1 72 1-79 10-93 (247)
171 PRK07063 short chain dehydroge 98.4 2.2E-07 4.7E-12 78.1 4.4 73 1-79 11-95 (260)
172 PRK08063 enoyl-(acyl carrier p 98.4 2E-07 4.3E-12 77.7 4.1 72 1-78 8-90 (250)
173 PRK08339 short chain dehydroge 98.4 2.9E-07 6.2E-12 77.8 5.0 73 1-79 12-94 (263)
174 PRK07576 short chain dehydroge 98.4 2.3E-07 5.1E-12 78.3 4.4 72 1-78 13-94 (264)
175 PRK06172 short chain dehydroge 98.4 2.5E-07 5.5E-12 77.3 4.6 74 1-80 11-94 (253)
176 PRK08226 short chain dehydroge 98.4 2.2E-07 4.9E-12 78.1 4.2 74 1-80 10-92 (263)
177 PRK06200 2,3-dihydroxy-2,3-dih 98.4 2.4E-07 5.2E-12 78.0 4.4 74 1-80 10-90 (263)
178 PRK08340 glucose-1-dehydrogena 98.4 2.4E-07 5.3E-12 77.8 4.4 73 1-79 4-85 (259)
179 PRK05650 short chain dehydroge 98.4 3.3E-07 7E-12 77.6 5.1 72 1-78 4-85 (270)
180 TIGR01829 AcAcCoA_reduct aceto 98.4 2.8E-07 6E-12 76.3 4.5 73 1-79 4-87 (242)
181 PRK12384 sorbitol-6-phosphate 98.4 2.1E-07 4.5E-12 78.1 3.6 73 1-79 6-90 (259)
182 PRK06935 2-deoxy-D-gluconate 3 98.4 3.3E-07 7.1E-12 77.0 4.7 74 1-80 19-101 (258)
183 PRK12937 short chain dehydroge 98.4 5.5E-07 1.2E-11 74.7 6.0 73 1-79 9-92 (245)
184 PRK08589 short chain dehydroge 98.4 2.6E-07 5.7E-12 78.4 4.1 73 1-79 10-91 (272)
185 PRK07062 short chain dehydroge 98.4 2.6E-07 5.6E-12 77.8 4.0 74 1-80 12-97 (265)
186 PRK07677 short chain dehydroge 98.4 3.2E-07 7E-12 76.7 4.5 72 1-78 5-86 (252)
187 PRK08416 7-alpha-hydroxysteroi 98.4 3.8E-07 8.3E-12 76.7 5.0 72 1-78 12-95 (260)
188 PRK12744 short chain dehydroge 98.4 6.2E-07 1.3E-11 75.2 6.2 72 1-78 12-97 (257)
189 PRK05565 fabG 3-ketoacyl-(acyl 98.4 3.5E-07 7.6E-12 75.8 4.7 72 1-78 9-91 (247)
190 PRK12743 oxidoreductase; Provi 98.4 4.1E-07 9E-12 76.3 5.1 73 1-79 6-89 (256)
191 PRK12742 oxidoreductase; Provi 98.4 2.8E-07 6.1E-12 76.1 4.0 73 1-80 10-85 (237)
192 PRK07069 short chain dehydroge 98.4 7.6E-07 1.7E-11 74.1 6.6 73 1-79 3-88 (251)
193 PRK09730 putative NAD(P)-bindi 98.4 3.8E-07 8.3E-12 75.6 4.7 72 1-78 5-87 (247)
194 PRK06077 fabG 3-ketoacyl-(acyl 98.4 4.1E-07 9E-12 75.7 4.9 73 1-80 10-94 (252)
195 TIGR02685 pter_reduc_Leis pter 98.4 5.7E-07 1.2E-11 76.0 5.8 72 1-79 5-93 (267)
196 PRK07578 short chain dehydroge 98.4 7.6E-07 1.7E-11 71.8 6.2 61 1-79 4-64 (199)
197 PRK12824 acetoacetyl-CoA reduc 98.4 6E-07 1.3E-11 74.4 5.7 74 1-80 6-90 (245)
198 PRK06701 short chain dehydroge 98.4 6.3E-07 1.4E-11 76.9 5.9 74 1-80 50-134 (290)
199 PRK06139 short chain dehydroge 98.4 3.6E-07 7.7E-12 80.0 4.4 72 1-78 11-92 (330)
200 PRK06500 short chain dehydroge 98.4 3.8E-07 8.3E-12 75.8 4.4 73 1-79 10-89 (249)
201 PRK06949 short chain dehydroge 98.4 4.3E-07 9.3E-12 76.0 4.5 72 1-78 13-94 (258)
202 COG4221 Short-chain alcohol de 98.4 5.1E-07 1.1E-11 74.5 4.7 72 1-78 10-89 (246)
203 PRK06128 oxidoreductase; Provi 98.4 5.8E-07 1.3E-11 77.4 5.3 73 1-79 59-143 (300)
204 TIGR02415 23BDH acetoin reduct 98.4 4.1E-07 8.9E-12 75.9 4.2 72 1-78 4-85 (254)
205 PRK12367 short chain dehydroge 98.4 8.1E-07 1.8E-11 74.5 6.0 70 1-80 18-89 (245)
206 PRK08642 fabG 3-ketoacyl-(acyl 98.3 5.5E-07 1.2E-11 75.1 4.9 72 1-78 9-89 (253)
207 PRK07035 short chain dehydroge 98.3 4.7E-07 1E-11 75.6 4.5 73 1-79 12-94 (252)
208 KOG2865 NADH:ubiquinone oxidor 98.3 1.2E-06 2.5E-11 73.8 6.7 66 2-74 66-137 (391)
209 PRK07109 short chain dehydroge 98.3 4E-07 8.6E-12 79.8 4.2 72 1-78 12-93 (334)
210 PRK12936 3-ketoacyl-(acyl-carr 98.3 5.3E-07 1.2E-11 74.7 4.7 74 1-80 10-90 (245)
211 PRK08085 gluconate 5-dehydroge 98.3 5.3E-07 1.1E-11 75.5 4.6 73 1-79 13-95 (254)
212 PRK09242 tropinone reductase; 98.3 7.1E-07 1.5E-11 74.8 5.3 74 1-80 13-98 (257)
213 PRK08277 D-mannonate oxidoredu 98.3 5.5E-07 1.2E-11 76.4 4.6 73 1-79 14-96 (278)
214 PRK08217 fabG 3-ketoacyl-(acyl 98.3 6.4E-07 1.4E-11 74.5 4.8 73 1-79 9-91 (253)
215 PRK06947 glucose-1-dehydrogena 98.3 5.4E-07 1.2E-11 75.0 4.2 74 1-80 6-90 (248)
216 PRK06124 gluconate 5-dehydroge 98.3 6.2E-07 1.4E-11 75.0 4.6 73 1-79 15-97 (256)
217 PRK06125 short chain dehydroge 98.3 6.4E-07 1.4E-11 75.2 4.6 71 1-78 11-89 (259)
218 PRK07985 oxidoreductase; Provi 98.3 1.1E-06 2.4E-11 75.6 6.0 73 1-79 53-137 (294)
219 TIGR01831 fabG_rel 3-oxoacyl-( 98.3 9.1E-07 2E-11 73.2 5.3 72 1-78 2-84 (239)
220 PRK06198 short chain dehydroge 98.3 6E-07 1.3E-11 75.3 4.2 73 1-79 10-93 (260)
221 PRK08993 2-deoxy-D-gluconate 3 98.3 7.9E-07 1.7E-11 74.5 4.9 74 1-80 14-95 (253)
222 PRK06113 7-alpha-hydroxysteroi 98.3 6.8E-07 1.5E-11 74.9 4.5 73 1-80 15-98 (255)
223 PRK05872 short chain dehydroge 98.3 9.9E-07 2.1E-11 75.9 5.2 72 1-78 13-93 (296)
224 PRK07097 gluconate 5-dehydroge 98.3 8.8E-07 1.9E-11 74.7 4.6 74 1-80 14-97 (265)
225 PRK06123 short chain dehydroge 98.3 8.8E-07 1.9E-11 73.6 4.5 72 1-78 6-88 (248)
226 PRK05855 short chain dehydroge 98.3 7.7E-07 1.7E-11 82.9 4.5 73 1-79 319-401 (582)
227 PLN00015 protochlorophyllide r 98.3 1.1E-06 2.4E-11 76.0 5.1 72 1-78 1-83 (308)
228 PRK12938 acetyacetyl-CoA reduc 98.3 1.3E-06 2.8E-11 72.6 5.1 73 1-79 7-90 (246)
229 PRK06079 enoyl-(acyl carrier p 98.2 1.2E-06 2.6E-11 73.5 4.7 74 1-80 11-93 (252)
230 TIGR01289 LPOR light-dependent 98.2 1.5E-06 3.3E-11 75.4 5.3 72 1-78 7-89 (314)
231 PRK07424 bifunctional sterol d 98.2 1.4E-06 3.1E-11 78.2 5.2 68 1-78 182-253 (406)
232 PRK07832 short chain dehydroge 98.2 1.6E-06 3.6E-11 73.4 5.4 72 1-78 4-86 (272)
233 PRK12748 3-ketoacyl-(acyl-carr 98.2 2.5E-06 5.4E-11 71.5 6.3 74 1-80 9-105 (256)
234 PF00106 adh_short: short chai 98.2 1.3E-06 2.8E-11 68.2 4.0 72 1-78 4-88 (167)
235 smart00822 PKS_KR This enzymat 98.2 2.1E-06 4.5E-11 66.8 5.2 74 1-80 4-91 (180)
236 PRK08936 glucose-1-dehydrogena 98.2 1.8E-06 3.8E-11 72.6 5.0 72 1-78 11-93 (261)
237 KOG1205 Predicted dehydrogenas 98.2 2.2E-06 4.7E-11 72.9 5.4 75 1-81 16-102 (282)
238 KOG1221 Acyl-CoA reductase [Li 98.2 9.7E-06 2.1E-10 73.2 9.6 71 1-78 16-114 (467)
239 PRK07791 short chain dehydroge 98.2 2.2E-06 4.8E-11 73.3 5.0 73 1-79 10-101 (286)
240 PRK08303 short chain dehydroge 98.2 4.9E-06 1.1E-10 72.1 7.1 72 1-78 12-103 (305)
241 PRK07831 short chain dehydroge 98.2 2.4E-06 5.1E-11 71.9 5.0 73 1-79 21-106 (262)
242 PRK07792 fabG 3-ketoacyl-(acyl 98.2 2.7E-06 5.8E-11 73.6 5.1 72 1-78 16-97 (306)
243 PRK07201 short chain dehydroge 98.1 1.9E-06 4.2E-11 81.9 4.3 74 1-80 375-458 (657)
244 PRK08945 putative oxoacyl-(acy 98.1 2.6E-06 5.6E-11 71.0 4.5 73 1-79 16-101 (247)
245 PRK06484 short chain dehydroge 98.1 2.2E-06 4.8E-11 79.2 4.4 73 1-79 273-352 (520)
246 TIGR02632 RhaD_aldol-ADH rhamn 98.1 2.2E-06 4.7E-11 82.0 4.3 73 1-79 418-502 (676)
247 PRK08594 enoyl-(acyl carrier p 98.1 5.7E-06 1.2E-10 69.7 6.2 74 1-80 11-97 (257)
248 PRK12747 short chain dehydroge 98.1 2.4E-06 5.1E-11 71.4 3.9 74 1-80 8-98 (252)
249 KOG1372 GDP-mannose 4,6 dehydr 98.1 8.7E-06 1.9E-10 67.3 7.0 69 1-77 32-113 (376)
250 TIGR01500 sepiapter_red sepiap 98.1 5.3E-06 1.1E-10 69.6 5.5 72 1-78 4-95 (256)
251 PRK07889 enoyl-(acyl carrier p 98.1 4.9E-06 1.1E-10 70.0 5.2 74 1-80 11-95 (256)
252 PRK05599 hypothetical protein; 98.1 4.9E-06 1.1E-10 69.5 5.0 71 1-78 4-85 (246)
253 PRK06484 short chain dehydroge 98.1 4.2E-06 9.1E-11 77.4 4.9 72 1-78 9-87 (520)
254 PF08659 KR: KR domain; Inter 98.1 6.1E-06 1.3E-10 66.0 5.2 72 1-78 4-89 (181)
255 PRK08703 short chain dehydroge 98.1 5.7E-06 1.2E-10 68.5 5.1 72 1-78 10-95 (239)
256 PRK08862 short chain dehydroge 98.0 4.3E-06 9.3E-11 69.2 4.0 73 1-79 9-92 (227)
257 PRK08309 short chain dehydroge 98.0 3.7E-06 8.1E-11 67.1 3.4 60 1-67 4-69 (177)
258 PRK08324 short chain dehydroge 98.0 2.5E-06 5.3E-11 81.7 2.8 72 1-78 426-506 (681)
259 PRK06505 enoyl-(acyl carrier p 98.0 5.2E-06 1.1E-10 70.6 4.2 73 1-79 11-94 (271)
260 PRK07370 enoyl-(acyl carrier p 98.0 1.1E-05 2.4E-10 67.9 6.2 74 1-80 10-97 (258)
261 PRK06720 hypothetical protein; 98.0 6.4E-06 1.4E-10 65.3 4.4 72 1-78 20-101 (169)
262 PRK06940 short chain dehydroge 98.0 6E-06 1.3E-10 70.2 4.2 70 1-78 6-84 (275)
263 PRK07984 enoyl-(acyl carrier p 98.0 1E-05 2.2E-10 68.5 5.3 74 1-80 10-94 (262)
264 PLN02780 ketoreductase/ oxidor 98.0 8.2E-06 1.8E-10 71.1 4.6 72 1-80 57-142 (320)
265 PRK07533 enoyl-(acyl carrier p 98.0 9.3E-06 2E-10 68.3 4.8 74 1-80 14-98 (258)
266 PRK08261 fabG 3-ketoacyl-(acyl 97.9 9.3E-06 2E-10 73.9 4.5 74 1-80 214-294 (450)
267 PRK08690 enoyl-(acyl carrier p 97.9 1.6E-05 3.5E-10 67.0 4.8 74 1-80 10-94 (261)
268 KOG4039 Serine/threonine kinas 97.9 8.7E-05 1.9E-09 58.5 8.2 61 1-66 22-83 (238)
269 PRK08415 enoyl-(acyl carrier p 97.9 1.7E-05 3.7E-10 67.5 4.7 73 1-80 9-93 (274)
270 PRK08159 enoyl-(acyl carrier p 97.8 1.8E-05 3.8E-10 67.3 4.4 74 1-80 14-98 (272)
271 PRK12859 3-ketoacyl-(acyl-carr 97.8 3.2E-05 6.9E-10 64.9 5.8 72 1-78 10-104 (256)
272 PRK06603 enoyl-(acyl carrier p 97.8 2E-05 4.4E-10 66.4 4.4 74 1-80 12-96 (260)
273 KOG1209 1-Acyl dihydroxyaceton 97.8 4.2E-05 9.1E-10 62.1 5.1 72 1-78 11-89 (289)
274 PRK06997 enoyl-(acyl carrier p 97.8 2.7E-05 5.8E-10 65.7 4.3 74 1-80 10-94 (260)
275 KOG1014 17 beta-hydroxysteroid 97.7 2.7E-05 5.8E-10 66.4 3.7 70 1-78 53-134 (312)
276 KOG1208 Dehydrogenases with di 97.7 6.6E-05 1.4E-09 65.2 5.9 72 1-78 39-122 (314)
277 PRK09620 hypothetical protein; 97.6 9.3E-05 2E-09 61.5 5.0 67 6-80 28-97 (229)
278 PRK06732 phosphopantothenate-- 97.5 0.00021 4.6E-09 59.3 6.4 68 4-80 23-91 (229)
279 COG1028 FabG Dehydrogenases wi 97.5 8.8E-05 1.9E-09 61.7 4.1 74 1-80 9-96 (251)
280 KOG1201 Hydroxysteroid 17-beta 97.5 0.00022 4.7E-09 60.7 5.5 71 1-78 42-122 (300)
281 TIGR00715 precor6x_red precorr 97.5 0.00034 7.3E-09 59.1 6.6 69 1-78 4-73 (256)
282 COG3967 DltE Short-chain dehyd 97.5 0.00012 2.5E-09 59.2 3.5 72 1-78 9-86 (245)
283 KOG1207 Diacetyl reductase/L-x 97.4 7.3E-05 1.6E-09 58.8 2.2 71 1-78 11-85 (245)
284 KOG4288 Predicted oxidoreducta 97.4 0.00011 2.4E-09 60.2 3.4 60 1-66 56-117 (283)
285 KOG1203 Predicted dehydrogenas 97.4 0.0002 4.3E-09 63.9 5.2 32 1-37 83-114 (411)
286 PRK05579 bifunctional phosphop 97.4 0.00039 8.4E-09 62.4 6.5 64 6-79 213-276 (399)
287 KOG4169 15-hydroxyprostaglandi 97.3 0.00083 1.8E-08 55.1 7.1 72 1-78 9-91 (261)
288 COG1748 LYS9 Saccharopine dehy 97.2 0.00041 8.8E-09 61.7 4.3 60 1-67 5-69 (389)
289 cd01336 MDH_cytoplasmic_cytoso 97.1 0.00075 1.6E-08 59.0 5.1 74 1-78 6-86 (325)
290 KOG0725 Reductases with broad 97.1 0.00088 1.9E-08 57.1 5.3 72 1-78 12-97 (270)
291 KOG1200 Mitochondrial/plastidi 97.1 0.0012 2.5E-08 53.1 5.5 72 1-78 18-98 (256)
292 PF03435 Saccharop_dh: Sacchar 97.0 0.00099 2.2E-08 59.5 5.4 68 1-78 2-75 (386)
293 KOG1611 Predicted short chain- 97.0 0.0019 4.1E-08 53.0 5.8 73 1-78 7-92 (249)
294 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.00099 2.1E-08 53.7 4.1 71 1-81 32-108 (194)
295 KOG1210 Predicted 3-ketosphing 96.9 0.0009 2E-08 57.3 3.4 72 1-78 37-120 (331)
296 TIGR02813 omega_3_PfaA polyket 96.8 0.0023 4.9E-08 69.1 6.1 72 1-78 2001-2129(2582)
297 PLN02730 enoyl-[acyl-carrier-p 96.8 0.0032 6.9E-08 54.5 6.0 29 1-35 13-43 (303)
298 PF13561 adh_short_C2: Enoyl-( 96.6 0.00078 1.7E-08 55.9 1.4 71 4-80 1-83 (241)
299 TIGR02114 coaB_strep phosphopa 96.5 0.0037 8.1E-08 51.8 4.7 64 5-80 23-90 (227)
300 PRK13656 trans-2-enoyl-CoA red 96.4 0.008 1.7E-07 53.5 6.3 74 1-81 45-142 (398)
301 TIGR00521 coaBC_dfp phosphopan 96.4 0.0084 1.8E-07 53.7 6.2 63 6-78 210-273 (390)
302 PF13950 Epimerase_Csub: UDP-g 96.2 0.0039 8.5E-08 40.8 2.5 31 207-237 23-54 (62)
303 PRK12428 3-alpha-hydroxysteroi 96.2 0.0044 9.6E-08 51.5 3.5 56 13-78 1-56 (241)
304 KOG2774 NAD dependent epimeras 95.9 0.011 2.4E-07 48.9 4.3 68 1-77 48-117 (366)
305 PRK06300 enoyl-(acyl carrier p 95.8 0.011 2.4E-07 51.1 4.3 30 1-35 12-43 (299)
306 KOG1610 Corticosteroid 11-beta 95.8 0.014 3E-07 50.2 4.7 72 1-78 33-114 (322)
307 PRK12548 shikimate 5-dehydroge 95.6 0.023 4.9E-07 48.9 5.3 70 1-81 130-210 (289)
308 KOG1199 Short-chain alcohol de 95.5 0.029 6.3E-07 44.3 5.1 72 1-78 13-91 (260)
309 KOG1478 3-keto sterol reductas 95.5 0.0096 2.1E-07 49.8 2.5 77 1-78 7-97 (341)
310 PRK14874 aspartate-semialdehyd 95.3 0.03 6.5E-07 49.2 5.2 63 1-78 5-71 (334)
311 PLN02968 Probable N-acetyl-gam 95.3 0.018 4E-07 51.4 3.8 33 1-37 42-74 (381)
312 KOG3019 Predicted nucleoside-d 95.2 0.87 1.9E-05 37.8 12.6 35 3-38 18-57 (315)
313 PRK14982 acyl-ACP reductase; P 95.1 0.017 3.7E-07 50.7 2.9 64 1-78 159-223 (340)
314 PF01118 Semialdhyde_dh: Semia 95.1 0.03 6.6E-07 41.5 3.9 32 1-36 3-35 (121)
315 KOG2733 Uncharacterized membra 94.5 0.061 1.3E-06 47.1 4.7 72 1-78 9-91 (423)
316 TIGR01296 asd_B aspartate-semi 94.4 0.054 1.2E-06 47.7 4.4 63 1-78 3-69 (339)
317 PRK09496 trkA potassium transp 93.9 0.035 7.5E-07 50.5 2.2 60 1-67 4-66 (453)
318 PLN00106 malate dehydrogenase 93.5 0.15 3.2E-06 44.6 5.3 68 1-78 22-94 (323)
319 TIGR01758 MDH_euk_cyt malate d 93.5 0.18 3.8E-06 44.2 5.8 52 1-58 3-56 (324)
320 PF02254 TrkA_N: TrkA-N domain 93.5 0.021 4.6E-07 41.6 0.0 56 1-63 2-58 (116)
321 TIGR01915 npdG NADPH-dependent 93.5 0.082 1.8E-06 43.4 3.5 31 2-37 5-35 (219)
322 cd00704 MDH Malate dehydrogena 93.3 0.16 3.5E-06 44.4 5.2 68 1-78 4-84 (323)
323 TIGR01850 argC N-acetyl-gamma- 93.0 0.16 3.4E-06 44.9 4.7 31 1-35 4-35 (346)
324 KOG4288 Predicted oxidoreducta 92.8 0.094 2E-06 43.4 2.7 60 2-67 7-72 (283)
325 PRK05086 malate dehydrogenase; 92.6 0.3 6.5E-06 42.5 5.9 35 1-37 4-38 (312)
326 PF04127 DFP: DNA / pantothena 92.6 0.3 6.6E-06 39.2 5.4 64 5-78 27-90 (185)
327 COG2085 Predicted dinucleotide 92.5 0.14 3.1E-06 41.7 3.4 31 2-37 5-35 (211)
328 PTZ00325 malate dehydrogenase; 92.0 0.4 8.7E-06 41.9 5.9 70 1-78 12-84 (321)
329 COG0569 TrkA K+ transport syst 92.0 0.12 2.6E-06 42.8 2.5 55 3-63 5-62 (225)
330 TIGR01142 purT phosphoribosylg 92.0 0.45 9.8E-06 42.2 6.4 65 1-75 3-67 (380)
331 PLN02383 aspartate semialdehyd 91.5 0.38 8.2E-06 42.5 5.3 28 1-33 11-41 (344)
332 PRK08664 aspartate-semialdehyd 91.4 0.2 4.4E-06 44.2 3.5 32 1-36 7-38 (349)
333 COG3268 Uncharacterized conser 91.2 0.13 2.9E-06 44.7 2.0 68 1-78 10-79 (382)
334 PRK00436 argC N-acetyl-gamma-g 90.9 0.27 5.8E-06 43.4 3.8 31 1-35 6-36 (343)
335 PRK10669 putative cation:proto 90.9 0.13 2.7E-06 48.4 1.7 55 2-63 422-477 (558)
336 KOG1198 Zinc-binding oxidoredu 90.7 0.37 8E-06 42.6 4.4 71 1-78 162-233 (347)
337 PRK09496 trkA potassium transp 90.4 0.23 5E-06 45.1 3.0 56 1-63 235-293 (453)
338 PRK06019 phosphoribosylaminoim 90.0 0.71 1.5E-05 41.1 5.7 60 1-68 6-65 (372)
339 PF00070 Pyr_redox: Pyridine n 89.9 0.39 8.5E-06 32.5 3.1 30 2-37 4-33 (80)
340 PRK14106 murD UDP-N-acetylmura 89.8 0.26 5.6E-06 44.8 2.8 49 1-56 9-63 (450)
341 PRK09288 purT phosphoribosylgl 89.6 0.84 1.8E-05 40.7 5.9 65 1-75 16-80 (395)
342 PRK11199 tyrA bifunctional cho 89.6 0.3 6.4E-06 43.6 2.9 31 1-36 102-132 (374)
343 PRK08655 prephenate dehydrogen 89.2 0.36 7.9E-06 44.0 3.2 32 1-37 4-35 (437)
344 PLN02819 lysine-ketoglutarate 89.1 0.44 9.6E-06 47.9 4.0 61 1-67 573-649 (1042)
345 TIGR00978 asd_EA aspartate-sem 88.4 0.46 1E-05 41.8 3.3 30 1-35 4-34 (341)
346 PRK04148 hypothetical protein; 88.3 0.18 4E-06 38.2 0.6 49 2-58 22-71 (134)
347 TIGR01161 purK phosphoribosyla 88.2 1.3 2.7E-05 39.0 5.9 60 1-68 3-62 (352)
348 PRK06598 aspartate-semialdehyd 88.1 1.3 2.8E-05 39.4 5.9 30 2-35 6-38 (369)
349 PRK06129 3-hydroxyacyl-CoA deh 88.0 0.47 1E-05 41.0 3.1 29 2-36 7-35 (308)
350 PRK05671 aspartate-semialdehyd 87.9 0.37 8.1E-06 42.4 2.4 29 1-34 8-39 (336)
351 PF01113 DapB_N: Dihydrodipico 86.5 0.92 2E-05 33.7 3.5 32 1-36 4-36 (124)
352 PF01488 Shikimate_DH: Shikima 86.3 0.58 1.3E-05 35.3 2.4 31 1-37 16-47 (135)
353 cd08259 Zn_ADH5 Alcohol dehydr 86.0 0.67 1.5E-05 39.7 2.9 32 1-37 167-198 (332)
354 PRK00258 aroE shikimate 5-dehy 85.2 0.84 1.8E-05 38.9 3.1 31 1-37 127-158 (278)
355 PRK12409 D-amino acid dehydrog 84.7 0.93 2E-05 40.6 3.3 30 1-36 5-34 (410)
356 PRK08057 cobalt-precorrin-6x r 84.4 4.1 8.9E-05 34.3 6.8 68 1-78 6-73 (248)
357 PF02737 3HCDH_N: 3-hydroxyacy 84.4 0.81 1.8E-05 36.4 2.5 30 2-37 4-33 (180)
358 PRK11259 solA N-methyltryptoph 84.0 1.1 2.4E-05 39.4 3.4 31 1-37 7-37 (376)
359 PRK11863 N-acetyl-gamma-glutam 83.9 1.5 3.2E-05 38.2 4.0 31 2-36 7-37 (313)
360 cd05294 LDH-like_MDH_nadp A la 83.7 1.2 2.6E-05 38.6 3.4 31 1-36 4-36 (309)
361 cd01065 NAD_bind_Shikimate_DH 83.6 1 2.3E-05 34.3 2.7 31 1-37 23-54 (155)
362 smart00859 Semialdhyde_dh Semi 83.6 1.6 3.5E-05 32.0 3.7 31 1-35 3-34 (122)
363 PRK06444 prephenate dehydrogen 83.5 0.92 2E-05 36.8 2.5 25 1-30 4-28 (197)
364 PF00056 Ldh_1_N: lactate/mala 83.0 1.5 3.3E-05 33.4 3.4 32 2-36 5-36 (141)
365 TIGR00507 aroE shikimate 5-deh 82.9 1.2 2.5E-05 37.9 2.9 31 1-37 121-151 (270)
366 cd01080 NAD_bind_m-THF_DH_Cycl 82.7 1.4 3.1E-05 34.7 3.2 30 1-35 48-77 (168)
367 PRK06849 hypothetical protein; 82.7 1.3 2.8E-05 39.5 3.4 32 1-37 8-39 (389)
368 cd08295 double_bond_reductase_ 82.4 1.2 2.6E-05 38.6 3.0 32 1-37 156-187 (338)
369 PRK03562 glutathione-regulated 82.4 0.75 1.6E-05 43.9 1.8 55 2-63 405-460 (621)
370 PF02670 DXP_reductoisom: 1-de 82.3 1.6 3.4E-05 32.9 3.1 32 1-35 2-33 (129)
371 PF02558 ApbA: Ketopantoate re 81.7 1.4 3.1E-05 33.4 2.8 30 1-36 2-31 (151)
372 PF13450 NAD_binding_8: NAD(P) 81.5 2.2 4.8E-05 28.1 3.3 30 2-37 1-30 (68)
373 PRK10537 voltage-gated potassi 81.3 2.7 5.7E-05 37.9 4.8 54 2-63 245-298 (393)
374 COG0287 TyrA Prephenate dehydr 81.3 1.3 2.8E-05 37.9 2.7 31 2-37 7-37 (279)
375 COG0026 PurK Phosphoribosylami 80.8 4.9 0.00011 35.7 6.0 59 2-68 6-64 (375)
376 PRK08040 putative semialdehyde 80.8 2.2 4.7E-05 37.6 4.0 29 2-35 9-40 (336)
377 PF01266 DAO: FAD dependent ox 80.7 1.5 3.2E-05 37.7 2.9 30 1-36 3-32 (358)
378 PRK13982 bifunctional SbtC-lik 80.6 4.5 9.8E-05 37.3 6.0 63 5-78 280-342 (475)
379 KOG0023 Alcohol dehydrogenase, 80.5 2.3 4.9E-05 37.1 3.8 61 2-69 187-249 (360)
380 cd01075 NAD_bind_Leu_Phe_Val_D 80.3 1.7 3.8E-05 35.1 3.0 31 1-37 32-62 (200)
381 PLN02520 bifunctional 3-dehydr 80.2 1.6 3.4E-05 40.9 3.1 31 1-37 383-413 (529)
382 PRK00711 D-amino acid dehydrog 79.6 1.9 4.2E-05 38.5 3.4 30 1-36 4-33 (416)
383 PRK02472 murD UDP-N-acetylmura 79.4 1.6 3.5E-05 39.6 2.8 30 1-36 9-38 (447)
384 PRK14192 bifunctional 5,10-met 79.3 2 4.3E-05 36.9 3.1 30 1-35 163-192 (283)
385 COG0027 PurT Formate-dependent 79.2 3.7 8.1E-05 35.7 4.7 61 5-75 19-80 (394)
386 PRK03659 glutathione-regulated 79.2 1.2 2.6E-05 42.3 2.0 54 4-63 406-460 (601)
387 PRK00048 dihydrodipicolinate r 78.9 2.7 5.9E-05 35.4 3.8 31 1-35 5-35 (257)
388 TIGR01377 soxA_mon sarcosine o 78.8 2.1 4.6E-05 37.6 3.4 31 1-37 4-34 (380)
389 PRK09260 3-hydroxybutyryl-CoA 78.7 1.9 4E-05 36.9 2.8 30 2-37 6-35 (288)
390 KOG4022 Dihydropteridine reduc 78.7 6.6 0.00014 31.0 5.5 32 1-37 7-38 (236)
391 PRK07417 arogenate dehydrogena 78.6 2 4.4E-05 36.5 3.0 30 2-37 5-34 (279)
392 PRK06522 2-dehydropantoate 2-r 78.4 2.1 4.6E-05 36.5 3.1 31 1-37 4-34 (304)
393 TIGR02825 B4_12hDH leukotriene 78.3 2.2 4.8E-05 36.7 3.2 32 1-37 143-174 (325)
394 TIGR00877 purD phosphoribosyla 78.3 3 6.5E-05 37.6 4.2 66 1-75 4-69 (423)
395 PF03446 NAD_binding_2: NAD bi 78.3 1.7 3.6E-05 33.8 2.2 30 2-37 6-35 (163)
396 COG0136 Asd Aspartate-semialde 78.3 3.4 7.3E-05 36.2 4.3 17 2-18 6-22 (334)
397 TIGR01745 asd_gamma aspartate- 78.2 5.1 0.00011 35.7 5.5 17 2-18 5-21 (366)
398 COG0604 Qor NADPH:quinone redu 78.2 1.7 3.8E-05 37.9 2.6 31 1-36 147-177 (326)
399 cd08294 leukotriene_B4_DH_like 78.2 2 4.3E-05 36.8 2.9 32 1-37 148-179 (329)
400 TIGR01851 argC_other N-acetyl- 78.1 2.8 6.1E-05 36.4 3.7 29 1-33 5-33 (310)
401 PF10727 Rossmann-like: Rossma 78.0 1.3 2.7E-05 33.3 1.4 29 2-36 15-44 (127)
402 PRK08818 prephenate dehydrogen 78.0 2.2 4.7E-05 38.1 3.1 32 1-36 8-39 (370)
403 TIGR03364 HpnW_proposed FAD de 77.7 2.4 5.1E-05 37.2 3.3 31 1-37 4-34 (365)
404 cd08293 PTGR2 Prostaglandin re 77.3 2.1 4.5E-05 37.1 2.8 32 1-37 159-191 (345)
405 PRK14194 bifunctional 5,10-met 77.2 2.8 6.2E-05 36.3 3.5 31 1-36 163-193 (301)
406 PRK15469 ghrA bifunctional gly 76.8 7 0.00015 34.0 5.9 50 5-68 143-192 (312)
407 PRK07819 3-hydroxybutyryl-CoA 76.8 2.6 5.6E-05 36.1 3.2 30 2-37 10-39 (286)
408 PRK06035 3-hydroxyacyl-CoA deh 76.7 2.5 5.5E-05 36.1 3.1 30 2-37 8-37 (291)
409 cd01338 MDH_choloroplast_like 76.6 4.2 9E-05 35.6 4.4 30 2-36 7-43 (322)
410 TIGR02853 spore_dpaA dipicolin 76.5 2.4 5.2E-05 36.4 2.9 31 1-37 155-185 (287)
411 PRK06718 precorrin-2 dehydroge 76.4 2.7 5.9E-05 34.1 3.1 30 1-36 14-43 (202)
412 PRK06249 2-dehydropantoate 2-r 76.2 2.8 6E-05 36.3 3.3 30 1-36 9-38 (313)
413 PF03721 UDPG_MGDP_dh_N: UDP-g 76.2 2.1 4.5E-05 34.3 2.3 30 2-37 5-34 (185)
414 PF00479 G6PD_N: Glucose-6-pho 76.1 2.3 4.9E-05 34.1 2.5 62 1-63 1-90 (183)
415 PRK07688 thiamine/molybdopteri 75.8 4.2 9.1E-05 35.8 4.3 30 1-36 28-58 (339)
416 PRK14188 bifunctional 5,10-met 75.6 2.9 6.3E-05 36.1 3.1 30 1-35 162-192 (296)
417 PF01210 NAD_Gly3P_dh_N: NAD-d 75.6 2.8 6E-05 32.4 2.8 29 2-36 4-32 (157)
418 PRK11728 hydroxyglutarate oxid 75.5 2.8 6E-05 37.4 3.2 30 1-36 6-37 (393)
419 PLN02545 3-hydroxybutyryl-CoA 75.3 2.9 6.2E-05 35.8 3.1 30 2-37 9-38 (295)
420 COG0289 DapB Dihydrodipicolina 75.3 9.3 0.0002 32.4 5.9 33 1-37 6-39 (266)
421 PRK07066 3-hydroxybutyryl-CoA 75.1 3.2 6.9E-05 36.3 3.3 30 2-37 12-41 (321)
422 PLN03154 putative allyl alcoho 75.0 2.9 6.3E-05 36.6 3.1 31 1-36 163-193 (348)
423 PRK06719 precorrin-2 dehydroge 75.0 3.4 7.3E-05 32.1 3.1 28 1-34 17-44 (157)
424 TIGR00518 alaDH alanine dehydr 74.9 2.4 5.3E-05 37.8 2.6 67 1-78 171-238 (370)
425 PF01494 FAD_binding_3: FAD bi 74.1 3.2 7E-05 35.6 3.2 32 1-38 5-36 (356)
426 COG0163 UbiX 3-polyprenyl-4-hy 74.0 3.9 8.4E-05 32.7 3.2 28 2-34 9-37 (191)
427 PF03807 F420_oxidored: NADP o 74.0 3 6.5E-05 28.9 2.4 30 2-37 4-37 (96)
428 TIGR02130 dapB_plant dihydrodi 73.9 9.8 0.00021 32.5 5.8 27 1-32 4-30 (275)
429 PRK08293 3-hydroxybutyryl-CoA 73.7 3.6 7.8E-05 35.1 3.3 30 2-37 8-37 (287)
430 cd05276 p53_inducible_oxidored 73.2 3.4 7.4E-05 34.7 3.0 31 1-36 144-174 (323)
431 KOG1496 Malate dehydrogenase [ 73.2 3.3 7.2E-05 34.7 2.7 18 1-18 8-25 (332)
432 TIGR01772 MDH_euk_gproteo mala 73.0 4.4 9.6E-05 35.3 3.7 31 1-36 3-35 (312)
433 PRK12815 carB carbamoyl phosph 72.8 8.2 0.00018 39.4 6.0 67 1-75 11-87 (1068)
434 PRK14175 bifunctional 5,10-met 72.8 4.1 8.9E-05 35.0 3.4 30 1-35 162-191 (286)
435 cd08268 MDR2 Medium chain dehy 72.8 3.2 6.9E-05 35.1 2.7 31 1-36 149-179 (328)
436 PRK01747 mnmC bifunctional tRN 72.8 3.4 7.4E-05 39.7 3.2 30 1-36 264-293 (662)
437 PF12076 Wax2_C: WAX2 C-termin 72.7 3.6 7.8E-05 32.0 2.7 29 1-34 2-30 (164)
438 PLN02948 phosphoribosylaminoim 72.3 9.8 0.00021 36.1 6.1 59 2-68 27-85 (577)
439 PRK07364 2-octaprenyl-6-methox 72.2 4.3 9.3E-05 36.3 3.5 31 1-37 22-52 (415)
440 PF02826 2-Hacid_dh_C: D-isome 72.1 4.2 9E-05 32.1 3.1 30 2-37 41-70 (178)
441 PRK06728 aspartate-semialdehyd 71.9 4.2 9.1E-05 36.0 3.3 29 2-34 10-41 (347)
442 cd08289 MDR_yhfp_like Yhfp put 71.9 3.8 8.3E-05 35.0 3.1 32 1-37 151-182 (326)
443 PRK14619 NAD(P)H-dependent gly 71.9 3.9 8.6E-05 35.3 3.1 30 2-37 9-38 (308)
444 PRK06130 3-hydroxybutyryl-CoA 71.9 4.2 9.1E-05 35.0 3.3 29 2-36 9-37 (311)
445 PRK07530 3-hydroxybutyryl-CoA 71.8 3.9 8.6E-05 34.9 3.1 30 2-37 9-38 (292)
446 PF13478 XdhC_C: XdhC Rossmann 71.6 4.1 8.9E-05 30.9 2.8 30 2-37 3-32 (136)
447 TIGR01988 Ubi-OHases Ubiquinon 71.5 4.9 0.00011 35.3 3.7 32 1-38 3-34 (385)
448 PLN02256 arogenate dehydrogena 71.1 5.2 0.00011 34.7 3.7 29 2-36 41-69 (304)
449 PRK00094 gpsA NAD(P)H-dependen 71.1 4.3 9.3E-05 35.0 3.2 29 2-36 6-34 (325)
450 cd08253 zeta_crystallin Zeta-c 71.0 3.9 8.5E-05 34.4 2.9 31 1-36 149-179 (325)
451 PF13241 NAD_binding_7: Putati 70.9 6.3 0.00014 28.1 3.5 30 1-36 11-40 (103)
452 cd01337 MDH_glyoxysomal_mitoch 70.7 5.4 0.00012 34.7 3.7 30 1-35 4-35 (310)
453 COG0562 Glf UDP-galactopyranos 70.6 4.7 0.0001 35.3 3.2 31 1-37 5-35 (374)
454 PLN02735 carbamoyl-phosphate s 70.5 11 0.00024 38.6 6.3 68 1-76 27-104 (1102)
455 KOG1298 Squalene monooxygenase 70.4 4.7 0.0001 36.2 3.2 44 2-59 50-93 (509)
456 PRK14618 NAD(P)H-dependent gly 70.3 4.3 9.4E-05 35.3 3.1 30 2-37 9-38 (328)
457 PRK11188 rrmJ 23S rRNA methylt 70.3 20 0.00044 29.0 6.9 62 5-76 61-123 (209)
458 KOG0172 Lysine-ketoglutarate r 70.3 4 8.7E-05 36.5 2.8 63 1-69 6-71 (445)
459 PRK12921 2-dehydropantoate 2-r 70.2 4 8.6E-05 34.9 2.8 27 2-34 5-31 (305)
460 PRK12767 carbamoyl phosphate s 70.1 8.2 0.00018 33.3 4.7 30 1-37 5-36 (326)
461 PRK11101 glpA sn-glycerol-3-ph 69.8 4.6 0.0001 37.9 3.3 30 1-36 10-39 (546)
462 PRK05808 3-hydroxybutyryl-CoA 69.8 4.2 9.1E-05 34.6 2.8 30 2-37 8-37 (282)
463 PRK08306 dipicolinate synthase 69.8 4.5 9.8E-05 34.9 3.0 31 1-37 156-186 (296)
464 TIGR01505 tartro_sem_red 2-hyd 69.7 3.8 8.2E-05 35.0 2.5 30 2-37 4-33 (291)
465 TIGR01984 UbiH 2-polyprenyl-6- 69.7 5.7 0.00012 34.9 3.8 32 1-38 3-35 (382)
466 cd05188 MDR Medium chain reduc 69.3 3.8 8.2E-05 33.6 2.4 30 1-36 139-168 (271)
467 TIGR02824 quinone_pig3 putativ 69.1 4.6 9.9E-05 34.1 2.9 32 1-37 144-175 (325)
468 TIGR01692 HIBADH 3-hydroxyisob 69.1 4.6 0.0001 34.5 2.9 28 5-37 3-30 (288)
469 PRK07531 bifunctional 3-hydrox 68.6 5.2 0.00011 37.1 3.3 30 2-37 9-38 (495)
470 cd05191 NAD_bind_amino_acid_DH 68.6 5.9 0.00013 27.1 2.9 28 1-34 27-55 (86)
471 COG0623 FabI Enoyl-[acyl-carri 68.3 7.2 0.00016 32.5 3.7 70 7-81 18-95 (259)
472 cd08266 Zn_ADH_like1 Alcohol d 68.2 4.9 0.00011 34.2 2.9 31 1-36 171-201 (342)
473 PRK14620 NAD(P)H-dependent gly 68.0 6 0.00013 34.3 3.5 29 2-36 5-33 (326)
474 cd05288 PGDH Prostaglandin deh 67.8 4.7 0.0001 34.5 2.7 31 1-36 150-180 (329)
475 cd08250 Mgc45594_like Mgc45594 67.8 5 0.00011 34.3 2.9 32 1-37 144-175 (329)
476 PRK05442 malate dehydrogenase; 67.6 7 0.00015 34.2 3.8 30 2-36 9-45 (326)
477 PRK09310 aroDE bifunctional 3- 67.6 5.4 0.00012 36.9 3.2 31 1-37 336-366 (477)
478 PRK08261 fabG 3-ketoacyl-(acyl 67.6 11 0.00025 34.1 5.3 50 2-57 43-93 (450)
479 cd00650 LDH_MDH_like NAD-depen 67.6 7.2 0.00016 32.8 3.8 32 1-37 2-37 (263)
480 COG0002 ArgC Acetylglutamate s 67.6 6.3 0.00014 34.7 3.4 31 1-35 6-36 (349)
481 PRK08773 2-octaprenyl-3-methyl 67.5 6.9 0.00015 34.7 3.8 31 1-37 10-40 (392)
482 PRK08013 oxidoreductase; Provi 67.5 6.4 0.00014 35.2 3.6 31 1-37 7-37 (400)
483 PLN02775 Probable dihydrodipic 67.0 19 0.0004 31.0 6.1 31 1-36 15-46 (286)
484 PRK05714 2-octaprenyl-3-methyl 66.7 6.3 0.00014 35.2 3.4 30 1-36 6-35 (405)
485 cd08244 MDR_enoyl_red Possible 66.6 5.6 0.00012 33.8 3.0 32 1-37 147-178 (324)
486 KOG2013 SMT3/SUMO-activating c 66.5 9.4 0.0002 35.2 4.3 31 1-37 16-47 (603)
487 TIGR01759 MalateDH-SF1 malate 66.4 7.9 0.00017 33.9 3.8 30 2-36 8-44 (323)
488 TIGR02032 GG-red-SF geranylger 66.3 7.2 0.00016 32.6 3.5 31 1-37 4-34 (295)
489 cd05280 MDR_yhdh_yhfp Yhdh and 66.1 5.9 0.00013 33.7 3.0 32 1-37 151-182 (325)
490 PRK11064 wecC UDP-N-acetyl-D-m 65.8 5.6 0.00012 36.0 2.9 30 2-37 8-37 (415)
491 TIGR01035 hemA glutamyl-tRNA r 65.6 5.6 0.00012 36.1 2.8 31 1-37 184-215 (417)
492 TIGR03026 NDP-sugDHase nucleot 65.6 5.5 0.00012 35.9 2.8 30 2-37 5-34 (411)
493 PRK08268 3-hydroxy-acyl-CoA de 65.1 6.2 0.00013 36.8 3.1 30 2-37 12-41 (507)
494 PRK07494 2-octaprenyl-6-methox 65.1 8.1 0.00018 34.1 3.8 31 1-37 11-41 (388)
495 PRK15461 NADH-dependent gamma- 65.1 5.8 0.00013 34.1 2.8 30 2-37 6-35 (296)
496 cd05291 HicDH_like L-2-hydroxy 64.6 8.6 0.00019 33.2 3.7 30 2-37 5-36 (306)
497 TIGR01373 soxB sarcosine oxida 64.5 6.3 0.00014 35.1 3.0 31 1-37 34-66 (407)
498 cd08243 quinone_oxidoreductase 64.5 6.5 0.00014 33.2 3.0 32 1-37 147-178 (320)
499 PRK07236 hypothetical protein; 64.4 6.7 0.00015 34.8 3.1 31 1-37 10-40 (386)
500 PRK08229 2-dehydropantoate 2-r 64.2 5.8 0.00013 34.5 2.7 29 2-36 7-35 (341)
No 1
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.81 E-value=6.4e-19 Score=154.95 Aligned_cols=119 Identities=15% Similarity=0.027 Sum_probs=83.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--C----------CCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--F----------PSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~----------~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
||||||||||++|+++|+ .+||+|++++|.+.... . ...+++ ++.+|++|.+.+.+++++
T Consensus 19 lVtGatGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~~~~~-- 90 (348)
T PRK15181 19 LITGVAGFIGSGLLEELL-----FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI-FIQGDIRKFTDCQKACKN-- 90 (348)
T ss_pred EEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCcchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHHhhC--
Confidence 699999999999999999 78999999998643210 0 013578 899999999988888875
Q ss_pred CcceEEEccc---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcch
Q 048469 69 NEITHVHDPA---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFY 103 (239)
Q Consensus 69 ~~v~~v~~~a---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y 103 (239)
+++|+|+| +||. ....|..|+++..| .+.|
T Consensus 91 --~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~--~~~~~~~e~~~~~p-~~~Y 165 (348)
T PRK15181 91 --VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGD--HPDLPKIEERIGRP-LSPY 165 (348)
T ss_pred --CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCC--CCCCCCCCCCCCCC-CChh
Confidence 45666654 2331 12345567665432 2344
Q ss_pred H----HHHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 104 C----ALEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 104 ~----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
. ..|.++.. ...+++++++||++||||+.
T Consensus 166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 3 34555443 45689999999999999964
No 2
>PLN02214 cinnamoyl-CoA reductase
Probab=99.81 E-value=7.4e-19 Score=154.26 Aligned_cols=218 Identities=13% Similarity=0.085 Sum_probs=126.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
||||||||||++|+++|+ ++||+|++++|+..... . ...+++ ++.+|++|++++.++++++ +
T Consensus 14 lVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~----d 83 (342)
T PLN02214 14 CVTGAGGYIASWIVKILL-----ERGYTVKGTVRNPDDPKNTHLRELEGGKERLI-LCKADLQDYEALKAAIDGC----D 83 (342)
T ss_pred EEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCchhhhHHHHHHhhCCCCcEE-EEecCcCChHHHHHHHhcC----C
Confidence 699999999999999999 89999999999754210 0 113578 8999999999999999864 4
Q ss_pred EEEccc-----------------------------------------cccCCC-CCCCCCCCCCCC-----CCCCcchH-
Q 048469 73 HVHDPA-----------------------------------------HSAHAN-SHDPPLREDLSR-----LPCQNFYC- 104 (239)
Q Consensus 73 ~v~~~a-----------------------------------------~yg~~~-~~~~p~~E~~~~-----~~~~~~y~- 104 (239)
+|||+| .||... ....+++|+++. ..+.+.|.
T Consensus 84 ~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~ 163 (342)
T PLN02214 84 GVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCY 163 (342)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHH
Confidence 555554 122100 011246777521 11123342
Q ss_pred ---HHHHHHHh--cCCCceEEEeccCceeccCCCcccc----HHHHHH------------------HHHHHhC--CCCCC
Q 048469 105 ---ALEDLVAS--YMPVISYSIHRSSIIIGSSSRSVYN----SLLTLD------------------VICKVFG--VEFVP 155 (239)
Q Consensus 105 ---~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~~~~~----~~~~l~------------------~ia~~~g--~~~~~ 155 (239)
..|+++.+ +..+++++++||+.||||+.....+ .+..+. |+|+++- ++...
T Consensus 164 sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~ 243 (342)
T PLN02214 164 GKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243 (342)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc
Confidence 34555554 4568999999999999997532111 111110 5555542 22111
Q ss_pred CCCCCCCCHHhhcCcchHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHHHcCCCCccchHHHHHHHH
Q 048469 156 FDENDDFDFVGMMKPKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSREFGFFKFADTLKSLGMWV 235 (239)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar~lG~~~~~~~~~~~~~~~ 235 (239)
.+..+++...-....++.+.+.+.++-.+ .+.. .. ...........+|++|+++|||++ ++.++++.+++
T Consensus 244 --~~g~yn~~~~~~~~~el~~~i~~~~~~~~-~~~~-~~-----~~~~~~~~~~~~d~~k~~~LG~~p-~~lee~i~~~~ 313 (342)
T PLN02214 244 --ASGRYLLAESARHRGEVVEILAKLFPEYP-LPTK-CK-----DEKNPRAKPYKFTNQKIKDLGLEF-TSTKQSLYDTV 313 (342)
T ss_pred --cCCcEEEecCCCCHHHHHHHHHHHCCCCC-CCCC-Cc-----cccCCCCCccccCcHHHHHcCCcc-cCHHHHHHHHH
Confidence 12334332111122334444444443111 0000 00 000001123468999999999986 79999999998
Q ss_pred HHh
Q 048469 236 TKL 238 (239)
Q Consensus 236 ~~~ 238 (239)
+.+
T Consensus 314 ~~~ 316 (342)
T PLN02214 314 KSL 316 (342)
T ss_pred HHH
Confidence 876
No 3
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.80 E-value=1.7e-18 Score=150.51 Aligned_cols=220 Identities=14% Similarity=0.100 Sum_probs=127.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------F--PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
|||||+||||++|+++|+ .+||+|++++|++.... . ...+++ ++.+|++|.+++.+++++ +
T Consensus 9 lVtG~~G~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~ 78 (325)
T PLN02989 9 CVTGASGYIASWIVKLLL-----FRGYTINATVRDPKDRKKTDHLLALDGAKERLK-LFKADLLDEGSFELAIDG----C 78 (325)
T ss_pred EEECCchHHHHHHHHHHH-----HCCCEEEEEEcCCcchhhHHHHHhccCCCCceE-EEeCCCCCchHHHHHHcC----C
Confidence 699999999999999999 88999999988764211 0 113678 899999999999988875 4
Q ss_pred eEEEccc----------------------------------------------cccCCC---CCCCCCCCCCCCCCC---
Q 048469 72 THVHDPA----------------------------------------------HSAHAN---SHDPPLREDLSRLPC--- 99 (239)
Q Consensus 72 ~~v~~~a----------------------------------------------~yg~~~---~~~~p~~E~~~~~~~--- 99 (239)
|+|+|+| .|+... ....+++|+.+..|.
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~ 158 (325)
T PLN02989 79 ETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAE 158 (325)
T ss_pred CEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhc
Confidence 5666554 011000 012346777664321
Q ss_pred --CcchH----HHHHHHHh--cCCCceEEEeccCceeccCCCccccH----HHHH-----------------HHHHHHhC
Q 048469 100 --QNFYC----ALEDLVAS--YMPVISYSIHRSSIIIGSSSRSVYNS----LLTL-----------------DVICKVFG 150 (239)
Q Consensus 100 --~~~y~----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~~~~~~----~~~l-----------------~~ia~~~g 150 (239)
.+.|. ..|.++.. +..+++++++||+.+|||......++ +..+ .|+|+++-
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~ 238 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHV 238 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHH
Confidence 13343 34555544 45689999999999999975422111 1111 14444431
Q ss_pred --CCCCCCCCCCCCCHHhhcCcchHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHHHcCCCCccchH
Q 048469 151 --VEFVPFDENDDFDFVGMMKPKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSREFGFFKFADTL 228 (239)
Q Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar~lG~~~~~~~~ 228 (239)
++... .+..+++...-....++++.+.+..+... ... . . .+..-........|++|+++|||.++++.+
T Consensus 239 ~~l~~~~--~~~~~ni~~~~~s~~ei~~~i~~~~~~~~-~~~-~-~----~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~ 309 (325)
T PLN02989 239 KALETPS--ANGRYIIDGPVVTIKDIENVLREFFPDLC-IAD-R-N----EDITELNSVTFNVCLDKVKSLGIIEFTPTE 309 (325)
T ss_pred HHhcCcc--cCceEEEecCCCCHHHHHHHHHHHCCCCC-CCC-C-C----CCcccccccCcCCCHHHHHHcCCCCCCCHH
Confidence 11111 01122221111122234444444443111 000 0 0 000000012357899999999999999999
Q ss_pred HHHHHHHHHhC
Q 048469 229 KSLGMWVTKLR 239 (239)
Q Consensus 229 ~~~~~~~~~~~ 239 (239)
+++.++++++|
T Consensus 310 ~gi~~~~~~~~ 320 (325)
T PLN02989 310 TSLRDTVLSLK 320 (325)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 4
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=3.7e-18 Score=143.06 Aligned_cols=121 Identities=15% Similarity=0.018 Sum_probs=93.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
|||||+|+||+|.|.+|+ +.||+|++++.-..... .....++ ++.+|++|.+.+.+.++... ++.|+|.|
T Consensus 4 LVtGGAGYIGSHtv~~Ll-----~~G~~vvV~DNL~~g~~~~v~~~~~~-f~~gDi~D~~~L~~vf~~~~--idaViHFA 75 (329)
T COG1087 4 LVTGGAGYIGSHTVRQLL-----KTGHEVVVLDNLSNGHKIALLKLQFK-FYEGDLLDRALLTAVFEENK--IDAVVHFA 75 (329)
T ss_pred EEecCcchhHHHHHHHHH-----HCCCeEEEEecCCCCCHHHhhhccCc-eEEeccccHHHHHHHHHhcC--CCEEEECc
Confidence 799999999999999999 89999999988544321 1111267 99999999999999998765 77777655
Q ss_pred ---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----HHHHH
Q 048469 79 ---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----ALEDL 109 (239)
Q Consensus 79 ---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~~e~~ 109 (239)
+|| .+...|++|+.|.. +.|.|. ..|+.
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG--~p~~~PI~E~~~~~-p~NPYG~sKlm~E~i 152 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYG--EPTTSPISETSPLA-PINPYGRSKLMSEEI 152 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcC--CCCCcccCCCCCCC-CCCcchhHHHHHHHH
Confidence 355 34457999999865 446674 35666
Q ss_pred HHh--cCCCceEEEeccCceeccCC
Q 048469 110 VAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 110 l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
+.. +..+|+++++|-.++.|..+
T Consensus 153 L~d~~~a~~~~~v~LRYFN~aGA~~ 177 (329)
T COG1087 153 LRDAAKANPFKVVILRYFNVAGACP 177 (329)
T ss_pred HHHHHHhCCCcEEEEEecccccCCC
Confidence 665 56779999999999999754
No 5
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.80 E-value=2e-18 Score=147.64 Aligned_cols=219 Identities=17% Similarity=0.146 Sum_probs=128.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------F--PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
+|||||||||++|++.|+ .+||+|++..|++.... + ..++.+ .+.+||+|++++.+++.+++. |
T Consensus 10 cVTGAsGfIgswivk~LL-----~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~-l~~aDL~d~~sf~~ai~gcdg-V 82 (327)
T KOG1502|consen 10 CVTGASGFIGSWIVKLLL-----SRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLK-LFKADLLDEGSFDKAIDGCDG-V 82 (327)
T ss_pred EEeCCchHHHHHHHHHHH-----hCCCEEEEEEcCcchhhhHHHHHhcccCcccce-EEeccccccchHHHHHhCCCE-E
Confidence 599999999999999999 89999999999986421 1 245688 899999999999999998754 4
Q ss_pred eEEEccc-----------------------------------cc----c------CCCCCCCCCCCCCCCCC-----CCc
Q 048469 72 THVHDPA-----------------------------------HS----A------HANSHDPPLREDLSRLP-----CQN 101 (239)
Q Consensus 72 ~~v~~~a-----------------------------------~y----g------~~~~~~~p~~E~~~~~~-----~~~ 101 (239)
-|+..-. +| . ........++|+....+ ..+
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~ 162 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL 162 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence 4442111 11 0 11112235666654211 012
Q ss_pred chH----HHHHHHHh--cCCCceEEEeccCceeccCCCccccH----HHHHH------------------HHHHH--hCC
Q 048469 102 FYC----ALEDLVAS--YMPVISYSIHRSSIIIGSSSRSVYNS----LLTLD------------------VICKV--FGV 151 (239)
Q Consensus 102 ~y~----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~~~~~~----~~~l~------------------~ia~~--~g~ 151 (239)
+|. -+|+...+ ++++++.+++.|+.|+||......+. ...+. |+|.+ +.+
T Consensus 163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~ 242 (327)
T KOG1502|consen 163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLAL 242 (327)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHH
Confidence 232 24555444 56789999999999999976542222 11111 44443 333
Q ss_pred CCCCCCCCCCCCHHhhcCcchHHHHHHHHH----hCCCCCCCcccccchhhhhhhhccccccccChhHHHHcCCCCccch
Q 048469 152 EFVPFDENDDFDFVGMMKPKAKVWDEIAEQ----HGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSREFGFFKFADT 227 (239)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar~lG~~~~~~~ 227 (239)
+... .++++-.. .....|++|++. ++..+ ++.. ..+...+.-....+|.+|+++|||..+++.
T Consensus 243 E~~~--a~GRyic~----~~~~~~~ei~~~l~~~~P~~~---ip~~----~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l 309 (327)
T KOG1502|consen 243 EKPS--AKGRYICV----GEVVSIKEIADILRELFPDYP---IPKK----NAEEHEGFLTSFKVSSEKLKSLGGFKFRPL 309 (327)
T ss_pred cCcc--cCceEEEe----cCcccHHHHHHHHHHhCCCCC---CCCC----CCccccccccccccccHHHHhcccceecCh
Confidence 4322 12222111 111114433333 32221 1110 000000000012479999999997789999
Q ss_pred HHHHHHHHHHhC
Q 048469 228 LKSLGMWVTKLR 239 (239)
Q Consensus 228 ~~~~~~~~~~~~ 239 (239)
++++.++++.++
T Consensus 310 ~e~~~dt~~sl~ 321 (327)
T KOG1502|consen 310 EETLSDTVESLR 321 (327)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 6
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.79 E-value=3.2e-18 Score=147.59 Aligned_cols=110 Identities=16% Similarity=0.134 Sum_probs=78.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
|||||+||||++|+++|+ ..| +|++++|.. . .+.+|++|++.+.+++++.+ +|.|+|+|
T Consensus 4 LVtG~~GfiGs~l~~~L~-----~~g-~V~~~~~~~----------~-~~~~Dl~d~~~~~~~~~~~~--~D~Vih~Aa~ 64 (299)
T PRK09987 4 LLFGKTGQVGWELQRALA-----PLG-NLIALDVHS----------T-DYCGDFSNPEGVAETVRKIR--PDVIVNAAAH 64 (299)
T ss_pred EEECCCCHHHHHHHHHhh-----ccC-CEEEecccc----------c-cccCCCCCHHHHHHHHHhcC--CCEEEECCcc
Confidence 799999999999999999 778 799998853 1 44689999999999988653 67777765
Q ss_pred ------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----HHHHHHHh
Q 048469 79 ------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----ALEDLVAS 112 (239)
Q Consensus 79 ------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~~e~~l~~ 112 (239)
+|| +....|++|+++..| .+.|. ..|.++..
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~--~~~~~p~~E~~~~~P-~~~Yg~sK~~~E~~~~~ 141 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFP--GTGDIPWQETDATAP-LNVYGETKLAGEKALQE 141 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEEC--CCCCCCcCCCCCCCC-CCHHHHHHHHHHHHHHH
Confidence 222 122357889887543 24342 23444432
Q ss_pred cCCCceEEEeccCceeccCCCc
Q 048469 113 YMPVISYSIHRSSIIIGSSSRS 134 (239)
Q Consensus 113 ~~~~~~~~ilRp~~i~G~~~~~ 134 (239)
...+++|+||++|||++..+
T Consensus 142 --~~~~~~ilR~~~vyGp~~~~ 161 (299)
T PRK09987 142 --HCAKHLIFRTSWVYAGKGNN 161 (299)
T ss_pred --hCCCEEEEecceecCCCCCC
Confidence 34468999999999987544
No 7
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.78 E-value=9e-18 Score=145.56 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=53.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------F--PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
||||||||||++|+++|+ .+||+|++++|+..... . ..++++ ++.+|++|++.+.++++++
T Consensus 8 lVtGatGfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~---- 77 (322)
T PLN02662 8 CVTGASGYIASWLVKLLL-----QRGYTVKATVRDPNDPKKTEHLLALDGAKERLH-LFKANLLEEGSFDSVVDGC---- 77 (322)
T ss_pred EEECChHHHHHHHHHHHH-----HCCCEEEEEEcCCCchhhHHHHHhccCCCCceE-EEeccccCcchHHHHHcCC----
Confidence 699999999999999999 88999999999754210 0 124678 9999999999998888764
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
++|||+|
T Consensus 78 d~Vih~A 84 (322)
T PLN02662 78 EGVFHTA 84 (322)
T ss_pred CEEEEeC
Confidence 4454443
No 8
>PLN02427 UDP-apiose/xylose synthase
Probab=99.77 E-value=7.2e-18 Score=150.18 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=52.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC-CcEEEEEecCCCCCC-C-------CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG-PWEVYGSAWCPKQSW-F-------PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~~-~-------~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
||||||||||++|+++|+ ++ |++|++++|++.... + ...+++ ++.+|++|.+.+.++++++
T Consensus 18 lVTGgtGfIGs~lv~~L~-----~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~---- 87 (386)
T PLN02427 18 CMIGAGGFIGSHLCEKLM-----TETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQ-FHRINIKHDSRLEGLIKMA---- 87 (386)
T ss_pred EEECCcchHHHHHHHHHH-----hcCCCEEEEEecCchhhhhhhccccccCCCCeE-EEEcCCCChHHHHHHhhcC----
Confidence 699999999999999999 66 699999998753210 0 124689 9999999999999998864
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
++|||+|
T Consensus 88 d~ViHlA 94 (386)
T PLN02427 88 DLTINLA 94 (386)
T ss_pred CEEEEcc
Confidence 4555544
No 9
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.77 E-value=1.1e-17 Score=146.91 Aligned_cols=120 Identities=14% Similarity=0.236 Sum_probs=79.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC-CcEEEEEecCCCCC--CCCCCCceeeEeecCC-CchhHHHHHhcccCcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG-PWEVYGSAWCPKQS--WFPSSAVDHYITFDAT-NSGNTTEKLSLLFNEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~~Dl~-d~~~~~~~l~~~~~~v~~v~~ 76 (239)
||||||||||++|+++|+ .. ||+|++++|+.... ....++++ ++.+|++ +.+.+.+++++ +++|+|
T Consensus 5 lVtGatGfiGs~l~~~L~-----~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~----~d~ViH 74 (347)
T PRK11908 5 LILGVNGFIGHHLSKRIL-----ETTDWEVYGMDMQTDRLGDLVNHPRMH-FFEGDITINKEWIEYHVKK----CDVILP 74 (347)
T ss_pred EEECCCcHHHHHHHHHHH-----hCCCCeEEEEeCcHHHHHHhccCCCeE-EEeCCCCCCHHHHHHHHcC----CCEEEE
Confidence 699999999999999998 54 79999999865321 11235688 9999998 66777777765 455555
Q ss_pred cc--------------------------------------------cccCCCCCCCCCCCCCCCC---C--CCcchHH--
Q 048469 77 PA--------------------------------------------HSAHANSHDPPLREDLSRL---P--CQNFYCA-- 105 (239)
Q Consensus 77 ~a--------------------------------------------~yg~~~~~~~p~~E~~~~~---~--~~~~y~~-- 105 (239)
++ +||. ....++.|+.++. + .|...|.
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~--~~~~~~~ee~~~~~~~~~~~p~~~Y~~s 152 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM--CPDEEFDPEASPLVYGPINKPRWIYACS 152 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeecc--CCCcCcCccccccccCcCCCccchHHHH
Confidence 43 1221 1123456665321 1 1222343
Q ss_pred ---HHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 106 ---LEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 106 ---~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
.|.++.. ...+++++++||+.|||++.
T Consensus 153 K~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~ 184 (347)
T PRK11908 153 KQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGL 184 (347)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCc
Confidence 3444443 35789999999999999964
No 10
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.76 E-value=1.7e-17 Score=145.90 Aligned_cols=70 Identities=17% Similarity=0.078 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
||||||||||++|++.|+ +.|++|++++|+..... . ...+++ ++.+|++|++++.+++++.+ +|+|
T Consensus 8 lItGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~d~v 79 (349)
T TIGR02622 8 LVTGHTGFKGSWLSLWLL-----ELGAEVYGYSLDPPTSPNLFELLNLAKKIE-DHFGDIRDAAKLRKAIAEFK--PEIV 79 (349)
T ss_pred EEECCCChhHHHHHHHHH-----HCCCEEEEEeCCCccchhHHHHHhhcCCce-EEEccCCCHHHHHHHHhhcC--CCEE
Confidence 699999999999999999 88999999999764321 0 123577 89999999999999998764 7888
Q ss_pred Eccc
Q 048469 75 HDPA 78 (239)
Q Consensus 75 ~~~a 78 (239)
+|++
T Consensus 80 ih~A 83 (349)
T TIGR02622 80 FHLA 83 (349)
T ss_pred EECC
Confidence 8776
No 11
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.76 E-value=1.5e-17 Score=157.96 Aligned_cols=220 Identities=13% Similarity=0.061 Sum_probs=129.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC--CcEEEEEecCCCCC---C----CCCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG--PWEVYGSAWCPKQS---W----FPSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~---~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
||||||||||++|+++|+ .. +|+|++++|..... . ...++++ ++.+|++|++.+..++... . +
T Consensus 10 LVTGatGfIG~~lv~~Ll-----~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~~~~~~~~~~-~-~ 81 (668)
T PLN02260 10 LITGAAGFIASHVANRLI-----RNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK-FVKGDIASADLVNYLLITE-G-I 81 (668)
T ss_pred EEECCCcHHHHHHHHHHH-----HhCCCCEEEEEeCCCccchhhhhhhcccCCCeE-EEECCCCChHHHHHHHhhc-C-C
Confidence 699999999999999999 55 78999999853110 0 0134788 9999999998887776433 2 6
Q ss_pred eEEEccc----------------------------------------------cccCCCC-CCCCCCCCCCCCCCCcchH
Q 048469 72 THVHDPA----------------------------------------------HSAHANS-HDPPLREDLSRLPCQNFYC 104 (239)
Q Consensus 72 ~~v~~~a----------------------------------------------~yg~~~~-~~~p~~E~~~~~~~~~~y~ 104 (239)
|+|+|+| +||.... ...+..|+.+.. +.+.|.
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~-p~~~Y~ 160 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLL-PTNPYS 160 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCC-CCCCcH
Confidence 7777766 1221000 001234555533 234453
Q ss_pred ----HHHHHHHh--cCCCceEEEeccCceeccCCCc--cccHHHHHH----------------------HHHHHhCC--C
Q 048469 105 ----ALEDLVAS--YMPVISYSIHRSSIIIGSSSRS--VYNSLLTLD----------------------VICKVFGV--E 152 (239)
Q Consensus 105 ----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~~--~~~~~~~l~----------------------~ia~~~g~--~ 152 (239)
..|.++.+ ...+++++|+||+.|||+.... ....+...+ |+|+.+.. +
T Consensus 161 ~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~ 240 (668)
T PLN02260 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHh
Confidence 35666665 4568999999999999997531 111111111 55555421 1
Q ss_pred CCCCCCCCCCCHHhh-cCcchHHHHHHHHHhCCCCCCC-cccccchhhhhhhhccccccccChhHHHHcCCCCccchHHH
Q 048469 153 FVPFDENDDFDFVGM-MKPKAKVWDEIAEQHGLYNINK-LEEITCFEALINVLHFGFQHVCSMNKSREFGFFKFADTLKS 230 (239)
Q Consensus 153 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~gl~~~~~-~~~~~~~~~~d~~~~~~~~~~~d~~kar~lG~~~~~~~~~~ 230 (239)
... .+..+++... -....+..+.+.+..|..+ .. +......++. .....+|++|+++|||.+.++.++.
T Consensus 241 ~~~--~~~vyni~~~~~~s~~el~~~i~~~~g~~~-~~~i~~~~~~p~~------~~~~~~d~~k~~~lGw~p~~~~~eg 311 (668)
T PLN02260 241 KGE--VGHVYNIGTKKERRVIDVAKDICKLFGLDP-EKSIKFVENRPFN------DQRYFLDDQKLKKLGWQERTSWEEG 311 (668)
T ss_pred cCC--CCCEEEECCCCeeEHHHHHHHHHHHhCCCC-cceeeecCCCCCC------cceeecCHHHHHHcCCCCCCCHHHH
Confidence 111 1223333210 1122345556666677543 11 1110111111 1235689999999999999999999
Q ss_pred HHHHHHHh
Q 048469 231 LGMWVTKL 238 (239)
Q Consensus 231 ~~~~~~~~ 238 (239)
+.++++.+
T Consensus 312 l~~~i~w~ 319 (668)
T PLN02260 312 LKKTMEWY 319 (668)
T ss_pred HHHHHHHH
Confidence 99888765
No 12
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.76 E-value=1.8e-17 Score=150.18 Aligned_cols=70 Identities=14% Similarity=0.008 Sum_probs=54.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC---CCC-----C----------------CCCCceeeEeecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK---QSW-----F----------------PSSAVDHYITFDATN 56 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~---~~~-----~----------------~~~~v~~~~~~Dl~d 56 (239)
||||||||||++|+++|+ .+||+|++++|... ... . ...+++ ++.+|++|
T Consensus 51 LVTGatGfIGs~Lv~~L~-----~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-~v~~Dl~d 124 (442)
T PLN02572 51 MVIGGDGYCGWATALHLS-----KRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE-LYVGDICD 124 (442)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce-EEECCCCC
Confidence 699999999999999999 88999999865211 100 0 013588 99999999
Q ss_pred chhHHHHHhcccCcceEEEccc
Q 048469 57 SGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 57 ~~~~~~~l~~~~~~v~~v~~~a 78 (239)
++.+.+++++.+ +|+|||+|
T Consensus 125 ~~~v~~~l~~~~--~D~ViHlA 144 (442)
T PLN02572 125 FEFLSEAFKSFE--PDAVVHFG 144 (442)
T ss_pred HHHHHHHHHhCC--CCEEEECC
Confidence 999999998753 67777765
No 13
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.75 E-value=5.6e-17 Score=140.90 Aligned_cols=68 Identities=10% Similarity=0.018 Sum_probs=53.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C----CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F----PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
||||||||||++|+++|+ +.||+|+++.|+..... . ...+++ ++.+|++|++++.++++++
T Consensus 9 lVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~---- 78 (322)
T PLN02986 9 CVTGASGYIASWIVKLLL-----LRGYTVKATVRDLTDRKKTEHLLALDGAKERLK-LFKADLLEESSFEQAIEGC---- 78 (322)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEECCCcchHHHHHHHhccCCCCceE-EEecCCCCcchHHHHHhCC----
Confidence 699999999999999999 88999999999764210 0 124688 8999999999999998864
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
++|+|+|
T Consensus 79 d~vih~A 85 (322)
T PLN02986 79 DAVFHTA 85 (322)
T ss_pred CEEEEeC
Confidence 4555544
No 14
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.75 E-value=6.8e-17 Score=139.97 Aligned_cols=122 Identities=13% Similarity=0.048 Sum_probs=85.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc-
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a- 78 (239)
||||||||||++|+++|+ +.||+|++++|++.... ....+++ ++.+|++|++++.++++++ ++|+|++
T Consensus 4 lItG~~G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~~~~~----d~vi~~a~ 73 (328)
T TIGR03466 4 LVTGATGFVGSAVVRLLL-----EQGEEVRVLVRPTSDRRNLEGLDVE-IVEGDLRDPASLRKAVAGC----RALFHVAA 73 (328)
T ss_pred EEECCccchhHHHHHHHH-----HCCCEEEEEEecCccccccccCCce-EEEeeCCCHHHHHHHHhCC----CEEEEece
Confidence 699999999999999999 88999999999865321 1234688 9999999999999998765 3444433
Q ss_pred ------------------------------------------cccCCCCCCCCCCCCCCCCCCC--cchH----HHHHHH
Q 048469 79 ------------------------------------------HSAHANSHDPPLREDLSRLPCQ--NFYC----ALEDLV 110 (239)
Q Consensus 79 ------------------------------------------~yg~~~~~~~p~~E~~~~~~~~--~~y~----~~e~~l 110 (239)
.||. .....|.+|+.+..+.. ..|. ..|.++
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~-~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~ 152 (328)
T TIGR03466 74 DYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV-RGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA 152 (328)
T ss_pred ecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCc-CCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence 1221 01234677877643221 2232 345555
Q ss_pred Hh--cCCCceEEEeccCceeccCCC
Q 048469 111 AS--YMPVISYSIHRSSIIIGSSSR 133 (239)
Q Consensus 111 ~~--~~~~~~~~ilRp~~i~G~~~~ 133 (239)
.+ ...+++++++||+.+||++..
T Consensus 153 ~~~~~~~~~~~~ilR~~~~~G~~~~ 177 (328)
T TIGR03466 153 LEMAAEKGLPVVIVNPSTPIGPRDI 177 (328)
T ss_pred HHHHHhcCCCEEEEeCCccCCCCCC
Confidence 54 345899999999999998754
No 15
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.75 E-value=5.4e-17 Score=142.73 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=81.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecCCCCCC---C----CCCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWCPKQSW---F----PSSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~~---~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
||||||||||++|++.|+ .+|++|+++ .|...... . ...+++ ++.+|++|++++.+++++.. +|
T Consensus 5 lVtGatGfIG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~D 76 (355)
T PRK10217 5 LITGGAGFIGSALVRYII-----NETSDAVVVVDKLTYAGNLMSLAPVAQSERFA-FEKVDICDRAELARVFTEHQ--PD 76 (355)
T ss_pred EEEcCCcHHHHHHHHHHH-----HcCCCEEEEEecCccccchhhhhhcccCCceE-EEECCCcChHHHHHHHhhcC--CC
Confidence 699999999999999999 788875544 44321110 0 113577 88999999999999998643 77
Q ss_pred EEEccc-------------------------------cc---------c--CC---------C---CCCCCCCCCCCCCC
Q 048469 73 HVHDPA-------------------------------HS---------A--HA---------N---SHDPPLREDLSRLP 98 (239)
Q Consensus 73 ~v~~~a-------------------------------~y---------g--~~---------~---~~~~p~~E~~~~~~ 98 (239)
+|+|+| .+ + +. + ....|++|+.+..+
T Consensus 77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p 156 (355)
T PRK10217 77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAP 156 (355)
T ss_pred EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCC
Confidence 888776 01 1 00 0 00124667665332
Q ss_pred CCcchH----HHHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 99 CQNFYC----ALEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 99 ~~~~y~----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
.+.|. ..|.++.. +..+++++++||+.||||..
T Consensus 157 -~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 157 -SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred -CChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 23342 34555544 45689999999999999975
No 16
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.74 E-value=4.5e-17 Score=154.39 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=82.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCC-CCcEEEEEecCCCCC--CCCCCCceeeEeecCCCchh-HHHHHhcccCcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALG-GPWEVYGSAWCPKQS--WFPSSAVDHYITFDATNSGN-TTEKLSLLFNEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~-~g~~V~~l~R~~~~~--~~~~~~v~~~~~~Dl~d~~~-~~~~l~~~~~~v~~v~~ 76 (239)
||||||||||++|+++|+ . .||+|++++|.+... ....++++ ++.+|++|.++ +.++++++ ++|+|
T Consensus 319 LVTGatGFIGs~Lv~~Ll-----~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~gDl~d~~~~l~~~l~~~----D~ViH 388 (660)
T PRK08125 319 LILGVNGFIGNHLTERLL-----RDDNYEVYGLDIGSDAISRFLGHPRFH-FVEGDISIHSEWIEYHIKKC----DVVLP 388 (660)
T ss_pred EEECCCchHHHHHHHHHH-----hCCCcEEEEEeCCchhhhhhcCCCceE-EEeccccCcHHHHHHHhcCC----CEEEE
Confidence 699999999999999999 5 479999999976421 11234688 99999999765 56677654 45554
Q ss_pred cc--------------------------------------------cccCCCCCCCCCCCCCCCC---C--CC-cchH--
Q 048469 77 PA--------------------------------------------HSAHANSHDPPLREDLSRL---P--CQ-NFYC-- 104 (239)
Q Consensus 77 ~a--------------------------------------------~yg~~~~~~~p~~E~~~~~---~--~~-~~y~-- 104 (239)
+| +||. ....+++|+++.. + .| +.|.
T Consensus 389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~--~~~~~~~E~~~~~~~~p~~~p~s~Yg~s 466 (660)
T PRK08125 389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGM--CTDKYFDEDTSNLIVGPINKQRWIYSVS 466 (660)
T ss_pred CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCC--CCCCCcCccccccccCCCCCCccchHHH
Confidence 43 2331 1224677876531 1 12 2342
Q ss_pred --HHHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 105 --ALEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 105 --~~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
..|.++.. +..+++++++||++||||+.
T Consensus 467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 498 (660)
T PRK08125 467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRL 498 (660)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEceeeCCCc
Confidence 34555554 45689999999999999974
No 17
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.74 E-value=9.3e-17 Score=140.47 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=53.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CC-CCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FP-SSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~-~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
||||||||||++|+++|+ ..||+|+++.|++.... .. .++++ ++.+|++|++++.+++++ +|
T Consensus 13 lItG~~GfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d 82 (338)
T PLN00198 13 CVIGGTGFLASLLIKLLL-----QKGYAVNTTVRDPENQKKIAHLRALQELGDLK-IFGADLTDEESFEAPIAG----CD 82 (338)
T ss_pred EEECCchHHHHHHHHHHH-----HCCCEEEEEECCCCCHHHHHHHHhcCCCCceE-EEEcCCCChHHHHHHHhc----CC
Confidence 699999999999999999 88999999998753210 11 13578 899999999999888875 45
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
+|||+|
T Consensus 83 ~vih~A 88 (338)
T PLN00198 83 LVFHVA 88 (338)
T ss_pred EEEEeC
Confidence 566555
No 18
>PLN02650 dihydroflavonol-4-reductase
Probab=99.74 E-value=1.3e-16 Score=140.41 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=53.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------F--PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
||||||||||++|+++|+ ..|++|++++|+..... . ...+++ ++.+|++|++.+.++++++
T Consensus 9 LVTGatGfIGs~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~~~~~~~~~---- 78 (351)
T PLN02650 9 CVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPANVKKVKHLLDLPGATTRLT-LWKADLAVEGSFDDAIRGC---- 78 (351)
T ss_pred EEeCCcHHHHHHHHHHHH-----HCCCEEEEEEcCcchhHHHHHHHhccCCCCceE-EEEecCCChhhHHHHHhCC----
Confidence 699999999999999999 88999999999753211 0 012577 8999999999999988754
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
++|+|+|
T Consensus 79 d~ViH~A 85 (351)
T PLN02650 79 TGVFHVA 85 (351)
T ss_pred CEEEEeC
Confidence 4555544
No 19
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.73 E-value=1.3e-16 Score=139.89 Aligned_cols=123 Identities=14% Similarity=0.018 Sum_probs=86.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---CCC----------CCCceeeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---WFP----------SSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~----------~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
||||||||||++|+++|+ ..||+|++++|++... ... ..+++ ++.+|++|.+.+.+++++.
T Consensus 4 lVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~ 77 (343)
T TIGR01472 4 LITGITGQDGSYLAEFLL-----EKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMK-LHYGDLTDSSNLRRIIDEI 77 (343)
T ss_pred EEEcCCCcHHHHHHHHHH-----HCCCEEEEEecCCcccchhhhhhhhhcccccccccee-EEEeccCCHHHHHHHHHhC
Confidence 699999999999999999 8899999999975320 000 23578 9999999999999999876
Q ss_pred cCcceEEEccc-------------------------------ccc-C-------------CC-CCCCCCCCCCCCCCCCc
Q 048469 68 FNEITHVHDPA-------------------------------HSA-H-------------AN-SHDPPLREDLSRLPCQN 101 (239)
Q Consensus 68 ~~~v~~v~~~a-------------------------------~yg-~-------------~~-~~~~p~~E~~~~~~~~~ 101 (239)
. +|.|+|+| .+| + .+ ....|.+|+.+..| .+
T Consensus 78 ~--~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p-~~ 154 (343)
T TIGR01472 78 K--PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYP-RS 154 (343)
T ss_pred C--CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCC-CC
Confidence 3 67777766 011 0 00 11235777776432 24
Q ss_pred chH----HHHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 102 FYC----ALEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 102 ~y~----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
.|. ..|.++.. ...++++++.|+.++|||..
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 191 (343)
T TIGR01472 155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR 191 (343)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence 443 34555544 34578899999999999864
No 20
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.73 E-value=2e-16 Score=132.23 Aligned_cols=222 Identities=14% Similarity=0.059 Sum_probs=134.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-------CCCCCCceeeEeecCCCchhHHHHHhcccCcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-------WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~ 73 (239)
|||||.||||++++++++.+ ...++|+.++.-.-.. ....++.. |+++|+.|.+.+.+.++..+ +|+
T Consensus 4 LVTGGaGFIGsnfvr~~~~~---~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~-fv~~DI~D~~~v~~~~~~~~--~D~ 77 (340)
T COG1088 4 LVTGGAGFIGSNFVRYILNK---HPDDHVVNLDKLTYAGNLENLADVEDSPRYR-FVQGDICDRELVDRLFKEYQ--PDA 77 (340)
T ss_pred EEecCcchHHHHHHHHHHhc---CCCceEEEEecccccCCHHHHHhhhcCCCce-EEeccccCHHHHHHHHHhcC--CCe
Confidence 79999999999999999832 1225688887643211 11357899 99999999999999998653 666
Q ss_pred EEccc----------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH---
Q 048469 74 VHDPA----------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC--- 104 (239)
Q Consensus 74 v~~~a----------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~--- 104 (239)
|+|-| +||........++|++|..|. +.|.
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps-SPYSASK 156 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS-SPYSASK 156 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCC-CCcchhh
Confidence 66544 466433333468899886533 4453
Q ss_pred HHHHHHH-h--cCCCceEEEeccCceeccCCCccccHHHHHH-------------------------HHHHHhC--CCCC
Q 048469 105 ALEDLVA-S--YMPVISYSIHRSSIIIGSSSRSVYNSLLTLD-------------------------VICKVFG--VEFV 154 (239)
Q Consensus 105 ~~e~~l~-~--~~~~~~~~ilRp~~i~G~~~~~~~~~~~~l~-------------------------~ia~~~g--~~~~ 154 (239)
+..+.+. . +..|++++|.|+++-|||..... .++..+. |.|++.- +...
T Consensus 157 AasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg 235 (340)
T COG1088 157 AASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG 235 (340)
T ss_pred hhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC
Confidence 2344443 3 67899999999999999975421 1111111 3333321 1111
Q ss_pred CCCCCCCCCHHhhcC-cchHHHHHHHHHhCCCCCCCcccccchhhhhhhhcc---ccccccChhHH-HHcCCCCccchHH
Q 048469 155 PFDENDDFDFVGMMK-PKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHF---GFQHVCSMNKS-REFGFFKFADTLK 229 (239)
Q Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~---~~~~~~d~~ka-r~lG~~~~~~~~~ 229 (239)
.+ |+.+++..... ...++-+.|++.++-.. ....+ ...++..+ +....+|.+|+ ++|||.|+.+-++
T Consensus 236 ~~--GE~YNIgg~~E~~Nlevv~~i~~~l~~~~-~~~~~-----li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~ 307 (340)
T COG1088 236 KI--GETYNIGGGNERTNLEVVKTICELLGKDK-PDYRD-----LITFVEDRPGHDRRYAIDASKIKRELGWRPQETFET 307 (340)
T ss_pred cC--CceEEeCCCccchHHHHHHHHHHHhCccc-cchhh-----heEeccCCCCCccceeechHHHhhhcCCCcCCCHHH
Confidence 11 33333321111 22234555666665433 11111 11122221 23467899997 5799999999999
Q ss_pred HHHHHHHHh
Q 048469 230 SLGMWVTKL 238 (239)
Q Consensus 230 ~~~~~~~~~ 238 (239)
.++++++.+
T Consensus 308 GlrkTv~WY 316 (340)
T COG1088 308 GLRKTVDWY 316 (340)
T ss_pred HHHHHHHHH
Confidence 999988865
No 21
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.73 E-value=1.5e-16 Score=141.22 Aligned_cols=125 Identities=15% Similarity=0.084 Sum_probs=80.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEcc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDP-- 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~-- 77 (239)
||||||||||++|+++|. +.||+|++++|...... .....++ ++.+|++|.+.+.+++++++. |.|+...
T Consensus 25 lVtGgtGfIG~~l~~~L~-----~~G~~V~~v~r~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~D~-Vih~Aa~~~ 97 (370)
T PLN02695 25 CITGAGGFIASHIARRLK-----AEGHYIIASDWKKNEHMSEDMFCHE-FHLVDLRVMENCLKVTKGVDH-VFNLAADMG 97 (370)
T ss_pred EEECCccHHHHHHHHHHH-----hCCCEEEEEEeccccccccccccce-EEECCCCCHHHHHHHHhCCCE-EEEcccccC
Confidence 699999999999999999 78999999999643211 0112357 889999999888888875432 3444210
Q ss_pred ----------------c-------------------------cccCCC--CCCCCCCCCCC-CCCCCcchH----HHHHH
Q 048469 78 ----------------A-------------------------HSAHAN--SHDPPLREDLS-RLPCQNFYC----ALEDL 109 (239)
Q Consensus 78 ----------------a-------------------------~yg~~~--~~~~p~~E~~~-~~~~~~~y~----~~e~~ 109 (239)
. +||... ....++.|+.+ +..+.+.|. ..|++
T Consensus 98 ~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~ 177 (370)
T PLN02695 98 GMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEEL 177 (370)
T ss_pred CccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHH
Confidence 0 233110 01124666552 122223442 34555
Q ss_pred HHh--cCCCceEEEeccCceeccCC
Q 048469 110 VAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 110 l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
+.. ...+++++++||+.||||..
T Consensus 178 ~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 178 CKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHhCCCEEEEEECCccCCCC
Confidence 544 45689999999999999864
No 22
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.73 E-value=6.6e-17 Score=139.53 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=74.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHH----HHHhc--ccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTT----EKLSL--LFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~----~~l~~--~~~~v~~v 74 (239)
||||||||||++|+++|+ +.|++|+++.|+..... .... +..+|+.|..+.. +++++ ... +|.|
T Consensus 3 lVtGa~GfiG~~l~~~L~-----~~g~~~v~~~~~~~~~~---~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~-~d~V 72 (308)
T PRK11150 3 IVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGT---KFVN-LVDLDIADYMDKEDFLAQIMAGDDFGD-IEAI 72 (308)
T ss_pred EEecCCcHHHHHHHHHHH-----hCCCceEEEecCCCcch---HHHh-hhhhhhhhhhhHHHHHHHHhcccccCC-ccEE
Confidence 699999999999999999 78998888777653221 1123 4556766643322 22221 112 6777
Q ss_pred Eccc------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----HHHH
Q 048469 75 HDPA------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----ALED 108 (239)
Q Consensus 75 ~~~a------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~~e~ 108 (239)
+|+| +||. ....+.+|+.+..| .+.|. ..|+
T Consensus 73 ih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~--~~~~~~~E~~~~~p-~~~Y~~sK~~~E~ 149 (308)
T PRK11150 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGG--RTDDFIEEREYEKP-LNVYGYSKFLFDE 149 (308)
T ss_pred EECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCc--CCCCCCccCCCCCC-CCHHHHHHHHHHH
Confidence 7765 2331 11234666655433 24443 3465
Q ss_pred HHHh--cCCCceEEEeccCceeccCC
Q 048469 109 LVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 109 ~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
++.+ ...+++++++||+.|||++.
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 150 YVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred HHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 5555 35689999999999999875
No 23
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.72 E-value=2e-16 Score=136.23 Aligned_cols=220 Identities=14% Similarity=0.041 Sum_probs=125.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCCC---CC----CCCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPKQ---SW----FPSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~---~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
|||||||+||++|+++|+ ..| ++|++++|.... .. ...++++ ++.+|++|++++.+++++.. +
T Consensus 3 lItGatG~iG~~l~~~l~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~ 74 (317)
T TIGR01181 3 LVTGGAGFIGSNFVRYIL-----NEHPDAEVIVLDKLTYAGNLENLADLEDNPRYR-FVKGDIGDRELVSRLFTEHQ--P 74 (317)
T ss_pred EEEcCCchHHHHHHHHHH-----HhCCCCEEEEecCCCcchhhhhhhhhccCCCcE-EEEcCCcCHHHHHHHHhhcC--C
Confidence 699999999999999999 555 789999874211 00 0123678 89999999999999998753 5
Q ss_pred eEEEccc----------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH-
Q 048469 72 THVHDPA----------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC- 104 (239)
Q Consensus 72 ~~v~~~a----------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~- 104 (239)
|.|+|++ +||.. ....+++|+.+..+ .+.|.
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~-~~~~~~~e~~~~~~-~~~Y~~ 152 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDL-EKGDAFTETTPLAP-SSPYSA 152 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCC-CCCCCcCCCCCCCC-CCchHH
Confidence 6666655 01100 01125667665432 23342
Q ss_pred ---HHHHHHHh--cCCCceEEEeccCceeccCCCc--cccH-HHHHH---------------------HHHHHhC--CCC
Q 048469 105 ---ALEDLVAS--YMPVISYSIHRSSIIIGSSSRS--VYNS-LLTLD---------------------VICKVFG--VEF 153 (239)
Q Consensus 105 ---~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~~--~~~~-~~~l~---------------------~ia~~~g--~~~ 153 (239)
..|.++.+ ...+++++++||+.+||+.... .... +..+. |+|+.+- ++.
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~ 232 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK 232 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC
Confidence 34555544 3568999999999999986421 1111 11110 4444431 111
Q ss_pred CCCCCCCCCCHHhh-cCcchHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHH-HcCCCCccchHHHH
Q 048469 154 VPFDENDDFDFVGM-MKPKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSR-EFGFFKFADTLKSL 231 (239)
Q Consensus 154 ~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar-~lG~~~~~~~~~~~ 231 (239)
.. .+..+++..- -....+..+.+.+.++..+ ..+....... +....+.+|++|++ ++||.+.++..+.+
T Consensus 233 ~~--~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~k~~~~lG~~p~~~~~~~i 303 (317)
T TIGR01181 233 GR--VGETYNIGGGNERTNLEVVETILELLGKDE-DLITHVEDRP------GHDRRYAIDASKIKRELGWAPKYTFEEGL 303 (317)
T ss_pred CC--CCceEEeCCCCceeHHHHHHHHHHHhCCCc-ccccccCCCc------cchhhhcCCHHHHHHHhCCCCCCcHHHHH
Confidence 11 1222222110 0122334445555565432 1111111000 00112458999997 59999988999989
Q ss_pred HHHHHHhC
Q 048469 232 GMWVTKLR 239 (239)
Q Consensus 232 ~~~~~~~~ 239 (239)
.+.++.++
T Consensus 304 ~~~~~~~~ 311 (317)
T TIGR01181 304 RKTVQWYL 311 (317)
T ss_pred HHHHHHHH
Confidence 88887653
No 24
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.72 E-value=1.2e-16 Score=136.25 Aligned_cols=207 Identities=15% Similarity=0.109 Sum_probs=114.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
||||||||||++|+++|+ ..||+|++++|+ .+|+.|++++.+++++.+ +++|+|++
T Consensus 3 lv~G~tG~iG~~l~~~l~-----~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~--~d~vi~~a~~ 60 (287)
T TIGR01214 3 LITGANGQLGRELVQQLS-----PEGRVVVALTSS---------------QLDLTDPEALERLLRAIR--PDAVVNTAAY 60 (287)
T ss_pred EEEcCCCHHHHHHHHHHH-----hcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCC--CCEEEECCcc
Confidence 699999999999999999 789999999885 245566666666665542 45555544
Q ss_pred ------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----HHHHHHHh
Q 048469 79 ------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----ALEDLVAS 112 (239)
Q Consensus 79 ------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~~e~~l~~ 112 (239)
+|+ .....|++|+++..+ .+.|. ..|+.+.
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~--~~~~~~~~E~~~~~~-~~~Y~~~K~~~E~~~~- 136 (287)
T TIGR01214 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFD--GEGKRPYREDDATNP-LNVYGQSKLAGEQAIR- 136 (287)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeec--CCCCCCCCCCCCCCC-cchhhHHHHHHHHHHH-
Confidence 232 112346788876432 23342 2344443
Q ss_pred cCCCceEEEeccCceeccCCC-ccccHHHH-H-------------------HHHHHHhC--CCCCCCCCCCCCCHHh-hc
Q 048469 113 YMPVISYSIHRSSIIIGSSSR-SVYNSLLT-L-------------------DVICKVFG--VEFVPFDENDDFDFVG-MM 168 (239)
Q Consensus 113 ~~~~~~~~ilRp~~i~G~~~~-~~~~~~~~-l-------------------~~ia~~~g--~~~~~~~~~~~~~~~~-~~ 168 (239)
..+++++|+||+.|||+... ++...+.. + .|+|+.+. +..... .+..+++.. ..
T Consensus 137 -~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~-~~~~~ni~~~~~ 214 (287)
T TIGR01214 137 -AAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLAR-ARGVYHLANSGQ 214 (287)
T ss_pred -HhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccC-CCCeEEEECCCC
Confidence 34789999999999999742 22211111 0 04444321 111000 122232221 11
Q ss_pred CcchHHHHHHHHHhCCCCCCC--cccc--cchhhhhhhhccccccccChhHHHH-cCCCCccchHHHHHHHHHH
Q 048469 169 KPKAKVWDEIAEQHGLYNINK--LEEI--TCFEALINVLHFGFQHVCSMNKSRE-FGFFKFADTLKSLGMWVTK 237 (239)
Q Consensus 169 ~~~~~~~~~i~~~~gl~~~~~--~~~~--~~~~~~d~~~~~~~~~~~d~~kar~-lG~~~~~~~~~~~~~~~~~ 237 (239)
....+.++.+.+.+|... .. +..+ ..+.........+....+|++|+|+ +|| +..+.++++.+.+.+
T Consensus 215 ~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 215 CSWYEFAQAIFEEAGADG-LLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT-PLPHWREALRAYLQE 286 (287)
T ss_pred cCHHHHHHHHHHHhCccc-ccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC-CCccHHHHHHHHHhh
Confidence 122345566666666432 11 1100 0111001111112346799999986 899 678899999888764
No 25
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.72 E-value=1.1e-16 Score=137.54 Aligned_cols=109 Identities=13% Similarity=-0.001 Sum_probs=70.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
||||||||||++|++.|+ ..|++|+++.++ ..+|++|.+++.+.++..+ +++|||+|
T Consensus 1 lItGa~GfiG~~l~~~L~-----~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~--~d~Vih~A~~ 59 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLE-----ALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEK--PTYVILAAAK 59 (306)
T ss_pred CcccCCCcccHHHHHHHH-----hCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccC--CCEEEEeeee
Confidence 799999999999999999 789987766432 2356666666666665432 44444443
Q ss_pred --------------------------------------------cccCCCCCCCCCCCCCCCC---CCCc-chH----HH
Q 048469 79 --------------------------------------------HSAHANSHDPPLREDLSRL---PCQN-FYC----AL 106 (239)
Q Consensus 79 --------------------------------------------~yg~~~~~~~p~~E~~~~~---~~~~-~y~----~~ 106 (239)
+||. ....|++|+++.. .+.+ .|. ..
T Consensus 60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~--~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPK--FAPQPIPETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred ecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCC--CCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence 3431 1245788876321 1122 242 23
Q ss_pred HHHHHh--cCCCceEEEeccCceeccCC
Q 048469 107 EDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 107 e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
|+.+.+ ...+++++++||+.|||+..
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 544443 35689999999999999964
No 26
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.71 E-value=4.7e-16 Score=133.84 Aligned_cols=221 Identities=17% Similarity=0.097 Sum_probs=125.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
||||||||||++|+++|+ ++||+|++++|..........+++ ++.+|++|.+.+.++++... +.|+|++
T Consensus 4 LVtG~tGfiG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~---d~vih~aa~ 74 (314)
T COG0451 4 LVTGGAGFIGSHLVERLL-----AAGHDVRGLDRLRDGLDPLLSGVE-FVVLDLTDRDLVDELAKGVP---DAVIHLAAQ 74 (314)
T ss_pred EEEcCcccHHHHHHHHHH-----hCCCeEEEEeCCCccccccccccc-eeeecccchHHHHHHHhcCC---CEEEEcccc
Confidence 799999999999999999 789999999997654321114678 99999999877777777652 3333332
Q ss_pred -------------------------------------c-------ccCCCCCCCCCCCC-CCCCCCCcchH----HHHHH
Q 048469 79 -------------------------------------H-------SAHANSHDPPLRED-LSRLPCQNFYC----ALEDL 109 (239)
Q Consensus 79 -------------------------------------~-------yg~~~~~~~p~~E~-~~~~~~~~~y~----~~e~~ 109 (239)
+ |+. .....+++|+ .+..|. +.|. ..|+.
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~-~~~~~~~~E~~~~~~p~-~~Yg~sK~~~E~~ 152 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYG-DPPPLPIDEDLGPPRPL-NPYGVSKLAAEQL 152 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECC-CCCCCCcccccCCCCCC-CHHHHHHHHHHHH
Confidence 0 110 0122367887 443322 2342 34565
Q ss_pred HHh--cCCCceEEEeccCceeccCCCcccc--HHHH----HH----------------------HHHHHhCCCCCCCCCC
Q 048469 110 VAS--YMPVISYSIHRSSIIIGSSSRSVYN--SLLT----LD----------------------VICKVFGVEFVPFDEN 159 (239)
Q Consensus 110 l~~--~~~~~~~~ilRp~~i~G~~~~~~~~--~~~~----l~----------------------~ia~~~g~~~~~~~~~ 159 (239)
+.+ ...+++++++||+.|||++....+. +... +. |+++.+-........+
T Consensus 153 ~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 232 (314)
T COG0451 153 LRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG 232 (314)
T ss_pred HHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc
Confidence 555 3468999999999999998643221 1111 10 3333321111100001
Q ss_pred CCCCHHhhc--CcchHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHH-HcCCCCccchHHHHHHHHH
Q 048469 160 DDFDFVGMM--KPKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSR-EFGFFKFADTLKSLGMWVT 236 (239)
Q Consensus 160 ~~~~~~~~~--~~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar-~lG~~~~~~~~~~~~~~~~ 236 (239)
.+++.... ....+..+.+.+..|... ..+..... ...........+|++|++ +|||++..+..+.+.+.++
T Consensus 233 -~~ni~~~~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~ 306 (314)
T COG0451 233 -VFNIGSGTAEITVRELAEAVAEAVGSKA-PLIVYIPL----GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLE 306 (314)
T ss_pred -EEEeCCCCCcEEHHHHHHHHHHHhCCCC-cceeecCC----CCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 22222111 122334444555555443 11111000 000011134678999998 6999999999998888776
Q ss_pred Hh
Q 048469 237 KL 238 (239)
Q Consensus 237 ~~ 238 (239)
.+
T Consensus 307 ~~ 308 (314)
T COG0451 307 WL 308 (314)
T ss_pred HH
Confidence 54
No 27
>PLN00016 RNA-binding protein; Provisional
Probab=99.71 E-value=2.2e-16 Score=140.42 Aligned_cols=220 Identities=15% Similarity=0.097 Sum_probs=124.9
Q ss_pred Cee----cccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------------CCCCCceeeEeecCCCchhHHHHH
Q 048469 1 MVI----GIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------------FPSSAVDHYITFDATNSGNTTEKL 64 (239)
Q Consensus 1 LVt----GatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~~Dl~d~~~~~~~l 64 (239)
||| |||||||++|+++|+ +.||+|++++|++.... +...+++ ++.+|+.| +.+++
T Consensus 56 LVt~~~~GatG~iG~~lv~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d---~~~~~ 126 (378)
T PLN00016 56 LIVNTNSGGHAFIGFYLAKELV-----KAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVK-TVWGDPAD---VKSKV 126 (378)
T ss_pred EEEeccCCCceeEhHHHHHHHH-----HCCCEEEEEecCCcchhhhccCchhhhhHhhhcCce-EEEecHHH---HHhhh
Confidence 699 999999999999999 88999999999864311 0123588 89999876 44444
Q ss_pred hcccCcceEEEccc-----------------------------cccCCCCCCCCCCCCCCCCCCCcchHHHHHHHHhcCC
Q 048469 65 SLLFNEITHVHDPA-----------------------------HSAHANSHDPPLREDLSRLPCQNFYCALEDLVASYMP 115 (239)
Q Consensus 65 ~~~~~~v~~v~~~a-----------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~~~e~~l~~~~~ 115 (239)
... . +++|++++ +||. ....|..|+++..+. ......|+++. ..
T Consensus 127 ~~~-~-~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~--~~~~p~~E~~~~~p~-~sK~~~E~~l~--~~ 199 (378)
T PLN00016 127 AGA-G-FDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKK--SDEPPHVEGDAVKPK-AGHLEVEAYLQ--KL 199 (378)
T ss_pred ccC-C-ccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCC--CCCCCCCCCCcCCCc-chHHHHHHHHH--Hc
Confidence 322 2 56666553 2221 112456676653322 22345666665 46
Q ss_pred CceEEEeccCceeccCCCccc-c-HHHHHH---------------------HHHHHhCCCCCCCC-CCCCCCHHh-hcCc
Q 048469 116 VISYSIHRSSIIIGSSSRSVY-N-SLLTLD---------------------VICKVFGVEFVPFD-ENDDFDFVG-MMKP 170 (239)
Q Consensus 116 ~~~~~ilRp~~i~G~~~~~~~-~-~~~~l~---------------------~ia~~~g~~~~~~~-~~~~~~~~~-~~~~ 170 (239)
+++|+++||+.+||+...+.+ . ++..+. |+|+++......+. .+..+++.. ..-.
T Consensus 200 ~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s 279 (378)
T PLN00016 200 GVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVT 279 (378)
T ss_pred CCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccC
Confidence 899999999999998653311 1 111111 56655421111110 122233221 0112
Q ss_pred chHHHHHHHHHhCCCCCCCccccc--chhhh---hhhhccccccccChhHHHH-cCCCCccchHHHHHHHHHHhC
Q 048469 171 KAKVWDEIAEQHGLYNINKLEEIT--CFEAL---INVLHFGFQHVCSMNKSRE-FGFFKFADTLKSLGMWVTKLR 239 (239)
Q Consensus 171 ~~~~~~~i~~~~gl~~~~~~~~~~--~~~~~---d~~~~~~~~~~~d~~kar~-lG~~~~~~~~~~~~~~~~~~~ 239 (239)
..++.+.+.+..|... .+.... .+.+. .+.+. .....+|++|+++ |||++.++..+.+.+.++.++
T Consensus 280 ~~el~~~i~~~~g~~~--~i~~~~~~~~~~~~~~~~p~~-~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~ 351 (378)
T PLN00016 280 FDGMAKACAKAAGFPE--EIVHYDPKAVGFGAKKAFPFR-DQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYF 351 (378)
T ss_pred HHHHHHHHHHHhCCCC--ceeecCccccCcccccccccc-ccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 2344555566666432 111100 00000 00001 1234679999985 999999999999999988763
No 28
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.70 E-value=3.4e-16 Score=133.83 Aligned_cols=129 Identities=19% Similarity=0.143 Sum_probs=85.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
||||||||+|++|+++|+ +.| ++|++++|++.... ......+ ++.+|++|++++.+++++++ .|
T Consensus 1 LVTGgsGflG~~iv~~Ll-----~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~a~~g~d----~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLL-----ERGYIYEVRVLDRSPPPKFLKDLQKSGVKE-YIQGDITDPESLEEALEGVD----VV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHH-----HCCCceEEEEcccccccccchhhhccccee-EEEeccccHHHHHHHhcCCc----eE
Confidence 799999999999999999 788 78999998765432 1123456 89999999999999999864 44
Q ss_pred Eccc-------------------------------------ccc-C---CCC--CCCC---CCCCCCCCCCC-cchH---
Q 048469 75 HDPA-------------------------------------HSA-H---ANS--HDPP---LREDLSRLPCQ-NFYC--- 104 (239)
Q Consensus 75 ~~~a-------------------------------------~yg-~---~~~--~~~p---~~E~~~~~~~~-~~y~--- 104 (239)
||+| +|- . ..+ ...+ .+|++|..+.+ +.|.
T Consensus 71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK 150 (280)
T PF01073_consen 71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESK 150 (280)
T ss_pred EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHH
Confidence 4443 121 0 001 1122 35665532222 2332
Q ss_pred -HHHHHHHh-cC------CCceEEEeccCceeccCCCccccHH
Q 048469 105 -ALEDLVAS-YM------PVISYSIHRSSIIIGSSSRSVYNSL 139 (239)
Q Consensus 105 -~~e~~l~~-~~------~~~~~~ilRp~~i~G~~~~~~~~~~ 139 (239)
.+|+++.+ .. ..+.+++|||+.||||+.......+
T Consensus 151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~ 193 (280)
T PF01073_consen 151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRL 193 (280)
T ss_pred HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchh
Confidence 35666655 22 2499999999999999876544443
No 29
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.70 E-value=6.9e-16 Score=135.10 Aligned_cols=124 Identities=15% Similarity=0.041 Sum_probs=86.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---CC---------CCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---WF---------PSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~---------~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
||||||||||++|+++|+ .+||+|++++|++... .. ...+++ ++.+|++|.+.+.++++...
T Consensus 10 lVTGatGfiG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 10 LITGITGQDGSYLTEFLL-----SKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMK-LHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred EEECCCCccHHHHHHHHH-----HCCCEEEEEecccccccccchhhhccccccccCceE-EEEecCCCHHHHHHHHHHcC
Confidence 699999999999999999 8899999999875321 00 013578 99999999999999998763
Q ss_pred CcceEEEccc-------------------------------ccc-C-----C----------CCCCCCCCCCCCCCCCCc
Q 048469 69 NEITHVHDPA-------------------------------HSA-H-----A----------NSHDPPLREDLSRLPCQN 101 (239)
Q Consensus 69 ~~v~~v~~~a-------------------------------~yg-~-----~----------~~~~~p~~E~~~~~~~~~ 101 (239)
++.|+|+| .++ . . +....|++|+.+..| .+
T Consensus 84 --~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p-~~ 160 (340)
T PLN02653 84 --PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHP-RS 160 (340)
T ss_pred --CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCC-CC
Confidence 67888776 011 0 0 011125778776433 23
Q ss_pred chH----HHHHHHHh--cCCCceEEEeccCceeccCCC
Q 048469 102 FYC----ALEDLVAS--YMPVISYSIHRSSIIIGSSSR 133 (239)
Q Consensus 102 ~y~----~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~ 133 (239)
.|. ..|.++.. ...++.++..|+..+|||+..
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 161 PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 443 34555544 345788888999999998643
No 30
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.70 E-value=4.2e-16 Score=137.25 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=52.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
||||||||||++|+++|+ +.||+|++++|++.... ....+++ ++.+|++|.+.+.++++++ ++|
T Consensus 14 LVtG~~GfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~----d~V 83 (353)
T PLN02896 14 CVTGATGYIGSWLVKLLL-----QRGYTVHATLRDPAKSLHLLSKWKEGDRLR-LFRADLQEEGSFDEAVKGC----DGV 83 (353)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhhccCCeEE-EEECCCCCHHHHHHHHcCC----CEE
Confidence 699999999999999999 88999999999753210 0124688 8999999999998888753 445
Q ss_pred Eccc
Q 048469 75 HDPA 78 (239)
Q Consensus 75 ~~~a 78 (239)
+|+|
T Consensus 84 ih~A 87 (353)
T PLN02896 84 FHVA 87 (353)
T ss_pred EECC
Confidence 4443
No 31
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.69 E-value=3.3e-16 Score=141.57 Aligned_cols=212 Identities=13% Similarity=0.040 Sum_probs=117.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
||||||||||++|+++|+ ..||+|++++|...... ...++++ ++.+|+.+.. +.+ +|.|
T Consensus 124 LVTGatGFIGs~Lv~~Ll-----~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~-~~~~Di~~~~-----~~~----~D~V 188 (436)
T PLN02166 124 VVTGGAGFVGSHLVDKLI-----GRGDEVIVIDNFFTGRKENLVHLFGNPRFE-LIRHDVVEPI-----LLE----VDQI 188 (436)
T ss_pred EEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCccHhHhhhhccCCceE-EEECcccccc-----ccC----CCEE
Confidence 699999999999999999 88999999998532110 0124677 8888887642 222 4555
Q ss_pred Eccc--------------------------------------------cccCCCCCCCCCCCCCC----CCCCCcchH--
Q 048469 75 HDPA--------------------------------------------HSAHANSHDPPLREDLS----RLPCQNFYC-- 104 (239)
Q Consensus 75 ~~~a--------------------------------------------~yg~~~~~~~p~~E~~~----~~~~~~~y~-- 104 (239)
||+| +||. ....|.+|+.. +..+.+.|.
T Consensus 189 iHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~--~~~~p~~E~~~~~~~p~~p~s~Yg~S 266 (436)
T PLN02166 189 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGD--PLEHPQKETYWGNVNPIGERSCYDEG 266 (436)
T ss_pred EECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCC--CCCCCCCccccccCCCCCCCCchHHH
Confidence 5544 2431 12246677631 111123342
Q ss_pred --HHHHHHHh--cCCCceEEEeccCceeccCCC----ccc-cHHHHHH---------------------HHHHHhCCCCC
Q 048469 105 --ALEDLVAS--YMPVISYSIHRSSIIIGSSSR----SVY-NSLLTLD---------------------VICKVFGVEFV 154 (239)
Q Consensus 105 --~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~----~~~-~~~~~l~---------------------~ia~~~g~~~~ 154 (239)
..|+++.+ +..+++++++||++|||++.. ..+ +++..+. |+++++-.-..
T Consensus 267 K~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~ 346 (436)
T PLN02166 267 KRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME 346 (436)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 45666655 456899999999999998742 111 1221221 45544311000
Q ss_pred CCCCCCCCCHHhh-cCcchHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHHH-cCCCCccchHHHHH
Q 048469 155 PFDENDDFDFVGM-MKPKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSRE-FGFFKFADTLKSLG 232 (239)
Q Consensus 155 ~~~~~~~~~~~~~-~~~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar~-lG~~~~~~~~~~~~ 232 (239)
.. .+..+++..- -....+..+.+.+..|... .+..... . -+......+|++|+++ |||++.++.++.+.
T Consensus 347 ~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~--~i~~~p~-~-----~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~ 417 (436)
T PLN02166 347 GE-HVGPFNLGNPGEFTMLELAEVVKETIDSSA--TIEFKPN-T-----ADDPHKRKPDISKAKELLNWEPKISLREGLP 417 (436)
T ss_pred cC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCC--CeeeCCC-C-----CCCccccccCHHHHHHHcCCCCCCCHHHHHH
Confidence 00 0112222110 0112233444444454321 1110000 0 0111345789999986 89999999999999
Q ss_pred HHHHHh
Q 048469 233 MWVTKL 238 (239)
Q Consensus 233 ~~~~~~ 238 (239)
++++.+
T Consensus 418 ~~i~~~ 423 (436)
T PLN02166 418 LMVSDF 423 (436)
T ss_pred HHHHHH
Confidence 887754
No 32
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.68 E-value=1e-15 Score=134.42 Aligned_cols=70 Identities=10% Similarity=-0.017 Sum_probs=52.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEecCCCCC------CC-CCCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAWCPKQS------WF-PSSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~------~~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
||||||||||++|+++|+ ..|++ |+++.|..... .. ...+++ ++.+|++|.+++.+++++.. +|
T Consensus 4 lITGgtG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d 75 (352)
T PRK10084 4 LVTGGAGFIGSAVVRHII-----NNTQDSVVNVDKLTYAGNLESLADVSDSERYV-FEHADICDRAELDRIFAQHQ--PD 75 (352)
T ss_pred EEECCCcHHhHHHHHHHH-----HhCCCeEEEecCCCccchHHHHHhcccCCceE-EEEecCCCHHHHHHHHHhcC--CC
Confidence 699999999999999999 77865 76666543110 00 123567 89999999999999998643 67
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
.|+|+|
T Consensus 76 ~vih~A 81 (352)
T PRK10084 76 AVMHLA 81 (352)
T ss_pred EEEECC
Confidence 777766
No 33
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.68 E-value=1e-15 Score=133.63 Aligned_cols=122 Identities=17% Similarity=0.064 Sum_probs=83.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
||||||||||++|+++|+ ++|++|++++|...... ....++. ++.+|++|++++.+++.... +|
T Consensus 4 lVtGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~d 75 (338)
T PRK10675 4 LVTGGSGYIGSHTCVQLL-----QNGHDVVILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALLTEILHDHA--ID 75 (338)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCeEEEEecCCCchHhHHHHHHHhcCCCce-EEEccCCCHHHHHHHHhcCC--CC
Confidence 699999999999999999 88999999987532111 0123467 88999999999998887532 67
Q ss_pred EEEccc---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH---
Q 048469 73 HVHDPA---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC--- 104 (239)
Q Consensus 73 ~v~~~a---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~--- 104 (239)
+|+|++ .|| .....+++|+++...+...|.
T Consensus 76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg--~~~~~~~~E~~~~~~p~~~Y~~sK 153 (338)
T PRK10675 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYG--DQPKIPYVESFPTGTPQSPYGKSK 153 (338)
T ss_pred EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhC--CCCCCccccccCCCCCCChhHHHH
Confidence 777654 111 112346778776411223342
Q ss_pred -HHHHHHHh-c--CCCceEEEeccCceeccCC
Q 048469 105 -ALEDLVAS-Y--MPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 105 -~~e~~l~~-~--~~~~~~~ilRp~~i~G~~~ 132 (239)
..|+++.+ . ..+++++++|++.+||+.+
T Consensus 154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 185 (338)
T PRK10675 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCc
Confidence 34665554 2 3479999999999999753
No 34
>PLN02240 UDP-glucose 4-epimerase
Probab=99.67 E-value=2.2e-15 Score=132.25 Aligned_cols=120 Identities=13% Similarity=0.042 Sum_probs=84.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----------CCCCCceeeEeecCCCchhHHHHHhcccC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----------FPSSAVDHYITFDATNSGNTTEKLSLLFN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~ 69 (239)
||||||||||++|+++|+ .+|++|++++|...... ....+++ ++.+|++|++.+.++++...
T Consensus 9 lItGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~~~~~~- 81 (352)
T PLN02240 9 LVTGGAGYIGSHTVLQLL-----LAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLV-FHKVDLRDKEALEKVFASTR- 81 (352)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCcchHHHHHHHHHhhcccCccce-EEecCcCCHHHHHHHHHhCC-
Confidence 699999999999999999 78999999987532110 0124678 99999999999998887543
Q ss_pred cceEEEccc---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH
Q 048469 70 EITHVHDPA---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC 104 (239)
Q Consensus 70 ~v~~v~~~a---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~ 104 (239)
++.|+|++ +|| .....|++|+.+..+ .+.|.
T Consensus 82 -~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg--~~~~~~~~E~~~~~~-~~~Y~ 157 (352)
T PLN02240 82 -FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYG--QPEEVPCTEEFPLSA-TNPYG 157 (352)
T ss_pred -CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC--CCCCCCCCCCCCCCC-CCHHH
Confidence 67777765 122 112346788876433 24443
Q ss_pred ----HHHHHHHh---cCCCceEEEeccCceeccC
Q 048469 105 ----ALEDLVAS---YMPVISYSIHRSSIIIGSS 131 (239)
Q Consensus 105 ----~~e~~l~~---~~~~~~~~ilRp~~i~G~~ 131 (239)
..|.++.. ...+++.+++|++.+||+.
T Consensus 158 ~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 158 RTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 35665554 2357899999999999974
No 35
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.67 E-value=2.6e-15 Score=129.55 Aligned_cols=122 Identities=12% Similarity=-0.013 Sum_probs=77.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhc-ccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSL-LFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~-~~~~v~~v~~~a 78 (239)
||||||||||+++++.|. ..|+ +|+++.|+............ .+..|+.+.+.++.+... ... +|+|+|+|
T Consensus 2 lItGatG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~-~D~vvh~A 74 (314)
T TIGR02197 2 IVTGGAGFIGSNLVKALN-----ERGITDILVVDNLRDGHKFLNLADL-VIADYIDKEDFLDRLEKGAFGK-IEAIFHQG 74 (314)
T ss_pred EEeCCcchhhHHHHHHHH-----HcCCceEEEEecCCCchhhhhhhhe-eeeccCcchhHHHHHHhhccCC-CCEEEECc
Confidence 799999999999999999 7887 79888876432211111124 567888887766655541 112 67777766
Q ss_pred ------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----HHHHHHHh
Q 048469 79 ------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----ALEDLVAS 112 (239)
Q Consensus 79 ------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~~e~~l~~ 112 (239)
+|| ....+.+|+++...+.+.|. ..|.++.+
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~---~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYG---DGEAGFREGRELERPLNVYGYSKFLFDQYVRR 151 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcC---CCCCCcccccCcCCCCCHHHHHHHHHHHHHHH
Confidence 122 11235566665322223342 24555543
Q ss_pred ---c-CCCceEEEeccCceeccCC
Q 048469 113 ---Y-MPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 113 ---~-~~~~~~~ilRp~~i~G~~~ 132 (239)
+ ..+++++++||+.|||+..
T Consensus 152 ~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 152 RVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred HhHhhccCCceEEEEEeeccCCCC
Confidence 1 3467999999999999974
No 36
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.66 E-value=1.3e-15 Score=138.03 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=74.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
||||||||||++|+++|+ ++|++|++++|..... ....++++ ++.+|+.++. +.+ +|.|
T Consensus 123 LVTGatGfIGs~Lv~~Ll-----~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~-~i~~D~~~~~-----l~~----~D~V 187 (442)
T PLN02206 123 VVTGGAGFVGSHLVDRLM-----ARGDSVIVVDNFFTGRKENVMHHFSNPNFE-LIRHDVVEPI-----LLE----VDQI 187 (442)
T ss_pred EEECcccHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhhhhccCCceE-EEECCccChh-----hcC----CCEE
Confidence 699999999999999999 8899999998753210 01234678 8888987653 333 4455
Q ss_pred Eccc--------------------------------------------cccCCCCCCCCCCCCCC----CCCCCcchH--
Q 048469 75 HDPA--------------------------------------------HSAHANSHDPPLREDLS----RLPCQNFYC-- 104 (239)
Q Consensus 75 ~~~a--------------------------------------------~yg~~~~~~~p~~E~~~----~~~~~~~y~-- 104 (239)
||+| +||. ....|.+|+.. +....+.|.
T Consensus 188 iHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~--~~~~p~~E~~~~~~~P~~~~s~Y~~S 265 (442)
T PLN02206 188 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD--PLQHPQVETYWGNVNPIGVRSCYDEG 265 (442)
T ss_pred EEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCC--CCCCCCCccccccCCCCCccchHHHH
Confidence 5444 2331 11235666642 111113342
Q ss_pred --HHHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 105 --ALEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 105 --~~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
..|+.+.+ +..+++++++||+.|||+..
T Consensus 266 K~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~ 297 (442)
T PLN02206 266 KRTAETLTMDYHRGANVEVRIARIFNTYGPRM 297 (442)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 35665554 45689999999999999863
No 37
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.62 E-value=9.9e-16 Score=126.57 Aligned_cols=120 Identities=19% Similarity=0.192 Sum_probs=90.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCC--CCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFP--SSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~--~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
||||||||||++|+++|+ ++|++|+.++|++...... ..+++ ++.+|+.|.+.+.++++... +|.|+|++
T Consensus 2 lI~GatG~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~dl~~~~~~~~~~~~~~--~d~vi~~a 73 (236)
T PF01370_consen 2 LITGATGFIGSALVRQLL-----KKGHEVIVLSRSSNSESFEEKKLNVE-FVIGDLTDKEQLEKLLEKAN--IDVVIHLA 73 (236)
T ss_dssp EEETTTSHHHHHHHHHHH-----HTTTEEEEEESCSTGGHHHHHHTTEE-EEESETTSHHHHHHHHHHHT--ESEEEEEB
T ss_pred EEEccCCHHHHHHHHHHH-----HcCCccccccccccccccccccceEE-EEEeeccccccccccccccC--ceEEEEee
Confidence 699999999999999999 8999999999987653210 12788 99999999999999999873 77787765
Q ss_pred ---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----HHHHH
Q 048469 79 ---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----ALEDL 109 (239)
Q Consensus 79 ---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~~e~~ 109 (239)
.||. ....+++|+.+..+ .+.|. ..|++
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~--~~~~~~~e~~~~~~-~~~Y~~~K~~~e~~ 150 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGD--PDGEPIDEDSPINP-LSPYGASKRAAEEL 150 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTS--SSSSSBETTSGCCH-SSHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccc-cccccccccccccc
Confidence 2331 13456788887532 23342 24555
Q ss_pred HHh--cCCCceEEEeccCceeccC
Q 048469 110 VAS--YMPVISYSIHRSSIIIGSS 131 (239)
Q Consensus 110 l~~--~~~~~~~~ilRp~~i~G~~ 131 (239)
+.+ +..+++++++||+.|||+.
T Consensus 151 ~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 151 LRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccc
Confidence 554 3458999999999999998
No 38
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.61 E-value=2.4e-14 Score=124.82 Aligned_cols=229 Identities=14% Similarity=0.078 Sum_probs=131.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCCC-CCC------CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPKQ-SWF------PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~-~~~------~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
|||||+||+|+||+++|+ +.+ .+|+.++..+.. .+. ....++ ++.+|++|...+..++.++ . |
T Consensus 8 lVtGG~GflG~hlv~~L~-----~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~-~~~~D~~~~~~i~~a~~~~-~-V 79 (361)
T KOG1430|consen 8 LVTGGSGFLGQHLVQALL-----ENELKLEIRVVDKTPTQSNLPAELTGFRSGRVT-VILGDLLDANSISNAFQGA-V-V 79 (361)
T ss_pred EEECCccHHHHHHHHHHH-----hcccccEEEEeccCccccccchhhhcccCCcee-EEecchhhhhhhhhhccCc-e-E
Confidence 699999999999999999 555 899999998752 221 146788 9999999999999999875 2 4
Q ss_pred eEEEccc-----------------------------------ccc-C----C-CCCCCCCCCCCCCC-CCCcchH----H
Q 048469 72 THVHDPA-----------------------------------HSA-H----A-NSHDPPLREDLSRL-PCQNFYC----A 105 (239)
Q Consensus 72 ~~v~~~a-----------------------------------~yg-~----~-~~~~~p~~E~~~~~-~~~~~y~----~ 105 (239)
.|....- +|- . . +....-.+|+.|.. .....|. .
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~ 159 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL 159 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence 4332111 121 0 0 11112235555421 1112332 4
Q ss_pred HHHHHHh-c-CCCceEEEeccCceeccCCCccccHHHHHH---------------------------HHHHHhCCCCCCC
Q 048469 106 LEDLVAS-Y-MPVISYSIHRSSIIIGSSSRSVYNSLLTLD---------------------------VICKVFGVEFVPF 156 (239)
Q Consensus 106 ~e~~l~~-~-~~~~~~~ilRp~~i~G~~~~~~~~~~~~l~---------------------------~ia~~~g~~~~~~ 156 (239)
+|+++.+ . ..++.+++|||+.||||+.......+..++ .+....++....+
T Consensus 160 aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~ 239 (361)
T KOG1430|consen 160 AEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSP 239 (361)
T ss_pred HHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCC
Confidence 6777776 3 356999999999999998765433322222 1222233331111
Q ss_pred C-CCCCCCHHhhcC-cchHHHHHHHHHhCCCCCCCcccccch---------hhhhhhhc-------------cccccccC
Q 048469 157 D-ENDDFDFVGMMK-PKAKVWDEIAEQHGLYNINKLEEITCF---------EALINVLH-------------FGFQHVCS 212 (239)
Q Consensus 157 ~-~~~~~~~~~~~~-~~~~~~~~i~~~~gl~~~~~~~~~~~~---------~~~d~~~~-------------~~~~~~~d 212 (239)
. .|+.+.+..... ...+.|..+.+.+|... ...-.+..| ....+.++ ......+|
T Consensus 240 ~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~-~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~ 318 (361)
T KOG1430|consen 240 SVNGQFYFITDDTPVRFFDFLSPLVKALGYCL-PSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFS 318 (361)
T ss_pred ccCceEEEEeCCCcchhhHHHHHHHHhcCCCC-CceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccC
Confidence 0 233322211111 12235556777777654 211000000 00011111 01246789
Q ss_pred hhHHH-HcCCCCccchHHHHHHHHHHh
Q 048469 213 MNKSR-EFGFFKFADTLKSLGMWVTKL 238 (239)
Q Consensus 213 ~~kar-~lG~~~~~~~~~~~~~~~~~~ 238 (239)
++||+ +|||.|..+.+++..+++..+
T Consensus 319 ~~kA~~~lgY~P~~~~~e~~~~~~~~~ 345 (361)
T KOG1430|consen 319 IEKAKRELGYKPLVSLEEAIQRTIHWV 345 (361)
T ss_pred HHHHHHhhCCCCcCCHHHHHHHHHHHH
Confidence 99997 699999999999999988654
No 39
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.61 E-value=4.3e-14 Score=122.11 Aligned_cols=121 Identities=20% Similarity=0.125 Sum_probs=83.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--CCC----CCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS--WFP----SSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~----~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
|||||||+||++|+++|+ +.|++|+++.|..... ... ..+++ ++.+|++|++++.++++... +++|
T Consensus 3 lV~GatG~iG~~l~~~l~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d~v 74 (328)
T TIGR01179 3 LVTGGAGYIGSHTVRQLL-----ESGHEVVVLDNLSNGSPEALKRGERITRVT-FVEGDLRDRELLDRLFEEHK--IDAV 74 (328)
T ss_pred EEeCCCCHHHHHHHHHHH-----hCCCeEEEEeCCCccchhhhhhhccccceE-EEECCCCCHHHHHHHHHhCC--CcEE
Confidence 699999999999999999 8899999887643211 000 11577 88999999999999887543 7777
Q ss_pred Eccc---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH----H
Q 048469 75 HDPA---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC----A 105 (239)
Q Consensus 75 ~~~a---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~----~ 105 (239)
+|++ .|| .....+++|+++..+ .+.|. .
T Consensus 75 v~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g--~~~~~~~~e~~~~~~-~~~y~~sK~~ 151 (328)
T TIGR01179 75 IHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYG--EPSSIPISEDSPLGP-INPYGRSKLM 151 (328)
T ss_pred EECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcC--CCCCCCccccCCCCC-CCchHHHHHH
Confidence 7665 011 111235677776432 23342 3
Q ss_pred HHHHHHh--cC-CCceEEEeccCceeccCC
Q 048469 106 LEDLVAS--YM-PVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 106 ~e~~l~~--~~-~~~~~~ilRp~~i~G~~~ 132 (239)
.|.++.+ +. .+++++++||+.|||+..
T Consensus 152 ~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 181 (328)
T TIGR01179 152 SERILRDLSKADPGLSYVILRYFNVAGADP 181 (328)
T ss_pred HHHHHHHHHHhccCCCEEEEecCcccCCCC
Confidence 4555554 33 689999999999999854
No 40
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.61 E-value=5.2e-15 Score=126.90 Aligned_cols=209 Identities=17% Similarity=0.131 Sum_probs=113.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
|||||||++|++|+++|. ..||+|++++|+ ..|++|.+++.+.++... +|.|+|++
T Consensus 4 LI~GasG~lG~~l~~~l~-----~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~--pd~Vin~aa~ 61 (286)
T PF04321_consen 4 LITGASGFLGSALARALK-----ERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFK--PDVVINCAAY 61 (286)
T ss_dssp EEETTTSHHHHHHHHHHT-----TTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH----SEEEE----
T ss_pred EEECCCCHHHHHHHHHHh-----hCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhC--CCeEecccee
Confidence 699999999999999999 889999999775 367888888888888765 67787776
Q ss_pred ------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchHHHHHHHHh---c
Q 048469 79 ------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYCALEDLVAS---Y 113 (239)
Q Consensus 79 ------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~~~e~~l~~---~ 113 (239)
+|+ +....|++|++++.|. + .|+..++..| .
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFd--G~~~~~y~E~d~~~P~-~-~YG~~K~~~E~~v~ 137 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFD--GDKGGPYTEDDPPNPL-N-VYGRSKLEGEQAVR 137 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS---SSTSSSB-TTS----S-S-HHHHHHHHHHHHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEc--CCcccccccCCCCCCC-C-HHHHHHHHHHHHHH
Confidence 222 2234578999886432 4 4444444333 1
Q ss_pred CCCceEEEeccCceeccCCCccccHHHHHH--------------------HHHHHhC----CCCCCCCCCCCCCHHh-hc
Q 048469 114 MPVISYSIHRSSIIIGSSSRSVYNSLLTLD--------------------VICKVFG----VEFVPFDENDDFDFVG-MM 168 (239)
Q Consensus 114 ~~~~~~~ilRp~~i~G~~~~~~~~~~~~l~--------------------~ia~~~g----~~~~~~~~~~~~~~~~-~~ 168 (239)
+..-++.|+|++.+||+...++...+.... ++|+.+- ...........+.+.. ..
T Consensus 138 ~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~ 217 (286)
T PF04321_consen 138 AACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPER 217 (286)
T ss_dssp HH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-
T ss_pred HhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcc
Confidence 222389999999999996656555443332 4444321 0000000011122111 00
Q ss_pred CcchHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHHH-cCCCCccchHHHHHHHHHHh
Q 048469 169 KPKAKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSRE-FGFFKFADTLKSLGMWVTKL 238 (239)
Q Consensus 169 ~~~~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar~-lG~~~~~~~~~~~~~~~~~~ 238 (239)
....+....+++..|+.. ..+.....-.+ .....++.+..+|++|+++ +|++ ..+-.+.+.+.++++
T Consensus 218 ~S~~e~~~~i~~~~~~~~-~~i~~~~~~~~-~~~~~rp~~~~L~~~kl~~~~g~~-~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 218 VSRYEFAEAIAKILGLDP-ELIKPVSSSEF-PRAAPRPRNTSLDCRKLKNLLGIK-PPPWREGLEELVKQY 285 (286)
T ss_dssp EEHHHHHHHHHHHHTHCT-TEEEEESSTTS-TTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhCCCC-ceEEecccccC-CCCCCCCCcccccHHHHHHccCCC-CcCHHHHHHHHHHHh
Confidence 122345567777777654 22222111011 1122345678899999997 6986 677888888887764
No 41
>PLN02583 cinnamoyl-CoA reductase
Probab=99.60 E-value=1e-14 Score=125.67 Aligned_cols=66 Identities=8% Similarity=0.032 Sum_probs=52.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-------CC--CCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-------WF--PSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
||||||||||++|+++|+ ++||+|+++.|++... .+ ...+++ ++.+|++|.+++.+++.+++. |
T Consensus 10 lVTGatG~IG~~lv~~Ll-----~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~~~~~l~~~d~-v 82 (297)
T PLN02583 10 CVMDASGYVGFWLVKRLL-----SRGYTVHAAVQKNGETEIEKEIRGLSCEEERLK-VFDVDPLDYHSILDALKGCSG-L 82 (297)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCEEEEEEcCchhhhHHHHHHhcccCCCceE-EEEecCCCHHHHHHHHcCCCE-E
Confidence 699999999999999999 8999999999964211 01 124688 899999999999999987643 4
Q ss_pred eE
Q 048469 72 TH 73 (239)
Q Consensus 72 ~~ 73 (239)
.|
T Consensus 83 ~~ 84 (297)
T PLN02583 83 FC 84 (297)
T ss_pred EE
Confidence 44
No 42
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.59 E-value=1.8e-14 Score=122.83 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=30.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQ 38 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~ 38 (239)
||||||||||++++++|+ +.||+|++++|++..
T Consensus 2 lVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 2 LITGGTGFIGRALTQRLT-----KDGHEVTILTRSPPA 34 (292)
T ss_pred EEEcccchhhHHHHHHHH-----HcCCEEEEEeCCCCC
Confidence 799999999999999999 789999999998653
No 43
>PRK05865 hypothetical protein; Provisional
Probab=99.59 E-value=6.9e-15 Score=141.01 Aligned_cols=217 Identities=17% Similarity=0.200 Sum_probs=118.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPAHS 80 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a~y 80 (239)
||||||||||++|+++|+ .+||+|++++|+..... ..+++ ++.+|++|.+++.+++++ +|+|+|+|.+
T Consensus 4 LVTGATGfIGs~La~~Ll-----~~G~~Vv~l~R~~~~~~--~~~v~-~v~gDL~D~~~l~~al~~----vD~VVHlAa~ 71 (854)
T PRK05865 4 AVTGASGVLGRGLTARLL-----SQGHEVVGIARHRPDSW--PSSAD-FIAADIRDATAVESAMTG----ADVVAHCAWV 71 (854)
T ss_pred EEECCCCHHHHHHHHHHH-----HCcCEEEEEECCchhhc--ccCce-EEEeeCCCHHHHHHHHhC----CCEEEECCCc
Confidence 699999999999999999 88999999999754321 24678 999999999999988874 5678887622
Q ss_pred cCCCCCCC---------C-CCCC-CCCC--CCCcchHHHHHHHHhcCCCceEEEeccCceeccCCCccccHHHH------
Q 048469 81 AHANSHDP---------P-LRED-LSRL--PCQNFYCALEDLVASYMPVISYSIHRSSIIIGSSSRSVYNSLLT------ 141 (239)
Q Consensus 81 g~~~~~~~---------p-~~E~-~~~~--~~~~~y~~~e~~l~~~~~~~~~~ilRp~~i~G~~~~~~~~~~~~------ 141 (239)
... .... . ..+. ..+. .........|+++. ..+++++++||++|||+...+.+..+..
T Consensus 72 ~~~-~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~K~aaE~ll~--~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~ 148 (854)
T PRK05865 72 RGR-NDHINIDGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLA--DCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPA 148 (854)
T ss_pred ccc-hHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHH--HcCCCEEEEEeceEeCCChHHHHHHHhcCceecc
Confidence 100 0000 0 0000 0000 00000223455554 4689999999999999863322111000
Q ss_pred -----------HHHHHHHhC--CCCCCCCCCCCCCHHhhcCcchHHHHHHHHHhCCC--C-CCCccc-ccchhhhhhhhc
Q 048469 142 -----------LDVICKVFG--VEFVPFDENDDFDFVGMMKPKAKVWDEIAEQHGLY--N-INKLEE-ITCFEALINVLH 204 (239)
Q Consensus 142 -----------l~~ia~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gl~--~-~~~~~~-~~~~~~~d~~~~ 204 (239)
..|+|+.+- +..... .+..+++. .+..-.+.++++..+-. + +..... .......+..
T Consensus 149 G~~~~~~dfIhVdDVA~Ai~~aL~~~~~-~ggvyNIg---sg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~-- 222 (854)
T PRK05865 149 GYADRVVQVVHSDDAQRLLVRALLDTVI-DSGPVNLA---APGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELL-- 222 (854)
T ss_pred CCCCceEeeeeHHHHHHHHHHHHhCCCc-CCCeEEEE---CCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcc--
Confidence 015555431 111100 11222221 01111223333332210 0 000110 0000000000
Q ss_pred cccccccChhHHHH-cCCCCccchHHHHHHHHHHhC
Q 048469 205 FGFQHVCSMNKSRE-FGFFKFADTLKSLGMWVTKLR 239 (239)
Q Consensus 205 ~~~~~~~d~~kar~-lG~~~~~~~~~~~~~~~~~~~ 239 (239)
.....+|++|+++ |||++.++.++.+.++++.+|
T Consensus 223 -~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r 257 (854)
T PRK05865 223 -HSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVR 257 (854)
T ss_pred -cCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 1134689999985 999999999999999998764
No 44
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.58 E-value=7.4e-14 Score=118.40 Aligned_cols=120 Identities=16% Similarity=0.034 Sum_probs=89.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC----------CCCCCCceeeEeecCCCchhHHHHHhcccCc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS----------WFPSSAVDHYITFDATNSGNTTEKLSLLFNE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~ 70 (239)
|||||+||||+|.+-+|+ ++||+|++++.=.... ..+..++. ++.+|++|.+.+++.++...
T Consensus 6 LVtGgaGyiGsht~l~L~-----~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~-f~~~Dl~D~~~L~kvF~~~~-- 77 (343)
T KOG1371|consen 6 LVTGGAGYIGSHTVLALL-----KRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVF-FVEGDLNDAEALEKLFSEVK-- 77 (343)
T ss_pred EEecCCcceehHHHHHHH-----hCCCcEEEEecccccchhHHHHHHHhcCCCCceE-EEEeccCCHHHHHHHHhhcC--
Confidence 799999999999999999 8999999986522110 01247899 99999999999999998875
Q ss_pred ceEEEccc---------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH-
Q 048469 71 ITHVHDPA---------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC- 104 (239)
Q Consensus 71 v~~v~~~a---------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~- 104 (239)
+++|.|-| .|| .+...|++|++|...+.+.|.
T Consensus 78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG--~p~~ip~te~~~t~~p~~pyg~ 155 (343)
T KOG1371|consen 78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYG--LPTKVPITEEDPTDQPTNPYGK 155 (343)
T ss_pred CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeec--CcceeeccCcCCCCCCCCcchh
Confidence 78887655 233 233468999998652335554
Q ss_pred ---HHHHHHHh--cCCCceEEEeccCceecc
Q 048469 105 ---ALEDLVAS--YMPVISYSIHRSSIIIGS 130 (239)
Q Consensus 105 ---~~e~~l~~--~~~~~~~~ilRp~~i~G~ 130 (239)
..|+.+.. ...+|..+.||-+.++|.
T Consensus 156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga 186 (343)
T KOG1371|consen 156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGA 186 (343)
T ss_pred hhHHHHHHHHhhhccccceEEEEEeccccCc
Confidence 34554444 344599999999999993
No 45
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.56 E-value=8.1e-14 Score=117.62 Aligned_cols=206 Identities=15% Similarity=0.137 Sum_probs=127.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
||||++|.+|++|++.|. .+++|++++|.. +|++|++.+.+.++... +|.|+++|
T Consensus 4 Li~G~~GqLG~~L~~~l~------~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~--PDvVIn~AAy 60 (281)
T COG1091 4 LITGANGQLGTELRRALP------GEFEVIATDRAE---------------LDITDPDAVLEVIRETR--PDVVINAAAY 60 (281)
T ss_pred EEEcCCChHHHHHHHHhC------CCceEEeccCcc---------------ccccChHHHHHHHHhhC--CCEEEECccc
Confidence 799999999999998775 568999998752 68999999999998875 78888876
Q ss_pred -----------------------------cccC-----------CCCCCCCCCCCCCCCCCCcchHHHHHHHHh---cCC
Q 048469 79 -----------------------------HSAH-----------ANSHDPPLREDLSRLPCQNFYCALEDLVAS---YMP 115 (239)
Q Consensus 79 -----------------------------~yg~-----------~~~~~~p~~E~~~~~~~~~~y~~~e~~l~~---~~~ 115 (239)
.+|. .+....|+.|++++. |..+|++.+++.| +..
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~--P~nvYG~sKl~GE~~v~~~ 138 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPN--PLNVYGRSKLAGEEAVRAA 138 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCC--ChhhhhHHHHHHHHHHHHh
Confidence 0110 022246899999864 3347777777777 455
Q ss_pred CceEEEeccCceeccCCCccccHHHHHH--------------------HHHHHhCC-CCCCCCCCCCCCHHhhcCcc---
Q 048469 116 VISYSIHRSSIIIGSSSRSVYNSLLTLD--------------------VICKVFGV-EFVPFDENDDFDFVGMMKPK--- 171 (239)
Q Consensus 116 ~~~~~ilRp~~i~G~~~~~~~~~~~~l~--------------------~ia~~~g~-~~~~~~~~~~~~~~~~~~~~--- 171 (239)
+-+..|+|.+++||....|+...+..++ ++|+..-. -.... .+..+ +...+.
T Consensus 139 ~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~-~~~~y---H~~~~g~~S 214 (281)
T COG1091 139 GPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK-EGGVY---HLVNSGECS 214 (281)
T ss_pred CCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc-cCcEE---EEeCCCccc
Confidence 6789999999999998767665555554 45544311 00000 01111 111111
Q ss_pred -hHHHHHHHHHhCCCCCCCcccccchhhhhhhhccccccccChhHHHH-cCCCCccchHHHHHHHHHHh
Q 048469 172 -AKVWDEIAEQHGLYNINKLEEITCFEALINVLHFGFQHVCSMNKSRE-FGFFKFADTLKSLGMWVTKL 238 (239)
Q Consensus 172 -~~~~~~i~~~~gl~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~kar~-lG~~~~~~~~~~~~~~~~~~ 238 (239)
-+..+.|.+..+... ........ .-......+|.++.+|+.|+++ +|+ ..++-.+.+.+.++++
T Consensus 215 wydfa~~I~~~~~~~~-~v~~~~~~-~~~~~~a~RP~~S~L~~~k~~~~~g~-~~~~w~~~l~~~~~~~ 280 (281)
T COG1091 215 WYEFAKAIFEEAGVDG-EVIEPIAS-AEYPTPAKRPANSSLDTKKLEKAFGL-SLPEWREALKALLDEL 280 (281)
T ss_pred HHHHHHHHHHHhCCCc-cccccccc-cccCccCCCCcccccchHHHHHHhCC-CCccHHHHHHHHHhhc
Confidence 223345666666432 11100000 0112233455678999999986 666 4555566666655543
No 46
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.55 E-value=9.6e-14 Score=115.49 Aligned_cols=221 Identities=13% Similarity=0.017 Sum_probs=127.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEec---CCCC----CCCCCCCceeeEeecCCCchhHHHHHhcccCcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAW---CPKQ----SWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R---~~~~----~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~ 73 (239)
|||||.||||++.++.+.. +. ..+..+.+.- .... .....++.+ ++.+|+.+...+...+..-. +++
T Consensus 10 lItgg~gfi~Sn~~~~~~~-~~--p~~~~v~idkL~~~s~~~~l~~~~n~p~yk-fv~~di~~~~~~~~~~~~~~--id~ 83 (331)
T KOG0747|consen 10 LITGGAGFIGSNFINYLVD-KY--PDYKFVNLDKLDYCSNLKNLEPVRNSPNYK-FVEGDIADADLVLYLFETEE--IDT 83 (331)
T ss_pred EEecCcCcchhhhhhhccc-CC--CCCcEEEEeecccccccchhhhhccCCCce-EeeccccchHHHHhhhccCc--hhh
Confidence 6999999999999999982 11 2344443322 1111 111357889 99999999888777776432 777
Q ss_pred EEccc----------------------------------------------cccCCCCCCCCCCCCCCCCCCCcchH---
Q 048469 74 VHDPA----------------------------------------------HSAHANSHDPPLREDLSRLPCQNFYC--- 104 (239)
Q Consensus 74 v~~~a----------------------------------------------~yg~~~~~~~p~~E~~~~~~~~~~y~--- 104 (239)
|+|-| +||.... .....|...+. +.|.|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~-~~~~~E~s~~n-PtnpyAasK 161 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDE-DAVVGEASLLN-PTNPYAASK 161 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccc-cccccccccCC-CCCchHHHH
Confidence 76544 4552111 11112555443 335564
Q ss_pred -HHHHHHHh--cCCCceEEEeccCceeccCCCccccHHH---HHH----------------------HHHHHhCC--CCC
Q 048469 105 -ALEDLVAS--YMPVISYSIHRSSIIIGSSSRSVYNSLL---TLD----------------------VICKVFGV--EFV 154 (239)
Q Consensus 105 -~~e~~l~~--~~~~~~~~ilRp~~i~G~~~~~~~~~~~---~l~----------------------~ia~~~g~--~~~ 154 (239)
+.|..++. +..+++++++|.++||||+... ..++. .++ |++.+|-. +..
T Consensus 162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~-~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg 240 (331)
T KOG0747|consen 162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP-EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG 240 (331)
T ss_pred HHHHHHHHHHhhccCCcEEEEeccCccCCCcCh-HHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC
Confidence 45666666 7789999999999999998642 22222 222 66666532 112
Q ss_pred CCCCCCCCCHHhhc-CcchHHHHHHHHHhCC--CC--CCCccc-ccchhhhhhhhccccccccChhHHHHcCCCCccchH
Q 048469 155 PFDENDDFDFVGMM-KPKAKVWDEIAEQHGL--YN--INKLEE-ITCFEALINVLHFGFQHVCSMNKSREFGFFKFADTL 228 (239)
Q Consensus 155 ~~~~~~~~~~~~~~-~~~~~~~~~i~~~~gl--~~--~~~~~~-~~~~~~~d~~~~~~~~~~~d~~kar~lG~~~~~~~~ 228 (239)
. .|+.+++..-. ....++...|++.... .+ ..++.. +...++.|. ...+|.+|+|+|||++.++-+
T Consensus 241 ~--~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~------Ry~~~~eKik~LGw~~~~p~~ 312 (331)
T KOG0747|consen 241 E--LGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDL------RYFLDDEKIKKLGWRPTTPWE 312 (331)
T ss_pred C--ccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccc------cccccHHHHHhcCCcccCcHH
Confidence 2 24555543211 1122233333333221 11 011110 111122222 257899999999999999999
Q ss_pred HHHHHHHHHh
Q 048469 229 KSLGMWVTKL 238 (239)
Q Consensus 229 ~~~~~~~~~~ 238 (239)
+.++.+++.|
T Consensus 313 eGLrktie~y 322 (331)
T KOG0747|consen 313 EGLRKTIEWY 322 (331)
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 47
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.55 E-value=2.4e-13 Score=113.21 Aligned_cols=115 Identities=16% Similarity=0.103 Sum_probs=74.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC------CCCCCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQ------SWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
+||||.||||+|||+.|. .+||+|++++.--.. .+...+.++ .+.-|+..+ .+.+ ||++
T Consensus 31 ~itGgaGFIgSHLvdkLm-----~egh~VIa~Dn~ftg~k~n~~~~~~~~~fe-l~~hdv~~p-----l~~e----vD~I 95 (350)
T KOG1429|consen 31 LITGGAGFIGSHLVDKLM-----TEGHEVIALDNYFTGRKENLEHWIGHPNFE-LIRHDVVEP-----LLKE----VDQI 95 (350)
T ss_pred EEecCcchHHHHHHHHHH-----hcCCeEEEEecccccchhhcchhccCccee-EEEeechhH-----HHHH----hhhh
Confidence 589999999999999999 889999999764321 122345566 666666544 4443 4555
Q ss_pred Eccc--------------------------------------------cccCCCCCCCCCCCCCCCC--C-CCcchHH--
Q 048469 75 HDPA--------------------------------------------HSAHANSHDPPLREDLSRL--P-CQNFYCA-- 105 (239)
Q Consensus 75 ~~~a--------------------------------------------~yg~~~~~~~p~~E~~~~~--~-~~~~y~~-- 105 (239)
+|.| +||. +...|..|+.... | .|..-|.
T Consensus 96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgd--p~~hpq~e~ywg~vnpigpr~cydeg 173 (350)
T KOG1429|consen 96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGD--PLVHPQVETYWGNVNPIGPRSCYDEG 173 (350)
T ss_pred hhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCC--cccCCCccccccccCcCCchhhhhHH
Confidence 5544 4552 3345555554321 1 1112232
Q ss_pred ---HHHHHHh--cCCCceEEEeccCceeccCC
Q 048469 106 ---LEDLVAS--YMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 106 ---~e~~l~~--~~~~~~~~ilRp~~i~G~~~ 132 (239)
.|.++.. ++.|+...|.|+.+.|||.-
T Consensus 174 Kr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 174 KRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred HHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 4555444 77899999999999999964
No 48
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.54 E-value=1.7e-14 Score=125.81 Aligned_cols=68 Identities=15% Similarity=0.120 Sum_probs=53.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhcccCcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~ 73 (239)
||||||||||++|+++|+ ..| ++|++++|+.... .....+++ ++.+|++|++.+.+++++ +|.
T Consensus 8 LVTGatG~IG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~~~~----iD~ 77 (324)
T TIGR03589 8 LITGGTGSFGKAFISRLL-----ENYNPKKIIIYSRDELKQWEMQQKFPAPCLR-FFIGDVRDKERLTRALRG----VDY 77 (324)
T ss_pred EEeCCCCHHHHHHHHHHH-----HhCCCcEEEEEcCChhHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHhc----CCE
Confidence 699999999999999999 554 7899999875421 11124678 999999999999998875 567
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
|+|+|
T Consensus 78 Vih~A 82 (324)
T TIGR03589 78 VVHAA 82 (324)
T ss_pred EEECc
Confidence 77766
No 49
>PLN02686 cinnamoyl-CoA reductase
Probab=99.53 E-value=6.2e-14 Score=124.30 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=49.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----C--------CCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----F--------PSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~--------~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
||||||||||++|+++|+ ++||+|+++.|+..... + ...+++ ++.+|++|++++.+++.+++
T Consensus 57 LVTGatGfIG~~lv~~L~-----~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~i~~~d 130 (367)
T PLN02686 57 CVTGGVSFLGLAIVDRLL-----RHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIW-TVMANLTEPESLHEAFDGCA 130 (367)
T ss_pred EEECCchHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceE-EEEcCCCCHHHHHHHHHhcc
Confidence 699999999999999999 88999999888643210 0 013578 89999999999999998653
No 50
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.51 E-value=2.7e-14 Score=113.98 Aligned_cols=67 Identities=19% Similarity=0.165 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+|+||||++|++|+++|+ ++||+|++++|++.+... .++++ ++.+|+.|++++.++++++ ++|++++
T Consensus 2 ~V~GatG~vG~~l~~~L~-----~~~~~V~~~~R~~~~~~~-~~~~~-~~~~d~~d~~~~~~al~~~----d~vi~~~ 68 (183)
T PF13460_consen 2 LVFGATGFVGRALAKQLL-----RRGHEVTALVRSPSKAED-SPGVE-IIQGDLFDPDSVKAALKGA----DAVIHAA 68 (183)
T ss_dssp EEETTTSHHHHHHHHHHH-----HTTSEEEEEESSGGGHHH-CTTEE-EEESCTTCHHHHHHHHTTS----SEEEECC
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEecCchhccc-ccccc-cceeeehhhhhhhhhhhhc----chhhhhh
Confidence 699999999999999999 788999999999764321 47899 9999999999999999965 5566554
No 51
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.41 E-value=2.4e-13 Score=118.09 Aligned_cols=68 Identities=10% Similarity=0.072 Sum_probs=55.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
||||||||||++|+++|+ ++||+|++++|++.... ....+++ ++.+|++|++++.++++++ |.|+|++
T Consensus 4 lVtGatG~iG~~lv~~Ll-----~~g~~V~~l~R~~~~~~~l~~~~v~-~v~~Dl~d~~~l~~al~g~----d~Vi~~~ 72 (317)
T CHL00194 4 LVIGATGTLGRQIVRQAL-----DEGYQVRCLVRNLRKASFLKEWGAE-LVYGDLSLPETLPPSFKGV----TAIIDAS 72 (317)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCeEEEEEcChHHhhhHhhcCCE-EEECCCCCHHHHHHHHCCC----CEEEECC
Confidence 699999999999999999 88999999999864321 1235789 9999999999999999865 4555543
No 52
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.38 E-value=1.3e-11 Score=102.76 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS 39 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~ 39 (239)
+|||||||||++|+.+|. ..||+|+.++|+++..
T Consensus 2 liTGgTGlIG~~L~~~L~-----~~gh~v~iltR~~~~~ 35 (297)
T COG1090 2 LITGGTGLIGRALTARLR-----KGGHQVTILTRRPPKA 35 (297)
T ss_pred eEeccccchhHHHHHHHH-----hCCCeEEEEEcCCcch
Confidence 699999999999999999 8999999999998643
No 53
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.29 E-value=3.9e-12 Score=106.86 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=42.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCc--EEEEEecCCCCC--------CC------------CCCCceeeEeecCCCch-
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPW--EVYGSAWCPKQS--------WF------------PSSAVDHYITFDATNSG- 58 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~--------~~------------~~~~v~~~~~~Dl~d~~- 58 (239)
|||||||+|++|+++|+ ..+. +|+++.|..... .+ ...+++ ++.+|++++.
T Consensus 1 lTGaTGflG~~ll~~Ll-----~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~-~v~GDl~~~~l 74 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELL-----RQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIE-VVEGDLSQPNL 74 (249)
T ss_dssp EE-TTSHHHHHHHHHHH-----HHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEE-EEE--TTSGGG
T ss_pred CcCCCcHHHHHHHHHHH-----cCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEE-EEecccccccc
Confidence 79999999999999999 4554 999999976320 00 157899 9999999864
Q ss_pred -----hHHHHHhcccCcceEEEccc
Q 048469 59 -----NTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 59 -----~~~~~l~~~~~~v~~v~~~a 78 (239)
.+....+. +++|+|+|
T Consensus 75 GL~~~~~~~L~~~----v~~IiH~A 95 (249)
T PF07993_consen 75 GLSDEDYQELAEE----VDVIIHCA 95 (249)
T ss_dssp G--HHHHHHHHHH------EEEE--
T ss_pred CCChHHhhccccc----cceeeecc
Confidence 23333332 77888887
No 54
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.1e-11 Score=117.49 Aligned_cols=119 Identities=21% Similarity=0.186 Sum_probs=76.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCch------hHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSG------NTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~------~~~~~l~~~ 67 (239)
||||||||||++|+++|+++ ..|++|++++|++.... ....+++ ++.+|++|++ .+++ +.
T Consensus 4 LVTGatGfIG~~lv~~Ll~~---~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~~-l~-- 76 (657)
T PRK07201 4 FVTGGTGFIGRRLVSRLLDR---RREATVHVLVRRQSLSRLEALAAYWGADRVV-PLVGDLTEPGLGLSEADIAE-LG-- 76 (657)
T ss_pred EEeCCccHHHHHHHHHHHhc---CCCCEEEEEECcchHHHHHHHHHhcCCCcEE-EEecccCCccCCcCHHHHHH-hc--
Confidence 69999999999999999820 36899999999653211 0125688 9999999853 3333 22
Q ss_pred cCcceEEEccc------------------------------------------cccCCCCCCCCCCCCCCCC--CCCcch
Q 048469 68 FNEITHVHDPA------------------------------------------HSAHANSHDPPLREDLSRL--PCQNFY 103 (239)
Q Consensus 68 ~~~v~~v~~~a------------------------------------------~yg~~~~~~~p~~E~~~~~--~~~~~y 103 (239)
+ +|+|||++ +|| ....+.+|+.... ...+.|
T Consensus 77 -~-~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g---~~~~~~~e~~~~~~~~~~~~Y 151 (657)
T PRK07201 77 -D-IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAG---DYEGVFREDDFDEGQGLPTPY 151 (657)
T ss_pred -C-CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecccccc---CccCccccccchhhcCCCCch
Confidence 3 67788776 111 1122344543211 122334
Q ss_pred H----HHHHHHHhcCCCceEEEeccCceeccCC
Q 048469 104 C----ALEDLVASYMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 104 ~----~~e~~l~~~~~~~~~~ilRp~~i~G~~~ 132 (239)
. ..|+++.+ ..+++++|+||+.|||++.
T Consensus 152 ~~sK~~~E~~~~~-~~g~~~~ilRp~~v~G~~~ 183 (657)
T PRK07201 152 HRTKFEAEKLVRE-ECGLPWRVYRPAVVVGDSR 183 (657)
T ss_pred HHHHHHHHHHHHH-cCCCcEEEEcCCeeeecCC
Confidence 2 34555543 5689999999999999864
No 55
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.26 E-value=9.7e-12 Score=111.15 Aligned_cols=72 Identities=13% Similarity=0.012 Sum_probs=57.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhcccCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLFNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v 71 (239)
|||||||+||++++++|+ ++||+|++++|++.... ...++++ ++.+|++|++++.+++++....+
T Consensus 64 LVtGatG~IG~~l~~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 64 LVVGATGYIGKFVVRELV-----RRGYNVVAVAREKSGIRGKNGKEDTKKELPGAE-VVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEEechhhccccchhhHHhhhcCCce-EEEeeCCCHHHHHHHHHHhCCCC
Confidence 699999999999999999 88999999999763210 0124788 99999999999999998642127
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
|+|++++
T Consensus 138 D~Vi~~a 144 (390)
T PLN02657 138 DVVVSCL 144 (390)
T ss_pred cEEEECC
Confidence 7888765
No 56
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.24 E-value=7.6e-10 Score=92.57 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=57.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----------CCCCCceeeEeecCCCchhHHHHHhcccC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----------FPSSAVDHYITFDATNSGNTTEKLSLLFN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~ 69 (239)
||||-||+-|++|++.|+ ..||+|+++.|+..... ..+.+++ .+.+||+|...+.++++.++
T Consensus 6 LITGITGQDGsYLa~lLL-----ekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~-l~~gDLtD~~~l~r~l~~v~- 78 (345)
T COG1089 6 LITGITGQDGSYLAELLL-----EKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLH-LHYGDLTDSSNLLRILEEVQ- 78 (345)
T ss_pred EEecccCCchHHHHHHHH-----hcCcEEEEEeeccccCCcccceeccccccCCceeE-EEeccccchHHHHHHHHhcC-
Confidence 799999999999999999 89999999999854211 1244577 89999999999999999886
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
++.|++.+
T Consensus 79 -PdEIYNLa 86 (345)
T COG1089 79 -PDEIYNLA 86 (345)
T ss_pred -chhheecc
Confidence 67776654
No 57
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=3.2e-10 Score=91.89 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=74.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA-- 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a-- 78 (239)
||||++|.+|++|++.+. .+|.+ ...|. =+. .-.+||++.++.++.++... ++||++.|
T Consensus 5 lVtGg~GLVGsAi~~vv~-----~q~~~--------~e~wv---f~~-skd~DLt~~a~t~~lF~~ek--PthVIhlAAm 65 (315)
T KOG1431|consen 5 LVTGGTGLVGSAIVKVVQ-----EQGFD--------DENWV---FIG-SKDADLTNLADTRALFESEK--PTHVIHLAAM 65 (315)
T ss_pred EEecCCchHHHHHHHHHH-----hcCCC--------CcceE---Eec-cccccccchHHHHHHHhccC--CceeeehHhh
Confidence 699999999999999998 55431 00110 001 23589999999999998775 89998876
Q ss_pred ----------------------------cc--c--C--------CCCC--CCCCCCCCCCC---CCCcchHHHHHHHHh-
Q 048469 79 ----------------------------HS--A--H--------ANSH--DPPLREDLSRL---PCQNFYCALEDLVAS- 112 (239)
Q Consensus 79 ----------------------------~y--g--~--------~~~~--~~p~~E~~~~~---~~~~~y~~~e~~l~~- 112 (239)
.| | + +.|. ..|++|+.-.. .+.|+.|+..+.+..
T Consensus 66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv 145 (315)
T KOG1431|consen 66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV 145 (315)
T ss_pred hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence 01 1 0 0111 24788876422 233666654443221
Q ss_pred ------cCCCceEEEeccCceeccCCC
Q 048469 113 ------YMPVISYSIHRSSIIIGSSSR 133 (239)
Q Consensus 113 ------~~~~~~~~ilRp~~i~G~~~~ 133 (239)
.+.|+.++.+-|.++|||.+.
T Consensus 146 ~n~aY~~qhg~~~tsviPtNvfGphDN 172 (315)
T KOG1431|consen 146 QNQAYRQQHGRDYTSVIPTNVFGPHDN 172 (315)
T ss_pred HHHHHHHHhCCceeeeccccccCCCCC
Confidence 467999999999999999763
No 58
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=1.5e-10 Score=100.53 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=80.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---------------C--CCCCCceeeEeecCCCch-----
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---------------W--FPSSAVDHYITFDATNSG----- 58 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~~~~v~~~~~~Dl~d~~----- 58 (239)
|+||||||+|++|+.+|+. +..-+|+++.|....+ | ....+|+ .+.+|+..++
T Consensus 4 lLTGATGFLG~yLl~eLL~----~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~-vv~gDl~e~~lGL~~ 78 (382)
T COG3320 4 LLTGATGFLGAYLLLELLD----RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVE-VVAGDLAEPDLGLSE 78 (382)
T ss_pred EEecCchHhHHHHHHHHHh----cCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEE-EEecccccccCCCCH
Confidence 6899999999999999993 2335899999976521 0 1246899 9999999653
Q ss_pred -hHHHHHhcccCcceEEEccc---------------------------cccCC-----------------CCCCCCCCCC
Q 048469 59 -NTTEKLSLLFNEITHVHDPA---------------------------HSAHA-----------------NSHDPPLRED 93 (239)
Q Consensus 59 -~~~~~l~~~~~~v~~v~~~a---------------------------~yg~~-----------------~~~~~p~~E~ 93 (239)
.+.+..+ . ||+|+|++ .-|+. .....-.+|+
T Consensus 79 ~~~~~La~---~-vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~ 154 (382)
T COG3320 79 RTWQELAE---N-VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI 154 (382)
T ss_pred HHHHHHhh---h-cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence 3333333 2 78888877 01110 0001111222
Q ss_pred CCCC----CCCcch----HHHHHHHHh-cCCCceEEEeccCceeccCCCcccc
Q 048469 94 LSRL----PCQNFY----CALEDLVAS-YMPVISYSIHRSSIIIGSSSRSVYN 137 (239)
Q Consensus 94 ~~~~----~~~~~y----~~~e~~l~~-~~~~~~~~ilRp~~i~G~~~~~~~~ 137 (239)
.+.. ...+-| +..|.++++ ...|++++|+||+.|.|.+..+.+|
T Consensus 155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n 207 (382)
T COG3320 155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALN 207 (382)
T ss_pred cccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccc
Confidence 2211 111223 356777777 4459999999999999998755444
No 59
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.18 E-value=1.2e-10 Score=101.92 Aligned_cols=68 Identities=7% Similarity=0.079 Sum_probs=49.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCCCC----C---------C---C-C-CCceeeEeecCCCc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPKQS----W---------F---P-S-SAVDHYITFDATNS--- 57 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----~---------~---~-~-~~v~~~~~~Dl~d~--- 57 (239)
||||||||||++|+++|+ ..| ++|+++.|+.... . + . . .+++ ++.+|++++
T Consensus 3 lvtGatG~lG~~l~~~L~-----~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~g 76 (367)
T TIGR01746 3 LLTGATGFLGAYLLEELL-----RRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIE-VVAGDLSEPRLG 76 (367)
T ss_pred EEeccchHHHHHHHHHHH-----hCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEE-EEeCCcCcccCC
Confidence 699999999999999999 777 6799999976421 0 0 0 1 4788 999999865
Q ss_pred ---hhHHHHHhcccCcceEEEccc
Q 048469 58 ---GNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 58 ---~~~~~~l~~~~~~v~~v~~~a 78 (239)
+.+.....+ +++|+|++
T Consensus 77 l~~~~~~~~~~~----~d~vih~a 96 (367)
T TIGR01746 77 LSDAEWERLAEN----VDTIVHNG 96 (367)
T ss_pred cCHHHHHHHHhh----CCEEEeCC
Confidence 334444432 66777765
No 60
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.17 E-value=8.9e-11 Score=100.23 Aligned_cols=70 Identities=13% Similarity=0.039 Sum_probs=55.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc--Cc-ceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF--NE-ITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--~~-v~~v~~~ 77 (239)
|||||||+||++++++|+ +.||+|++++|++.... ..+++ .+.+|+.|++++.++++..+ .. ++.+|++
T Consensus 3 lVtGatG~iG~~vv~~L~-----~~g~~V~~~~R~~~~~~--~~~~~-~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 3 LLTGGTGKTASRIARLLQ-----AASVPFLVASRSSSSSA--GPNEK-HVKFDWLDEDTWDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred EEEcCCChHHHHHHHHHH-----hCCCcEEEEeCCCcccc--CCCCc-cccccCCCHHHHHHHHhcccCcCCceeEEEEe
Confidence 699999999999999999 78999999999875432 35778 88999999999999995321 11 4566655
Q ss_pred c
Q 048469 78 A 78 (239)
Q Consensus 78 a 78 (239)
+
T Consensus 75 ~ 75 (285)
T TIGR03649 75 A 75 (285)
T ss_pred C
Confidence 4
No 61
>PLN02996 fatty acyl-CoA reductase
Probab=99.11 E-value=3.8e-10 Score=103.68 Aligned_cols=68 Identities=18% Similarity=0.081 Sum_probs=47.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC---cEEEEEecCCCCCC----C------------------------CCCCceee
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP---WEVYGSAWCPKQSW----F------------------------PSSAVDHY 49 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g---~~V~~l~R~~~~~~----~------------------------~~~~v~~~ 49 (239)
||||||||+|++|++.|+ ..+ -+|+++.|...... + ...+++ +
T Consensus 15 lvTGaTGFlG~~ll~~LL-----~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~-~ 88 (491)
T PLN02996 15 LVTGATGFLAKIFVEKIL-----RVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT-P 88 (491)
T ss_pred EEeCCCcHHHHHHHHHHH-----hhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE-E
Confidence 699999999999999988 332 36999999653211 0 015788 9
Q ss_pred EeecCCCc-------hhHHHHHhcccCcceEEEccc
Q 048469 50 ITFDATNS-------GNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 50 ~~~Dl~d~-------~~~~~~l~~~~~~v~~v~~~a 78 (239)
+.+|++++ +.+.+++++ +++|+|+|
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~----vD~ViH~A 120 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKE----IDIVVNLA 120 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhC----CCEEEECc
Confidence 99999843 345555553 56777776
No 62
>PRK12320 hypothetical protein; Provisional
Probab=99.10 E-value=3.8e-10 Score=106.64 Aligned_cols=114 Identities=19% Similarity=0.124 Sum_probs=75.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPAHS 80 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a~y 80 (239)
||||||||||++|+++|+ ++||+|++++|.+... ..++++ ++.+|++|+. +.+++.+ +|.|+|++..
T Consensus 4 LVTGAaGFIGs~La~~Ll-----~~G~~Vi~ldr~~~~~--~~~~ve-~v~~Dl~d~~-l~~al~~----~D~VIHLAa~ 70 (699)
T PRK12320 4 LVTDATGAVGRSVTRQLI-----AAGHTVSGIAQHPHDA--LDPRVD-YVCASLRNPV-LQELAGE----ADAVIHLAPV 70 (699)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCEEEEEeCChhhc--ccCCce-EEEccCCCHH-HHHHhcC----CCEEEEcCcc
Confidence 699999999999999999 8899999999975432 235788 9999999984 6666664 4556665511
Q ss_pred c--------------------CCCCCCCCCCCCCCCCCCCcchHHHHHHHHhcCCCceEEEeccCceeccCC
Q 048469 81 A--------------------HANSHDPPLREDLSRLPCQNFYCALEDLVASYMPVISYSIHRSSIIIGSSS 132 (239)
Q Consensus 81 g--------------------~~~~~~~p~~E~~~~~~~~~~y~~~e~~l~~~~~~~~~~ilRp~~i~G~~~ 132 (239)
. +.+..-.-++... ..+..|...|.++. ..+++++|+|++++||++.
T Consensus 71 ~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~---G~~~~~~~aE~ll~--~~~~p~~ILR~~nVYGp~~ 137 (699)
T PRK12320 71 DTSAPGGVGITGLAHVANAAARAGARLLFVSQAA---GRPELYRQAETLVS--TGWAPSLVIRIAPPVGRQL 137 (699)
T ss_pred CccchhhHHHHHHHHHHHHHHHcCCeEEEEECCC---CCCccccHHHHHHH--hcCCCEEEEeCceecCCCC
Confidence 0 0000000001110 01122445676665 3568999999999999854
No 63
>PLN02778 3,5-epimerase/4-reductase
Probab=99.09 E-value=1.9e-09 Score=92.96 Aligned_cols=29 Identities=3% Similarity=-0.093 Sum_probs=25.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEec
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAW 34 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R 34 (239)
||||||||||++|+++|+ .+||+|+...+
T Consensus 13 LVtG~tGfiG~~l~~~L~-----~~g~~V~~~~~ 41 (298)
T PLN02778 13 LIYGKTGWIGGLLGKLCQ-----EQGIDFHYGSG 41 (298)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCEEEEecC
Confidence 699999999999999999 88999986543
No 64
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.08 E-value=6.6e-10 Score=87.38 Aligned_cols=61 Identities=13% Similarity=-0.000 Sum_probs=53.4
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFN 69 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~ 69 (239)
|+||||-+|+.|+++++ .+||+|+++.|++.... ..+++. .++.|+.|++++++.+.+.+.
T Consensus 5 iIgAsG~~Gs~i~~EA~-----~RGHeVTAivRn~~K~~-~~~~~~-i~q~Difd~~~~a~~l~g~Da 65 (211)
T COG2910 5 IIGASGKAGSRILKEAL-----KRGHEVTAIVRNASKLA-ARQGVT-ILQKDIFDLTSLASDLAGHDA 65 (211)
T ss_pred EEecCchhHHHHHHHHH-----hCCCeeEEEEeChHhcc-ccccce-eecccccChhhhHhhhcCCce
Confidence 89999999999999999 89999999999986432 126777 899999999999999998864
No 65
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.05 E-value=7.6e-10 Score=92.92 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=51.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeecCCCc-hhHHHHH-hcccCcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---WFPSSAVDHYITFDATNS-GNTTEKL-SLLFNEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~~Dl~d~-~~~~~~l-~~~~~~v~~v~ 75 (239)
|||||||+||++|+++|+ ..||+|++++|++... .....+++ ++.+|++|. +++.+++ .+ ++.||
T Consensus 21 lItGasG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~l~~~~~~~----~d~vi 90 (251)
T PLN00141 21 FVAGATGRTGKRIVEQLL-----AKGFAVKAGVRDVDKAKTSLPQDPSLQ-IVRADVTEGSDKLVEAIGDD----SDAVI 90 (251)
T ss_pred EEECCCcHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhcccCCceE-EEEeeCCCCHHHHHHHhhcC----CCEEE
Confidence 699999999999999999 7899999999986431 11124688 999999984 6666666 33 56666
Q ss_pred ccc
Q 048469 76 DPA 78 (239)
Q Consensus 76 ~~a 78 (239)
+++
T Consensus 91 ~~~ 93 (251)
T PLN00141 91 CAT 93 (251)
T ss_pred ECC
Confidence 554
No 66
>PRK09135 pteridine reductase; Provisional
Probab=99.04 E-value=8.3e-10 Score=91.75 Aligned_cols=72 Identities=8% Similarity=0.077 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---------WFPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||++++++|+ +.|++|++++|+.... ......+. ++.+|++|.+++.++++.+.
T Consensus 10 lItGa~g~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 10 LITGGARRIGAAIARTLH-----AAGYRVAIHYHRSAAEADALAAELNALRPGSAA-ALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceE-EEEcCCCCHHHHHHHHHHHHHHc
Confidence 699999999999999999 8899999999874321 00123467 89999999999888877541
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
..+++|+|++
T Consensus 84 ~~~d~vi~~a 93 (249)
T PRK09135 84 GRLDALVNNA 93 (249)
T ss_pred CCCCEEEECC
Confidence 1278888887
No 67
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.03 E-value=7.6e-11 Score=97.82 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=51.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---FPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
+||||||.+|+++++.|+ +.+++|+++.|++.... +...+++ .+.+|+.|++++.+++++++
T Consensus 2 ~V~GatG~~G~~v~~~L~-----~~~~~V~~l~R~~~~~~~~~l~~~g~~-vv~~d~~~~~~l~~al~g~d 66 (233)
T PF05368_consen 2 LVTGATGNQGRSVVRALL-----SAGFSVRALVRDPSSDRAQQLQALGAE-VVEADYDDPESLVAALKGVD 66 (233)
T ss_dssp EEETTTSHHHHHHHHHHH-----HTTGCEEEEESSSHHHHHHHHHHTTTE-EEES-TT-HHHHHHHHTTCS
T ss_pred EEECCccHHHHHHHHHHH-----hCCCCcEEEEeccchhhhhhhhcccce-EeecccCCHHHHHHHHcCCc
Confidence 699999999999999999 78999999999874211 1246788 89999999999999999864
No 68
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.91 E-value=7.6e-09 Score=96.71 Aligned_cols=69 Identities=9% Similarity=0.086 Sum_probs=47.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc---EEEEEecCCCCC--------C-C-------------------CCCCceee
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW---EVYGSAWCPKQS--------W-F-------------------PSSAVDHY 49 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~---~V~~l~R~~~~~--------~-~-------------------~~~~v~~~ 49 (239)
||||||||+|.+|++.|+ ..+. +|+++.|..... . . ...++. +
T Consensus 123 lVTGaTGFLGk~LlekLL-----r~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~-~ 196 (605)
T PLN02503 123 LITGATGFLAKVLIEKIL-----RTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV-P 196 (605)
T ss_pred EEcCCchHHHHHHHHHHH-----HhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE-E
Confidence 699999999999999999 4432 789999964311 0 0 024678 8
Q ss_pred EeecCCCch-----hHHHHHhcccCcceEEEccc
Q 048469 50 ITFDATNSG-----NTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 50 ~~~Dl~d~~-----~~~~~l~~~~~~v~~v~~~a 78 (239)
+.+|+++++ +..+.+.. . ++.|||+|
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~--~-vDiVIH~A 227 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK--E-VDVIINSA 227 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh--c-CCEEEECc
Confidence 999999972 33333432 2 67777776
No 69
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.90 E-value=3.3e-09 Score=97.91 Aligned_cols=68 Identities=12% Similarity=0.072 Sum_probs=53.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-----------CCCCceeeEeecCCCchhHHHHH
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-----------PSSAVDHYITFDATNSGNTTEKL 64 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-----------~~~~v~~~~~~Dl~d~~~~~~~l 64 (239)
|||||+|+||++++++|+ ..|++|++++|+..... . ...+++ ++.+|++|.+++.+++
T Consensus 84 LVTGATGgIG~aLAr~LL-----k~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~-iV~gDLtD~esI~~aL 157 (576)
T PLN03209 84 FVAGATGKVGSRTVRELL-----KLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLE-IVECDLEKPDQIGPAL 157 (576)
T ss_pred EEECCCCHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceE-EEEecCCCHHHHHHHh
Confidence 699999999999999999 88999999999754210 0 013578 8999999999998888
Q ss_pred hcccCcceEEEccc
Q 048469 65 SLLFNEITHVHDPA 78 (239)
Q Consensus 65 ~~~~~~v~~v~~~a 78 (239)
.++ +.||+++
T Consensus 158 ggi----DiVVn~A 167 (576)
T PLN03209 158 GNA----SVVICCI 167 (576)
T ss_pred cCC----CEEEEcc
Confidence 754 4555554
No 70
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.88 E-value=6.8e-09 Score=87.52 Aligned_cols=62 Identities=13% Similarity=0.075 Sum_probs=53.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
|||||||++|++++++|+ ..||+|++++|++........+++ +..+|+.++..+..++.+++
T Consensus 4 lV~GatG~~G~~~~~~L~-----~~~~~v~~~~r~~~~~~~~~~~v~-~~~~d~~~~~~l~~a~~G~~ 65 (275)
T COG0702 4 LVTGATGFVGGAVVRELL-----ARGHEVRAAVRNPEAAAALAGGVE-VVLGDLRDPKSLVAGAKGVD 65 (275)
T ss_pred EEEecccchHHHHHHHHH-----hCCCEEEEEEeCHHHHHhhcCCcE-EEEeccCCHhHHHHHhcccc
Confidence 699999999999999999 789999999999764321127889 99999999999999998764
No 71
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.86 E-value=4.8e-09 Score=88.64 Aligned_cols=71 Identities=20% Similarity=0.342 Sum_probs=58.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~ 77 (239)
+||||||+||++++++|. ++|++|++++|++.... ...+++ ++.+|++|++++.++++.+. ..+|.++++
T Consensus 8 lVtGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 8 LVTGASSGIGRATAEKLA-----RAGYRVFGTSRNPARAA-PIPGVE-LLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred EEecCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhcc-ccCCCe-eEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 699999999999999999 88999999999864322 235688 99999999999988887641 127889988
Q ss_pred c
Q 048469 78 A 78 (239)
Q Consensus 78 a 78 (239)
+
T Consensus 81 a 81 (270)
T PRK06179 81 A 81 (270)
T ss_pred C
Confidence 8
No 72
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.84 E-value=8.9e-09 Score=85.27 Aligned_cols=71 Identities=11% Similarity=0.015 Sum_probs=56.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhcc----c
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLL----F 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~ 68 (239)
|||||||+||++|+++|+ ++||+|+++.|+..... ....+++ ++.+|++|++++.++++++ .
T Consensus 10 lItGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 10 LVTGAARGLGRAIALRLA-----RAGADVVVHYRSDEEAAEELVEAVEALGRRAQ-AVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCceE-EEECCcCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 89999988887653210 1134678 9999999999998887654 2
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
. ++.++|++
T Consensus 84 ~-id~vi~~a 92 (249)
T PRK12825 84 R-IDILVNNA 92 (249)
T ss_pred C-CCEEEECC
Confidence 3 78888876
No 73
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.82 E-value=1.6e-08 Score=96.49 Aligned_cols=25 Identities=4% Similarity=-0.092 Sum_probs=22.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVY 30 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~ 30 (239)
||||||||||++|+++|. ..|++|.
T Consensus 384 LVtGa~G~iG~~l~~~L~-----~~g~~v~ 408 (668)
T PLN02260 384 LIYGRTGWIGGLLGKLCE-----KQGIAYE 408 (668)
T ss_pred EEECCCchHHHHHHHHHH-----hCCCeEE
Confidence 699999999999999999 7899983
No 74
>PRK06196 oxidoreductase; Provisional
Probab=98.79 E-value=1.7e-08 Score=87.54 Aligned_cols=72 Identities=19% Similarity=0.143 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--C-CCCCceeeEeecCCCchhHHHHHhccc---CcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--F-PSSAVDHYITFDATNSGNTTEKLSLLF---NEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v 74 (239)
|||||||+||++++++|+ ..|++|++++|++.... . .-.++. ++.+|++|.+++++++..+. ..+|++
T Consensus 30 lITGasggIG~~~a~~L~-----~~G~~Vv~~~R~~~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 30 IVTGGYSGLGLETTRALA-----QAGAHVIVPARRPDVAREALAGIDGVE-VVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 699999999999999999 88999999999854211 0 112477 89999999999888776431 227888
Q ss_pred Eccc
Q 048469 75 HDPA 78 (239)
Q Consensus 75 ~~~a 78 (239)
+++|
T Consensus 104 i~nA 107 (315)
T PRK06196 104 INNA 107 (315)
T ss_pred EECC
Confidence 8877
No 75
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.79 E-value=1.3e-08 Score=85.42 Aligned_cols=72 Identities=8% Similarity=-0.043 Sum_probs=55.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----C--CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+|+||++++++|. ++|++|++++|++.... + ....+. ++.+|++|++++.++++.+. ..+
T Consensus 12 lVtGas~gIG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 12 VVTGAAQGIGRGVALRAA-----AEGARVVLVDRSELVHEVAAELRAAGGEAL-ALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCchHHHHHHHHHHhcCCeEE-EEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999 88999999999742110 0 123566 89999999988877766431 128
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
|+++|++
T Consensus 86 d~lv~nA 92 (260)
T PRK12823 86 DVLINNV 92 (260)
T ss_pred eEEEECC
Confidence 8999987
No 76
>PRK08264 short chain dehydrogenase; Validated
Probab=98.77 E-value=1.4e-08 Score=84.14 Aligned_cols=71 Identities=20% Similarity=0.173 Sum_probs=59.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
|||||||+||++++++|+ +.|+ +|++++|++........+++ ++.+|+.|++++.++++.... ++.|+|++
T Consensus 10 lItGgsg~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~vi~~a 81 (238)
T PRK08264 10 LVTGANRGIGRAFVEQLL-----ARGAAKVYAAARDPESVTDLGPRVV-PLQLDVTDPASVAAAAEAASD-VTILVNNA 81 (238)
T ss_pred EEECCCchHHHHHHHHHH-----HCCcccEEEEecChhhhhhcCCceE-EEEecCCCHHHHHHHHHhcCC-CCEEEECC
Confidence 699999999999999999 8899 89999998653221224678 999999999999998887654 78888877
No 77
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.72 E-value=2.1e-08 Score=82.92 Aligned_cols=72 Identities=10% Similarity=0.027 Sum_probs=55.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+|+||+++++.|. +.|++|++++|++.... ....+++ ++.+|++|++++.+++++.. ..+
T Consensus 9 lItGa~g~iG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 9 AIIGVSEGLGYAVAYFAL-----KEGAQVCINSRNENKLKRMKKTLSKYGNIH-YVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeE-EEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 699999999999999999 88999999999764210 0113577 89999999998888776542 125
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
+.+++++
T Consensus 83 d~ii~~a 89 (238)
T PRK05786 83 DGLVVTV 89 (238)
T ss_pred CEEEEcC
Confidence 7777665
No 78
>PRK06398 aldose dehydrogenase; Validated
Probab=98.70 E-value=3.2e-08 Score=83.30 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=57.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~ 77 (239)
|||||+|+||++++++|. +.|++|++++|+.... ..++ ++.+|++|++++.++++.+. ..+|+++++
T Consensus 10 lItGas~gIG~~ia~~l~-----~~G~~Vi~~~r~~~~~----~~~~-~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 10 IVTGGSQGIGKAVVNRLK-----EEGSNVINFDIKEPSY----NDVD-YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCeEEEEeCCcccc----CceE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 699999999999999999 8999999999975432 3577 99999999998888776542 128899998
Q ss_pred ccc
Q 048469 78 AHS 80 (239)
Q Consensus 78 a~y 80 (239)
+.+
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 743
No 79
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.70 E-value=2.2e-08 Score=83.41 Aligned_cols=73 Identities=11% Similarity=0.005 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||++++++|+ .+|++|++++|+..... + ...++. ++.+|++|++++.++++.+. .
T Consensus 10 lItGasggiG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 10 LVTGSSRGIGADTAKILA-----GAGAHVVVNYRQKAPRANKVVAEIEAAGGRAS-AVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred EEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCchHhHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHhCC
Confidence 699999999999999999 88999999999753210 0 123567 89999999999888776432 1
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.+|++++++.
T Consensus 84 ~~d~vi~~ag 93 (248)
T PRK07806 84 GLDALVLNAS 93 (248)
T ss_pred CCcEEEECCC
Confidence 2788888873
No 80
>PRK09186 flagellin modification protein A; Provisional
Probab=98.68 E-value=2.4e-08 Score=83.46 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---------WFPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||||+||+++++.|. ++|++|++++|++... ......+. ++.+|++|++++.++++.+.
T Consensus 8 lItGas~giG~~~a~~l~-----~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 8 LITGAGGLIGSALVKAIL-----EAGGIVIAADIDKEALNELLESLGKEFKSKKLS-LVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEecChHHHHHHHHHHHhhcCCCcee-EEEecCCCHHHHHHHHHHHHHHc
Confidence 699999999999999999 8999999999975421 00123456 77999999999888877542
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
..+|+++|++
T Consensus 82 ~~id~vi~~A 91 (256)
T PRK09186 82 GKIDGAVNCA 91 (256)
T ss_pred CCccEEEECC
Confidence 1278999887
No 81
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.68 E-value=2.1e-08 Score=83.40 Aligned_cols=72 Identities=18% Similarity=0.070 Sum_probs=56.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~ 77 (239)
|||||||+||++++++|+ .+|++|++++|++.... ....++. ++.+|++|.++++++++.+...++.++++
T Consensus 5 lItGas~giG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 5 LITGATSGIGKQLALDYA-----KQGWQVIACGRNQSVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred EEEcCCcHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 699999999999999999 89999999999753211 0124577 89999999999999998764335666665
Q ss_pred c
Q 048469 78 A 78 (239)
Q Consensus 78 a 78 (239)
+
T Consensus 79 a 79 (240)
T PRK06101 79 A 79 (240)
T ss_pred C
Confidence 5
No 82
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.68 E-value=1.1e-08 Score=87.11 Aligned_cols=71 Identities=11% Similarity=-0.040 Sum_probs=48.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCC-----CC----CCCCce---eeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQS-----WF----PSSAVD---HYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~-----~~----~~~~v~---~~~~~Dl~d~~~~~~~l~~~ 67 (239)
|||||+|.||+.||++|+ +.+ .+|+.++|+.... .+ ..+++. .++.+|++|.+.+..+++..
T Consensus 2 LVTGa~GSIGseL~rql~-----~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 2 LVTGAGGSIGSELVRQLL-----RYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEETTTSHHHHHHHHHHH-----CCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred EEEccccHHHHHHHHHHH-----hcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 799999999999999999 444 5799999985321 01 233454 04589999999999999876
Q ss_pred cCcceEEEccc
Q 048469 68 FNEITHVHDPA 78 (239)
Q Consensus 68 ~~~v~~v~~~a 78 (239)
. +|.|||+|
T Consensus 77 ~--pdiVfHaA 85 (293)
T PF02719_consen 77 K--PDIVFHAA 85 (293)
T ss_dssp T---SEEEE--
T ss_pred C--CCEEEECh
Confidence 5 89999988
No 83
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.67 E-value=5.1e-08 Score=82.09 Aligned_cols=75 Identities=13% Similarity=0.067 Sum_probs=58.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CC---CCCCceeeEeecCCCchhHHHHHhcccC---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WF---PSSAVDHYITFDATNSGNTTEKLSLLFN--- 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~~--- 69 (239)
||||||+.||.+++++|. ++||+|+.++|+.... .+ ..-.++ .+.+||++++++.+....+.+
T Consensus 10 lITGASsGIG~~~A~~lA-----~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~-vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 10 LITGASSGIGAELAKQLA-----RRGYNLILVARREDKLEALAKELEDKTGVEVE-VIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEE-EEECcCCChhHHHHHHHHHHhcCC
Confidence 699999999999999999 8999999999986521 01 123466 899999999887776543221
Q ss_pred cceEEEcccccc
Q 048469 70 EITHVHDPAHSA 81 (239)
Q Consensus 70 ~v~~v~~~a~yg 81 (239)
.||.++++|-||
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 389999999444
No 84
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.67 E-value=3.7e-08 Score=82.41 Aligned_cols=71 Identities=8% Similarity=0.087 Sum_probs=57.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~ 77 (239)
|||||||+||++++++|. ..|++|+.++|+..... ...+++ ++.+|++|++++.+++..+. ..+|.++|+
T Consensus 10 lItGas~gIG~~la~~l~-----~~g~~v~~~~r~~~~~~-~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 10 LVTGGTRGIGAGIARAFL-----AAGATVVVCGRRAPETV-DGRPAE-FHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCChhhhh-cCCceE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 699999999999999999 88999999999864311 234678 99999999999888876541 127899998
Q ss_pred c
Q 048469 78 A 78 (239)
Q Consensus 78 a 78 (239)
+
T Consensus 83 a 83 (252)
T PRK07856 83 A 83 (252)
T ss_pred C
Confidence 7
No 85
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.8e-08 Score=85.74 Aligned_cols=74 Identities=9% Similarity=0.225 Sum_probs=58.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhccc----CcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLF----NEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~----~~v~~v~ 75 (239)
|||||||+||++++++|. +.|++|++++|++.... +...+++ ++.+|++|.+++.++++.+. ..+|.++
T Consensus 8 lItGasggiG~~la~~l~-----~~G~~Vi~~~r~~~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 8 LITGCSSGIGAYCARALQ-----SDGWRVFATCRKEEDVAALEAEGLE-AFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHCCce-EEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 699999999999999999 88999999999864311 1124678 89999999998888877541 2388999
Q ss_pred ccccc
Q 048469 76 DPAHS 80 (239)
Q Consensus 76 ~~a~y 80 (239)
+++.+
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 98744
No 86
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.66 E-value=2.2e-08 Score=84.98 Aligned_cols=71 Identities=18% Similarity=0.047 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhcc----cCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLL----FNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~~v~ 72 (239)
|||||||+||++++++|+ ++|++|+++.|++.... ....++. ++.+|++|.+++.++++.+ .. ++
T Consensus 6 lVtGasg~IG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-id 78 (276)
T PRK06482 6 FITGASSGFGRGMTERLL-----ARGDRVAATVRRPDALDDLKARYGDRLW-VLQLDVTDSAAVRAVVDRAFAALGR-ID 78 (276)
T ss_pred EEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCceE-EEEccCCCHHHHHHHHHHHHHHcCC-CC
Confidence 699999999999999999 88999999999753210 0124678 9999999999888776542 23 78
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
+|+|++
T Consensus 79 ~vi~~a 84 (276)
T PRK06482 79 VVVSNA 84 (276)
T ss_pred EEEECC
Confidence 999887
No 87
>PRK06182 short chain dehydrogenase; Validated
Probab=98.66 E-value=1.8e-08 Score=85.46 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~ 76 (239)
+||||||+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.++++.+. ..+|.+++
T Consensus 7 lItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~l~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 7 LVTGASSGIGKATARRLA-----AQGYTVYGAARRVDKMEDLASLGVH-PLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhCCCe-EEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 699999999999999999 88999999999864211 1124578 99999999999888876441 12789998
Q ss_pred cc
Q 048469 77 PA 78 (239)
Q Consensus 77 ~a 78 (239)
++
T Consensus 81 ~a 82 (273)
T PRK06182 81 NA 82 (273)
T ss_pred CC
Confidence 87
No 88
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.65 E-value=2.3e-08 Score=82.31 Aligned_cols=73 Identities=16% Similarity=0.090 Sum_probs=59.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
|||||||+||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++++.++++.... ++++
T Consensus 1 lItGas~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFA-----AEGARVTIASRSRDRLAAAARALGGGAPVR-TAALDITDEAAVDAFFAEAGP-FDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHhcCC-CCEE
Confidence 799999999999999999 88999999999753210 0 124677 899999999999999987754 8999
Q ss_pred Eccccc
Q 048469 75 HDPAHS 80 (239)
Q Consensus 75 ~~~a~y 80 (239)
++++..
T Consensus 74 i~~ag~ 79 (230)
T PRK07041 74 VITAAD 79 (230)
T ss_pred EECCCC
Confidence 998733
No 89
>PRK06194 hypothetical protein; Provisional
Probab=98.65 E-value=2e-08 Score=85.58 Aligned_cols=73 Identities=10% Similarity=0.029 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|+ ++|++|++++|+..... . ...++. ++.+|++|.+++.++++.+. ..
T Consensus 10 lVtGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 10 VITGAASGFGLAFARIGA-----ALGMKLVLADVQQDALDRAVAELRAQGAEVL-GVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred EEeCCccHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999998753210 0 123566 89999999999888877541 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|.|+|++.
T Consensus 84 id~vi~~Ag 92 (287)
T PRK06194 84 VHLLFNNAG 92 (287)
T ss_pred CCEEEECCC
Confidence 788999883
No 90
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.65 E-value=3.2e-08 Score=83.13 Aligned_cols=74 Identities=11% Similarity=0.012 Sum_probs=58.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----CCCCCceeeEeecCCCchhHHHHHhcc----cCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----FPSSAVDHYITFDATNSGNTTEKLSLL----FNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~~v 71 (239)
|||||||+||++++++|+ +.|++|++++|++.... ....+++ ++.+|++|.+++.++++.+ ...+
T Consensus 5 lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 5 FITGAASGIGRATALLFA-----AEGWRVGAYDINEAGLAALAAELGAGNAW-TGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 699999999999999999 88999999999764311 1124678 9999999999988887654 2237
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
|.|+|++.+
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 899998843
No 91
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.64 E-value=6.3e-08 Score=81.11 Aligned_cols=72 Identities=17% Similarity=0.170 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|+ +.|++|++++|+..... . ...++. ++.+|++|.+++.++++.+. ..
T Consensus 14 lItGa~g~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 14 LVTGSSQGIGYALAEGLA-----QAGAEVILNGRDPAKLAAAAESLKGQGLSAH-ALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred EEECCcchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCceEE-EEEccCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 88999999999753210 0 123477 89999999999888877542 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.++|++
T Consensus 88 ~d~li~~a 95 (255)
T PRK07523 88 IDILVNNA 95 (255)
T ss_pred CCEEEECC
Confidence 78888887
No 92
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.64 E-value=3.1e-08 Score=81.19 Aligned_cols=71 Identities=8% Similarity=0.017 Sum_probs=57.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-C--CCCCceeeEeecCCCchhHHHHHhcccCcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-F--PSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~ 77 (239)
|||||+|+||++++++|+ ++ ++|++++|++.... . ..++++ ++.+|++|++++++++..... ++.|+|+
T Consensus 7 lVtG~~g~iG~~l~~~l~-----~~-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~vi~~ 78 (227)
T PRK08219 7 LITGASRGIGAAIARELA-----PT-HTLLLGGRPAERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLGR-LDVLVHN 78 (227)
T ss_pred EEecCCcHHHHHHHHHHH-----hh-CCEEEEeCCHHHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcCC-CCEEEEC
Confidence 699999999999999999 67 99999999854210 0 123578 999999999999999887644 8899998
Q ss_pred cc
Q 048469 78 AH 79 (239)
Q Consensus 78 a~ 79 (239)
+.
T Consensus 79 ag 80 (227)
T PRK08219 79 AG 80 (227)
T ss_pred CC
Confidence 73
No 93
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.63 E-value=3.4e-08 Score=84.02 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=56.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++++. ..++.
T Consensus 8 lVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 8 LITGVSSGFGRALAQAAL-----AAGHRVVGTVRSEAARADFEALHPDRAL-ARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred EEecCCChHHHHHHHHHH-----hCcCEEEEEeCCHHHHHHHHhhcCCCee-EEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 88999999999764210 0123577 88999999999888877542 12788
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
++|++
T Consensus 82 vv~~a 86 (277)
T PRK06180 82 LVNNA 86 (277)
T ss_pred EEECC
Confidence 88887
No 94
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.63 E-value=6.2e-08 Score=81.34 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~ 77 (239)
|||||||+||++++++|. +.|++|++++|+..... ..++. ++.+|++|++++.+.+..+. ..++.++++
T Consensus 13 lItGas~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~~--~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 84 (260)
T PRK06523 13 LVTGGTKGIGAATVARLL-----EAGARVVTTARSRPDDL--PEGVE-FVAADLTTAEGCAAVARAVLERLGGVDILVHV 84 (260)
T ss_pred EEECCCCchhHHHHHHHH-----HCCCEEEEEeCChhhhc--CCcee-EEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 699999999999999999 88999999999864321 24677 99999999998876655431 127889888
Q ss_pred cc
Q 048469 78 AH 79 (239)
Q Consensus 78 a~ 79 (239)
+.
T Consensus 85 ag 86 (260)
T PRK06523 85 LG 86 (260)
T ss_pred Cc
Confidence 73
No 95
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.63 E-value=2.4e-08 Score=84.73 Aligned_cols=72 Identities=14% Similarity=0.201 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcc----cCcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLL----FNEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~~v~~v~ 75 (239)
|||||||+||++++++|. ..|++|++++|+..... ....+++ ++.+|++|.+++.++++.+ .. +|.++
T Consensus 5 lItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~-id~vi 77 (274)
T PRK05693 5 LITGCSSGIGRALADAFK-----AAGYEVWATARKAEDVEALAAAGFT-AVQLDVNDGAALARLAEELEAEHGG-LDVLI 77 (274)
T ss_pred EEecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHCCCe-EEEeeCCCHHHHHHHHHHHHHhcCC-CCEEE
Confidence 699999999999999999 88999999999754211 1123567 8999999999888877654 23 88999
Q ss_pred cccc
Q 048469 76 DPAH 79 (239)
Q Consensus 76 ~~a~ 79 (239)
|++.
T Consensus 78 ~~ag 81 (274)
T PRK05693 78 NNAG 81 (274)
T ss_pred ECCC
Confidence 9883
No 96
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.63 E-value=5.9e-08 Score=79.88 Aligned_cols=73 Identities=18% Similarity=0.228 Sum_probs=58.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhcccC-cceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSLLFN-EITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~-~v~~v~~~ 77 (239)
+||||+|++|++++++|. +.|++|++++|++.... ....++. ++.+|++|+++++++++.+.. .++.|+|+
T Consensus 5 lItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 5 LIIGASRGLGLGLVDRLL-----ERGWQVTATVRGPQQDTALQALPGVH-IEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred EEeCCCchHHHHHHHHHH-----hCCCEEEEEeCCCcchHHHHhccccc-eEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 699999999999999999 88999999999865321 0123577 889999999988888776531 38899998
Q ss_pred cc
Q 048469 78 AH 79 (239)
Q Consensus 78 a~ 79 (239)
+.
T Consensus 79 ag 80 (225)
T PRK08177 79 AG 80 (225)
T ss_pred Cc
Confidence 73
No 97
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.63 E-value=5.5e-08 Score=81.32 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||+++++.|. +.|++|++++|+..... ....++. ++.+|++|++++.++++.+. .
T Consensus 6 lItG~sg~iG~~la~~L~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 6 LVTGGRRGIGLGIARALA-----AAGFDLAINDRPDDEELAATQQELRALGVEVI-FFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEecCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHhcC
Confidence 699999999999999999 88999999998753210 0124577 99999999998888776552 1
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.++.++|++.+
T Consensus 80 ~id~vi~~ag~ 90 (256)
T PRK12745 80 RIDCLVNNAGV 90 (256)
T ss_pred CCCEEEECCcc
Confidence 27889998743
No 98
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.63 E-value=3.5e-08 Score=82.13 Aligned_cols=74 Identities=8% Similarity=0.062 Sum_probs=57.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||+||++++++|+ +.|++|++++|++.... . ...++. ++.+|++|++++.++++.+. ..+
T Consensus 9 lItGasg~iG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 9 IVTGASSGIGEGIARRFA-----AEGARVVVTDRNEEAAERVAAEILAGGRAI-AVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 699999999999999999 88999999999864211 0 123477 89999999999988876541 127
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
++|+|++.+
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 899998843
No 99
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.62 E-value=4.2e-08 Score=81.98 Aligned_cols=72 Identities=14% Similarity=0.097 Sum_probs=57.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ .+|++|++++|++.... . ...+++ ++.+|++|++++.++++.+. ..
T Consensus 8 lItG~sg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 8 LVTGAASGIGLEIALALA-----KEGAKVVIADLNDEAAAAAAEALQKAGGKAI-GVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999999864311 0 124677 89999999999888877542 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.|+|++
T Consensus 82 ~d~vi~~a 89 (258)
T PRK12429 82 VDILVNNA 89 (258)
T ss_pred CCEEEECC
Confidence 78888877
No 100
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.60 E-value=1.9e-07 Score=95.71 Aligned_cols=68 Identities=7% Similarity=0.062 Sum_probs=48.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC----cEEEEEecCCCCCC-----------------CCCCCceeeEeecCCCc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP----WEVYGSAWCPKQSW-----------------FPSSAVDHYITFDATNS-- 57 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g----~~V~~l~R~~~~~~-----------------~~~~~v~~~~~~Dl~d~-- 57 (239)
||||||||+|++|+++|+ ..+ ++|+++.|...... ....+++ ++.+|++++
T Consensus 975 lvTGatGflG~~l~~~Ll-----~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~-~~~gDl~~~~l 1048 (1389)
T TIGR03443 975 FLTGATGFLGSFILRDLL-----TRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIE-VVLGDLSKEKF 1048 (1389)
T ss_pred EEeCCccccHHHHHHHHH-----hcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceE-EEeccCCCccC
Confidence 699999999999999999 444 89999999743210 0013688 999999764
Q ss_pred ----hhHHHHHhcccCcceEEEccc
Q 048469 58 ----GNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 58 ----~~~~~~l~~~~~~v~~v~~~a 78 (239)
+.+.++..+ +++|+|++
T Consensus 1049 gl~~~~~~~l~~~----~d~iiH~A 1069 (1389)
T TIGR03443 1049 GLSDEKWSDLTNE----VDVIIHNG 1069 (1389)
T ss_pred CcCHHHHHHHHhc----CCEEEECC
Confidence 334444332 67777766
No 101
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.60 E-value=1.1e-07 Score=80.16 Aligned_cols=72 Identities=13% Similarity=0.148 Sum_probs=58.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~ 77 (239)
|||||+|+||++++++|+ ++|++|+.++|++... ...++. ++.+|++|+++++++++.+. ..+++++|+
T Consensus 13 lItG~s~gIG~~la~~l~-----~~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 84 (266)
T PRK06171 13 IVTGGSSGIGLAIVKELL-----ANGANVVNADIHGGDG--QHENYQ-FVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN 84 (266)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCcccc--ccCceE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 699999999999999999 8999999999876543 234677 89999999999888776542 237899998
Q ss_pred ccc
Q 048469 78 AHS 80 (239)
Q Consensus 78 a~y 80 (239)
+.+
T Consensus 85 Ag~ 87 (266)
T PRK06171 85 AGI 87 (266)
T ss_pred Ccc
Confidence 843
No 102
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.60 E-value=7.1e-08 Score=79.86 Aligned_cols=73 Identities=10% Similarity=-0.023 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||+++++.|+ +.|++|+.++|++.... ....++. ++.+|++|++++.++++.+. .
T Consensus 9 lItG~sg~iG~~l~~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 9 LVTGASRGIGRAIAERLA-----AQGANVVINYASSEAGAEALVAEIGALGGKAL-AVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 78999999888764210 0134677 88999999999888776542 1
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.+++++|++.
T Consensus 83 ~id~vi~~ag 92 (248)
T PRK05557 83 GVDILVNNAG 92 (248)
T ss_pred CCCEEEECCC
Confidence 2789998873
No 103
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.60 E-value=4.1e-08 Score=81.66 Aligned_cols=72 Identities=11% Similarity=0.056 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||++|++++++|+ ++||+|++++|++.... .....+. ++.+|+.|++++.+++.++. ..
T Consensus 10 lItGasg~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 10 LVTGAARGIGRAIAVRLA-----ADGAEVIVVDICGDDAAATAELVEAAGGKAR-ARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred EEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 88999999999853210 0123477 89999999999988887542 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.|+|++
T Consensus 84 ~d~vi~~a 91 (251)
T PRK12826 84 LDILVANA 91 (251)
T ss_pred CCEEEECC
Confidence 78888887
No 104
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.59 E-value=3.2e-08 Score=82.28 Aligned_cols=72 Identities=15% Similarity=0.018 Sum_probs=57.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
+||||||+||++++++|+ +.|++|++++|++.... ....+++ ++.+|++|++++++.++.+...++
T Consensus 5 lItGas~giG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 5 LIIGATSDIARACARRYA-----AAGARLYLAARDVERLERLADDLRARGAVAVS-THELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred EEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEE-EEecCCCChHHHHHHHHHHhhcCC
Confidence 699999999999999999 88999999999864211 0124678 999999999999888876542267
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
.+++++
T Consensus 79 ~vv~~a 84 (243)
T PRK07102 79 IVLIAV 84 (243)
T ss_pred EEEECC
Confidence 788776
No 105
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.59 E-value=4.4e-08 Score=81.70 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=56.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++|+++|+ ++|++|++++|++.... ....++. ++.+|+.|++++.++++.+. ..
T Consensus 5 lItGa~g~lG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 5 LVTGAASGIGLAIALALA-----AAGANVVVNDLGEAGAEAAAKVATDAGGSVI-YLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred EEcCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 88999999999854210 0124577 89999999998877665432 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+++|+|++
T Consensus 79 ~d~vi~~a 86 (255)
T TIGR01963 79 LDILVNNA 86 (255)
T ss_pred CCEEEECC
Confidence 78888877
No 106
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.59 E-value=3.7e-08 Score=82.44 Aligned_cols=71 Identities=11% Similarity=0.019 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhcc----cC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLL----FN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~ 69 (239)
|||||||+||++++++|+ .+||+|++++|++.... . ...++. ++.+|++|++++.++++.+ ..
T Consensus 9 lItGa~~~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 9 VVSGVGPGLGRTLAVRAA-----RAGADVVLAARTAERLDEVAAEIDDLGRRAL-AVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred EEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEecCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 89999999999763210 0 124577 9999999999888777654 23
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
+|.++|++
T Consensus 83 -~d~vi~~a 90 (258)
T PRK07890 83 -VDALVNNA 90 (258)
T ss_pred -ccEEEECC
Confidence 78899887
No 107
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.6e-07 Score=85.62 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=57.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhcccCc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLFNE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~ 70 (239)
|||||+|-||+.||++++ +.+ -+++.++|+..... ....++. ++-+|++|.+.+..++++..
T Consensus 254 LVTGagGSiGsel~~qil-----~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~-~~igdVrD~~~~~~~~~~~k-- 325 (588)
T COG1086 254 LVTGGGGSIGSELCRQIL-----KFNPKEIILFSRDEYKLYLIDMELREKFPELKLR-FYIGDVRDRDRVERAMEGHK-- 325 (588)
T ss_pred EEeCCCCcHHHHHHHHHH-----hcCCCEEEEecCchHHHHHHHHHHHhhCCCcceE-EEecccccHHHHHHHHhcCC--
Confidence 699999999999999999 333 46999999854211 1135677 99999999999999999976
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
||.|||+|
T Consensus 326 vd~VfHAA 333 (588)
T COG1086 326 VDIVFHAA 333 (588)
T ss_pred CceEEEhh
Confidence 89999988
No 108
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.58 E-value=5.7e-08 Score=80.98 Aligned_cols=71 Identities=8% Similarity=-0.076 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhcc----cCc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLL----FNE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~~ 70 (239)
|||||+|+||++|+++|+ +.||+|++++|+..... ....++. ++.+|++|+++++++++.+ ..
T Consensus 9 lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~~- 81 (252)
T PRK06138 9 IVTGAGSGIGRATAKLFA-----REGARVVVADRDAEAAERVAAAIAAGGRAF-ARQGDVGSAEAVEALVDFVAARWGR- 81 (252)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCeEEEecCCHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcCC-
Confidence 699999999999999999 78999999999854210 0123567 8999999999988877654 23
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.|+|++
T Consensus 82 id~vi~~a 89 (252)
T PRK06138 82 LDVLVNNA 89 (252)
T ss_pred CCEEEECC
Confidence 88999987
No 109
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.58 E-value=6.8e-08 Score=79.62 Aligned_cols=72 Identities=10% Similarity=-0.029 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhccc---Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~ 72 (239)
|||||||+||++++++|+ ++|++|++++|++.+. .....+++ .+.+|++|.+++.++++.+. ..++
T Consensus 11 lItGatg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 11 AITGGFGGLGRATAAWLA-----ARGARVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred EEECCCCcHhHHHHHHHH-----HCCCeEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 699999999999999999 7899999999976431 11224567 88999999998888776531 1277
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
.|+|++
T Consensus 85 ~vi~~a 90 (239)
T PRK12828 85 ALVNIA 90 (239)
T ss_pred EEEECC
Confidence 888876
No 110
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.57 E-value=8e-08 Score=81.04 Aligned_cols=74 Identities=12% Similarity=0.018 Sum_probs=57.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||.++++.|+ .+|++|++++|++.... . ...++. ++.+|++|++++.++++.+. ..
T Consensus 14 lItGasggIG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 14 VVTGAGRGLGAAIALAFA-----EAGADVLIAARTESQLDEVAEQIRAAGRRAH-VVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999999753210 0 124577 89999999999887776541 12
Q ss_pred ceEEEccccc
Q 048469 71 ITHVHDPAHS 80 (239)
Q Consensus 71 v~~v~~~a~y 80 (239)
++.|+|++.+
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 8899998843
No 111
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.57 E-value=9.7e-08 Score=80.04 Aligned_cols=72 Identities=13% Similarity=0.023 Sum_probs=56.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|.+++.+++..+. ..
T Consensus 11 lItGasg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 11 VVTGAASGIGKEIALELA-----RAGAAVAIADLNQDGANAVADEINKAGGKAI-GVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCeEEEEeCChHHHHHHHHHHHhcCceEE-EEECCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 89999999999863210 0123467 89999999998888776532 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.++|++
T Consensus 85 ~d~vi~~a 92 (262)
T PRK13394 85 VDILVSNA 92 (262)
T ss_pred CCEEEECC
Confidence 78888887
No 112
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.57 E-value=1.5e-07 Score=77.74 Aligned_cols=70 Identities=11% Similarity=0.134 Sum_probs=55.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC--CcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG--PWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+||||||+||++++++|. ++ ++.|....|+.... ....++. ++++|++|.+++++..+.... +|++++++
T Consensus 4 lItGas~gIG~~ia~~l~-----~~~~~~~v~~~~~~~~~~-~~~~~~~-~~~~Dls~~~~~~~~~~~~~~-id~li~~a 75 (235)
T PRK09009 4 LIVGGSGGIGKAMVKQLL-----ERYPDATVHATYRHHKPD-FQHDNVQ-WHALDVTDEAEIKQLSEQFTQ-LDWLINCV 75 (235)
T ss_pred EEECCCChHHHHHHHHHH-----HhCCCCEEEEEccCCccc-cccCceE-EEEecCCCHHHHHHHHHhcCC-CCEEEECC
Confidence 699999999999999999 55 46677777754332 1235677 899999999988887766655 89999988
No 113
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.56 E-value=1.2e-07 Score=80.50 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=54.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhcc----
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLL---- 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~---- 67 (239)
|||||||+||+++++.|+ .+|++|++++|++.... ....+++ ++.+|++|++++.+ +..+
T Consensus 7 lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 7 IVTGASSGFGLLTTLELA-----KKGYLVIATMRNPEKQENLLSQATQLNLQQNIK-VQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred EEECCCchHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCcee-EEecCCCCHHHHHH-HHHHHHhc
Confidence 699999999999999999 88999999999754210 0124678 89999999988776 5432
Q ss_pred cCcceEEEccc
Q 048469 68 FNEITHVHDPA 78 (239)
Q Consensus 68 ~~~v~~v~~~a 78 (239)
.. +++++|++
T Consensus 80 ~~-id~vv~~a 89 (280)
T PRK06914 80 GR-IDLLVNNA 89 (280)
T ss_pred CC-eeEEEECC
Confidence 23 78898887
No 114
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.55 E-value=6.9e-08 Score=80.66 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
+||||||+||++++++|+ +.|++|++++|++.... ....+++ ++.+|++|.+++.++++.+. ..++.
T Consensus 4 lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 4 LVTGATAGFGECITRRFI-----QQGHKVIATGRRQERLQELKDELGDNLY-IAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhccceE-EEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999 88999999999864210 0123577 89999999998888776431 12788
Q ss_pred EEcccc
Q 048469 74 VHDPAH 79 (239)
Q Consensus 74 v~~~a~ 79 (239)
+++++.
T Consensus 78 vi~~ag 83 (248)
T PRK10538 78 LVNNAG 83 (248)
T ss_pred EEECCC
Confidence 988873
No 115
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.55 E-value=8.8e-08 Score=79.31 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=57.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhccc---CcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~ 75 (239)
|||||+|+||++++++|. .+|++|++++|++.... ....+++ ++.+|++|++++.+.+..+. ..+|+++
T Consensus 6 lItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 6 LITGAGQRIGLALAWHLL-----AQGQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 699999999999999999 88999999999864311 1123467 89999999998888776542 2378999
Q ss_pred cccc
Q 048469 76 DPAH 79 (239)
Q Consensus 76 ~~a~ 79 (239)
|++.
T Consensus 80 ~~ag 83 (236)
T PRK06483 80 HNAS 83 (236)
T ss_pred ECCc
Confidence 9883
No 116
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.54 E-value=1.5e-07 Score=77.88 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++|+++|. ++|++|++++|++.... ....++. ++.+|++|++++.++++++. ..
T Consensus 9 lItGasg~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 9 LVTGASRGIGRAIALRLA-----ADGAKVVIYDSNEEAAEALAAELRAAGGEAR-VLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 78999999999864310 0124577 88899999999888887642 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.++|++
T Consensus 83 id~vi~~a 90 (246)
T PRK05653 83 LDILVNNA 90 (246)
T ss_pred CCEEEECC
Confidence 68888877
No 117
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.54 E-value=9.4e-08 Score=79.94 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhcccCcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLFNEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~ 73 (239)
|||||||+||++++++|+ ..|++|++++|++.... ....++. ++.+|++|++++.+++.+ . ++.
T Consensus 6 lVtGasg~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~--~-id~ 76 (257)
T PRK09291 6 LITGAGSGFGREVALRLA-----RKGHNVIAGVQIAPQVTALRAEAARRGLALR-VEKLDLTDAIDRAQAAEW--D-VDV 76 (257)
T ss_pred EEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcce-EEEeeCCCHHHHHHHhcC--C-CCE
Confidence 699999999999999999 88999999999753210 0123578 899999999999888753 2 788
Q ss_pred EEcccc
Q 048469 74 VHDPAH 79 (239)
Q Consensus 74 v~~~a~ 79 (239)
|++++.
T Consensus 77 vi~~ag 82 (257)
T PRK09291 77 LLNNAG 82 (257)
T ss_pred EEECCC
Confidence 998873
No 118
>PRK05717 oxidoreductase; Validated
Probab=98.54 E-value=8.4e-08 Score=80.43 Aligned_cols=74 Identities=12% Similarity=0.145 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||+|+||++++++|+ +.|++|+.++|+..... ....++. ++.+|++|++++.++++.+. ..+|.
T Consensus 14 lItG~sg~IG~~~a~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 14 LVTGAARGIGLGIAAWLI-----AEGWQVVLADLDRERGSKVAKALGENAW-FIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred EEeCCcchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHcCCceE-EEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 88999999988753210 0123577 89999999998877665431 12789
Q ss_pred EEccccc
Q 048469 74 VHDPAHS 80 (239)
Q Consensus 74 v~~~a~y 80 (239)
++|++.+
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9998843
No 119
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.9e-07 Score=79.31 Aligned_cols=74 Identities=8% Similarity=-0.020 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------------CCCCCceeeEeecCCCchhHHHHHhc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------------FPSSAVDHYITFDATNSGNTTEKLSL 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------------~~~~~v~~~~~~Dl~d~~~~~~~l~~ 66 (239)
|||||||+||+++++.|. +.|++|++++|+..... ....++. ++.+|++|++++.+++..
T Consensus 10 lItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 10 FITGASRGIGLAIALRAA-----RDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL-PLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHH
Confidence 699999999999999999 88999999999754210 0123566 889999999988887765
Q ss_pred cc---CcceEEEccccc
Q 048469 67 LF---NEITHVHDPAHS 80 (239)
Q Consensus 67 ~~---~~v~~v~~~a~y 80 (239)
+. ..++.++|++.+
T Consensus 84 ~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHhCCCCEEEECCCC
Confidence 41 128999998843
No 120
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.53 E-value=9.1e-08 Score=81.23 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||||+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+. ..+++
T Consensus 7 lItGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 7 FITGASRGFGRAWTEAAL-----ERGDRVVATARDTATLADLAEKYGDRLL-PLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhccCCee-EEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999 78999999999754210 0124577 88999999998887776541 12789
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
++|++
T Consensus 81 vi~~a 85 (275)
T PRK08263 81 VVNNA 85 (275)
T ss_pred EEECC
Confidence 99987
No 121
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.1e-07 Score=79.67 Aligned_cols=72 Identities=10% Similarity=0.017 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhccc---Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~ 72 (239)
|||||||+||++++++|. +.|++|++++|++... .....+++ ++.+|+.|++++.+++..+. ..+|
T Consensus 6 lItGat~~iG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 6 LVTGAAGGIGQALARRFL-----AAGDRVLALDIDAAALAAFADALGDARFV-PVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred EEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 699999999999999999 7899999999976421 11124677 89999999999887776541 1278
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
.++|++
T Consensus 80 ~vi~~a 85 (257)
T PRK07074 80 VLVANA 85 (257)
T ss_pred EEEECC
Confidence 888887
No 122
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.53 E-value=1.1e-07 Score=82.15 Aligned_cols=73 Identities=16% Similarity=0.068 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||||+||++++++|+ ..|++|++++|+..... .....+. ++.+|++|.++++++++.+.
T Consensus 20 lItGas~gIG~~~a~~l~-----~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 20 VVTGANTGLGYETAAALA-----AKGAHVVLAVRNLDKGKAAAARITAATPGADVT-LQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred EEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEECCCCCHHHHHHHHHHHHhhC
Confidence 699999999999999999 88999999999753210 0124577 89999999999888776542
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+|+++|+|.
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 13899999883
No 123
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.52 E-value=1.2e-07 Score=79.56 Aligned_cols=72 Identities=11% Similarity=0.025 Sum_probs=55.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|+||++++++|. +.|++|+++.|+..... ....++. ++.+|++|.+++.+++..+. +
T Consensus 13 lItGas~giG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 13 LVTGAARRIGRAIALDLA-----AHGFDVAVHYNRSRDEAEALAAEIRALGRRAV-ALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 88999988877532110 0134577 89999999998888776542 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|+++|++
T Consensus 87 ~iD~vi~~a 95 (258)
T PRK09134 87 PITLLVNNA 95 (258)
T ss_pred CCCEEEECC
Confidence 378999988
No 124
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.52 E-value=2.2e-07 Score=76.60 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=55.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccC--cceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFN--EITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~--~v~~v~~~a 78 (239)
|||||||+||++++++|. ++|++|++++|++... ...+ ++.+|++|++++.+++..+.. .++.++|++
T Consensus 7 lItG~s~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 7 LVTGATKGIGLALSLRLA-----NLGHQVIGIARSAIDD----FPGE-LFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred EEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCcccc----cCce-EEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 699999999999999999 8999999999986542 1236 889999999988777664310 278888887
Q ss_pred cc
Q 048469 79 HS 80 (239)
Q Consensus 79 ~y 80 (239)
.+
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 43
No 125
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.52 E-value=5.2e-08 Score=81.86 Aligned_cols=72 Identities=11% Similarity=0.011 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCC-CCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFP-SSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~-~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||+||++++++|. +.|++|++++|++... ... ..++. ++.+|++|++++.++++.+. ..+
T Consensus 6 lItGas~gIG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 6 FITGASSGIGQALAREYA-----RQGATLGLVARRTDALQAFAARLPKAARVS-VYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred EEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhcccCCeeE-EEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 699999999999999999 7899999999975321 011 12677 99999999999888776531 227
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
|.+++++
T Consensus 80 d~lv~~a 86 (257)
T PRK07024 80 DVVIANA 86 (257)
T ss_pred CEEEECC
Confidence 8888887
No 126
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.52 E-value=1.4e-07 Score=79.06 Aligned_cols=72 Identities=11% Similarity=0.041 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.++++++. ..+
T Consensus 11 lItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 11 IVTGGASGIGAAISLRLA-----EEGAIPVIFGRSAPDDEFAEELRALQPRAE-FVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred EEeCCCChHHHHHHHHHH-----HcCCcEEEEcCChhhHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 699999999999999999 89999999999764311 0124677 99999999999888777541 127
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
+.++|++
T Consensus 85 d~vi~~a 91 (258)
T PRK08628 85 DGLVNNA 91 (258)
T ss_pred CEEEECC
Confidence 8899987
No 127
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.51 E-value=1.2e-07 Score=79.95 Aligned_cols=73 Identities=12% Similarity=0.087 Sum_probs=57.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||||.||++++++|+ +.|++|++++|+..... ....++. ++.+|++|.+++.++++.+. ..+|+
T Consensus 10 lItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 10 IVTGGATLIGAAVARALV-----AAGARVAIVDIDADNGAAVAASLGERAR-FIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeeE-EEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 89999999999864210 0124577 89999999998888776541 12789
Q ss_pred EEcccc
Q 048469 74 VHDPAH 79 (239)
Q Consensus 74 v~~~a~ 79 (239)
+++++.
T Consensus 84 lv~~ag 89 (261)
T PRK08265 84 LVNLAC 89 (261)
T ss_pred EEECCC
Confidence 999873
No 128
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.51 E-value=1.2e-07 Score=79.85 Aligned_cols=73 Identities=14% Similarity=-0.023 Sum_probs=56.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||||+||++++++|+ +.|++|++++|+..... .....+. ++.+|++|.+++.++++.+. ..+|+
T Consensus 9 lItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 9 LVTGGASGLGRAIVDRFV-----AEGARVAVLDKSAAGLQELEAAHGDAVV-GVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCceE-EEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 89999999999753210 0123577 89999999988877776531 12789
Q ss_pred EEcccc
Q 048469 74 VHDPAH 79 (239)
Q Consensus 74 v~~~a~ 79 (239)
+++++.
T Consensus 83 li~~Ag 88 (262)
T TIGR03325 83 LIPNAG 88 (262)
T ss_pred EEECCC
Confidence 999883
No 129
>PLN02253 xanthoxin dehydrogenase
Probab=98.51 E-value=1.4e-07 Score=80.13 Aligned_cols=73 Identities=11% Similarity=0.053 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WF-PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+|+||++++++|+ +.|++|++++|+.... .. ...++. ++.+|++|++++.+++..+. ..+
T Consensus 22 lItGas~gIG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 22 LVTGGATGIGESIVRLFH-----KHGAKVCIVDLQDDLGQNVCDSLGGEPNVC-FFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred EEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHhcCCCceE-EEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 699999999999999999 8899999999875311 01 124677 99999999999888776431 127
Q ss_pred eEEEcccc
Q 048469 72 THVHDPAH 79 (239)
Q Consensus 72 ~~v~~~a~ 79 (239)
|.++|++.
T Consensus 96 d~li~~Ag 103 (280)
T PLN02253 96 DIMVNNAG 103 (280)
T ss_pred CEEEECCC
Confidence 89999883
No 130
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.51 E-value=1e-07 Score=79.37 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----CCCCCceeeEeecCCCchhHHHHHhccc---Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~ 72 (239)
|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+. ..+|
T Consensus 9 lItGas~gIG~~ia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 9 LVTGANTGLGQGIAVGLA-----EAGADIVGAGRSEPSETQQQVEALGRRFL-SLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 699999999999999999 88999999999752110 0124577 89999999999887766431 2288
Q ss_pred EEEccccc
Q 048469 73 HVHDPAHS 80 (239)
Q Consensus 73 ~v~~~a~y 80 (239)
+++|++.+
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998743
No 131
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.51 E-value=1.1e-07 Score=79.74 Aligned_cols=71 Identities=14% Similarity=0.066 Sum_probs=55.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----CCCCCceeeEeecCCCchhHHHHHhcc----cCcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----FPSSAVDHYITFDATNSGNTTEKLSLL----FNEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~~v 71 (239)
|||||+|+||++++++|+ ++||+|++++|++.... ....++. ++.+|++|++++.++++.+ .. +
T Consensus 15 lItGa~g~iG~~~a~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~-~ 87 (264)
T PRK12829 15 LVTGGASGIGRAIAEAFA-----EAGARVHVCDVSEAALAATAARLPGAKVT-ATVADVADPAQVERVFDTAVERFGG-L 87 (264)
T ss_pred EEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCceE-EEEccCCCHHHHHHHHHHHHHHhCC-C
Confidence 699999999999999999 88999999999753210 0112457 8999999999988877653 23 7
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
+.|+|++
T Consensus 88 d~vi~~a 94 (264)
T PRK12829 88 DVLVNNA 94 (264)
T ss_pred CEEEECC
Confidence 8888877
No 132
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.51 E-value=2.1e-07 Score=77.60 Aligned_cols=70 Identities=11% Similarity=0.083 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~ 77 (239)
|||||+|+||++++++|+ ++|++|++++|++... ...++. ++.+|++|++++.+++.++. ..+|.++++
T Consensus 12 lItGas~~iG~~la~~l~-----~~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 83 (252)
T PRK08220 12 WVTGAAQGIGYAVALAFV-----EAGAKVIGFDQAFLTQ--EDYPFA-TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNA 83 (252)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEecchhhh--cCCceE-EEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 699999999999999999 8999999999986221 134677 89999999999888876532 127888888
Q ss_pred c
Q 048469 78 A 78 (239)
Q Consensus 78 a 78 (239)
+
T Consensus 84 a 84 (252)
T PRK08220 84 A 84 (252)
T ss_pred C
Confidence 7
No 133
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.51 E-value=2.4e-07 Score=76.98 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhc-c----c--Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSL-L----F--NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~-~----~--~~v 71 (239)
|||||||+||++++++|+ +.|++|++++|+..... ....++. ++.+|++|.+++.+++.+ + . ..+
T Consensus 5 lItGasggiG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (243)
T PRK07023 5 IVTGHSRGLGAALAEQLL-----QPGIAVLGVARSRHPSLAAAAGERLA-EVELDLSDAAAAAAWLAGDLLAAFVDGASR 78 (243)
T ss_pred EEecCCcchHHHHHHHHH-----hCCCEEEEEecCcchhhhhccCCeEE-EEEeccCCHHHHHHHHHHHHHHHhccCCCc
Confidence 699999999999999999 88999999999754211 1124577 899999999988885543 1 1 127
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
+++++++..
T Consensus 79 ~~~v~~ag~ 87 (243)
T PRK07023 79 VLLINNAGT 87 (243)
T ss_pred eEEEEcCcc
Confidence 888888743
No 134
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.51 E-value=1e-07 Score=79.88 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||||+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+. ..++.
T Consensus 10 lItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 10 LLTGAASGIGEAVAERYL-----AEGARVVIADIKPARARLAALEIGPAAI-AVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred EEeCCCchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999 88999999999764210 0123577 89999999999888777541 12788
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
++|++
T Consensus 84 li~~a 88 (257)
T PRK07067 84 LFNNA 88 (257)
T ss_pred EEECC
Confidence 88887
No 135
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.50 E-value=1.4e-07 Score=77.53 Aligned_cols=73 Identities=11% Similarity=0.148 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeecCCCchhHHHHHhccc-CcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WFPSSAVDHYITFDATNSGNTTEKLSLLF-NEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~-~~v~~v~~~a 78 (239)
+||||||+||++++++|+ ..|++|++++|++... .....+++ ++.+|++|.+++.+++..+. ..+++++|++
T Consensus 5 lvtG~sg~iG~~la~~L~-----~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 5 LIVGASRGIGREFVRQYR-----ADGWRVIATARDAAALAALQALGAE-ALALDVADPASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred EEEcCCCchhHHHHHHHH-----hCCCEEEEEECCHHHHHHHHhccce-EEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence 699999999999999999 7899999999985421 11223567 89999999998888765443 1378999987
Q ss_pred c
Q 048469 79 H 79 (239)
Q Consensus 79 ~ 79 (239)
.
T Consensus 79 g 79 (222)
T PRK06953 79 G 79 (222)
T ss_pred C
Confidence 3
No 136
>PRK08017 oxidoreductase; Provisional
Probab=98.50 E-value=1.3e-07 Score=79.10 Aligned_cols=73 Identities=16% Similarity=0.177 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeecCCCchhHHHHHhccc----CcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WFPSSAVDHYITFDATNSGNTTEKLSLLF----NEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~----~~v~~v~ 75 (239)
|||||||+||+++++.|. .+|++|++++|++... .....+++ ++.+|++|.+++.++++.+. ..++.++
T Consensus 6 lVtGasg~IG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 6 LITGCSSGIGLEAALELK-----RRGYRVLAACRKPDDVARMNSLGFT-GILLDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHhHHHHhCCCe-EEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 699999999999999999 7899999999986431 11123577 89999999988877666541 1267788
Q ss_pred cccc
Q 048469 76 DPAH 79 (239)
Q Consensus 76 ~~a~ 79 (239)
+++.
T Consensus 80 ~~ag 83 (256)
T PRK08017 80 NNAG 83 (256)
T ss_pred ECCC
Confidence 8763
No 137
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.50 E-value=1.2e-07 Score=79.35 Aligned_cols=73 Identities=10% Similarity=0.003 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||.||.+++++|. +.|++|++++|++.... . ...++. ++.+|++|++++.++++.+. ..
T Consensus 10 lItGas~giG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 10 IITGASSGIGRAAAKLFA-----REGAKVVVGARRQAELDQLVAEIRAEGGEAV-ALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 89999999999754210 0 123567 89999999998887776541 13
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|++++++.
T Consensus 84 id~li~~ag 92 (254)
T PRK07478 84 LDIAFNNAG 92 (254)
T ss_pred CCEEEECCC
Confidence 899999883
No 138
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.50 E-value=1.2e-07 Score=79.68 Aligned_cols=72 Identities=17% Similarity=0.024 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhcc----cC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLL----FN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~ 69 (239)
|||||+|+||++++++|+ +.|++|+.++|++.... ....++. ++.+|++|++++.+++..+ ..
T Consensus 16 lItGa~g~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 16 LVTGGSRGLGLQIAEALG-----EAGARVVLSARKAEELEEAAAHLEALGIDAL-WIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred EEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 88999999999753210 0123577 8999999999987766543 23
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
++.++|++.
T Consensus 90 -id~vi~~ag 98 (259)
T PRK08213 90 -VDILVNNAG 98 (259)
T ss_pred -CCEEEECCC
Confidence 789999873
No 139
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.50 E-value=8.5e-08 Score=81.28 Aligned_cols=72 Identities=18% Similarity=0.094 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C----CCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F----PSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||+++++.|+ ++||+|++++|++.... . ...++. ++.+|++|++++.+.++.+.
T Consensus 11 lItGasg~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 11 LVTGGGSGIGKGVAAGLV-----AAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVR-YEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhccCCCceE-EEEcCCCCHHHHHHHHHHHHHHc
Confidence 699999999999999999 88999999999753210 0 013567 88999999998887776541
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
..+++++|++
T Consensus 85 ~~~d~li~~a 94 (276)
T PRK05875 85 GRLHGVVHCA 94 (276)
T ss_pred CCCCEEEECC
Confidence 1278888887
No 140
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=2.2e-07 Score=76.79 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=54.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
|||||+|+||++++++|. ++|++|++++|++.... ..++. ++.+|++++ +.++++.... +|++++++
T Consensus 9 lVtGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~--~~~~~-~~~~D~~~~--~~~~~~~~~~-id~lv~~a 75 (235)
T PRK06550 9 LITGAASGIGLAQARAFL-----AQGAQVYGVDKQDKPDL--SGNFH-FLQLDLSDD--LEPLFDWVPS-VDILCNTA 75 (235)
T ss_pred EEcCCCchHHHHHHHHHH-----HCCCEEEEEeCCccccc--CCcEE-EEECChHHH--HHHHHHhhCC-CCEEEECC
Confidence 699999999999999999 88999999999864332 34677 899999987 5555555544 78899887
No 141
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.49 E-value=1.3e-07 Score=78.48 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=56.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+. ..
T Consensus 10 lItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 10 LITGASSGIGKATALAFA-----KAGWDLALVARSQDALEALAAELRSTGVKAA-AYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 89999999999764210 0124677 89999999998887776531 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|.+++++.
T Consensus 84 id~lv~~ag 92 (241)
T PRK07454 84 PDVLINNAG 92 (241)
T ss_pred CCEEEECCC
Confidence 788888873
No 142
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.49 E-value=1.1e-07 Score=79.04 Aligned_cols=72 Identities=8% Similarity=-0.060 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ +.|++|++++|+..... ....++. ++.+|++|.+++++++..+. ..
T Consensus 7 lItGas~~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 7 IVTGGGGGIGGATCRRFA-----EEGAKVAVFDLNREAAEKVAADIRAKGGNAQ-AFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999998753210 0124577 89999999998888776432 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+++++|++
T Consensus 81 ~d~vi~~a 88 (250)
T TIGR03206 81 VDVLVNNA 88 (250)
T ss_pred CCEEEECC
Confidence 78888887
No 143
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.49 E-value=1.4e-07 Score=82.06 Aligned_cols=72 Identities=17% Similarity=0.165 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----C--CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----W--FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ ..|++|++++|+.... . .....+. ++.+|++|.+++.++++.+. ..
T Consensus 10 lVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 10 IITGASSGVGLYAAKALA-----KRGWHVIMACRNLKKAEAAAQELGIPPDSYT-IIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred EEEcCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhccCCceE-EEEecCCCHHHHHHHHHHHHHhCCC
Confidence 699999999999999999 8899999999975321 0 0123577 89999999999888876531 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.++++|
T Consensus 84 iD~li~nA 91 (322)
T PRK07453 84 LDALVCNA 91 (322)
T ss_pred ccEEEECC
Confidence 78888876
No 144
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.49 E-value=1.4e-07 Score=79.36 Aligned_cols=72 Identities=8% Similarity=-0.001 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||+++++.|+ ..|++|++++|++.... ....++. ++.+|++|.+++.++++.+. ..
T Consensus 5 lVtGasg~iG~~la~~l~-----~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 5 IITGASEGIGRALAVRLA-----RAGAQLVLAARNETRLASLAQELADHGGEAL-VVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred EEecCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 78999999999853210 0124577 88999999999888877541 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.|+|++
T Consensus 79 id~vi~~a 86 (263)
T PRK06181 79 IDILVNNA 86 (263)
T ss_pred CCEEEECC
Confidence 78999987
No 145
>PRK08643 acetoin reductase; Validated
Probab=98.48 E-value=1.5e-07 Score=78.76 Aligned_cols=74 Identities=9% Similarity=0.107 Sum_probs=57.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||+++++.|+ +.|++|++++|++.... . ...++. ++.+|++|++++.+++..+. ..
T Consensus 6 lItGas~giG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 6 LVTGAGQGIGFAIAKRLV-----EDGFKVAIVDYNEETAQAAADKLSKDGGKAI-AVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999999753210 0 124567 89999999998888776542 12
Q ss_pred ceEEEccccc
Q 048469 71 ITHVHDPAHS 80 (239)
Q Consensus 71 v~~v~~~a~y 80 (239)
+++++|++.+
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8899998843
No 146
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.48 E-value=9.5e-08 Score=78.84 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+||||+|.||++++++|. ++|++|+.++|+..... ....+++ ++.+|++|++++.++++.+...+|.+++++
T Consensus 4 lItGas~giG~~ia~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 4 LVTGGDTDLGRTIAEGFR-----NDGHKVTLVGARRDDLEVAAKELDVD-AIVCDNTDPASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred EEEeCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCc-EEecCCCCHHHHHHHHHHHhhcCcEEEECC
Confidence 699999999999999999 88999999999754211 0112467 889999999999888775432278888887
No 147
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.48 E-value=1.3e-07 Score=78.16 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||+||++++++|+ ..|++|++++|++.... . ...+++ ++.+|+.|.+++.++++.+. ..+
T Consensus 10 lItGatg~iG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 10 LITGGSKGIGFAIAEALL-----AEGYKVAITARDQKELEEAAAELNNKGNVL-GLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred EEECCCCcHHHHHHHHHH-----HCCCEEEEeeCCHHHHHHHHHHHhccCcEE-EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999 78999999999764211 0 114677 89999999999888877541 127
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
+.+++++
T Consensus 84 d~vi~~a 90 (237)
T PRK07326 84 DVLIANA 90 (237)
T ss_pred CEEEECC
Confidence 8888877
No 148
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.48 E-value=1.6e-07 Score=78.19 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhcc----cC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLL----FN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~ 69 (239)
|||||||+||++++++|+ ..|++|++++|+..... . ...++. ++.+|++|.+++.++++.+ ..
T Consensus 10 lItGasg~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 10 IVTGAAGGIGQAYAEALA-----REGASVVVADINAEGAERVAKQIVADGGTAI-AVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 78999999999753210 0 123566 8899999999887776643 23
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
+|.|+|++.+
T Consensus 84 -id~vi~~ag~ 93 (250)
T PRK07774 84 -IDYLVNNAAI 93 (250)
T ss_pred -CCEEEECCCC
Confidence 7899998843
No 149
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.48 E-value=1.1e-07 Score=80.11 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhccc--Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLF--NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~--~~v~ 72 (239)
|||||||+||++++++|+ ++|++|++++|++.... . ...++. ++.+|++|++++.++++.+. ..++
T Consensus 9 lItG~s~~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 9 LLTGASGGIGQALAEALA-----AAGARLLLVGRNAEKLEALAARLPYPGRHR-WVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 699999999999999999 88999999999853210 0 124678 99999999988877665431 1278
Q ss_pred EEEccccc
Q 048469 73 HVHDPAHS 80 (239)
Q Consensus 73 ~v~~~a~y 80 (239)
.+++++.+
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 89988743
No 150
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.48 E-value=1.3e-07 Score=78.29 Aligned_cols=72 Identities=17% Similarity=0.000 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+. ..
T Consensus 11 lVtG~sg~iG~~l~~~L~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 11 LITGAGRGIGRAVAIALA-----KEGVNVGLLARTEENLKAVAEEVEAYGVKVV-IATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred EEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEE-EEECCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999999864210 0123677 89999999999888877531 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.++|++
T Consensus 85 id~vi~~a 92 (239)
T PRK07666 85 IDILINNA 92 (239)
T ss_pred ccEEEEcC
Confidence 78888877
No 151
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.48 E-value=2.1e-07 Score=80.00 Aligned_cols=73 Identities=10% Similarity=-0.026 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|. ..|++|++++|+..... . ....+. ++.+|++|++++.++++.+. ..
T Consensus 44 lItGasggIG~~la~~La-----~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 44 LLTGASSGIGEAAAEQFA-----RRGATVVAVARREDLLDAVADRITRAGGDAM-AVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 78999999999853210 0 123467 89999999998888877431 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+++++|++.
T Consensus 118 id~li~~AG 126 (293)
T PRK05866 118 VDILINNAG 126 (293)
T ss_pred CCEEEECCC
Confidence 889999883
No 152
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.47 E-value=1.6e-07 Score=78.56 Aligned_cols=73 Identities=14% Similarity=0.008 Sum_probs=54.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecCCCCC-----CC--CCCCceeeEeecCCCchhHHHHHhccc----
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWCPKQS-----WF--PSSAVDHYITFDATNSGNTTEKLSLLF---- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~-----~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---- 68 (239)
+||||||+||++++++|+ ++|++|+++ .|+.... .. ....++ ++.+|++|++++.++++.+.
T Consensus 10 lItGasg~iG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 10 LVTGASRGIGRAIAMRLA-----NDGALVAIHYGRNKQAADETIREIESNGGKAF-LIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCcCCHHHHHHHHHHHHHHhc
Confidence 699999999999999999 889998775 5654211 00 123577 89999999999888877531
Q ss_pred -----CcceEEEcccc
Q 048469 69 -----NEITHVHDPAH 79 (239)
Q Consensus 69 -----~~v~~v~~~a~ 79 (239)
..+++++|++.
T Consensus 84 ~~~~~~~id~vi~~ag 99 (254)
T PRK12746 84 IRVGTSEIDILVNNAG 99 (254)
T ss_pred cccCCCCccEEEECCC
Confidence 12789999883
No 153
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.46 E-value=2.4e-07 Score=77.12 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=57.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||||+||++++++|+ +.|++|++++|++.... ....+++ ++.+|++|++++.++++.+.
T Consensus 6 lItGas~giG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 6 LITGASSGLGAGMAREFA-----AKGRDLALCARRTDRLEELKAELLARYPGIKVA-VAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred EEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEcCCCCHHHHHHHHHHHHHHc
Confidence 699999999999999999 78999999999863210 0123577 89999999998887776542
Q ss_pred CcceEEEccccc
Q 048469 69 NEITHVHDPAHS 80 (239)
Q Consensus 69 ~~v~~v~~~a~y 80 (239)
..++++++++.+
T Consensus 80 ~~id~vi~~ag~ 91 (248)
T PRK08251 80 GGLDRVIVNAGI 91 (248)
T ss_pred CCCCEEEECCCc
Confidence 127899998844
No 154
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.46 E-value=3.4e-07 Score=76.99 Aligned_cols=72 Identities=19% Similarity=0.216 Sum_probs=53.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC-CcEEEEEecCCCCC-C-----C---CCCCceeeEeecCCCchhHHHHHhccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG-PWEVYGSAWCPKQS-W-----F---PSSAVDHYITFDATNSGNTTEKLSLLF-- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~-~-----~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~-- 68 (239)
|||||||+||++++++|+ +. |++|++++|++... . . ...+++ ++.+|++|.+++.+.++.+.
T Consensus 12 lItGas~giG~~la~~l~-----~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~-~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 12 LLLGGTSEIGLAICERYL-----KNAPARVVLAALPDDPRRDAAVAQMKAAGASSVE-VIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred EEEcCCcHHHHHHHHHHH-----hcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceE-EEEecCCChHHHHHHHHHHHhc
Confidence 699999999999999998 66 59999999986531 0 0 123678 99999999988666554321
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
..+|.+++++
T Consensus 86 g~id~li~~a 95 (253)
T PRK07904 86 GDVDVAIVAF 95 (253)
T ss_pred CCCCEEEEee
Confidence 1278888766
No 155
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.46 E-value=1.7e-07 Score=78.62 Aligned_cols=73 Identities=12% Similarity=0.027 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS--WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~ 75 (239)
|||||+|+||++++++|. +.|++|+.+.|+.... .+...++. ++.+|++|++++.++++.+. ..+|.++
T Consensus 11 lItGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 11 LITGGTRGIGRAIAEAFL-----REGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 699999999999999999 8899998887764321 11123577 89999999999888877542 1278999
Q ss_pred cccc
Q 048469 76 DPAH 79 (239)
Q Consensus 76 ~~a~ 79 (239)
|++.
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 9883
No 156
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.46 E-value=1.7e-07 Score=79.59 Aligned_cols=72 Identities=15% Similarity=0.061 Sum_probs=56.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|. .+|++|++++|+..... . ...++. ++.+|++|++++.++++.+. ..
T Consensus 14 lVtGa~g~iG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 14 LVAGASSGIGAATAIELA-----AAGFPVALGARRVEKCEELVDKIRADGGEAV-AFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 88999999998753210 0 123567 88999999999888877541 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.++|++
T Consensus 88 id~vi~~A 95 (274)
T PRK07775 88 IEVLVSGA 95 (274)
T ss_pred CCEEEECC
Confidence 78888887
No 157
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.3e-07 Score=80.16 Aligned_cols=72 Identities=15% Similarity=-0.043 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--C-CCCCceeeEeecCCCchhHHHHHhccc---CcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--F-PSSAVDHYITFDATNSGNTTEKLSLLF---NEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v 74 (239)
|||||||.||++++++|. .+|++|++++|++.... . ....++ ++.+|++|++++.++++.+. ..++.+
T Consensus 9 lVtGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 9 AITGGARGIGLATARALA-----ALGARVAIGDLDEALAKETAAELGLVV-GGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhccce-EEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 699999999999999999 88999999999754211 0 012477 89999999999887776542 127888
Q ss_pred Eccc
Q 048469 75 HDPA 78 (239)
Q Consensus 75 ~~~a 78 (239)
++++
T Consensus 83 i~~a 86 (273)
T PRK07825 83 VNNA 86 (273)
T ss_pred EECC
Confidence 8887
No 158
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.3e-07 Score=78.40 Aligned_cols=71 Identities=14% Similarity=0.049 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-C-CCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-F-PSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+||||+|+||+++++.|. ..||+|++++|++.... . ...+++ ++.+|++|.+++.++++.... ++.++|++
T Consensus 13 lItGa~g~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~-~d~vi~~a 85 (245)
T PRK07060 13 LVTGASSGIGRACAVALA-----QRGARVVAAARNAAALDRLAGETGCE-PLRLDVGDDAAIRAALAAAGA-FDGLVNCA 85 (245)
T ss_pred EEeCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHHHHHHHHHHhCC-CCEEEECC
Confidence 699999999999999999 78999999999753211 0 112467 889999999999888876544 78899887
No 159
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.45 E-value=2.1e-07 Score=77.83 Aligned_cols=74 Identities=12% Similarity=0.050 Sum_probs=57.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||+|+||++++++|. ++|++|++++|+..... .....+. ++.+|++|++++.+.+..+. ..++.
T Consensus 19 lItGas~~IG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 19 VVTGGASGIGHAIAELFA-----AKGARVALLDRSEDVAEVAAQLLGGNAK-GLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 88999999999754211 1123566 89999999998888776541 12789
Q ss_pred EEccccc
Q 048469 74 VHDPAHS 80 (239)
Q Consensus 74 v~~~a~y 80 (239)
++|++.+
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998844
No 160
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.3e-07 Score=79.23 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhccc---CcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~ 75 (239)
|||||||+||.+++++|. +.|++|++++|+..... ....... ++.+|++|++++.++++.+. ..+|+++
T Consensus 11 lItGasggIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 11 VITGGGSGIGLATARRLA-----AEGATVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred EEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 699999999999999999 88999999999754210 0111236 88999999998888877541 1278999
Q ss_pred cccc
Q 048469 76 DPAH 79 (239)
Q Consensus 76 ~~a~ 79 (239)
|++.
T Consensus 85 ~~ag 88 (255)
T PRK06057 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 9873
No 161
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.3e-07 Score=76.18 Aligned_cols=72 Identities=14% Similarity=0.080 Sum_probs=56.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|.||++++++|. ++|++|++++|++.... ....++. ++.+|++|++++.++++.+. ..
T Consensus 11 lItGa~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 11 LVTGAARGLGAAFAEALA-----EAGATVAFNDGLAAEARELAAALEAAGGRAH-AIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred EEeCCCChHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999998754210 0123577 89999999999888876542 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+++++|++
T Consensus 85 id~vi~~a 92 (250)
T PRK12939 85 LDGLVNNA 92 (250)
T ss_pred CCEEEECC
Confidence 78999887
No 162
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.45 E-value=2e-07 Score=78.22 Aligned_cols=74 Identities=12% Similarity=0.081 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----CCCCCceeeEeecCCCchhHHHHHhccc---Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~ 72 (239)
|||||||.||++++++|. +.|++|++++|+..... ....++. ++.+|++|.+++.++++.+. +.+|
T Consensus 12 lItGas~gIG~aia~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 12 IITGCNTGLGQGMAIGLA-----KAGADIVGVGVAEAPETQAQVEALGRKFH-FITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEecCchHHHHHHHHHHcCCeEE-EEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 699999999999999999 89999999988642110 0124577 89999999999888876531 2388
Q ss_pred EEEccccc
Q 048469 73 HVHDPAHS 80 (239)
Q Consensus 73 ~v~~~a~y 80 (239)
++++++.+
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99998843
No 163
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.45 E-value=2e-07 Score=78.09 Aligned_cols=73 Identities=14% Similarity=-0.028 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|.||++++++|+ +.|++|++++|+..... ....++. ++.+|++|++++.++++.+. ..
T Consensus 13 lVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 13 LITGASTGIGKRVALAYV-----EAGAQVAIAARHLDALEKLADEIGTSGGKVV-PVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 89999999999753210 0124567 88999999999888776541 23
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|+++|++.
T Consensus 87 id~lv~~ag 95 (253)
T PRK05867 87 IDIAVCNAG 95 (253)
T ss_pred CCEEEECCC
Confidence 899999883
No 164
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.9e-07 Score=76.37 Aligned_cols=74 Identities=14% Similarity=-0.005 Sum_probs=57.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-C-----C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-W-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|+||++++++|. +.|++|++++|+.... . + ...++. ++.+|++|++++.+++..+. .
T Consensus 12 lVtG~s~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 12 FVTGAGSGIGQRIAIGLA-----QAGADVALFDLRTDDGLAETAEHIEAAGRRAI-QIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 8899999999975321 0 0 123577 89999999998888776542 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|++++++.+
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 37899998843
No 165
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.45 E-value=2.4e-07 Score=76.42 Aligned_cols=72 Identities=10% Similarity=0.006 Sum_probs=55.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
||||++|+||++++++|. ++||+|++++|+..... . ...+++ ++.+|++|++++.+++.++. .
T Consensus 2 lItG~~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01830 2 LVTGASRGIGRAIALKLA-----KEGAKVIITYRSSEEGAEEVVEELKAYGVKAL-GVVCDVSDREDVKAVVEEIEEELG 75 (239)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHhC
Confidence 699999999999999999 88999999999752110 0 123467 89999999999888876541 1
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.++.|+|++
T Consensus 76 ~id~vi~~a 84 (239)
T TIGR01830 76 PIDILVNNA 84 (239)
T ss_pred CCCEEEECC
Confidence 278888877
No 166
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.44 E-value=2.9e-07 Score=79.86 Aligned_cols=73 Identities=15% Similarity=0.095 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
+||||||+||++++++|. .+|++|++++|+..... ....++. ++.+|+.|.++++++++.+.
T Consensus 18 lITGas~GIG~~~a~~La-----~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 18 VVTGASDGLGLGLARRLA-----AAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLS-LRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEEecCCCHHHHHHHHHHHHHhC
Confidence 699999999999999999 89999999999753210 0123577 99999999999887776532
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+|.++++|.
T Consensus 92 ~~iD~li~nAG 102 (313)
T PRK05854 92 RPIHLLINNAG 102 (313)
T ss_pred CCccEEEECCc
Confidence 23889999883
No 167
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.44 E-value=3.6e-07 Score=76.20 Aligned_cols=61 Identities=8% Similarity=0.064 Sum_probs=49.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
|||||||+||++++++|. ++|++|++++|++.+. .....+++ ++.+|++|++++.+.++.+
T Consensus 5 lItGasggiG~~ia~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 70 (251)
T PRK06924 5 IITGTSQGLGEAIANQLL-----EKGTHVISISRTENKELTKLAEQYNSNLT-FHSLDLQDVHELETNFNEI 70 (251)
T ss_pred EEecCCchHHHHHHHHHH-----hcCCEEEEEeCCchHHHHHHHhccCCceE-EEEecCCCHHHHHHHHHHH
Confidence 699999999999999999 7899999999986211 00124678 8999999999888877654
No 168
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.44 E-value=1.9e-07 Score=79.46 Aligned_cols=72 Identities=14% Similarity=0.018 Sum_probs=56.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|. ..|++|++++|+..... + ...++. ++.+|++|++++.++++.+. ..
T Consensus 10 lVTGas~gIG~ala~~La-----~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 10 VITGGASGIGLATGTEFA-----RRGARVVLGDVDKPGLRQAVNHLRAEGFDVH-GVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 89999999998753210 0 123467 89999999999888776541 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.++|++
T Consensus 84 id~li~nA 91 (275)
T PRK05876 84 VDVVFSNA 91 (275)
T ss_pred CCEEEECC
Confidence 78899887
No 169
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.43 E-value=3.4e-07 Score=75.99 Aligned_cols=72 Identities=13% Similarity=0.063 Sum_probs=54.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----------CCCCCceeeEeecCCCchhHHHHHhccc-
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----------FPSSAVDHYITFDATNSGNTTEKLSLLF- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~- 68 (239)
|||||||+||++++++|+ ++||+|+++.|...... .....++ ++.+|+.|++++.++++.+.
T Consensus 10 lItGasg~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 10 LITGGSGGLGRAIAVRLA-----ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL-GLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHH
Confidence 699999999999999999 88999999877532110 0123577 89999999999888776431
Q ss_pred --CcceEEEccc
Q 048469 69 --NEITHVHDPA 78 (239)
Q Consensus 69 --~~v~~v~~~a 78 (239)
..++.|+|++
T Consensus 84 ~~~~~d~vi~~a 95 (249)
T PRK12827 84 EFGRLDILVNNA 95 (249)
T ss_pred HhCCCCEEEECC
Confidence 1278888887
No 170
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.43 E-value=2.7e-07 Score=76.75 Aligned_cols=72 Identities=14% Similarity=-0.003 Sum_probs=55.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhcc----c
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLL----F 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~ 68 (239)
|||||||+||++++++|+ .+|++|+++.++..... ....++. ++.+|++|++++.++++.+ .
T Consensus 10 lItG~s~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 10 IVTGGAKGIGKAITVALA-----QEGAKVVINYNSSKEAAENLVNELGKEGHDVY-AVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred EEECCCCHHHHHHHHHHH-----HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 78999987665432110 0123577 8999999999888877764 2
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
. +++++|++.
T Consensus 84 ~-id~vi~~ag 93 (247)
T PRK12935 84 K-VDILVNNAG 93 (247)
T ss_pred C-CCEEEECCC
Confidence 3 789999883
No 171
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.43 E-value=2.2e-07 Score=78.09 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C----CCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F----PSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||++++++|+ ++|++|++++|+..... . ...++. ++.+|++|++++.++++.+.
T Consensus 11 lVtGas~gIG~~~a~~l~-----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 11 LVTGAAQGIGAAIARAFA-----REGAAVALADLDAALAERAAAAIARDVAGARVL-AVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhccCCceEE-EEEccCCCHHHHHHHHHHHHHHh
Confidence 699999999999999999 89999999999754210 0 124577 89999999998888776532
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+++++|++.
T Consensus 85 g~id~li~~ag 95 (260)
T PRK07063 85 GPLDVLVNNAG 95 (260)
T ss_pred CCCcEEEECCC
Confidence 12789999883
No 172
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.43 E-value=2e-07 Score=77.68 Aligned_cols=72 Identities=10% Similarity=0.013 Sum_probs=54.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEE-EecCCCCC-----C--CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYG-SAWCPKQS-----W--FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~-l~R~~~~~-----~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||++++++|+ +.|++|+. +.|+.... . ....++. ++.+|++|++++.++++.+. .
T Consensus 8 lItGa~g~iG~~~a~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 8 LVTGSSRGIGKAIALRLA-----EEGYDIAVNYARSRKAAEETAEEIEALGRKAL-AVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 88999876 46654321 0 0124577 89999999999988887652 1
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|.|+|++
T Consensus 82 ~id~vi~~a 90 (250)
T PRK08063 82 RLDVFVNNA 90 (250)
T ss_pred CCCEEEECC
Confidence 278888877
No 173
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.42 E-value=2.9e-07 Score=77.84 Aligned_cols=73 Identities=12% Similarity=0.021 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeecCCCchhHHHHHhccc--Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F---PSSAVDHYITFDATNSGNTTEKLSLLF--NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~--~~ 70 (239)
|||||+|.||++++++|+ +.|++|++++|+..... + ...++. ++.+|++|++++.++++.+. +.
T Consensus 12 lItGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 12 FTTASSKGIGFGVARVLA-----RAGADVILLSRNEENLKKAREKIKSESNVDVS-YIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred EEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHHHHHHHHHHhhCC
Confidence 699999999999999999 89999999999753210 0 124677 89999999998888776542 22
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|++++++.
T Consensus 86 iD~lv~nag 94 (263)
T PRK08339 86 PDIFFFSTG 94 (263)
T ss_pred CcEEEECCC
Confidence 788888873
No 174
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.42 E-value=2.3e-07 Score=78.33 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=56.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|+ ..|++|++++|++.... . ...++. ++.+|++|++++.++++++. ..
T Consensus 13 lItGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 13 VVVGGTSGINLGIAQAFA-----RAGANVAVASRSQEKVDAAVAQLQQAGPEGL-GVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999999753210 0 123566 88999999999888877642 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.+++++
T Consensus 87 iD~vi~~a 94 (264)
T PRK07576 87 IDVLVSGA 94 (264)
T ss_pred CCEEEECC
Confidence 78888877
No 175
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.42 E-value=2.5e-07 Score=77.28 Aligned_cols=74 Identities=9% Similarity=-0.005 Sum_probs=57.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|. +.|++|++++|++.... ....++. ++.+|++|.+++.++++.+. ..
T Consensus 11 lItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 11 LVTGGAAGIGRATALAFA-----REGAKVVVADRDAAGGEETVALIREAGGEAL-FVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred EEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 88999999999854210 0124577 89999999998888776541 12
Q ss_pred ceEEEccccc
Q 048469 71 ITHVHDPAHS 80 (239)
Q Consensus 71 v~~v~~~a~y 80 (239)
+++++|++.+
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 7899998843
No 176
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.42 E-value=2.2e-07 Score=78.07 Aligned_cols=74 Identities=7% Similarity=0.005 Sum_probs=57.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.+++..+. ..+
T Consensus 10 lItG~s~giG~~la~~l~-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 10 LITGALQGIGEGIARVFA-----RHGANLILLDISPEIEKLADELCGRGHRCT-AVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999 88999999999753100 0124577 89999999998888776541 127
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
|.++|++.+
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 899998843
No 177
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.42 E-value=2.4e-07 Score=78.03 Aligned_cols=74 Identities=11% Similarity=-0.041 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||||+||++++++|. +.|++|++++|++.... ....++. ++.+|++|++++.++++.+. ..+|.
T Consensus 10 lVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 10 LITGGGSGIGRALVERFL-----AEGARVAVLERSAEKLASLRQRFGDHVL-VVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcce-EEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999999 88999999999753210 0123577 89999999988887776541 23889
Q ss_pred EEccccc
Q 048469 74 VHDPAHS 80 (239)
Q Consensus 74 v~~~a~y 80 (239)
+++++.+
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9998843
No 178
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.42 E-value=2.4e-07 Score=77.84 Aligned_cols=73 Identities=11% Similarity=-0.016 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+|.||++++++|. ++|++|+.++|++.... + ...++. ++.+|++|+++++++++.+. ..+
T Consensus 4 lItGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 4 LVTASSRGIGFNVARELL-----KKGARVVISSRNEENLEKALKELKEYGEVY-AVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred EEEcCCcHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCce-EEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 699999999999999999 89999999999753210 0 123577 89999999998888776431 238
Q ss_pred eEEEcccc
Q 048469 72 THVHDPAH 79 (239)
Q Consensus 72 ~~v~~~a~ 79 (239)
|.+++++.
T Consensus 78 d~li~naG 85 (259)
T PRK08340 78 DALVWNAG 85 (259)
T ss_pred CEEEECCC
Confidence 89999883
No 179
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.41 E-value=3.3e-07 Score=77.56 Aligned_cols=72 Identities=13% Similarity=0.016 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|. ++|++|++++|+..... ....++. ++.+|++|++++.++++.+. ..
T Consensus 4 lVtGasggIG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 4 MITGAASGLGRAIALRWA-----REGWRLALADVNEEGGEETLKLLREAGGDGF-YQRCDVRDYSQLTALAQACEEKWGG 77 (270)
T ss_pred EEecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999998754210 0124577 89999999988887776432 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+++++|++
T Consensus 78 id~lI~~a 85 (270)
T PRK05650 78 IDVIVNNA 85 (270)
T ss_pred CCEEEECC
Confidence 88999987
No 180
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.41 E-value=2.8e-07 Score=76.26 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=56.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---C-----CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---W-----FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||++++++|+ ..|++|+++.|+.... . ....++. ++.+|++|++++.++++.+. .
T Consensus 4 lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 4 LVTGGMGGIGTAICQRLA-----KDGYRVAANCGPNEERAEAWLQEQGALGFDFR-VVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 8899999998842211 0 0124678 89999999998887776532 2
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.+++|+|++.
T Consensus 78 ~id~vi~~ag 87 (242)
T TIGR01829 78 PIDVLVNNAG 87 (242)
T ss_pred CCcEEEECCC
Confidence 2789999873
No 181
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.40 E-value=2.1e-07 Score=78.11 Aligned_cols=73 Identities=12% Similarity=-0.032 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C----CCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F----PSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||++++++|. +.|++|+.++|+..... . ...++. ++.+|++|.+++.+++..+.
T Consensus 6 lItG~~~~IG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 6 VVIGGGQTLGAFLCHGLA-----EEGYRVAVADINSEKAANVAQEINAEYGEGMAY-GFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeE-EEEccCCCHHHHHHHHHHHHHHc
Confidence 699999999999999999 78999999998753210 0 013577 99999999998888776542
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+|.++|++.
T Consensus 80 ~~id~vv~~ag 90 (259)
T PRK12384 80 GRVDLLVYNAG 90 (259)
T ss_pred CCCCEEEECCC
Confidence 12788898873
No 182
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.40 E-value=3.3e-07 Score=76.96 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=57.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----C--CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+|+||.+++++|+ ..|++|++++|+..... . ...++. ++.+|++|.+++.++++.+. ..+
T Consensus 19 lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 19 IVTGGNTGLGQGYAVALA-----KAGADIIITTHGTNWDETRRLIEKEGRKVT-FVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999 89999999998732111 0 124577 89999999998887776542 127
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
++++|++.+
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 899998743
No 183
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.39 E-value=5.5e-07 Score=74.67 Aligned_cols=73 Identities=11% Similarity=0.024 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------C--CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------W--FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|+||+++++.|. ++|++|+.+.|+.... . ....++. ++.+|++|++++.++++.+. .
T Consensus 9 lItG~~~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 9 IVTGASRGIGAAIARRLA-----ADGFAVAVNYAGSAAAADELVAEIEAAGGRAI-AVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 8999998887754311 0 0124577 89999999999888877542 1
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.++.++|++.
T Consensus 83 ~id~vi~~ag 92 (245)
T PRK12937 83 RIDVLVNNAG 92 (245)
T ss_pred CCCEEEECCC
Confidence 2788999873
No 184
>PRK08589 short chain dehydrogenase; Validated
Probab=98.39 E-value=2.6e-07 Score=78.37 Aligned_cols=73 Identities=11% Similarity=0.014 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----C--CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||+||++++++|+ +.|++|++++|+..... . ...++. ++.+|++|++++.++++.+. ..+
T Consensus 10 lItGas~gIG~aia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 10 VITGASTGIGQASAIALA-----QEGAYVLAVDIAEAVSETVDKIKSNGGKAK-AYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 699999999999999999 88999999999832100 0 123577 89999999998887776542 237
Q ss_pred eEEEcccc
Q 048469 72 THVHDPAH 79 (239)
Q Consensus 72 ~~v~~~a~ 79 (239)
|++++++.
T Consensus 84 d~li~~Ag 91 (272)
T PRK08589 84 DVLFNNAG 91 (272)
T ss_pred CEEEECCC
Confidence 89999883
No 185
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.39 E-value=2.6e-07 Score=77.84 Aligned_cols=74 Identities=12% Similarity=-0.012 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--C--CCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--P--SSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~--~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|.||++++++|+ +.|++|++++|++.... . . ..++. ++.+|++|.+++.+++..+.
T Consensus 12 lItGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 12 VVTGGSSGIGLATVELLL-----EAGASVAICGRDEERLASAEARLREKFPGARLL-AARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEecCCCHHHHHHHHHHHHHhc
Confidence 699999999999999999 88999999999864210 0 1 13567 88999999998887766542
Q ss_pred CcceEEEccccc
Q 048469 69 NEITHVHDPAHS 80 (239)
Q Consensus 69 ~~v~~v~~~a~y 80 (239)
..+|.+++++.+
T Consensus 86 g~id~li~~Ag~ 97 (265)
T PRK07062 86 GGVDMLVNNAGQ 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 237899998843
No 186
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.39 E-value=3.2e-07 Score=76.75 Aligned_cols=72 Identities=11% Similarity=0.054 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|.||+++++.|. ++|++|++++|+..... . ...++. ++.+|++|++++.+++..+. ..
T Consensus 5 lItG~s~giG~~ia~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 5 IITGGSSGMGKAMAKRFA-----EEGANVVITGRTKEKLEEAKLEIEQFPGQVL-TVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 88999999999754210 0 124677 89999999998887776541 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+++++|++
T Consensus 79 id~lI~~a 86 (252)
T PRK07677 79 IDALINNA 86 (252)
T ss_pred ccEEEECC
Confidence 78999887
No 187
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.39 E-value=3.8e-07 Score=76.74 Aligned_cols=72 Identities=4% Similarity=-0.077 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------CC---CCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------WF---PSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
||||||++||++++++|+ +.|++|+.+.|+.... .. ...++. ++.+|++|++++.+++..+.
T Consensus 12 lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 12 VISGGTRGIGKAIVYEFA-----QSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAK-AYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHhc
Confidence 699999999999999999 8999998887653211 00 123577 99999999999888877542
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
..+|++++++
T Consensus 86 g~id~lv~nA 95 (260)
T PRK08416 86 DRVDFFISNA 95 (260)
T ss_pred CCccEEEECc
Confidence 2388999988
No 188
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.39 E-value=6.2e-07 Score=75.22 Aligned_cols=72 Identities=7% Similarity=-0.062 Sum_probs=55.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--C---------CCCCceeeEeecCCCchhHHHHHhccc-
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--F---------PSSAVDHYITFDATNSGNTTEKLSLLF- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~---------~~~~v~~~~~~Dl~d~~~~~~~l~~~~- 68 (239)
|||||+|+||+++++.|+ ..|++|+.+.+++.... . ...+++ ++.+|++|++++.+++..+.
T Consensus 12 lItGa~~gIG~~~a~~l~-----~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 12 LIAGGAKNLGGLIARDLA-----AQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV-AFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEE-EEecCcCCHHHHHHHHHHHHH
Confidence 699999999999999999 88999888776543110 0 123577 89999999999888776542
Q ss_pred --CcceEEEccc
Q 048469 69 --NEITHVHDPA 78 (239)
Q Consensus 69 --~~v~~v~~~a 78 (239)
..+|.+++++
T Consensus 86 ~~~~id~li~~a 97 (257)
T PRK12744 86 AFGRPDIAINTV 97 (257)
T ss_pred hhCCCCEEEECC
Confidence 1278999887
No 189
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.39 E-value=3.5e-07 Score=75.79 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=55.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhcccC---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLFN--- 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~--- 69 (239)
|||||||+||+++++.|+ +.|++|+.+ +|++.... ....++. ++.+|++|++++.+++..+..
T Consensus 9 lI~Gasg~iG~~la~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 9 IVTGASGGIGRAIAELLA-----KEGAKVVIAYDINEEAAQELLEEIKEEGGDAI-AVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhC
Confidence 699999999999999999 789999998 88753210 0123577 899999999988887764411
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.++.|+|++
T Consensus 83 ~id~vi~~a 91 (247)
T PRK05565 83 KIDILVNNA 91 (247)
T ss_pred CCCEEEECC
Confidence 278888877
No 190
>PRK12743 oxidoreductase; Provisional
Probab=98.39 E-value=4.1e-07 Score=76.31 Aligned_cols=73 Identities=11% Similarity=0.026 Sum_probs=55.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||++++++|+ +.|++|+.+.|+..... ....++. ++.+|++|++++.++++.+. .
T Consensus 6 lItGas~giG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 6 IVTASDSGIGKACALLLA-----QQGFDIGITWHSDEEGAKETAEEVRSHGVRAE-IRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 89999998876543210 0123577 89999999998877776532 1
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.+|+++|++.
T Consensus 80 ~id~li~~ag 89 (256)
T PRK12743 80 RIDVLVNNAG 89 (256)
T ss_pred CCCEEEECCC
Confidence 2789998873
No 191
>PRK12742 oxidoreductase; Provisional
Probab=98.39 E-value=2.8e-07 Score=76.10 Aligned_cols=73 Identities=8% Similarity=-0.022 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--CC-CCCCceeeEeecCCCchhHHHHHhcccCcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS--WF-PSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~ 77 (239)
|||||+|.||++++++|. ++|++|+.+.|+.... .+ ...+++ ++.+|++|.+++.+.++.... +|+++++
T Consensus 10 lItGasggIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id~li~~ 82 (237)
T PRK12742 10 LVLGGSRGIGAAIVRRFV-----TDGANVRFTYAGSKDAAERLAQETGAT-AVQTDSADRDAVIDVVRKSGA-LDILVVN 82 (237)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHhCCe-EEecCCCCHHHHHHHHHHhCC-CcEEEEC
Confidence 699999999999999999 8899998877643211 00 112467 889999999988888876544 8899998
Q ss_pred ccc
Q 048469 78 AHS 80 (239)
Q Consensus 78 a~y 80 (239)
+.+
T Consensus 83 ag~ 85 (237)
T PRK12742 83 AGI 85 (237)
T ss_pred CCC
Confidence 843
No 192
>PRK07069 short chain dehydrogenase; Validated
Probab=98.38 E-value=7.6e-07 Score=74.10 Aligned_cols=73 Identities=8% Similarity=0.016 Sum_probs=54.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CC---CC-CceeeEeecCCCchhHHHHHhccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FP---SS-AVDHYITFDATNSGNTTEKLSLLF-- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~---~~-~v~~~~~~Dl~d~~~~~~~l~~~~-- 68 (239)
|||||+|+||+++++.|. ++|++|++++|++.... .. .. .+. .+.+|++|++++.+++..+.
T Consensus 3 lVtG~~~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 76 (251)
T PRK07069 3 FITGAAGGLGRAIARRMA-----EQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAF-AAVQDVTDEAQWQALLAQAADA 76 (251)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEE-EEEeecCCHHHHHHHHHHHHHH
Confidence 699999999999999999 88999999999732110 00 11 233 58899999999888776542
Q ss_pred -CcceEEEcccc
Q 048469 69 -NEITHVHDPAH 79 (239)
Q Consensus 69 -~~v~~v~~~a~ 79 (239)
..++.++|++.
T Consensus 77 ~~~id~vi~~ag 88 (251)
T PRK07069 77 MGGLSVLVNNAG 88 (251)
T ss_pred cCCccEEEECCC
Confidence 12789999873
No 193
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.38 E-value=3.8e-07 Score=75.65 Aligned_cols=72 Identities=8% Similarity=0.010 Sum_probs=54.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|+||++++++|+ +.|++|+++ .|++.... . ...++. .+.+|++|++++.++++.+. .
T Consensus 5 lItGa~g~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 5 LVTGGSRGIGRATALLLA-----QEGYTVAVNYQQNLHAAQEVVNLITQAGGKAF-VLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhCCCeEE-EEEccCCCHHHHHHHHHHHHHhCC
Confidence 699999999999999999 889998875 45432110 0 123467 89999999999988887652 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|+++|++
T Consensus 79 ~id~vi~~a 87 (247)
T PRK09730 79 PLAALVNNA 87 (247)
T ss_pred CCCEEEECC
Confidence 378898887
No 194
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.38 E-value=4.1e-07 Score=75.74 Aligned_cols=73 Identities=10% Similarity=-0.139 Sum_probs=54.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---C-----CCCCceeeEeecCCCchhHHHHHhcc----c
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---F-----PSSAVDHYITFDATNSGNTTEKLSLL----F 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~-----~~~~v~~~~~~Dl~d~~~~~~~l~~~----~ 68 (239)
|||||+|+||++++++|+ ++|++|+...|+..... . ...++. ++.+|+++++++.++++.+ .
T Consensus 10 litGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 10 VVTGSGRGIGRAIAVRLA-----KEGSLVVVNAKKRAEEMNETLKMVKENGGEGI-GVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeE-EEEeccCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 89999888776532110 0 113456 7899999999888777653 2
Q ss_pred CcceEEEccccc
Q 048469 69 NEITHVHDPAHS 80 (239)
Q Consensus 69 ~~v~~v~~~a~y 80 (239)
. +|+|+|++.+
T Consensus 84 ~-~d~vi~~ag~ 94 (252)
T PRK06077 84 V-ADILVNNAGL 94 (252)
T ss_pred C-CCEEEECCCC
Confidence 3 7899998843
No 195
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.38 E-value=5.7e-07 Score=75.98 Aligned_cols=72 Identities=14% Similarity=0.033 Sum_probs=51.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------CC---CCCCceeeEeecCCCchhHHHHHhc-----
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------WF---PSSAVDHYITFDATNSGNTTEKLSL----- 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~~Dl~d~~~~~~~l~~----- 66 (239)
+||||+|+||++++++|. ++|++|+++.|+.... .+ ...++. ++.+|++|.+++.+.+++
T Consensus 5 lITGas~gIG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 5 VVTGAAKRIGSSIAVALH-----QEGYRVVLHYHRSAAAASTLAAELNARRPNSAV-TCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred EEeCCCCcHHHHHHHHHH-----hCCCeEEEEcCCcHHHHHHHHHHHHhccCCceE-EEEccCCCchhhHHHHHHHHHHH
Confidence 699999999999999999 8999999987653211 00 123456 789999998765433222
Q ss_pred ---ccCcceEEEcccc
Q 048469 67 ---LFNEITHVHDPAH 79 (239)
Q Consensus 67 ---~~~~v~~v~~~a~ 79 (239)
.. .+|+|+|++.
T Consensus 79 ~~~~g-~iD~lv~nAG 93 (267)
T TIGR02685 79 FRAFG-RCDVLVNNAS 93 (267)
T ss_pred HHccC-CceEEEECCc
Confidence 22 3899999883
No 196
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.38 E-value=7.6e-07 Score=71.84 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=52.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEcccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPAH 79 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a~ 79 (239)
|||||+|.||++++++|. ++ ++|++++|++. .+.+|++|++++++.++.+.. ++.+++++.
T Consensus 4 lItGas~giG~~la~~l~-----~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~-id~lv~~ag 64 (199)
T PRK07578 4 LVIGASGTIGRAVVAELS-----KR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGK-VDAVVSAAG 64 (199)
T ss_pred EEEcCCcHHHHHHHHHHH-----hc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCC-CCEEEECCC
Confidence 699999999999999999 66 89999998632 467999999999999887644 899999873
No 197
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.37 E-value=6e-07 Score=74.36 Aligned_cols=74 Identities=16% Similarity=0.269 Sum_probs=57.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---C-----CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---W-----FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|+||+++++.|. +.|++|+++.|++... . ....++. ++.+|++|.+++.++++.+. .
T Consensus 6 lItG~s~~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 6 LVTGAKRGIGSAIARELL-----NDGYRVIATYFSGNDCAKDWFEEYGFTEDQVR-LKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred EEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCcHHHHHHHHHHhhccCCeEE-EEEcCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 7899999999984310 0 0123578 99999999998888776542 1
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.++++++++.+
T Consensus 80 ~id~vi~~ag~ 90 (245)
T PRK12824 80 PVDILVNNAGI 90 (245)
T ss_pred CCCEEEECCCC
Confidence 28899998743
No 198
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.37 E-value=6.3e-07 Score=76.92 Aligned_cols=74 Identities=7% Similarity=-0.065 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|+||++++++|+ +.|++|++++|+..... . ...++. ++.+|++|.+++.++++.+. .
T Consensus 50 LItGasggIG~~la~~l~-----~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 50 LITGGDSGIGRAVAVLFA-----KEGADIAIVYLDEHEDANETKQRVEKEGVKCL-LIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 88999999998753210 0 123577 89999999998887776531 1
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|.++|++.+
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 27899998843
No 199
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.37 E-value=3.6e-07 Score=80.03 Aligned_cols=72 Identities=13% Similarity=-0.006 Sum_probs=56.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||.||++++++|. ++|++|++++|+..... . ...++. ++.+|++|++++.++++.+. ..
T Consensus 11 lITGAs~GIG~aia~~la-----~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 11 VITGASSGIGQATAEAFA-----RRGARLVLAARDEEALQAVAEECRALGAEVL-VVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred EEcCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 89999999999754210 0 123566 88999999999888776431 22
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|++++++
T Consensus 85 iD~lVnnA 92 (330)
T PRK06139 85 IDVWVNNV 92 (330)
T ss_pred CCEEEECC
Confidence 89999988
No 200
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.36 E-value=3.8e-07 Score=75.81 Aligned_cols=73 Identities=15% Similarity=-0.010 Sum_probs=54.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||+|+||++++++|+ +.|++|++++|+..... ....++. ++.+|++|.+++.+.++.+. ..+++
T Consensus 10 lItGasg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 10 LITGGTSGIGLETARQFL-----AEGARVAITGRDPASLEAARAELGESAL-VIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 88999999999743210 0123567 89999999887766655331 12789
Q ss_pred EEcccc
Q 048469 74 VHDPAH 79 (239)
Q Consensus 74 v~~~a~ 79 (239)
++|++.
T Consensus 84 vi~~ag 89 (249)
T PRK06500 84 VFINAG 89 (249)
T ss_pred EEECCC
Confidence 999873
No 201
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.36 E-value=4.3e-07 Score=75.99 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|. +.|++|++++|++.... ....++. ++.+|+++++++.+.++.+. ..
T Consensus 13 lItGasg~IG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 13 LVTGASSGLGARFAQVLA-----QAGAKVVLASRRVERLKELRAEIEAEGGAAH-VVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 78999999999753210 0124577 89999999998888776531 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.+++++
T Consensus 87 ~d~li~~a 94 (258)
T PRK06949 87 IDILVNNS 94 (258)
T ss_pred CCEEEECC
Confidence 78888877
No 202
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.36 E-value=5.1e-07 Score=74.53 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhccc---Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~ 72 (239)
+|||||+.||.+++++|. ..||+|++..|+.... .+....+. .+..|++|.+++.++++.+. ..||
T Consensus 10 lITGASSGiG~A~A~~l~-----~~G~~vvl~aRR~drL~~la~~~~~~~~~-~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 10 LITGASSGIGEATARALA-----EAGAKVVLAARREERLEALADEIGAGAAL-ALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred EEecCcchHHHHHHHHHH-----HCCCeEEEEeccHHHHHHHHHhhccCceE-EEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 699999999999999999 8999999999996521 11113466 89999999999777766432 2389
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
.++++|
T Consensus 84 iLvNNA 89 (246)
T COG4221 84 ILVNNA 89 (246)
T ss_pred EEEecC
Confidence 999988
No 203
>PRK06128 oxidoreductase; Provisional
Probab=98.35 E-value=5.8e-07 Score=77.42 Aligned_cols=73 Identities=7% Similarity=-0.071 Sum_probs=55.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------F--PSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||++++++|+ +.|++|+...|+..... . ...++. ++.+|++|+++++++++.+.
T Consensus 59 lITGas~gIG~~~a~~l~-----~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 59 LITGADSGIGRATAIAFA-----REGADIALNYLPEEEQDAAEVVQLIQAEGRKAV-ALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred EEecCCCcHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEE-EEecCCCCHHHHHHHHHHHHHHh
Confidence 699999999999999999 88999988776532110 0 123566 88999999998888776531
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+|.++|++.
T Consensus 133 g~iD~lV~nAg 143 (300)
T PRK06128 133 GGLDILVNIAG 143 (300)
T ss_pred CCCCEEEECCc
Confidence 12889999883
No 204
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.35 E-value=4.1e-07 Score=75.92 Aligned_cols=72 Identities=10% Similarity=0.053 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||.+++++|+ +.|++|+++.|+..... + ...++. ++.+|++|++++.++++.+. ..
T Consensus 4 lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 4 LVTGGAQGIGKGIAERLA-----KDGFAVAVADLNEETAKETAKEINQAGGKAV-AYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999998753210 0 123577 89999999999888776541 12
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
++.++|++
T Consensus 78 id~vi~~a 85 (254)
T TIGR02415 78 FDVMVNNA 85 (254)
T ss_pred CCEEEECC
Confidence 78899987
No 205
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.35 E-value=8.1e-07 Score=74.52 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=53.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
|||||||+||++++++|+ ..|++|++++|+..... ....... ++.+|++|.+++.+.+. . +|.++++|
T Consensus 18 lITGas~gIG~ala~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~---~-iDilVnnA 87 (245)
T PRK12367 18 GITGASGALGKALTKAFR-----AKGAKVIGLTHSKINNSESNDESPNE-WIKWECGKEESLDKQLA---S-LDVLILNH 87 (245)
T ss_pred EEEcCCcHHHHHHHHHHH-----HCCCEEEEEECCchhhhhhhccCCCe-EEEeeCCCHHHHHHhcC---C-CCEEEECC
Confidence 699999999999999999 89999999999762111 0111235 78999999998877664 2 78899988
Q ss_pred cc
Q 048469 79 HS 80 (239)
Q Consensus 79 ~y 80 (239)
..
T Consensus 88 G~ 89 (245)
T PRK12367 88 GI 89 (245)
T ss_pred cc
Confidence 43
No 206
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.35 E-value=5.5e-07 Score=75.06 Aligned_cols=72 Identities=14% Similarity=0.046 Sum_probs=54.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--C---CCCCceeeEeecCCCchhHHHHHhccc---Cc-c
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--F---PSSAVDHYITFDATNSGNTTEKLSLLF---NE-I 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~-v 71 (239)
|||||+|+||+++++.|+ +.|++|+.+.|+..... . ...++. ++.+|++|++++.++++.+. .. +
T Consensus 9 lItGas~gIG~~la~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 9 LVTGGSRGLGAAIARAFA-----REGARVVVNYHQSEDAAEALADELGDRAI-ALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred EEeCCCCcHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 699999999999999999 88999988766432110 0 124677 89999999998888877542 12 7
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
+.++|++
T Consensus 83 d~li~~a 89 (253)
T PRK08642 83 TTVVNNA 89 (253)
T ss_pred eEEEECC
Confidence 8888887
No 207
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.35 E-value=4.7e-07 Score=75.63 Aligned_cols=73 Identities=8% Similarity=0.005 Sum_probs=55.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||++++++|. +.|++|++++|+..... . ....+. ++.+|+.|.+++.++++.+. ..
T Consensus 12 lItGas~gIG~~l~~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 12 LVTGASRGIGEAIAKLLA-----QQGAHVIVSSRKLDGCQAVADAIVAAGGKAE-ALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 78999999999753210 0 123467 89999999998877766531 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+++++|++.
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 788888874
No 208
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.35 E-value=1.2e-06 Score=73.82 Aligned_cols=66 Identities=11% Similarity=0.034 Sum_probs=52.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--C----CCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--F----PSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
|+|||||+|+.+|.+|. +.|-+|+.--|..+... + .-.++- +...|++|+++++++++..+. |.++
T Consensus 66 VFGAtGFlGryvvnkla-----k~GSQviiPyR~d~~~~r~lkvmGdLGQvl-~~~fd~~DedSIr~vvk~sNV-VINL 137 (391)
T KOG2865|consen 66 VFGATGFLGRYVVNKLA-----KMGSQVIIPYRGDEYDPRHLKVMGDLGQVL-FMKFDLRDEDSIRAVVKHSNV-VINL 137 (391)
T ss_pred EecccccccHHHHHHHh-----hcCCeEEEeccCCccchhheeeccccccee-eeccCCCCHHHHHHHHHhCcE-EEEe
Confidence 79999999999999999 88999999999764321 1 124566 999999999999999987642 4444
No 209
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.35 E-value=4e-07 Score=79.83 Aligned_cols=72 Identities=10% Similarity=-0.063 Sum_probs=56.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
+||||||+||++++++|. ++|++|++++|+..... ....++. ++.+|++|+++++++++.+. ..
T Consensus 12 lITGas~gIG~~la~~la-----~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~-~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 12 VITGASAGVGRATARAFA-----RRGAKVVLLARGEEGLEALAAEIRAAGGEAL-AVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred EEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHHHHHHCCC
Confidence 699999999999999999 89999999999753210 0123567 89999999999888876532 23
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|++++++
T Consensus 86 iD~lInnA 93 (334)
T PRK07109 86 IDTWVNNA 93 (334)
T ss_pred CCEEEECC
Confidence 78898887
No 210
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.34 E-value=5.3e-07 Score=74.69 Aligned_cols=74 Identities=8% Similarity=-0.113 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||||+||++++++|+ ++|+.|+...|++.... ....+++ ++.+|++|.+++.+++..+. ..+|.
T Consensus 10 lItGa~g~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 10 LVTGASGGIGEEIARLLH-----AQGAIVGLHGTRVEKLEALAAELGERVK-IFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999 88999988888753210 0123577 88999999998887765431 22789
Q ss_pred EEccccc
Q 048469 74 VHDPAHS 80 (239)
Q Consensus 74 v~~~a~y 80 (239)
++|++..
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9998843
No 211
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.34 E-value=5.3e-07 Score=75.47 Aligned_cols=73 Identities=10% Similarity=0.075 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|+ +.|++|+.++|++.... . ...++. ++.+|++|++++.+.+..+. ..
T Consensus 13 lItGas~giG~~ia~~L~-----~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 13 LITGSAQGIGFLLATGLA-----EYGAEIIINDITAERAELAVAKLRQEGIKAH-AAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred EEECCCChHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEecCCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 88999999999753210 0 123566 88999999998887776532 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|.++|++.
T Consensus 87 id~vi~~ag 95 (254)
T PRK08085 87 IDVLINNAG 95 (254)
T ss_pred CCEEEECCC
Confidence 788888873
No 212
>PRK09242 tropinone reductase; Provisional
Probab=98.33 E-value=7.1e-07 Score=74.81 Aligned_cols=74 Identities=15% Similarity=0.148 Sum_probs=57.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|.||+++++.|. +.|++|++++|+..... ....++. ++.+|++|++++.++++.+.
T Consensus 13 lItGa~~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 13 LITGASKGIGLAIAREFL-----GLGADVLIVARDADALAQARDELAEEFPEREVH-GLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred EEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEE-EEECCCCCHHHHHHHHHHHHHHc
Confidence 699999999999999999 88999999999753210 0123567 89999999998887776542
Q ss_pred CcceEEEccccc
Q 048469 69 NEITHVHDPAHS 80 (239)
Q Consensus 69 ~~v~~v~~~a~y 80 (239)
..+|++++++.+
T Consensus 87 g~id~li~~ag~ 98 (257)
T PRK09242 87 DGLHILVNNAGG 98 (257)
T ss_pred CCCCEEEECCCC
Confidence 237899998844
No 213
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.33 E-value=5.5e-07 Score=76.43 Aligned_cols=73 Identities=7% Similarity=-0.021 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
+||||+|+||++++++|. +.|++|++++|+..... . ...++. ++.+|++|++++.++++.+. ..
T Consensus 14 lVtGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 14 VITGGGGVLGGAMAKELA-----RAGAKVAILDRNQEKAEAVVAEIKAAGGEAL-AVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 89999999999753210 0 123567 89999999988887766431 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
++.++|++.
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 889999884
No 214
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.32 E-value=6.4e-07 Score=74.50 Aligned_cols=73 Identities=8% Similarity=-0.001 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|+||+++++.|. +.|++|++++|+..... ....++. ++.+|++|++++.++++.+. ..
T Consensus 9 lItG~~g~iG~~~a~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 9 VITGGAQGLGRAMAEYLA-----QKGAKLALIDLNQEKLEEAVAECGALGTEVR-GYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 78999999999753210 0124567 89999999988887776542 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
++.++|++.
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 789999873
No 215
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.32 E-value=5.4e-07 Score=74.99 Aligned_cols=74 Identities=8% Similarity=0.014 Sum_probs=54.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-C-----C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-W-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||+++++.|+ +.|++|+.+.++.... . . ...++. ++.+|++|++++.++++.+. .
T Consensus 6 lItGas~giG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 6 LITGASRGIGRATAVLAA-----ARGWSVGINYARDAAAAEETADAVRAAGGRAC-VVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred EEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEeccCCHHHHHHHHHHHHHhcC
Confidence 699999999999999999 8899987765443211 0 0 123577 99999999998887776432 1
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+++++|++..
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06947 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCcc
Confidence 28899998843
No 216
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.32 E-value=6.2e-07 Score=75.05 Aligned_cols=73 Identities=12% Similarity=0.132 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
+||||+|+||++++++|. +.|++|++++|++.... ....++. ++.+|++|++++.++++++. ..
T Consensus 15 lItGas~~IG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 15 LVTGSARGLGFEIARALA-----GAGAHVLVNGRNAATLEAAVAALRAAGGAAE-ALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred EEECCCchHHHHHHHHHH-----HcCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 88999999999853210 0123577 99999999998888777542 12
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
++.+++++.
T Consensus 89 id~vi~~ag 97 (256)
T PRK06124 89 LDILVNNVG 97 (256)
T ss_pred CCEEEECCC
Confidence 678888873
No 217
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.31 E-value=6.4e-07 Score=75.22 Aligned_cols=71 Identities=11% Similarity=0.004 Sum_probs=58.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeecCCCchhHHHHHhcccCcce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F---PSSAVDHYITFDATNSGNTTEKLSLLFNEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~ 72 (239)
|||||+|.||+++++.|. ..|++|++++|++.... . ...++. ++.+|++|++++.++++.... ++
T Consensus 11 lItG~~~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~g~-id 83 (259)
T PRK06125 11 LITGASKGIGAAAAEAFA-----AEGCHLHLVARDADALEALAADLRAAHGVDVA-VHALDLSSPEAREQLAAEAGD-ID 83 (259)
T ss_pred EEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHHHHHHHHhCC-CC
Confidence 699999999999999999 78999999999754210 0 123577 899999999999988876644 89
Q ss_pred EEEccc
Q 048469 73 HVHDPA 78 (239)
Q Consensus 73 ~v~~~a 78 (239)
.+++++
T Consensus 84 ~lv~~a 89 (259)
T PRK06125 84 ILVNNA 89 (259)
T ss_pred EEEECC
Confidence 999987
No 218
>PRK07985 oxidoreductase; Provisional
Probab=98.31 E-value=1.1e-06 Score=75.61 Aligned_cols=73 Identities=11% Similarity=-0.147 Sum_probs=54.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||++++++|+ +.|++|+++.|+..... ....++. ++.+|++|.+++.++++.+.
T Consensus 53 lITGas~gIG~aia~~L~-----~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 53 LVTGGDSGIGRAAAIAYA-----REGADVAISYLPVEEEDAQDVKKIIEECGRKAV-LLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred EEECCCCcHHHHHHHHHH-----HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHHHHHHHh
Confidence 699999999999999999 88999998876532110 0123566 89999999998887766432
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+|++++++.
T Consensus 127 g~id~lv~~Ag 137 (294)
T PRK07985 127 GGLDIMALVAG 137 (294)
T ss_pred CCCCEEEECCC
Confidence 12788888873
No 219
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.31 E-value=9.1e-07 Score=73.23 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=54.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||.+++++|. ++|++|++++|+..... . ...++. ++.+|++|++++.++++.+. .
T Consensus 2 lItGas~giG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01831 2 LVTGASRGIGRAIANRLA-----ADGFEICVHYHSGRSDAESVVSAIQAQGGNAR-LLQFDVADRVACRTLLEADIAEHG 75 (239)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 88999999987642110 0 124577 99999999998887766421 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.++.+++++
T Consensus 76 ~i~~li~~a 84 (239)
T TIGR01831 76 AYYGVVLNA 84 (239)
T ss_pred CCCEEEECC
Confidence 267788876
No 220
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.31 E-value=6e-07 Score=75.25 Aligned_cols=73 Identities=7% Similarity=0.012 Sum_probs=56.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
+||||+|+||++++++|. ..|++ |++++|++.... ....++. ++.+|++|++++.++++.+. .
T Consensus 10 lItGa~g~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 10 LVTGGTQGLGAAIARAFA-----ERGAAGLVICGRNAEKGEAQAAELEALGAKAV-FVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHHHHhC
Confidence 699999999999999999 88998 999999753210 0123566 88999999998888876541 1
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.++.++|++.
T Consensus 84 ~id~li~~ag 93 (260)
T PRK06198 84 RLDALVNAAG 93 (260)
T ss_pred CCCEEEECCC
Confidence 2788888873
No 221
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.30 E-value=7.9e-07 Score=74.54 Aligned_cols=74 Identities=12% Similarity=0.023 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---C--CCCCceeeEeecCCCchhHHHHHhccc---Ccce
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---F--PSSAVDHYITFDATNSGNTTEKLSLLF---NEIT 72 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~ 72 (239)
|||||+|.||++++++|. +.|++|++++|+..... . ...++. ++.+|++|.+++.++++.+. ..+|
T Consensus 14 lItG~~~gIG~a~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 14 VVTGCDTGLGQGMALGLA-----EAGCDIVGINIVEPTETIEQVTALGRRFL-SLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEecCcchHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 699999999999999999 88999998877543110 0 123567 89999999998888776531 1388
Q ss_pred EEEccccc
Q 048469 73 HVHDPAHS 80 (239)
Q Consensus 73 ~v~~~a~y 80 (239)
.++|++.+
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998844
No 222
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.30 E-value=6.8e-07 Score=74.88 Aligned_cols=73 Identities=8% Similarity=-0.049 Sum_probs=56.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhcc----cC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLL----FN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~ 69 (239)
|||||+|+||++++++|. .+|++|+.++|+..... . ...++. ++.+|++|.+++.++++.+ ..
T Consensus 15 lVtG~s~gIG~~la~~l~-----~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 15 IITGAGAGIGKEIAITFA-----TAGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 88999999998753210 0 123567 8899999999888776653 23
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
++++++++.+
T Consensus 89 -~d~li~~ag~ 98 (255)
T PRK06113 89 -VDILVNNAGG 98 (255)
T ss_pred -CCEEEECCCC
Confidence 7899998843
No 223
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.29 E-value=9.9e-07 Score=75.88 Aligned_cols=72 Identities=13% Similarity=-0.011 Sum_probs=55.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CC-CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WF-PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||||.||++++++|. +.|++|++++|+.... .+ ....+. .+.+|++|.+++.++++.+. ..+
T Consensus 13 lItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 13 VVTGAARGIGAELARRLH-----ARGAKLALVDLEEAELAALAAELGGDDRVL-TVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCCcEE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999 8999999999975421 01 123455 66799999998888776541 228
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
|.+++++
T Consensus 87 d~vI~nA 93 (296)
T PRK05872 87 DVVVANA 93 (296)
T ss_pred CEEEECC
Confidence 8999988
No 224
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.27 E-value=8.8e-07 Score=74.69 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||+|.||++++++|+ ..|++|+.+.|++.... . ...++. ++.+|++|.+++.+++..+. ..
T Consensus 14 lItGa~~~iG~~ia~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 14 LITGASYGIGFAIAKAYA-----KAGATIVFNDINQELVDKGLAAYRELGIEAH-GYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 699999999999999999 88999999988753210 0 123577 89999999998888776532 12
Q ss_pred ceEEEccccc
Q 048469 71 ITHVHDPAHS 80 (239)
Q Consensus 71 v~~v~~~a~y 80 (239)
+|+++|++.+
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 7899998843
No 225
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.27 E-value=8.8e-07 Score=73.65 Aligned_cols=72 Identities=6% Similarity=0.013 Sum_probs=53.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------CC--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------WF--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||++++++|+ +.|++|+.+.|+.... .+ ...++. ++.+|++|.+++.+++..+. .
T Consensus 6 lVtG~~~~iG~~~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 6 IITGASRGIGAATALLAA-----ERGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL-AVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCeEEEecCCCHHHHHHHHHHHHhCCCcEE-EEEeccCCHHHHHHHHHHHHHHhC
Confidence 699999999999999999 8899987776543210 00 123567 89999999998888776542 1
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.++.++|++
T Consensus 80 ~id~li~~a 88 (248)
T PRK06123 80 RLDALVNNA 88 (248)
T ss_pred CCCEEEECC
Confidence 278888887
No 226
>PRK05855 short chain dehydrogenase; Validated
Probab=98.27 E-value=7.7e-07 Score=82.86 Aligned_cols=73 Identities=14% Similarity=-0.037 Sum_probs=57.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|. .+|++|++++|+..... ....++. ++.+|++|++++.+++..+. ..
T Consensus 319 lv~G~s~giG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 319 VVTGAGSGIGRETALAFA-----REGAEVVASDIDEAAAERTAELIRAAGAVAH-AYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred EEECCcCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 89999999999753210 0123567 89999999999888876542 23
Q ss_pred ceEEEcccc
Q 048469 71 ITHVHDPAH 79 (239)
Q Consensus 71 v~~v~~~a~ 79 (239)
+|.++++|.
T Consensus 393 id~lv~~Ag 401 (582)
T PRK05855 393 PDIVVNNAG 401 (582)
T ss_pred CcEEEECCc
Confidence 899999883
No 227
>PLN00015 protochlorophyllide reductase
Probab=98.27 E-value=1.1e-06 Score=76.00 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=56.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
||||||+.||.+++++|. .+| ++|++.+|+..... . ...++. ++.+|++|.++++++++.+. .
T Consensus 1 lITGas~GIG~aia~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~~ 74 (308)
T PLN00015 1 IITGASSGLGLATAKALA-----ETGKWHVVMACRDFLKAERAAKSAGMPKDSYT-VMHLDLASLDSVRQFVDNFRRSGR 74 (308)
T ss_pred CEeCCCChHHHHHHHHHH-----HCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEecCCCHHHHHHHHHHHHhcCC
Confidence 799999999999999999 889 99999999753210 0 123567 88999999999887776542 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|+++++|
T Consensus 75 ~iD~lInnA 83 (308)
T PLN00015 75 PLDVLVCNA 83 (308)
T ss_pred CCCEEEECC
Confidence 388999988
No 228
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.25 E-value=1.3e-06 Score=72.60 Aligned_cols=73 Identities=14% Similarity=0.074 Sum_probs=53.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---CC-----CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---WF-----PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~-----~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||||+||++++++|. +.|++|+++.++.... .. ...++. .+.+|++|.+++.+++.++. .
T Consensus 7 lVtG~s~giG~~~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 7 YVTGGMGGIGTSICQRLH-----KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFI-ASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred EEECCCChHHHHHHHHHH-----HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHhC
Confidence 699999999999999999 8899988865432211 00 123466 77899999998887776431 1
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.++.++|++.
T Consensus 81 ~id~li~~ag 90 (246)
T PRK12938 81 EIDVLVNNAG 90 (246)
T ss_pred CCCEEEECCC
Confidence 2789999883
No 229
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.24 E-value=1.2e-06 Score=73.47 Aligned_cols=74 Identities=9% Similarity=0.071 Sum_probs=56.6
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC----CCCCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQS----WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+ +.||++++++|+ +.|++|+..+|+.... ......+. ++.+|++|+++++++++.+. ..+
T Consensus 11 lItGas~~~gIG~a~a~~la-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 11 VVMGVANKRSIAWGCAQAIK-----DQGATVIYTYQNDRMKKSLQKLVDEEDL-LVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred EEeCCCCCCchHHHHHHHHH-----HCCCEEEEecCchHHHHHHHhhccCcee-EEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 699999 799999999999 8999999998873210 11124567 89999999998887766542 238
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
|.+++++.+
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 899998844
No 230
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.23 E-value=1.5e-06 Score=75.40 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=56.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCC-----CC--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQS-----WF--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~-----~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
||||||+.||.+++++|+ .+| ++|++++|+.... .+ ....+. ++.+|++|.+++++++..+. .
T Consensus 7 lITGas~GIG~aia~~L~-----~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 7 IITGASSGLGLYAAKALA-----ATGEWHVIMACRDFLKAEQAAKSLGMPKDSYT-IMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred EEECCCChHHHHHHHHHH-----HcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEcCCCCHHHHHHHHHHHHHhCC
Confidence 699999999999999999 889 9999999975321 00 123567 88999999998887776542 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|+++++|
T Consensus 81 ~iD~lI~nA 89 (314)
T TIGR01289 81 PLDALVCNA 89 (314)
T ss_pred CCCEEEECC
Confidence 388999988
No 231
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.23 E-value=1.4e-06 Score=78.17 Aligned_cols=68 Identities=10% Similarity=-0.003 Sum_probs=54.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~ 76 (239)
+||||||+||++++++|. ++|++|++++|++.... ....++. .+.+|++|++++.+.+.+ +|.+++
T Consensus 182 LITGASgGIG~aLA~~La-----~~G~~Vi~l~r~~~~l~~~~~~~~~~v~-~v~~Dvsd~~~v~~~l~~----IDiLIn 251 (406)
T PRK07424 182 AVTGASGTLGQALLKELH-----QQGAKVVALTSNSDKITLEINGEDLPVK-TLHWQVGQEAALAELLEK----VDILII 251 (406)
T ss_pred EEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCCeE-EEEeeCCCHHHHHHHhCC----CCEEEE
Confidence 699999999999999999 88999999999754210 0112466 789999999998887753 678888
Q ss_pred cc
Q 048469 77 PA 78 (239)
Q Consensus 77 ~a 78 (239)
++
T Consensus 252 nA 253 (406)
T PRK07424 252 NH 253 (406)
T ss_pred CC
Confidence 77
No 232
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.23 E-value=1.6e-06 Score=73.37 Aligned_cols=72 Identities=11% Similarity=0.024 Sum_probs=53.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
+||||||+||++++++|. +.|++|++++|++.... .....+. ++.+|++|++++.+.+..+. .
T Consensus 4 lItGas~giG~~la~~la-----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 4 FVTGAASGIGRATALRLA-----AQGAELFLTDRDADGLAQTVADARALGGTVPE-HRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred EEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCcce-EEEeeCCCHHHHHHHHHHHHHhcC
Confidence 699999999999999999 88999999998753210 0011234 67899999988877665431 1
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|++++++
T Consensus 78 ~id~lv~~a 86 (272)
T PRK07832 78 SMDVVMNIA 86 (272)
T ss_pred CCCEEEECC
Confidence 278999887
No 233
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.23 E-value=2.5e-06 Score=71.49 Aligned_cols=74 Identities=9% Similarity=0.108 Sum_probs=56.2
Q ss_pred CeecccC--hhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--------C----------CCCCCceeeEeecCCCchhH
Q 048469 1 MVIGIVS--MADLSFTEALKSPIALGGPWEVYGSAWCPKQS--------W----------FPSSAVDHYITFDATNSGNT 60 (239)
Q Consensus 1 LVtGatG--~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~----------~~~~~v~~~~~~Dl~d~~~~ 60 (239)
||||||| .||.+++++|. ..|++|++++|++.+. . ....+++ ++.+|++|.+++
T Consensus 9 lItGas~~~giG~~la~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~ 82 (256)
T PRK12748 9 LVTGASRLNGIGAAVCRRLA-----AKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCE-HMEIDLSQPYAP 82 (256)
T ss_pred EEeCCCCCCCHHHHHHHHHH-----HcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEE-EEECCCCCHHHH
Confidence 6999996 69999999999 8899999999973211 0 0123577 999999999988
Q ss_pred HHHHhccc---CcceEEEccccc
Q 048469 61 TEKLSLLF---NEITHVHDPAHS 80 (239)
Q Consensus 61 ~~~l~~~~---~~v~~v~~~a~y 80 (239)
.++++.+. ..+++|+|++.+
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~ 105 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAY 105 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCc
Confidence 87776542 238899998844
No 234
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.22 E-value=1.3e-06 Score=68.18 Aligned_cols=72 Identities=13% Similarity=0.185 Sum_probs=56.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC-CcEEEEEecC--CCC-C-C-----CCCCCceeeEeecCCCchhHHHHHhccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG-PWEVYGSAWC--PKQ-S-W-----FPSSAVDHYITFDATNSGNTTEKLSLLF-- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~-g~~V~~l~R~--~~~-~-~-----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~-- 68 (239)
|||||+|.||++++++|+ ++ ++.|+.++|+ ... . . ....++. ++.+|+++++++++.++.+.
T Consensus 4 lItGa~~giG~~~a~~l~-----~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 4 LITGASSGIGRALARALA-----RRGARVVILTSRSEDSEGAQELIQELKAPGAKIT-FIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp EEETTTSHHHHHHHHHHH-----HTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEE-EEESETTSHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHH-----hcCceEEEEeeecccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 699999999999999999 55 5679999998 111 0 0 0235678 99999999999988887664
Q ss_pred -CcceEEEccc
Q 048469 69 -NEITHVHDPA 78 (239)
Q Consensus 69 -~~v~~v~~~a 78 (239)
..++++++++
T Consensus 78 ~~~ld~li~~a 88 (167)
T PF00106_consen 78 FGPLDILINNA 88 (167)
T ss_dssp HSSESEEEEEC
T ss_pred ccccccccccc
Confidence 2388999887
No 235
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.21 E-value=2.1e-06 Score=66.85 Aligned_cols=74 Identities=11% Similarity=0.029 Sum_probs=54.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCCCCCCC----------CCCCceeeEeecCCCchhHHHHHhccc-
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCPKQSWF----------PSSAVDHYITFDATNSGNTTEKLSLLF- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~----------~~~~v~~~~~~Dl~d~~~~~~~l~~~~- 68 (239)
+||||+|+||.+++++|. .+|+ .|+.++|+...... ...++. ++.+|+++++++.+.+..+.
T Consensus 4 li~Ga~~~iG~~~~~~l~-----~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 77 (180)
T smart00822 4 LITGGLGGLGLELARWLA-----ERGARHLVLLSRSGPDAPGAAELLAELEALGAEVT-VVACDVADRAALAAALAAIPA 77 (180)
T ss_pred EEEcCCChHHHHHHHHHH-----HhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHH
Confidence 699999999999999999 6775 68888887543210 123566 88999999988877766541
Q ss_pred --CcceEEEccccc
Q 048469 69 --NEITHVHDPAHS 80 (239)
Q Consensus 69 --~~v~~v~~~a~y 80 (239)
..++.+++++.+
T Consensus 78 ~~~~id~li~~ag~ 91 (180)
T smart00822 78 RLGPLRGVIHAAGV 91 (180)
T ss_pred HcCCeeEEEEcccc
Confidence 226888888743
No 236
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.21 E-value=1.8e-06 Score=72.62 Aligned_cols=72 Identities=7% Similarity=-0.015 Sum_probs=54.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+|.||+++++.|. +.|++|+.+.|+..... . ...++. ++.+|++|.+++.+.++.+. .
T Consensus 11 lItGa~~gIG~~ia~~l~-----~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 11 VITGGSTGLGRAMAVRFG-----KEKAKVVINYRSDEEEANDVAEEIKKAGGEAI-AVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999 88999988888542110 0 123566 88999999998887766431 1
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+++++|++
T Consensus 85 ~id~lv~~a 93 (261)
T PRK08936 85 TLDVMINNA 93 (261)
T ss_pred CCCEEEECC
Confidence 278898887
No 237
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.21 E-value=2.2e-06 Score=72.91 Aligned_cols=75 Identities=9% Similarity=0.032 Sum_probs=57.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---------WFPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
+|||||..||.+++.+|. ..|..++.+.|+.... .....++. .+++|++|.++++++++.+.
T Consensus 16 vITGASsGIG~~lA~~la-----~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~-~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 16 LITGASSGIGEALAYELA-----KRGAKLVLVARRARRLERVAEELRKLGSLEKVL-VLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred EEeCCCcHHHHHHHHHHH-----hCCCceEEeehhhhhHHHHHHHHHHhCCcCccE-EEeCccCCHHHHHHHHHHHHHhc
Confidence 699999999999999999 8999877777764321 01112588 99999999999888864321
Q ss_pred CcceEEEcccccc
Q 048469 69 NEITHVHDPAHSA 81 (239)
Q Consensus 69 ~~v~~v~~~a~yg 81 (239)
..+||++++|-++
T Consensus 90 g~vDvLVNNAG~~ 102 (282)
T KOG1205|consen 90 GRVDVLVNNAGIS 102 (282)
T ss_pred CCCCEEEecCccc
Confidence 2399999999554
No 238
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.20 E-value=9.7e-06 Score=73.23 Aligned_cols=71 Identities=15% Similarity=0.053 Sum_probs=46.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------C--------------CCCCceeeEeecCCCch
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------F--------------PSSAVDHYITFDATNSG 58 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~--------------~~~~v~~~~~~Dl~d~~ 58 (239)
||||||||+|.-|++.|+- .++.- -+|+.+-|...... . ...++. .+.||+.+++
T Consensus 16 ~vTG~tGFlgKVliEklLr-~~p~v-~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~-pi~GDi~~~~ 92 (467)
T KOG1221|consen 16 FVTGATGFLGKVLIEKLLR-TTPDV-KRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVV-PIAGDISEPD 92 (467)
T ss_pred EEEcccchhHHHHHHHHHh-cCcCc-ceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecce-eccccccCcc
Confidence 6999999999999999982 11122 27999988654211 0 125677 9999999753
Q ss_pred ------hHHHHHhcccCcceEEEccc
Q 048469 59 ------NTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 59 ------~~~~~l~~~~~~v~~v~~~a 78 (239)
+++...+. |+.|+|+|
T Consensus 93 LGis~~D~~~l~~e----V~ivih~A 114 (467)
T KOG1221|consen 93 LGISESDLRTLADE----VNIVIHSA 114 (467)
T ss_pred cCCChHHHHHHHhc----CCEEEEee
Confidence 34323332 66667665
No 239
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.18 E-value=2.2e-06 Score=73.35 Aligned_cols=73 Identities=8% Similarity=-0.057 Sum_probs=55.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC---------CCCC-----C--CCCCceeeEeecCCCchhHHHHH
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP---------KQSW-----F--PSSAVDHYITFDATNSGNTTEKL 64 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~---------~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l 64 (239)
|||||++.||++++++|+ +.|++|+.++|+. .... . ...++. ++.+|++|.+++.+.+
T Consensus 10 lITGas~GIG~aia~~la-----~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 10 IVTGAGGGIGRAHALAFA-----AEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV-ANGDDIADWDGAANLV 83 (286)
T ss_pred EEECCCchHHHHHHHHHH-----HCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceE-EEeCCCCCHHHHHHHH
Confidence 699999999999999999 8999999988764 1000 0 123466 8899999999888777
Q ss_pred hccc---CcceEEEcccc
Q 048469 65 SLLF---NEITHVHDPAH 79 (239)
Q Consensus 65 ~~~~---~~v~~v~~~a~ 79 (239)
+.+. ..+|.+++++.
T Consensus 84 ~~~~~~~g~id~lv~nAG 101 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAG 101 (286)
T ss_pred HHHHHhcCCCCEEEECCC
Confidence 6531 23889999883
No 240
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.17 E-value=4.9e-06 Score=72.06 Aligned_cols=72 Identities=10% Similarity=0.034 Sum_probs=55.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--------C-------C--CCCCceeeEeecCCCchhHHHH
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS--------W-------F--PSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~-------~--~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
|||||++.||++++++|+ ..|++|++++|+..+. . . ...++. ++.+|++|+++++++
T Consensus 12 lITGgs~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 12 LVAGATRGAGRGIAVELG-----AAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGI-AVQVDHLVPEQVRAL 85 (305)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHH
Confidence 699999999999999999 8999999999974210 0 0 012456 889999999988877
Q ss_pred Hhccc---CcceEEEccc
Q 048469 64 LSLLF---NEITHVHDPA 78 (239)
Q Consensus 64 l~~~~---~~v~~v~~~a 78 (239)
++.+. ..+|.+++++
T Consensus 86 ~~~~~~~~g~iDilVnnA 103 (305)
T PRK08303 86 VERIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHHHcCCccEEEECC
Confidence 76542 2388999887
No 241
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.17 E-value=2.4e-06 Score=71.89 Aligned_cols=73 Identities=10% Similarity=0.002 Sum_probs=55.8
Q ss_pred CeecccC-hhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc--
Q 048469 1 MVIGIVS-MADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF-- 68 (239)
Q Consensus 1 LVtGatG-~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~-- 68 (239)
|||||+| .||+++++.|+ ..|++|++++|+..... ....++. ++.+|++|++++.++++.+.
T Consensus 21 lItG~sg~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 21 LVTAAAGTGIGSATARRAL-----EEGARVVISDIHERRLGETADELAAELGLGRVE-AVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred EEECCCcccHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEE-EEEccCCCHHHHHHHHHHHHHH
Confidence 6999998 69999999999 89999999998753210 0113577 89999999998887776541
Q ss_pred -CcceEEEcccc
Q 048469 69 -NEITHVHDPAH 79 (239)
Q Consensus 69 -~~v~~v~~~a~ 79 (239)
..++.+++++.
T Consensus 95 ~g~id~li~~ag 106 (262)
T PRK07831 95 LGRLDVLVNNAG 106 (262)
T ss_pred cCCCCEEEECCC
Confidence 22788999884
No 242
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.15 E-value=2.7e-06 Score=73.62 Aligned_cols=72 Identities=11% Similarity=-0.014 Sum_probs=55.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchhHHHHHhccc--Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGNTTEKLSLLF--NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~--~~ 70 (239)
|||||+|+||++++++|+ ++|++|+..+|+..... . ...++. ++.+|++|++++.++++.+. ..
T Consensus 16 lVTGas~gIG~~ia~~L~-----~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~-~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 16 VVTGAAAGLGRAEALGLA-----RLGATVVVNDVASALDASDVLDEIRAAGAKAV-AVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEecCCchhHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHHHHhCC
Confidence 699999999999999999 88999999887542110 0 124577 89999999988877765431 23
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.++|++
T Consensus 90 iD~li~nA 97 (306)
T PRK07792 90 LDIVVNNA 97 (306)
T ss_pred CCEEEECC
Confidence 88999988
No 243
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.14 E-value=1.9e-06 Score=81.87 Aligned_cols=74 Identities=12% Similarity=0.036 Sum_probs=57.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
|||||||+||++++++|. +.|++|++++|++.... ....++. ++.+|++|++++.++++.+. ..
T Consensus 375 lItGas~giG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 375 LITGASSGIGRATAIKVA-----EAGATVFLVARNGEALDELVAEIRAKGGTAH-AYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred EEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999999999 88999999999864210 0124577 89999999999888877531 12
Q ss_pred ceEEEccccc
Q 048469 71 ITHVHDPAHS 80 (239)
Q Consensus 71 v~~v~~~a~y 80 (239)
+|++++++.+
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 7899998843
No 244
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.14 E-value=2.6e-06 Score=70.97 Aligned_cols=73 Identities=11% Similarity=-0.060 Sum_probs=52.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--------CCCCCCceeeEeecCC--CchhHHHHHhccc--
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS--------WFPSSAVDHYITFDAT--NSGNTTEKLSLLF-- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~~Dl~--d~~~~~~~l~~~~-- 68 (239)
|||||+|+||.+++++|+ +.|++|++++|++... .....++. ++.+|++ +.+++.++++.+.
T Consensus 16 lItG~~g~iG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 16 LVTGAGDGIGREAALTYA-----RHGATVILLGRTEEKLEAVYDEIEAAGGPQPA-IIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred EEeCCCchHHHHHHHHHH-----HCCCcEEEEeCCHHHHHHHHHHHHhcCCCCce-EEEecccCCCHHHHHHHHHHHHHH
Confidence 699999999999999999 7899999999986321 00123566 7788886 5556555544332
Q ss_pred -CcceEEEcccc
Q 048469 69 -NEITHVHDPAH 79 (239)
Q Consensus 69 -~~v~~v~~~a~ 79 (239)
..++.|+|++.
T Consensus 90 ~~~id~vi~~Ag 101 (247)
T PRK08945 90 FGRLDGVLHNAG 101 (247)
T ss_pred hCCCCEEEECCc
Confidence 12789999873
No 245
>PRK06484 short chain dehydrogenase; Validated
Probab=98.13 E-value=2.2e-06 Score=79.24 Aligned_cols=73 Identities=5% Similarity=-0.046 Sum_probs=56.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||+|.||++++++|. ++|++|++++|++.... ....++. .+.+|++|++++.++++.+. ..+|.
T Consensus 273 lItGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 273 AITGGARGIGRAVADRFA-----AAGDRLLIIDRDAEGAKKLAEALGDEHL-SVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999 89999999999753210 0123456 78999999998888776542 23889
Q ss_pred EEcccc
Q 048469 74 VHDPAH 79 (239)
Q Consensus 74 v~~~a~ 79 (239)
++|++.
T Consensus 347 li~nAg 352 (520)
T PRK06484 347 LVNNAG 352 (520)
T ss_pred EEECCC
Confidence 999883
No 246
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.13 E-value=2.2e-06 Score=81.98 Aligned_cols=73 Identities=12% Similarity=0.029 Sum_probs=56.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+|+||++++++|+ +.|++|++++|+..... .....+. .+.+|++|++++.+++..+.
T Consensus 418 LVTGasggIG~aiA~~La-----~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~-~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 418 FVTGGAGGIGRETARRLA-----AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAV-ALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred EEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEE-EEECCCCCHHHHHHHHHHHHHhc
Confidence 699999999999999999 88999999999753210 0113466 88999999999988877541
Q ss_pred CcceEEEcccc
Q 048469 69 NEITHVHDPAH 79 (239)
Q Consensus 69 ~~v~~v~~~a~ 79 (239)
..+|.++|++.
T Consensus 492 g~iDilV~nAG 502 (676)
T TIGR02632 492 GGVDIVVNNAG 502 (676)
T ss_pred CCCcEEEECCC
Confidence 12788999883
No 247
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.12 E-value=5.7e-06 Score=69.68 Aligned_cols=74 Identities=11% Similarity=0.044 Sum_probs=55.9
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCchhHHHHHhccc--
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNSGNTTEKLSLLF-- 68 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~-- 68 (239)
+||||+ +.||++++++|. +.|++|+.+.|+..... ....++. ++.+|++|++++.++++.+.
T Consensus 11 lItGa~~s~GIG~aia~~la-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 11 VVMGVANKRSIAWGIARSLH-----NAGAKLVFTYAGERLEKEVRELADTLEGQESL-LLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred EEECCCCCCCHHHHHHHHHH-----HCCCEEEEecCcccchHHHHHHHHHcCCCceE-EEecCCCCHHHHHHHHHHHHHh
Confidence 699997 899999999999 89999999887532110 1124577 88999999998887776542
Q ss_pred -CcceEEEccccc
Q 048469 69 -NEITHVHDPAHS 80 (239)
Q Consensus 69 -~~v~~v~~~a~y 80 (239)
..+|.+++++.+
T Consensus 85 ~g~ld~lv~nag~ 97 (257)
T PRK08594 85 VGVIHGVAHCIAF 97 (257)
T ss_pred CCCccEEEECccc
Confidence 238899998843
No 248
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.12 E-value=2.4e-06 Score=71.42 Aligned_cols=74 Identities=11% Similarity=-0.089 Sum_probs=52.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC-CCCC-------CCCCCceeeEeecCCCchhHHHHHhccc----
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP-KQSW-------FPSSAVDHYITFDATNSGNTTEKLSLLF---- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---- 68 (239)
|||||+|+||++++++|. +.|++|+.+.++. .... .....+. .+.+|+++.+++...+..+.
T Consensus 8 lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 8 LVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred EEeCCCChHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHHHhcCCceE-EEecccCCHHHHHHHHHHHHHHhh
Confidence 699999999999999999 8999998875432 2100 0123456 78899999887766554321
Q ss_pred -----CcceEEEccccc
Q 048469 69 -----NEITHVHDPAHS 80 (239)
Q Consensus 69 -----~~v~~v~~~a~y 80 (239)
..+|.++|++.+
T Consensus 82 ~~~g~~~id~lv~~Ag~ 98 (252)
T PRK12747 82 NRTGSTKFDILINNAGI 98 (252)
T ss_pred hhcCCCCCCEEEECCCc
Confidence 138899998844
No 249
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.11 E-value=8.7e-06 Score=67.31 Aligned_cols=69 Identities=19% Similarity=0.127 Sum_probs=53.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C-------CCCCceeeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F-------PSSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~-------~~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
||||-||.=|+.|++-|+ ..||+|+++.|++.... + ...... ..-+|++|...+.+.+..+
T Consensus 32 LITGItGQDGSYLaEfLL-----~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mk-LHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 32 LITGITGQDGSYLAEFLL-----SKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMK-LHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred EEecccCCCchHHHHHHH-----hCCceeeEEEeeccccchhhhhhhhcCchhcccceeE-EeeccccchHHHHHHHhcc
Confidence 699999999999999999 89999999999865321 0 112345 6679999999988888876
Q ss_pred cCcceEEEcc
Q 048469 68 FNEITHVHDP 77 (239)
Q Consensus 68 ~~~v~~v~~~ 77 (239)
. ++.|++.
T Consensus 106 k--PtEiYnL 113 (376)
T KOG1372|consen 106 K--PTEVYNL 113 (376)
T ss_pred C--chhhhhh
Confidence 5 4555543
No 250
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.09 E-value=5.3e-06 Score=69.62 Aligned_cols=72 Identities=14% Similarity=0.005 Sum_probs=53.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCC----CCcEEEEEecCCCCCC-----C----CCCCceeeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALG----GPWEVYGSAWCPKQSW-----F----PSSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~----~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
|||||||.||.+++++|. + .|++|+.++|+..... + ...++. ++.+|++|+++++++++.+
T Consensus 4 lItGas~GIG~~~a~~la-----~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~~~~~v~~~~~~~ 77 (256)
T TIGR01500 4 LVTGASRGFGRTIAQELA-----KCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVV-RVSLDLGAEAGLEQLLKAL 77 (256)
T ss_pred EEecCCCchHHHHHHHHH-----HhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEE-EEEeccCCHHHHHHHHHHH
Confidence 699999999999999998 5 7999999999754210 0 123577 8999999999888777654
Q ss_pred cCc-------ceEEEccc
Q 048469 68 FNE-------ITHVHDPA 78 (239)
Q Consensus 68 ~~~-------v~~v~~~a 78 (239)
... .+.+++++
T Consensus 78 ~~~~g~~~~~~~~lv~nA 95 (256)
T TIGR01500 78 RELPRPKGLQRLLLINNA 95 (256)
T ss_pred HhccccCCCceEEEEeCC
Confidence 210 24778877
No 251
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.08 E-value=4.9e-06 Score=69.98 Aligned_cols=74 Identities=12% Similarity=0.060 Sum_probs=56.0
Q ss_pred Ceecc--cChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGI--VSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGa--tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
+|||| ++.||.+++++|. ++|++|+.++|+..... .....+. ++.+|++|+++++++++.+. .
T Consensus 11 lItGa~~s~GIG~a~a~~la-----~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 11 LVTGVITDSSIAFHVARVAQ-----EQGAEVVLTGFGRALRLTERIAKRLPEPAP-VLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred EEeCCCCcchHHHHHHHHHH-----HCCCEEEEecCccchhHHHHHHHhcCCCCc-EEeCCCCCHHHHHHHHHHHHHHcC
Confidence 69999 8999999999999 89999999987642110 0123567 89999999998887766432 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|++++++.+
T Consensus 85 ~iD~li~nAG~ 95 (256)
T PRK07889 85 GLDGVVHSIGF 95 (256)
T ss_pred CCcEEEEcccc
Confidence 38999998843
No 252
>PRK05599 hypothetical protein; Provisional
Probab=98.07 E-value=4.9e-06 Score=69.52 Aligned_cols=71 Identities=18% Similarity=0.144 Sum_probs=54.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C---CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F---PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||++.||.+++++|. + |++|+.++|+..... + ....+. ++.+|++|++++++++..+. .
T Consensus 4 lItGas~GIG~aia~~l~-----~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 4 LILGGTSDIAGEIATLLC-----H-GEDVVLAARRPEAAQGLASDLRQRGATSVH-VLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred EEEeCccHHHHHHHHHHh-----C-CCEEEEEeCCHHHHHHHHHHHHhccCCceE-EEEcccCCHHHHHHHHHHHHHhcC
Confidence 699999999999999998 5 899999999754210 0 112467 89999999998887766532 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|++++++
T Consensus 77 ~id~lv~na 85 (246)
T PRK05599 77 EISLAVVAF 85 (246)
T ss_pred CCCEEEEec
Confidence 388898877
No 253
>PRK06484 short chain dehydrogenase; Validated
Probab=98.07 E-value=4.2e-06 Score=77.42 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-C---CCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-F---PSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~---~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||++.||.+++++|. +.|++|++++|+..... . ...++. ++.+|++|+++++++++.+. ..+|+
T Consensus 9 lITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 9 LVTGAAGGIGRAACQRFA-----RAGDQVVVADRNVERARERADSLGPDHH-ALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred EEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999 89999999999754210 0 123466 89999999999888876542 23888
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
++|++
T Consensus 83 li~na 87 (520)
T PRK06484 83 LVNNA 87 (520)
T ss_pred EEECC
Confidence 99887
No 254
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.07 E-value=6.1e-06 Score=65.97 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=52.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCC-CCC---------CCCCCceeeEeecCCCchhHHHHHhccc-
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPK-QSW---------FPSSAVDHYITFDATNSGNTTEKLSLLF- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~-~~~---------~~~~~v~~~~~~Dl~d~~~~~~~l~~~~- 68 (239)
|||||+|.+|..+++.|. .++ -+|+.++|++. ... ....++. ++.+|++|++++.++++.+.
T Consensus 4 litGG~gglg~~la~~La-----~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~-~~~~Dv~d~~~v~~~~~~~~~ 77 (181)
T PF08659_consen 4 LITGGLGGLGQSLARWLA-----ERGARRLILLGRSGAPSAEAEAAIRELESAGARVE-YVQCDVTDPEAVAAALAQLRQ 77 (181)
T ss_dssp EEETTTSHHHHHHHHHHH-----HTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEE-EEE--TTSHHHHHHHHHTSHT
T ss_pred EEECCccHHHHHHHHHHH-----HcCCCEEEEeccCCCccHHHHHHHHHHHhCCCcee-eeccCccCHHHHHHHHHHHHh
Confidence 699999999999999999 555 47999999832 111 0134677 99999999999999998764
Q ss_pred --CcceEEEccc
Q 048469 69 --NEITHVHDPA 78 (239)
Q Consensus 69 --~~v~~v~~~a 78 (239)
..|+.|||++
T Consensus 78 ~~~~i~gVih~a 89 (181)
T PF08659_consen 78 RFGPIDGVIHAA 89 (181)
T ss_dssp TSS-EEEEEE--
T ss_pred ccCCcceeeeee
Confidence 2377888887
No 255
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.06 E-value=5.7e-06 Score=68.55 Aligned_cols=72 Identities=14% Similarity=-0.016 Sum_probs=50.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--------CCCCCceeeEeecCCCc--hhHHHHHh----c
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--------FPSSAVDHYITFDATNS--GNTTEKLS----L 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~~Dl~d~--~~~~~~l~----~ 66 (239)
+||||+|+||+++++.|. ++|++|++++|++.... .....+. ++.+|+.|. +++.+.+. .
T Consensus 10 lItG~sggiG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 10 LVTGASQGLGEQVAKAYA-----AAGATVILVARHQKKLEKVYDAIVEAGHPEPF-AIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred EEECCCCcHHHHHHHHHH-----HcCCEEEEEeCChHHHHHHHHHHHHcCCCCcc-eEEeeecccchHHHHHHHHHHHHH
Confidence 699999999999999999 88999999999864210 0123456 788999763 34444332 2
Q ss_pred ccCcceEEEccc
Q 048469 67 LFNEITHVHDPA 78 (239)
Q Consensus 67 ~~~~v~~v~~~a 78 (239)
....++++++++
T Consensus 84 ~~~~id~vi~~a 95 (239)
T PRK08703 84 TQGKLDGIVHCA 95 (239)
T ss_pred hCCCCCEEEEec
Confidence 211278899887
No 256
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.04 E-value=4.3e-06 Score=69.24 Aligned_cols=73 Identities=3% Similarity=-0.146 Sum_probs=55.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------CCCCCceeeEeecCCCchhHHHHHhcc----cC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------FPSSAVDHYITFDATNSGNTTEKLSLL----FN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~ 69 (239)
+||||++.||++++++|. +.|++|++++|+..... ....++. .+.+|++|++++++.++.+ ..
T Consensus 9 lVtGas~GIG~aia~~la-----~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 9 LITSAGSVLGRTISCHFA-----RLGATLILCDQDQSALKDTYEQCSALTDNVY-SFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred EEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeE-EEEccCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999 89999999999764210 0123456 7889999999887776543 20
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.+|.+++++.
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 3889999873
No 257
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.04 E-value=3.7e-06 Score=67.11 Aligned_cols=60 Identities=13% Similarity=0.017 Sum_probs=47.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
+|||||||+|. +++.|. ..||+|++++|++.... . ....+. ++.+|++|++++.++++++
T Consensus 4 lVtGGtG~gg~-la~~L~-----~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~-~~~~Dv~d~~sv~~~i~~~ 69 (177)
T PRK08309 4 LVIGGTGMLKR-VSLWLC-----EKGFHVSVIARREVKLENVKRESTTPESIT-PLPLDYHDDDALKLAIKST 69 (177)
T ss_pred EEECcCHHHHH-HHHHHH-----HCcCEEEEEECCHHHHHHHHHHhhcCCcEE-EEEccCCCHHHHHHHHHHH
Confidence 69999998876 999999 89999999999753210 0 124577 8899999999988887754
No 258
>PRK08324 short chain dehydrogenase; Validated
Probab=98.04 E-value=2.5e-06 Score=81.73 Aligned_cols=72 Identities=11% Similarity=-0.007 Sum_probs=56.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
|||||+|+||+++++.|. ..|++|++++|++.... . ...++. ++.+|++|++++.++++.+. ..+
T Consensus 426 LVTGasggIG~~la~~L~-----~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~-~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 426 LVTGAAGGIGKATAKRLA-----AEGACVVLADLDEEAAEAAAAELGGPDRAL-GVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred EEecCCCHHHHHHHHHHH-----HCcCEEEEEeCCHHHHHHHHHHHhccCcEE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999 88999999999864210 0 013677 89999999998888776531 127
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
|.|++++
T Consensus 500 DvvI~~A 506 (681)
T PRK08324 500 DIVVSNA 506 (681)
T ss_pred CEEEECC
Confidence 8899887
No 259
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=5.2e-06 Score=70.57 Aligned_cols=73 Identities=8% Similarity=0.038 Sum_probs=54.6
Q ss_pred CeecccC--hhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVS--MADLSFTEALKSPIALGGPWEVYGSAWCPKQS----WF--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG--~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||++ .||++++++|. +.|++|+...|+.... .. ...... ++.+|++|++++.++++.+. +
T Consensus 11 lVTGas~~~GIG~aiA~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~-~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 11 LIMGVANDHSIAWGIAKQLA-----AQGAELAFTYQGEALGKRVKPLAESLGSDF-VLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred EEeCCCCCCcHHHHHHHHHH-----hCCCEEEEecCchHHHHHHHHHHHhcCCce-EEeCCCCCHHHHHHHHHHHHHHhC
Confidence 6999997 99999999999 8999999988864210 00 012234 78999999998887776542 2
Q ss_pred cceEEEcccc
Q 048469 70 EITHVHDPAH 79 (239)
Q Consensus 70 ~v~~v~~~a~ 79 (239)
.+|+++++|.
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 3899999883
No 260
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.02 E-value=1.1e-05 Score=67.94 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=54.8
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-------C--CCCCceeeEeecCCCchhHHHHHhccc-
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-------F--PSSAVDHYITFDATNSGNTTEKLSLLF- 68 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~- 68 (239)
|||||+ +.||++++++|. +.|++|+...|+..... . ....+. ++.+|++|++++.++++.+.
T Consensus 10 lItGas~~~GIG~aia~~la-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 10 LVTGIANNRSIAWGIAQQLH-----AAGAELGITYLPDEKGRFEKKVRELTEPLNPSL-FLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred EEeCCCCCCchHHHHHHHHH-----HCCCEEEEEecCcccchHHHHHHHHHhccCcce-EeecCcCCHHHHHHHHHHHHH
Confidence 699986 799999999999 89999988766432110 0 112456 88999999999888776542
Q ss_pred --CcceEEEccccc
Q 048469 69 --NEITHVHDPAHS 80 (239)
Q Consensus 69 --~~v~~v~~~a~y 80 (239)
..+|++++++.+
T Consensus 84 ~~g~iD~lv~nag~ 97 (258)
T PRK07370 84 KWGKLDILVHCLAF 97 (258)
T ss_pred HcCCCCEEEEcccc
Confidence 238999998843
No 261
>PRK06720 hypothetical protein; Provisional
Probab=98.02 E-value=6.4e-06 Score=65.27 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=54.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc---Cc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF---NE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~ 70 (239)
+||||+|.||+++++.|. +.|++|+.+.|+..... . ....+. ++.+|+++.+++.+.++.+. ..
T Consensus 20 lVTGa~~GIG~aia~~l~-----~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 20 IVTGGGIGIGRNTALLLA-----KQGAKVIVTDIDQESGQATVEEITNLGGEAL-FVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred EEecCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 699999999999999999 78999999998753210 0 123456 78999999988777654321 23
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
+|.+++++
T Consensus 94 iDilVnnA 101 (169)
T PRK06720 94 IDMLFQNA 101 (169)
T ss_pred CCEEEECC
Confidence 88899987
No 262
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.00 E-value=6e-06 Score=70.25 Aligned_cols=70 Identities=11% Similarity=0.063 Sum_probs=52.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--CCCCceeeEeecCCCchhHHHHHhccc--Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--PSSAVDHYITFDATNSGNTTEKLSLLF--NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~--~~v 71 (239)
+|||| |+||++++++|. .|++|++++|+..... + ...++. ++.+|++|++++.++++.+. ..+
T Consensus 6 lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 6 VVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVS-TQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred EEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHHHHHhcCCC
Confidence 58998 689999999987 4899999999753210 0 123567 89999999998888776531 238
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
|.+++++
T Consensus 78 d~li~nA 84 (275)
T PRK06940 78 TGLVHTA 84 (275)
T ss_pred CEEEECC
Confidence 8999988
No 263
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.99 E-value=1e-05 Score=68.51 Aligned_cols=74 Identities=11% Similarity=-0.008 Sum_probs=55.6
Q ss_pred CeecccC--hhHHHHHHHhhcCCCCCCCcEEEEEecCCCC-C---C--CCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVS--MADLSFTEALKSPIALGGPWEVYGSAWCPKQ-S---W--FPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG--~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~---~--~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||++ .||++++++|. ++|++|+...|+... . . ...+.+. ++.+|++|++++++++..+. .
T Consensus 10 lITGas~~~GIG~aia~~la-----~~G~~vil~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 10 LVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred EEeCCCCCccHHHHHHHHHH-----HCCCEEEEEecchhHHHHHHHHHhccCCce-EeecCCCCHHHHHHHHHHHHhhcC
Confidence 6999985 89999999999 899999988886310 0 0 0123456 88999999999888876542 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|.+++++.+
T Consensus 84 ~iD~linnAg~ 94 (262)
T PRK07984 84 KFDGFVHSIGF 94 (262)
T ss_pred CCCEEEECCcc
Confidence 38899998844
No 264
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.97 E-value=8.2e-06 Score=71.15 Aligned_cols=72 Identities=11% Similarity=0.100 Sum_probs=51.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C--C--CCCceeeEeecCCC--chhHHH---HHhc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F--P--SSAVDHYITFDATN--SGNTTE---KLSL 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~--~--~~~v~~~~~~Dl~d--~~~~~~---~l~~ 66 (239)
+||||||.||++++++|. ++|++|++++|++.... . . ..++. .+.+|+++ .+.+.+ .+.+
T Consensus 57 lITGAs~GIG~alA~~La-----~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 57 LVTGPTDGIGKGFAFQLA-----RKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIK-TVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEE-EEEEECCCCcHHHHHHHHHHhcC
Confidence 699999999999999999 88999999999864210 0 0 12466 78899985 233333 3333
Q ss_pred ccCcceEEEccccc
Q 048469 67 LFNEITHVHDPAHS 80 (239)
Q Consensus 67 ~~~~v~~v~~~a~y 80 (239)
. + ++.++++|.+
T Consensus 131 ~-d-idilVnnAG~ 142 (320)
T PLN02780 131 L-D-VGVLINNVGV 142 (320)
T ss_pred C-C-ccEEEEecCc
Confidence 3 3 7789998843
No 265
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.97 E-value=9.3e-06 Score=68.33 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=55.3
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQS----WF--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+ +.||++++++|+ +.|++|+...|+.... .. ....+. ++.+|++|++++.++++.+. .
T Consensus 14 lItGas~g~GIG~a~a~~la-----~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 14 LVVGIANEQSIAWGCARAFR-----ALGAELAVTYLNDKARPYVEPLAEELDAPI-FLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred EEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCChhhHHHHHHHHHhhccce-EEecCcCCHHHHHHHHHHHHHHcC
Confidence 699998 599999999999 8999999998874311 00 112345 88999999998887766542 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|.+++++.+
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 38899998843
No 266
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.94 E-value=9.3e-06 Score=73.92 Aligned_cols=74 Identities=14% Similarity=0.014 Sum_probs=55.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCC----CCCCceeeEeecCCCchhHHHHHhccc---CcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWF----PSSAVDHYITFDATNSGNTTEKLSLLF---NEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~ 73 (239)
|||||+|.||.++++.|. +.|++|++++|....... ...+.. ++.+|++|++++.+.+..+. ..+|.
T Consensus 214 lItGasggIG~~la~~l~-----~~Ga~vi~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 214 LVTGAARGIGAAIAEVLA-----RDGAHVVCLDVPAAGEALAAVANRVGGT-ALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred EEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 699999999999999999 889999999885322110 112346 88999999998887776542 13789
Q ss_pred EEccccc
Q 048469 74 VHDPAHS 80 (239)
Q Consensus 74 v~~~a~y 80 (239)
++|++.+
T Consensus 288 vi~~AG~ 294 (450)
T PRK08261 288 VVHNAGI 294 (450)
T ss_pred EEECCCc
Confidence 9998843
No 267
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.89 E-value=1.6e-05 Score=67.04 Aligned_cols=74 Identities=8% Similarity=0.000 Sum_probs=54.2
Q ss_pred Ceecc--cChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC----CC--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGI--VSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS----WF--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGa--tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
||||| ++.||++++++|. +.|++|+...|+.... .. ...... .+.+|++|++++.++++.+. .
T Consensus 10 lITGa~~~~GIG~a~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 10 LITGMISERSIAYGIAKACR-----EQGAELAFTYVVDKLEERVRKMAAELDSEL-VFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred EEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCcHHHHHHHHHHHhccCCce-EEECCCCCHHHHHHHHHHHHHHhC
Confidence 69997 6799999999999 8999999887653110 00 112345 78999999999888776542 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|.+++++.+
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 38999999843
No 268
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.87 E-value=8.7e-05 Score=58.52 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=42.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSL 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~ 66 (239)
+|.||||-.|+.|++++++ ...+ +|+++.|+..+....+..+. ....|...-+++.....+
T Consensus 22 fvlGAtG~~G~~llk~~~E----~~~FSKV~~i~RR~~~d~at~k~v~-q~~vDf~Kl~~~a~~~qg 83 (238)
T KOG4039|consen 22 FVLGATGLCGGGLLKHAQE----APQFSKVYAILRRELPDPATDKVVA-QVEVDFSKLSQLATNEQG 83 (238)
T ss_pred EEEeccccccHHHHHHHHh----cccceeEEEEEeccCCCccccceee-eEEechHHHHHHHhhhcC
Confidence 5899999999999999983 2335 59999998543222345555 677777655555555554
No 269
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.87 E-value=1.7e-05 Score=67.52 Aligned_cols=73 Identities=10% Similarity=0.032 Sum_probs=54.7
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC-CC---C--C-CCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQ-SW---F--P-SSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~---~--~-~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
|||||+ +.||+++++.|. +.|++|+...|+... .. . . ... . ++.+|++|.+++.++++.+.
T Consensus 9 lItGas~~~GIG~aiA~~la-----~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~-~~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 9 LIVGVANNKSIAYGIAKACF-----EQGAELAFTYLNEALKKRVEPIAQELGSD-Y-VYELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred EEECCCCCCCHHHHHHHHHH-----HCCCEEEEEecCHHHHHHHHHHHHhcCCc-e-EEEecCCCHHHHHHHHHHHHHHc
Confidence 699997 799999999999 899999998887420 00 0 0 112 5 78999999998887776542
Q ss_pred CcceEEEccccc
Q 048469 69 NEITHVHDPAHS 80 (239)
Q Consensus 69 ~~v~~v~~~a~y 80 (239)
..+|+++++|.+
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 238999998843
No 270
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.85 E-value=1.8e-05 Score=67.34 Aligned_cols=74 Identities=11% Similarity=0.043 Sum_probs=54.8
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC-CC---C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQ-SW---F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~---~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||+ +.||++++++|. +.|++|+...|+... .. + ....+. .+.+|++|+++++++++.+. .
T Consensus 14 lItGas~~~GIG~aia~~la-----~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 14 LILGVANNRSIAWGIAKACR-----AAGAELAFTYQGDALKKRVEPLAAELGAFV-AGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred EEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHHHhcCCce-EEecCCCCHHHHHHHHHHHHHhcC
Confidence 699997 899999999999 899999888775310 00 0 112345 78999999999888776542 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|+++++|.+
T Consensus 88 ~iD~lv~nAG~ 98 (272)
T PRK08159 88 KLDFVVHAIGF 98 (272)
T ss_pred CCcEEEECCcc
Confidence 38999998843
No 271
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.84 E-value=3.2e-05 Score=64.93 Aligned_cols=72 Identities=14% Similarity=0.168 Sum_probs=52.4
Q ss_pred CeecccC--hhHHHHHHHhhcCCCCCCCcEEEEEecCCC---C-----C----C----C--CCCCceeeEeecCCCchhH
Q 048469 1 MVIGIVS--MADLSFTEALKSPIALGGPWEVYGSAWCPK---Q-----S----W----F--PSSAVDHYITFDATNSGNT 60 (239)
Q Consensus 1 LVtGatG--~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~---~-----~----~----~--~~~~v~~~~~~Dl~d~~~~ 60 (239)
||||||| .||++++++|+ ..|++|+...|+.. . . . . ...++. ++.+|++|.+++
T Consensus 10 lVtGas~~~giG~~~a~~l~-----~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D~~~~~~i 83 (256)
T PRK12859 10 VVTGVSRLDGIGAAICKELA-----EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVS-SMELDLTQNDAP 83 (256)
T ss_pred EEECCCCCCChHHHHHHHHH-----HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHH
Confidence 6999995 79999999999 89999988754310 0 0 0 0 123566 889999999988
Q ss_pred HHHHhccc---CcceEEEccc
Q 048469 61 TEKLSLLF---NEITHVHDPA 78 (239)
Q Consensus 61 ~~~l~~~~---~~v~~v~~~a 78 (239)
.+++..+. ..++++++++
T Consensus 84 ~~~~~~~~~~~g~id~li~~a 104 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNA 104 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECC
Confidence 87776432 1278999987
No 272
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.83 E-value=2e-05 Score=66.40 Aligned_cols=74 Identities=9% Similarity=0.021 Sum_probs=53.7
Q ss_pred CeecccC--hhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC----CC-CC-CCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVS--MADLSFTEALKSPIALGGPWEVYGSAWCPKQS----WF-PS-SAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG--~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~-~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
|||||++ .||+++++.|. ++|++|+...|+.... .+ .. .... ++.+|++|++++.++++.+. .
T Consensus 12 lITGas~~~GIG~a~a~~la-----~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~-~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 12 LITGIANNMSISWAIAQLAK-----KHGAELWFTYQSEVLEKRVKPLAEEIGCNF-VSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred EEECCCCCcchHHHHHHHHH-----HcCCEEEEEeCchHHHHHHHHHHHhcCCce-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 6999997 79999999999 8999999888763110 00 11 2234 67899999999888776532 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|.+++++.+
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 38888888743
No 273
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.77 E-value=4.2e-05 Score=62.05 Aligned_cols=72 Identities=8% Similarity=0.099 Sum_probs=55.9
Q ss_pred Ceec-ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CC-CCCCceeeEeecCCCchhHHHHHhccc----CcceE
Q 048469 1 MVIG-IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WF-PSSAVDHYITFDATNSGNTTEKLSLLF----NEITH 73 (239)
Q Consensus 1 LVtG-atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~----~~v~~ 73 (239)
|||| ++|.||.+|++++. +.||.|++.+|+..+- .+ .+.++. ....|+++++++.+....+. +.+|.
T Consensus 11 lItgcs~GGIG~ala~ef~-----~~G~~V~AtaR~~e~M~~L~~~~gl~-~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 11 LITGCSSGGIGYALAKEFA-----RNGYLVYATARRLEPMAQLAIQFGLK-PYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred EEeecCCcchhHHHHHHHH-----hCCeEEEEEccccchHhhHHHhhCCe-eEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4565 46999999999999 8999999999986542 22 256788 99999999999888776553 24667
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
++++|
T Consensus 85 L~NNA 89 (289)
T KOG1209|consen 85 LYNNA 89 (289)
T ss_pred EEcCC
Confidence 77766
No 274
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.77 E-value=2.7e-05 Score=65.69 Aligned_cols=74 Identities=9% Similarity=0.025 Sum_probs=53.6
Q ss_pred Ceecc--cChhHHHHHHHhhcCCCCCCCcEEEEEecCCC-CCC---C--CCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGI--VSMADLSFTEALKSPIALGGPWEVYGSAWCPK-QSW---F--PSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGa--tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~-~~~---~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
||||| ++.||.+++++|+ +.|++|+.+.|... ... . ...... ++.+|++|+++++++++.+. .
T Consensus 10 lItGas~~~GIG~a~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 10 LITGLLSNRSIAYGIAKACK-----REGAELAFTYVGDRFKDRITEFAAEFGSDL-VFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred EEeCCCCCCcHHHHHHHHHH-----HCCCeEEEEccchHHHHHHHHHHHhcCCcc-eeeccCCCHHHHHHHHHHHHHHhC
Confidence 69996 6799999999999 89999988765421 000 0 112334 78899999999888876542 2
Q ss_pred cceEEEccccc
Q 048469 70 EITHVHDPAHS 80 (239)
Q Consensus 70 ~v~~v~~~a~y 80 (239)
.+|++++++.+
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 38999998833
No 275
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.74 E-value=2.7e-05 Score=66.43 Aligned_cols=70 Identities=17% Similarity=0.097 Sum_probs=54.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC------C--CCCCceeeEeecCCCchh----HHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW------F--PSSAVDHYITFDATNSGN----TTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~~Dl~d~~~----~~~~l~~~~ 68 (239)
.|||||..||++.+++|. ++|++|+.++|+..... . ..-++. .+..|.++++. +.+.+.+++
T Consensus 53 VVTGaTDGIGKayA~eLA-----krG~nvvLIsRt~~KL~~v~kEI~~~~~vev~-~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 53 VVTGATDGIGKAYARELA-----KRGFNVVLISRTQEKLEAVAKEIEEKYKVEVR-IIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred EEECCCCcchHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEE-EEEEecCCCchhHHHHHHHhcCCc
Confidence 489999999999999999 89999999999875311 0 123466 89999998764 555666664
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
|..+++++
T Consensus 127 --VgILVNNv 134 (312)
T KOG1014|consen 127 --VGILVNNV 134 (312)
T ss_pred --eEEEEecc
Confidence 77888887
No 276
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.72 E-value=6.6e-05 Score=65.23 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=57.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---------CCCCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---------WFPSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
+|||||..||.+.+++|. .+|.+|+...|+.... ......+. ++++|+++..++++..+...
T Consensus 39 vVTGansGIG~eta~~La-----~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~-~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 39 LVTGATSGIGFETARELA-----LRGAHVVLACRNEERGEEAKEQIQKGKANQKIR-VIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred EEECCCCchHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceE-EEECCCCCHHHHHHHHHHHHhcC
Confidence 599999999999999999 8999999999986321 11245677 89999999999888766542
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
...++++++|
T Consensus 113 ~~ldvLInNA 122 (314)
T KOG1208|consen 113 GPLDVLINNA 122 (314)
T ss_pred CCccEEEeCc
Confidence 2367888887
No 277
>PRK09620 hypothetical protein; Provisional
Probab=97.60 E-value=9.3e-05 Score=61.49 Aligned_cols=67 Identities=7% Similarity=-0.206 Sum_probs=42.4
Q ss_pred cChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccccc
Q 048469 6 VSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPAHS 80 (239)
Q Consensus 6 tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a~y 80 (239)
|||+|++|+++|+ .+|++|+.+++...... .....+. .+..|....+.+.+.++... +|.|+|+|..
T Consensus 28 SGfiGs~LA~~L~-----~~Ga~V~li~g~~~~~~~~~~~~~~~~-~V~s~~d~~~~l~~~~~~~~--~D~VIH~AAv 97 (229)
T PRK09620 28 KGTIGRIIAEELI-----SKGAHVIYLHGYFAEKPNDINNQLELH-PFEGIIDLQDKMKSIITHEK--VDAVIMAAAG 97 (229)
T ss_pred cCHHHHHHHHHHH-----HCCCeEEEEeCCCcCCCcccCCceeEE-EEecHHHHHHHHHHHhcccC--CCEEEECccc
Confidence 5999999999999 89999998886422111 0012233 45553333356666665432 6888888843
No 278
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.54 E-value=0.00021 Score=59.34 Aligned_cols=68 Identities=12% Similarity=-0.007 Sum_probs=43.5
Q ss_pred cccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhc-ccCcceEEEccccc
Q 048469 4 GIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSL-LFNEITHVHDPAHS 80 (239)
Q Consensus 4 GatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~-~~~~v~~v~~~a~y 80 (239)
.+||++|++|+++|+ .+||+|++++|..........+++ ++.++ ..+++.+.+.. +.+ +|.++|+|..
T Consensus 23 ~SSG~iG~aLA~~L~-----~~G~~V~li~r~~~~~~~~~~~v~-~i~v~--s~~~m~~~l~~~~~~-~DivIh~AAv 91 (229)
T PRK06732 23 HSTGQLGKIIAETFL-----AAGHEVTLVTTKTAVKPEPHPNLS-IIEIE--NVDDLLETLEPLVKD-HDVLIHSMAV 91 (229)
T ss_pred ccchHHHHHHHHHHH-----hCCCEEEEEECcccccCCCCCCeE-EEEEe--cHHHHHHHHHHHhcC-CCEEEeCCcc
Confidence 478999999999999 899999999886432111124667 66654 23332233221 223 6788888844
No 279
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.54 E-value=8.8e-05 Score=61.72 Aligned_cols=74 Identities=14% Similarity=0.038 Sum_probs=54.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---C---CCC----CCceeeEeecCCC-chhHHHHHhcccC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---W---FPS----SAVDHYITFDATN-SGNTTEKLSLLFN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~---~~~----~~v~~~~~~Dl~d-~~~~~~~l~~~~~ 69 (239)
|||||++.||.++++.|. .+|++|+++.|+.... . ... ..+. +..+|+++ .++++.++..+..
T Consensus 9 lITGas~GiG~aia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 9 LVTGASSGIGRAIARALA-----REGARVVVAARRSEEEAAEALAAAIKEAGGGRAA-AVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred EEeCCCCHHHHHHHHHHH-----HCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEE-EEEecCCCCHHHHHHHHHHHHH
Confidence 699999999999999999 8999999888875421 0 011 2456 78899998 8877776665432
Q ss_pred ---cceEEEccccc
Q 048469 70 ---EITHVHDPAHS 80 (239)
Q Consensus 70 ---~v~~v~~~a~y 80 (239)
.+|.+++++.+
T Consensus 83 ~~g~id~lvnnAg~ 96 (251)
T COG1028 83 EFGRIDILVNNAGI 96 (251)
T ss_pred HcCCCCEEEECCCC
Confidence 27777887743
No 280
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.47 E-value=0.00022 Score=60.73 Aligned_cols=71 Identities=7% Similarity=-0.096 Sum_probs=55.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhcc----cCc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLL----FNE 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~----~~~ 70 (239)
|||||++.+|+.++.++. ++|..+...+.+..... . ...++. ...||++|.+++.+..+.+ .+
T Consensus 42 LITGgg~GlGr~ialefa-----~rg~~~vl~Din~~~~~etv~~~~~~g~~~-~y~cdis~~eei~~~a~~Vk~e~G~- 114 (300)
T KOG1201|consen 42 LITGGGSGLGRLIALEFA-----KRGAKLVLWDINKQGNEETVKEIRKIGEAK-AYTCDISDREEIYRLAKKVKKEVGD- 114 (300)
T ss_pred EEeCCCchHHHHHHHHHH-----HhCCeEEEEeccccchHHHHHHHHhcCcee-EEEecCCCHHHHHHHHHHHHHhcCC-
Confidence 699999999999999999 88988888887764321 0 113577 8999999999877666543 34
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
|+.++++|
T Consensus 115 V~ILVNNA 122 (300)
T KOG1201|consen 115 VDILVNNA 122 (300)
T ss_pred ceEEEecc
Confidence 88899988
No 281
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.46 E-value=0.00034 Score=59.10 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=53.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
||+||||. |+.|++.|. ..||+|++..|+..... ....+.. .+..+..|.+++.+.+++.+ ++.|+.++
T Consensus 4 LvlGGT~e-gr~la~~L~-----~~g~~v~~s~~t~~~~~~~~~~g~~-~v~~g~l~~~~l~~~l~~~~--i~~VIDAt 73 (256)
T TIGR00715 4 LLMGGTVD-SRAIAKGLI-----AQGIEILVTVTTSEGKHLYPIHQAL-TVHTGALDPQELREFLKRHS--IDILVDAT 73 (256)
T ss_pred EEEechHH-HHHHHHHHH-----hCCCeEEEEEccCCccccccccCCc-eEEECCCCHHHHHHHHHhcC--CCEEEEcC
Confidence 69999999 999999999 78999999999875322 1223344 56677788888988998764 77777665
No 282
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.45 E-value=0.00012 Score=59.19 Aligned_cols=72 Identities=11% Similarity=0.039 Sum_probs=55.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeecCCCchhHHHHHhccc---CcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v 74 (239)
|||||+..||.+|++++. +.|-+|+.++|+.... ....+.+. ...||+.|.++.++.++-+. ..+..+
T Consensus 9 LITGG~sGIGl~lak~f~-----elgN~VIi~gR~e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 9 LITGGASGIGLALAKRFL-----ELGNTVIICGRNEERLAEAKAENPEIH-TEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred EEeCCcchhhHHHHHHHH-----HhCCEEEEecCcHHHHHHHHhcCcchh-eeeecccchhhHHHHHHHHHhhCCchhee
Confidence 799999999999999999 8899999999986421 11346777 88999999887665554321 126778
Q ss_pred Eccc
Q 048469 75 HDPA 78 (239)
Q Consensus 75 ~~~a 78 (239)
+++|
T Consensus 83 iNNA 86 (245)
T COG3967 83 INNA 86 (245)
T ss_pred eecc
Confidence 8888
No 283
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.45 E-value=7.3e-05 Score=58.84 Aligned_cols=71 Identities=15% Similarity=0.025 Sum_probs=57.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---CCCCC-ceeeEeecCCCchhHHHHHhcccCcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---FPSSA-VDHYITFDATNSGNTTEKLSLLFNEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~-v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~ 76 (239)
|||||.-.||+.++..|. ..|.+|++++|++.... .+.+. ++ ++.+|+.+-+.+.+.+..+.. ++-+++
T Consensus 11 lvTgagaGIG~~~v~~La-----~aGA~ViAvaR~~a~L~sLV~e~p~~I~-Pi~~Dls~wea~~~~l~~v~p-idgLVN 83 (245)
T KOG1207|consen 11 LVTGAGAGIGKEIVLSLA-----KAGAQVIAVARNEANLLSLVKETPSLII-PIVGDLSAWEALFKLLVPVFP-IDGLVN 83 (245)
T ss_pred EeecccccccHHHHHHHH-----hcCCEEEEEecCHHHHHHHHhhCCccee-eeEecccHHHHHHHhhcccCc-hhhhhc
Confidence 589999999999999999 89999999999875321 12343 77 999999998888888877754 667777
Q ss_pred cc
Q 048469 77 PA 78 (239)
Q Consensus 77 ~a 78 (239)
+|
T Consensus 84 NA 85 (245)
T KOG1207|consen 84 NA 85 (245)
T ss_pred cc
Confidence 76
No 284
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=97.45 E-value=0.00011 Score=60.18 Aligned_cols=60 Identities=13% Similarity=-0.060 Sum_probs=45.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CCCCCceeeEeecCCCchhHHHHHhc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FPSSAVDHYITFDATNSGNTTEKLSL 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~~Dl~d~~~~~~~l~~ 66 (239)
||.|+.||+|+++++... ..+++|-.++|+..+.. .....+. |+++|....+-++..+.+
T Consensus 56 lvlggnpfsgs~vlk~A~-----~vv~svgilsen~~k~~l~sw~~~vs-wh~gnsfssn~~k~~l~g 117 (283)
T KOG4288|consen 56 LVLGGNPFSGSEVLKNAT-----NVVHSVGILSENENKQTLSSWPTYVS-WHRGNSFSSNPNKLKLSG 117 (283)
T ss_pred hhhcCCCcchHHHHHHHH-----hhceeeeEeecccCcchhhCCCcccc-hhhccccccCcchhhhcC
Confidence 578999999999999999 89999999999854321 1235677 888887765555555554
No 285
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.45 E-value=0.0002 Score=63.92 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=29.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+||||.+|+-+++.|+ ++|+.|+++.|+..
T Consensus 83 lVvGatG~vG~~iv~~ll-----krgf~vra~VRd~~ 114 (411)
T KOG1203|consen 83 LVVGATGKVGRRIVKILL-----KRGFSVRALVRDEQ 114 (411)
T ss_pred EEecCCCchhHHHHHHHH-----HCCCeeeeeccChh
Confidence 699999999999999999 89999999999854
No 286
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.39 E-value=0.00039 Score=62.43 Aligned_cols=64 Identities=6% Similarity=-0.087 Sum_probs=48.3
Q ss_pred cChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEcccc
Q 048469 6 VSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPAH 79 (239)
Q Consensus 6 tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a~ 79 (239)
||.+|.+++++|. .+|++|+.++++..... ..+ ...+|+++.+++.+++...-..+|.++++|.
T Consensus 213 SG~~G~aiA~~l~-----~~Ga~V~~v~~~~~~~~--~~~---~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa 276 (399)
T PRK05579 213 SGKMGYALARAAA-----RRGADVTLVSGPVNLPT--PAG---VKRIDVESAQEMLDAVLAALPQADIFIMAAA 276 (399)
T ss_pred cchHHHHHHHHHH-----HCCCEEEEeCCCccccC--CCC---cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence 9999999999999 89999999998753211 122 3467999998888887643223788888884
No 287
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.33 E-value=0.00083 Score=55.14 Aligned_cols=72 Identities=22% Similarity=0.211 Sum_probs=54.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC-C-------CCCCCCCceeeEeecCCCchhHHHHHhccc---C
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK-Q-------SWFPSSAVDHYITFDATNSGNTTEKLSLLF---N 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~-~-------~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~ 69 (239)
+|||+.|.||+++.++|+ .+|-.+.++..+.+ + ..++...+. |+++|+++..+++++++.+- +
T Consensus 9 ~vtggagGIGl~~sk~Ll-----~kgik~~~i~~~~En~~a~akL~ai~p~~~v~-F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 9 LVTGGAGGIGLATSKALL-----EKGIKVLVIDDSEENPEAIAKLQAINPSVSVI-FIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred EEecCCchhhHHHHHHHH-----HcCchheeehhhhhCHHHHHHHhccCCCceEE-EEEeccccHHHHHHHHHHHHHHhC
Confidence 589999999999999999 78888776655432 1 112345677 99999999988888877542 2
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.+|.+++.|
T Consensus 83 ~iDIlINgA 91 (261)
T KOG4169|consen 83 TIDILINGA 91 (261)
T ss_pred ceEEEEccc
Confidence 378888777
No 288
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.19 E-value=0.00041 Score=61.71 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=49.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCC----CCCCCCceeeEeecCCCchhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQS----WFPSSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
||+|| |+||+.++..|. +++ .+|++.+|+.... ....++++ .+++|+.|.+++.++|++.
T Consensus 5 lviGa-G~Vg~~va~~la-----~~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~~d~~al~~li~~~ 69 (389)
T COG1748 5 LVIGA-GGVGSVVAHKLA-----QNGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDAADVDALVALIKDF 69 (389)
T ss_pred EEECC-chhHHHHHHHHH-----hCCCceEEEEeCCHHHHHHHHhhccccce-eEEecccChHHHHHHHhcC
Confidence 57777 999999999998 555 8999999986421 11235899 9999999999999999976
No 289
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.11 E-value=0.00075 Score=59.04 Aligned_cols=74 Identities=8% Similarity=0.000 Sum_probs=43.2
Q ss_pred CeecccChhHHHHHHHhhcCCCC--CCCcEEEEEecCCCCCCCCCCCce--e---eEeecCCCchhHHHHHhcccCcceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIAL--GGPWEVYGSAWCPKQSWFPSSAVD--H---YITFDATNSGNTTEKLSLLFNEITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~--~~g~~V~~l~R~~~~~~~~~~~v~--~---~~~~Dl~d~~~~~~~l~~~~~~v~~ 73 (239)
+||||+|+||++++..|+..+.. ..+++|+.++|++..........+ + ....|+....++.++++++ |.
T Consensus 6 ~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~a----Di 81 (325)
T cd01336 6 LVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDV----DV 81 (325)
T ss_pred EEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCC----CE
Confidence 58999999999999999832111 145699999996532111111111 0 0112433345666777754 56
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
|+++|
T Consensus 82 VI~tA 86 (325)
T cd01336 82 AILVG 86 (325)
T ss_pred EEEeC
Confidence 77766
No 290
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.10 E-value=0.00088 Score=57.07 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=54.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----------CCCCCceeeEeecCCCchhHHHHH----hc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----------FPSSAVDHYITFDATNSGNTTEKL----SL 66 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~~~~v~~~~~~Dl~d~~~~~~~l----~~ 66 (239)
|||||+..||++++++|. ..|.+|+..+|+..... ....++. .+.+|+++.+++.+++ +.
T Consensus 12 lVTG~s~GIG~aia~~la-----~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 12 LVTGGSSGIGKAIALLLA-----KAGAKVVITGRSEERLEETAQELGGLGYTGGKVL-AIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred EEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeE-EEECcCCCHHHHHHHHHHHHHH
Confidence 699999999999999999 89999999999865310 0124567 8999999887655544 33
Q ss_pred ccCcceEEEccc
Q 048469 67 LFNEITHVHDPA 78 (239)
Q Consensus 67 ~~~~v~~v~~~a 78 (239)
....+|.+++++
T Consensus 86 ~~GkidiLvnna 97 (270)
T KOG0725|consen 86 FFGKIDILVNNA 97 (270)
T ss_pred hCCCCCEEEEcC
Confidence 233488888877
No 291
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.09 E-value=0.0012 Score=53.10 Aligned_cols=72 Identities=11% Similarity=-0.011 Sum_probs=53.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCC-CCceeeEeecCCCchhHHHHHhccc---Ccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPS-SAVDHYITFDATNSGNTTEKLSLLF---NEI 71 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~-~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v 71 (239)
+||||+..||++++..|. ..|++|.+..++.... .+.. ..-. -..||++++.+++..+++.. ..+
T Consensus 18 ~vtGg~sGIGrAia~~la-----~~Garv~v~dl~~~~A~ata~~L~g~~~h~-aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 18 AVTGGSSGIGRAIAQLLA-----KKGARVAVADLDSAAAEATAGDLGGYGDHS-AFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred EEecCCchHHHHHHHHHH-----hcCcEEEEeecchhhHHHHHhhcCCCCccc-eeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 489999999999999999 8999999988875421 1111 2223 68899999988877666432 237
Q ss_pred eEEEccc
Q 048469 72 THVHDPA 78 (239)
Q Consensus 72 ~~v~~~a 78 (239)
+.+++||
T Consensus 92 svlVncA 98 (256)
T KOG1200|consen 92 SVLVNCA 98 (256)
T ss_pred cEEEEcC
Confidence 7888887
No 292
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.04 E-value=0.00099 Score=59.49 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=48.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
+|.|| |++|+.+++.|.+ ...+ +|++.+|+.... .....+++ ++++|+.|.+++.+.+++. +.|
T Consensus 2 lvlG~-G~vG~~~~~~L~~----~~~~~~v~va~r~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~----dvV 71 (386)
T PF03435_consen 2 LVLGA-GRVGSAIARLLAR----RGPFEEVTVADRNPEKAERLAEKLLGDRVE-AVQVDVNDPESLAELLRGC----DVV 71 (386)
T ss_dssp EEE---SHHHHHHHHHHHC----TTCE-EEEEEESSHHHHHHHHT--TTTTEE-EEE--TTTHHHHHHHHTTS----SEE
T ss_pred EEEcC-cHHHHHHHHHHhc----CCCCCcEEEEECCHHHHHHHHhhcccccee-EEEEecCCHHHHHHHHhcC----CEE
Confidence 58999 9999999999992 3346 899999986531 11346889 9999999999999999876 355
Q ss_pred Eccc
Q 048469 75 HDPA 78 (239)
Q Consensus 75 ~~~a 78 (239)
++++
T Consensus 72 in~~ 75 (386)
T PF03435_consen 72 INCA 75 (386)
T ss_dssp EE-S
T ss_pred EECC
Confidence 5554
No 293
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=96.97 E-value=0.0019 Score=53.02 Aligned_cols=73 Identities=16% Similarity=0.127 Sum_probs=53.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC-CCCC------C-CCCCCceeeEeecCCCchhHHHHHhcccC---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC-PKQS------W-FPSSAVDHYITFDATNSGNTTEKLSLLFN--- 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~-~~~~------~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~--- 69 (239)
+||||+-.||-.||++|+. ..|-+++.-.|+ +... + ..+++++ .++.|+++.+++.+...++..
T Consensus 7 ~ItGaNRGIGlgLVk~llk----~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvH-ii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 7 FITGANRGIGLGLVKELLK----DKGIEVIIATARDPEKAATELALKSKSDSRVH-IIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred EEeccCcchhHHHHHHHhc----CCCcEEEEEecCChHHhhHHHHHhhccCCceE-EEEEecccHHHHHHHHHHHHhhcc
Confidence 5999999999999999993 567775555444 5431 1 1378999 999999998888877765432
Q ss_pred --cceEEEccc
Q 048469 70 --EITHVHDPA 78 (239)
Q Consensus 70 --~v~~v~~~a 78 (239)
.++.+++++
T Consensus 82 ~~GlnlLinNa 92 (249)
T KOG1611|consen 82 SDGLNLLINNA 92 (249)
T ss_pred cCCceEEEecc
Confidence 256677776
No 294
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.95 E-value=0.00099 Score=53.71 Aligned_cols=71 Identities=7% Similarity=-0.041 Sum_probs=51.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-----C-CCCCceeeEeecCCCchhHHHHHhcccCcceEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-----F-PSSAVDHYITFDATNSGNTTEKLSLLFNEITHV 74 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v 74 (239)
+|+||||.+|+.+++.|. ..|++|+.++|+..... . ...+++ ...+|..+.+++.+++.+. +.|
T Consensus 32 lVlGgtG~iG~~~a~~l~-----~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~----diV 101 (194)
T cd01078 32 VVLGGTGPVGQRAAVLLA-----REGARVVLVGRDLERAQKAADSLRARFGEG-VGAVETSDDAARAAAIKGA----DVV 101 (194)
T ss_pred EEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeCCCHHHHHHHHhcC----CEE
Confidence 589999999999999999 78899999999753210 0 012345 5667888888888888764 446
Q ss_pred Ecccccc
Q 048469 75 HDPAHSA 81 (239)
Q Consensus 75 ~~~a~yg 81 (239)
+.++..|
T Consensus 102 i~at~~g 108 (194)
T cd01078 102 FAAGAAG 108 (194)
T ss_pred EECCCCC
Confidence 6555443
No 295
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.88 E-value=0.0009 Score=57.34 Aligned_cols=72 Identities=18% Similarity=0.133 Sum_probs=58.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------C-C--CCCCceeeEeecCCCchhHHHHHhccc---
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------W-F--PSSAVDHYITFDATNSGNTTEKLSLLF--- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~--- 68 (239)
+|||+|..+|.+++.++. .+|..|+.++|+.... . + ....|. +..+|+.|.+++...+++++
T Consensus 37 ~itggS~glgl~la~e~~-----~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~-~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 37 LITGGSSGLGLALALECK-----REGADVTITARSGKKLLEAKAELELLTQVEDVS-YKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred EEecCcchhhHHHHHHHH-----HccCceEEEeccHHHHHHHHhhhhhhhccceee-EeccccccHHHHHHHHhhhhhcc
Confidence 589999999999999999 8999999999975321 1 0 123377 89999999999998888773
Q ss_pred CcceEEEccc
Q 048469 69 NEITHVHDPA 78 (239)
Q Consensus 69 ~~v~~v~~~a 78 (239)
..+|++|+||
T Consensus 111 ~~~d~l~~cA 120 (331)
T KOG1210|consen 111 GPIDNLFCCA 120 (331)
T ss_pred CCcceEEEec
Confidence 2389999998
No 296
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.77 E-value=0.0023 Score=69.09 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=55.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC-CcEEEEEecCCCC----CCC----------------------------------
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG-PWEVYGSAWCPKQ----SWF---------------------------------- 41 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~----~~~---------------------------------- 41 (239)
|||||++.||.+++++|. ++ |++|+.++|++.. .|.
T Consensus 2001 LVTGGarGIG~aiA~~LA-----~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 2001 LVTGGAKGVTFECALELA-----KQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred EEeCCCCHHHHHHHHHHH-----HhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 699999999999999999 55 6899999998310 000
Q ss_pred ----------------CCCCceeeEeecCCCchhHHHHHhccc--CcceEEEccc
Q 048469 42 ----------------PSSAVDHYITFDATNSGNTTEKLSLLF--NEITHVHDPA 78 (239)
Q Consensus 42 ----------------~~~~v~~~~~~Dl~d~~~~~~~l~~~~--~~v~~v~~~a 78 (239)
...++. ++.+|++|.+++++++..+. ..+|.|+|+|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~-y~~~DVtD~~av~~av~~v~~~g~IDgVVhnA 2129 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAE-YASADVTNSVSVAATVQPLNKTLQITGIIHGA 2129 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 012467 89999999999988887653 1288999988
No 297
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.75 E-value=0.0032 Score=54.55 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=25.8
Q ss_pred Ceecc--cChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGI--VSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGa--tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
||||| |..||+++++.|. +.|.+|++ +|+
T Consensus 13 lITGa~~s~GIG~a~A~~la-----~~Ga~Vv~-~~~ 43 (303)
T PLN02730 13 FIAGVADDNGYGWAIAKALA-----AAGAEILV-GTW 43 (303)
T ss_pred EEeCCCCCCcHHHHHHHHHH-----HCCCEEEE-EeC
Confidence 69999 8999999999999 89999888 543
No 298
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=96.65 E-value=0.00078 Score=55.88 Aligned_cols=71 Identities=14% Similarity=0.040 Sum_probs=53.2
Q ss_pred ccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----C-CCCCCceeeEeecCCCchhHHHHHhcc---c-Ccc
Q 048469 4 GIV--SMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----W-FPSSAVDHYITFDATNSGNTTEKLSLL---F-NEI 71 (239)
Q Consensus 4 Gat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~---~-~~v 71 (239)
|++ +.||++++++|+ +.|++|+..+|+.... . ....+.+ .+.+|++|++++.+.+..+ . ..+
T Consensus 1 g~~~s~GiG~aia~~l~-----~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALA-----EEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp STSSTSHHHHHHHHHHH-----HTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCChHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 666 999999999999 8999999999986531 0 0112356 7999999999887776542 1 238
Q ss_pred eEEEccccc
Q 048469 72 THVHDPAHS 80 (239)
Q Consensus 72 ~~v~~~a~y 80 (239)
|++++++.+
T Consensus 75 D~lV~~a~~ 83 (241)
T PF13561_consen 75 DILVNNAGI 83 (241)
T ss_dssp SEEEEEEES
T ss_pred EEEEecccc
Confidence 899988744
No 299
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.53 E-value=0.0037 Score=51.85 Aligned_cols=64 Identities=9% Similarity=-0.095 Sum_probs=44.8
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhc----ccCcceEEEccccc
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSL----LFNEITHVHDPAHS 80 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~----~~~~v~~v~~~a~y 80 (239)
+||.||++++++|. ..|++|+.++|..... + .. ...+|+.+.+++.+.+.. ... +|.++++|.+
T Consensus 23 SSGgIG~AIA~~la-----~~Ga~Vvlv~~~~~l~----~-~~-~~~~Dv~d~~s~~~l~~~v~~~~g~-iDiLVnnAgv 90 (227)
T TIGR02114 23 STGHLGKIITETFL-----SAGHEVTLVTTKRALK----P-EP-HPNLSIREIETTKDLLITLKELVQE-HDILIHSMAV 90 (227)
T ss_pred cccHHHHHHHHHHH-----HCCCEEEEEcChhhcc----c-cc-CCcceeecHHHHHHHHHHHHHHcCC-CCEEEECCEe
Confidence 58999999999999 8999999988642111 1 11 235788887776655443 223 7899998844
No 300
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.42 E-value=0.008 Score=53.53 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=52.4
Q ss_pred CeecccChhHHH--HHHHhhcCCCCCCCcEEEEEecCCC--CC------C---------CC--CCCceeeEeecCCCchh
Q 048469 1 MVIGIVSMADLS--FTEALKSPIALGGPWEVYGSAWCPK--QS------W---------FP--SSAVDHYITFDATNSGN 59 (239)
Q Consensus 1 LVtGatG~iG~~--lv~~L~~~~~~~~g~~V~~l~R~~~--~~------~---------~~--~~~v~~~~~~Dl~d~~~ 59 (239)
||||||+.+|.+ +++.|. .|.+|+++++... .. | .. ...+. .+.+|++++++
T Consensus 45 LVTGaSsGIGlA~~IA~al~------~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~-~i~~DVss~E~ 117 (398)
T PRK13656 45 LVIGASSGYGLASRIAAAFG------AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAK-SINGDAFSDEI 117 (398)
T ss_pred EEECCCchHhHHHHHHHHHH------cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceE-EEEcCCCCHHH
Confidence 699999999999 788774 6888888885321 10 0 01 12345 78999999988
Q ss_pred HHHHHhccc---CcceEEEcccccc
Q 048469 60 TTEKLSLLF---NEITHVHDPAHSA 81 (239)
Q Consensus 60 ~~~~l~~~~---~~v~~v~~~a~yg 81 (239)
+.+.++.+. +.+|.++|++.++
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 877766542 2489999988665
No 301
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.37 E-value=0.0084 Score=53.73 Aligned_cols=63 Identities=11% Similarity=-0.031 Sum_probs=44.9
Q ss_pred cChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhH-HHHHhcccCcceEEEccc
Q 048469 6 VSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNT-TEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 6 tG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~-~~~l~~~~~~v~~v~~~a 78 (239)
||.+|.+++++|. .+|++|+.+.++..... ... ....|+.+.+++ .+.++.....+|.++++|
T Consensus 210 SG~~g~~~a~~~~-----~~Ga~V~~~~g~~~~~~--~~~---~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~A 273 (390)
T TIGR00521 210 SGKMGLALAEAAY-----KRGADVTLITGPVSLLT--PPG---VKSIKVSTAEEMLEAALNELAKDFDIFISAA 273 (390)
T ss_pred cchHHHHHHHHHH-----HCCCEEEEeCCCCccCC--CCC---cEEEEeccHHHHHHHHHHhhcccCCEEEEcc
Confidence 5789999999999 89999999987653221 123 346899998888 555533322268888887
No 302
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=96.23 E-value=0.0039 Score=40.79 Aligned_cols=31 Identities=16% Similarity=0.059 Sum_probs=20.4
Q ss_pred cccccChhHHH-HcCCCCccchHHHHHHHHHH
Q 048469 207 FQHVCSMNKSR-EFGFFKFADTLKSLGMWVTK 237 (239)
Q Consensus 207 ~~~~~d~~kar-~lG~~~~~~~~~~~~~~~~~ 237 (239)
...+.|++||+ .|||++.++.++++.+.+..
T Consensus 23 ~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W 54 (62)
T PF13950_consen 23 AHLVADISKAREELGWKPKYSLEDMIRDAWNW 54 (62)
T ss_dssp SEE-B--HHHHHHC----SSSHHHHHHHHHHH
T ss_pred hhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHH
Confidence 35789999997 59999999999999998765
No 303
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.23 E-value=0.0044 Score=51.46 Aligned_cols=56 Identities=14% Similarity=0.061 Sum_probs=44.2
Q ss_pred HHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 13 FTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 13 lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
++++|+ ++|++|++++|+.... ...+ ++.+|++|.++++++++.+...+|+++|+|
T Consensus 1 ~a~~l~-----~~G~~Vv~~~r~~~~~----~~~~-~~~~Dl~~~~~v~~~~~~~~~~iD~li~nA 56 (241)
T PRK12428 1 TARLLR-----FLGARVIGVDRREPGM----TLDG-FIQADLGDPASIDAAVAALPGRIDALFNIA 56 (241)
T ss_pred ChHHHH-----hCCCEEEEEeCCcchh----hhhH-hhcccCCCHHHHHHHHHHhcCCCeEEEECC
Confidence 467888 8899999999986532 2245 889999999999998886543389999988
No 304
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=95.92 E-value=0.011 Score=48.90 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=44.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEec-CCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAW-CPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R-~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~ 77 (239)
||||+-|.+|..+++-|.. .-|-+ |+.-.- +|+.... +.+ - ++-.|+.|...+++.+-+.. ++-++|-
T Consensus 48 LITG~LGQLG~~~A~LLR~----~yGs~~VILSDI~KPp~~V~-~~G-P-yIy~DILD~K~L~eIVVn~R--IdWL~Hf 117 (366)
T KOG2774|consen 48 LITGSLGQLGRGLASLLRY----MYGSECVILSDIVKPPANVT-DVG-P-YIYLDILDQKSLEEIVVNKR--IDWLVHF 117 (366)
T ss_pred EEecchHHHhHHHHHHHHH----HhCCccEehhhccCCchhhc-ccC-C-chhhhhhccccHHHhhcccc--cceeeeH
Confidence 6999999999999997762 33444 554333 3332211 122 3 78899999988888875543 6766653
No 305
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.85 E-value=0.011 Score=51.06 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=26.2
Q ss_pred Ceeccc--ChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIV--SMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGat--G~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
|||||+ ..||+++++.|. ++|++|+...|.
T Consensus 12 lITGa~~~~GIG~a~A~~la-----~~Ga~Vvv~~~~ 43 (299)
T PRK06300 12 FIAGIGDDQGYGWGIAKALA-----EAGATILVGTWV 43 (299)
T ss_pred EEeCCCCCCCHHHHHHHHHH-----HCCCEEEEEecc
Confidence 699995 899999999999 899999886643
No 306
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=95.82 E-value=0.014 Score=50.23 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=55.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhcccC-----c
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLFN-----E 70 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~-----~ 70 (239)
||||+-...|+.|+++|. +.|+.|.+-.-.++.. ....++.. .++.|++++++++++.+-+.. .
T Consensus 33 lITGCDSGfG~~LA~~L~-----~~Gf~V~Agcl~~~gae~L~~~~~s~rl~-t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 33 LITGCDSGFGRLLAKKLD-----KKGFRVFAGCLTEEGAESLRGETKSPRLR-TLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred EEecCCcHHHHHHHHHHH-----hcCCEEEEEeecCchHHHHhhhhcCCcce-eEeeccCCHHHHHHHHHHHHHhccccc
Confidence 699999999999999999 8999999887554321 11267888 899999999999988774321 2
Q ss_pred ceEEEccc
Q 048469 71 ITHVHDPA 78 (239)
Q Consensus 71 v~~v~~~a 78 (239)
.-.|+++|
T Consensus 107 LwglVNNA 114 (322)
T KOG1610|consen 107 LWGLVNNA 114 (322)
T ss_pred ceeEEecc
Confidence 45567777
No 307
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.61 E-value=0.023 Score=48.88 Aligned_cols=70 Identities=7% Similarity=-0.035 Sum_probs=49.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEecCCC---CC-C----C--CCCCceeeEeecCCCchhHHHHHhcccC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAWCPK---QS-W----F--PSSAVDHYITFDATNSGNTTEKLSLLFN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R~~~---~~-~----~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~ 69 (239)
+|+|| |.+|++++..|. ..|++ |+.++|+.. .. . + ....+. ...+|+.+.+++.+.+..
T Consensus 130 lI~GA-GGagrAia~~La-----~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~-~~~~d~~~~~~~~~~~~~--- 199 (289)
T PRK12548 130 TVIGA-GGAATAIQVQCA-----LDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECI-VNVYDLNDTEKLKAEIAS--- 199 (289)
T ss_pred EEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCce-eEEechhhhhHHHhhhcc---
Confidence 58998 899999999999 78886 999999851 11 0 0 112344 566888887777766653
Q ss_pred cceEEEcccccc
Q 048469 70 EITHVHDPAHSA 81 (239)
Q Consensus 70 ~v~~v~~~a~yg 81 (239)
+|.+++++..|
T Consensus 200 -~DilINaTp~G 210 (289)
T PRK12548 200 -SDILVNATLVG 210 (289)
T ss_pred -CCEEEEeCCCC
Confidence 46788877655
No 308
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.55 E-value=0.029 Score=44.34 Aligned_cols=72 Identities=15% Similarity=-0.003 Sum_probs=56.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC----CCCCCceeeEeecCCCchhHHHHHhcccC---cceE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW----FPSSAVDHYITFDATNSGNTTEKLSLLFN---EITH 73 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~---~v~~ 73 (239)
||||+...+|.+-+++|. .+|..|..++-...... ....++. |...|++...+++.++..+.+ .+|.
T Consensus 13 lvtggasglg~ataerla-----kqgasv~lldlp~skg~~vakelg~~~v-f~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 13 LVTGGASGLGKATAERLA-----KQGASVALLDLPQSKGADVAKELGGKVV-FTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred EeecCcccccHHHHHHHH-----hcCceEEEEeCCcccchHHHHHhCCceE-EeccccCcHHHHHHHHHHHHhhccceee
Confidence 699999999999999999 89999998876443211 0134566 999999999999988876542 3778
Q ss_pred EEccc
Q 048469 74 VHDPA 78 (239)
Q Consensus 74 v~~~a 78 (239)
.++|+
T Consensus 87 ~vnca 91 (260)
T KOG1199|consen 87 LVNCA 91 (260)
T ss_pred eeecc
Confidence 88887
No 309
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=95.51 E-value=0.0096 Score=49.83 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=50.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC---------CC--CCCceeeEeecCCCchhHHHHHhccc-
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW---------FP--SSAVDHYITFDATNSGNTTEKLSLLF- 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~--~~~v~~~~~~Dl~d~~~~~~~l~~~~- 68 (239)
||||++..+|-+||.+|++-+-.+.-..+...+|+-+... -. ..+++ ++..|++|-.++.+|-.++.
T Consensus 7 lITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~-yvlvD~sNm~Sv~~A~~di~~ 85 (341)
T KOG1478|consen 7 LITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVT-YVLVDVSNMQSVFRASKDIKQ 85 (341)
T ss_pred EEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEE-EEEEehhhHHHHHHHHHHHHH
Confidence 6999999999999999994110001123555567643210 01 24678 99999999888877766543
Q ss_pred --CcceEEEccc
Q 048469 69 --NEITHVHDPA 78 (239)
Q Consensus 69 --~~v~~v~~~a 78 (239)
..+|.++.+|
T Consensus 86 rf~~ld~iylNA 97 (341)
T KOG1478|consen 86 RFQRLDYIYLNA 97 (341)
T ss_pred HhhhccEEEEcc
Confidence 1267888777
No 310
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.33 E-value=0.03 Score=49.17 Aligned_cols=63 Identities=13% Similarity=0.043 Sum_probs=39.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc---EEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW---EVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~---~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~ 76 (239)
+|.||||++|+.|++.|. +++| ++.+++|+..... ....+.+ ....|+.+. .++ + +|.||+
T Consensus 5 ~IvGAtG~vG~~l~~lL~-----~~~hp~~~l~~l~s~~~~g~~l~~~g~~-i~v~d~~~~-----~~~---~-vDvVf~ 69 (334)
T PRK14874 5 AVVGATGAVGREMLNILE-----ERNFPVDKLRLLASARSAGKELSFKGKE-LKVEDLTTF-----DFS---G-VDIALF 69 (334)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCCcceEEEEEccccCCCeeeeCCce-eEEeeCCHH-----HHc---C-CCEEEE
Confidence 489999999999999998 6655 5688877643221 1112233 344455321 233 2 677887
Q ss_pred cc
Q 048469 77 PA 78 (239)
Q Consensus 77 ~a 78 (239)
++
T Consensus 70 A~ 71 (334)
T PRK14874 70 SA 71 (334)
T ss_pred CC
Confidence 76
No 311
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.32 E-value=0.018 Score=51.42 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=26.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
.|.||||++|..|++.|.. +..++|+.++++..
T Consensus 42 aIvGATG~vG~eLlrlL~~----hP~~el~~l~s~~s 74 (381)
T PLN02968 42 FVLGASGYTGAEVRRLLAN----HPDFEITVMTADRK 74 (381)
T ss_pred EEECCCChHHHHHHHHHHh----CCCCeEEEEEChhh
Confidence 4899999999999999882 33679999987643
No 312
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=95.17 E-value=0.87 Score=37.81 Aligned_cols=35 Identities=6% Similarity=-0.100 Sum_probs=24.0
Q ss_pred ecccChhHHHHHH-----HhhcCCCCCCCcEEEEEecCCCC
Q 048469 3 IGIVSMADLSFTE-----ALKSPIALGGPWEVYGSAWCPKQ 38 (239)
Q Consensus 3 tGatG~iG~~lv~-----~L~~~~~~~~g~~V~~l~R~~~~ 38 (239)
-+.+|+|+..|.. ++-+ .-+...|+|+.++|.+.+
T Consensus 18 ~~~~g~i~~nl~~~~~~~H~t~-~~~a~~h~vtv~sR~pg~ 57 (315)
T KOG3019|consen 18 NWSNGIIRENLGSETSCCHDTN-VHSADNHAVTVLSRSPGK 57 (315)
T ss_pred CccccchhccccCcccccccCC-CCcccccceEEEecCCCC
Confidence 4678999988876 4431 111345999999999754
No 313
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.10 E-value=0.017 Score=50.73 Aligned_cols=64 Identities=14% Similarity=-0.078 Sum_probs=39.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+||||+|+||+.++++|.. ..| .+|+.++|+..... .-..+ +..+|+. ++.+++.+ +|.|++++
T Consensus 159 LVtGAtG~IGs~lar~L~~----~~gv~~lilv~R~~~rl~--~La~e-l~~~~i~---~l~~~l~~----aDiVv~~t 223 (340)
T PRK14982 159 AVVGATGDIGSAVCRWLDA----KTGVAELLLVARQQERLQ--ELQAE-LGGGKIL---SLEEALPE----ADIVVWVA 223 (340)
T ss_pred EEEccChHHHHHHHHHHHh----hCCCCEEEEEcCCHHHHH--HHHHH-hccccHH---hHHHHHcc----CCEEEECC
Confidence 6999999999999999971 234 58999998743221 01112 2233433 35566664 45666665
No 314
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.08 E-value=0.03 Score=41.52 Aligned_cols=32 Identities=9% Similarity=0.137 Sum_probs=24.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~~ 36 (239)
.|+||||++|+.|++.|.. ...+++..+ +|+.
T Consensus 3 ~IvGAtG~vG~~l~~lL~~----hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 3 AIVGATGYVGRELLRLLAE----HPDFELVALVSSSR 35 (121)
T ss_dssp EEESTTSHHHHHHHHHHHH----TSTEEEEEEEESTT
T ss_pred EEECCCCHHHHHHHHHHhc----CCCccEEEeeeecc
Confidence 4899999999999999983 456785554 5544
No 315
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=94.48 E-value=0.061 Score=47.14 Aligned_cols=72 Identities=11% Similarity=-0.020 Sum_probs=49.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---------CC-C-CCCceeeEeecCCCchhHHHHHhcccC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---------WF-P-SSAVDHYITFDATNSGNTTEKLSLLFN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~-~~~v~~~~~~Dl~d~~~~~~~l~~~~~ 69 (239)
.|.|||||.|..+++++++.- .-.+..+-...|+.... .. . -+..- .+.+|..|++++.+..+.+.
T Consensus 9 VIyGASGfTG~yivee~v~~~-~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~~- 85 (423)
T KOG2733|consen 9 VIYGASGFTGKYIVEEAVSSQ-VFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQAR- 85 (423)
T ss_pred EEEccccccceeeHHHHhhhh-cccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhhE-
Confidence 489999999999999999200 02567777778875421 00 0 12233 67899999999999988753
Q ss_pred cceEEEccc
Q 048469 70 EITHVHDPA 78 (239)
Q Consensus 70 ~v~~v~~~a 78 (239)
.|++|+
T Consensus 86 ---vivN~v 91 (423)
T KOG2733|consen 86 ---VIVNCV 91 (423)
T ss_pred ---EEEecc
Confidence 455555
No 316
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=94.45 E-value=0.054 Score=47.69 Aligned_cols=63 Identities=11% Similarity=0.027 Sum_probs=37.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEE---EEEecCCCCC-CCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEV---YGSAWCPKQS-WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHD 76 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V---~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~ 76 (239)
+|.||||++|+.|++.|. +++|.+ ..+++..... .....+.+ .+..|+. . ..+. + +|.+|+
T Consensus 3 aIvGAtG~vG~eLi~lL~-----~~~hp~~~l~~~as~~~~g~~~~~~~~~-~~~~~~~-~----~~~~---~-~D~v~~ 67 (339)
T TIGR01296 3 AIVGATGAVGQEMLKILE-----ERNFPIDKLVLLASDRSAGRKVTFKGKE-LEVNEAK-I----ESFE---G-IDIALF 67 (339)
T ss_pred EEEcCCCHHHHHHHHHHH-----hCCCChhhEEEEeccccCCCeeeeCCee-EEEEeCC-h----HHhc---C-CCEEEE
Confidence 489999999999999988 667753 3444653321 11112334 4555653 1 2233 2 677777
Q ss_pred cc
Q 048469 77 PA 78 (239)
Q Consensus 77 ~a 78 (239)
++
T Consensus 68 a~ 69 (339)
T TIGR01296 68 SA 69 (339)
T ss_pred CC
Confidence 76
No 317
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.93 E-value=0.035 Score=50.50 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=45.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-C-CCCCceeeEeecCCCchhHHHH-Hhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-F-PSSAVDHYITFDATNSGNTTEK-LSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~-~~~~v~~~~~~Dl~d~~~~~~~-l~~~ 67 (239)
+|+|+ |.+|+++++.|. ..|++|++++|++.... . ...+++ .+.+|.++++.+.++ +.++
T Consensus 4 iIiG~-G~ig~~~a~~L~-----~~g~~v~vid~~~~~~~~~~~~~~~~-~~~gd~~~~~~l~~~~~~~a 66 (453)
T PRK09496 4 IIVGA-GQVGYTLAENLS-----GENNDVTVIDTDEERLRRLQDRLDVR-TVVGNGSSPDVLREAGAEDA 66 (453)
T ss_pred EEECC-CHHHHHHHHHHH-----hCCCcEEEEECCHHHHHHHHhhcCEE-EEEeCCCCHHHHHHcCCCcC
Confidence 47786 999999999999 88999999999764311 1 124677 889999988877766 5443
No 318
>PLN00106 malate dehydrogenase
Probab=93.54 E-value=0.15 Score=44.64 Aligned_cols=68 Identities=13% Similarity=-0.022 Sum_probs=42.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCCCC---CCCCCCceeeEeecCCCchhHHHHHhcccCcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPKQS---WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~---~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~ 75 (239)
+||||+|.||++++..|. .++ .++..+++++... .+.+.... ....++.+.+++.++++++ |.|+
T Consensus 22 ~IiGaaG~VG~~~a~~l~-----~~~~~~el~L~Di~~~~g~a~Dl~~~~~~-~~i~~~~~~~d~~~~l~~a----DiVV 91 (323)
T PLN00106 22 AVLGAAGGIGQPLSLLMK-----MNPLVSELHLYDIANTPGVAADVSHINTP-AQVRGFLGDDQLGDALKGA----DLVI 91 (323)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCCCEEEEEecCCCCeeEchhhhCCcC-ceEEEEeCCCCHHHHcCCC----CEEE
Confidence 489999999999999887 444 4799998876221 11111112 2333544555677788765 4555
Q ss_pred ccc
Q 048469 76 DPA 78 (239)
Q Consensus 76 ~~a 78 (239)
+++
T Consensus 92 itA 94 (323)
T PLN00106 92 IPA 94 (323)
T ss_pred EeC
Confidence 555
No 319
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=93.51 E-value=0.18 Score=44.21 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=34.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCC--CCcEEEEEecCCCCCCCCCCCceeeEeecCCCch
Q 048469 1 MVIGIVSMADLSFTEALKSPIALG--GPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSG 58 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~ 58 (239)
.|+||+|.||++++..|....... +.++++.+++++... ..+ -...|+.|..
T Consensus 3 ~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~-g~~~Dl~d~~ 56 (324)
T TIGR01758 3 VVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLE-GVVMELMDCA 56 (324)
T ss_pred EEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccc-eeEeehhccc
Confidence 489999999999999988211111 334688998865431 133 4566777654
No 320
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.50 E-value=0.021 Score=41.63 Aligned_cols=56 Identities=23% Similarity=0.220 Sum_probs=41.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeecCCCchhHHHH
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WFPSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
+|.|. |-+|+.+++.|. +.+++|+++.+++... .....++. ++.+|.+|++.++++
T Consensus 2 vI~G~-g~~~~~i~~~L~-----~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 2 VIIGY-GRIGREIAEQLK-----EGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERA 58 (116)
T ss_dssp EEES--SHHHHHHHHHHH-----HTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHT
T ss_pred EEEcC-CHHHHHHHHHHH-----hCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhc
Confidence 35665 899999999999 7667999999986421 11134578 999999999987765
No 321
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=93.50 E-value=0.082 Score=43.43 Aligned_cols=31 Identities=10% Similarity=-0.045 Sum_probs=28.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+||+|.+|++++..|. +.||+|+..+|++.
T Consensus 5 IIGG~G~mG~ala~~L~-----~~G~~V~v~~r~~~ 35 (219)
T TIGR01915 5 VLGGTGDQGKGLALRLA-----KAGNKIIIGSRDLE 35 (219)
T ss_pred EEcCCCHHHHHHHHHHH-----hCCCEEEEEEcCHH
Confidence 78999999999999999 78999999998763
No 322
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.30 E-value=0.16 Score=44.44 Aligned_cols=68 Identities=10% Similarity=0.080 Sum_probs=41.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCC--CCcEEEEEecCCCCCCCCCCCceeeEeecCCCc-----------hhHHHHHhcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALG--GPWEVYGSAWCPKQSWFPSSAVDHYITFDATNS-----------GNTTEKLSLL 67 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~-----------~~~~~~l~~~ 67 (239)
.||||+|.||+.++..|.+..... ..++++.++++... +..+ -...|+.|. ....+.++++
T Consensus 4 ~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~-g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~a 77 (323)
T cd00704 4 LITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALE-GVVMELQDCAFPLLKGVVITTDPEEAFKDV 77 (323)
T ss_pred EEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----Cccc-eeeeehhhhcccccCCcEEecChHHHhCCC
Confidence 489999999999999888321111 23468888886521 1233 455666654 2344566654
Q ss_pred cCcceEEEccc
Q 048469 68 FNEITHVHDPA 78 (239)
Q Consensus 68 ~~~v~~v~~~a 78 (239)
|.|+++|
T Consensus 78 ----DiVVitA 84 (323)
T cd00704 78 ----DVAILVG 84 (323)
T ss_pred ----CEEEEeC
Confidence 4555554
No 323
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=92.96 E-value=0.16 Score=44.89 Aligned_cols=31 Identities=10% Similarity=-0.020 Sum_probs=24.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~ 35 (239)
.|+||||++|..+++.|.+ ..+++++.+ +++
T Consensus 4 aIiGATG~vG~ellr~L~~----hP~~el~~l~~s~ 35 (346)
T TIGR01850 4 AIVGASGYTGGELLRLLLN----HPEVEITYLVSSR 35 (346)
T ss_pred EEECCCCHHHHHHHHHHHc----CCCceEEEEeccc
Confidence 4899999999999999982 446788854 443
No 324
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=92.78 E-value=0.094 Score=43.40 Aligned_cols=60 Identities=12% Similarity=0.040 Sum_probs=42.5
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCC-C-----CCCceeeEeecCCCchhHHHHHhcc
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWF-P-----SSAVDHYITFDATNSGNTTEKLSLL 67 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~-----~~~v~~~~~~Dl~d~~~~~~~l~~~ 67 (239)
|+|++||.|..++.++. ..||+|.-++|+....+. + +-+++ +...+.-|+....+.++.+
T Consensus 7 vfgg~gflg~~ic~~a~-----~sgy~vvsvsrsgas~~snkid~~~dve~e-~tlvlggnpfsgs~vlk~A 72 (283)
T KOG4288|consen 7 VFGGNGFLGKRICQEAV-----TSGYQVVSVSRSGASPHSNKIDDKQDVEVE-WTLVLGGNPFSGSEVLKNA 72 (283)
T ss_pred eecccccchhhhhHHHH-----hcCceEEEeccccCCCcCCCCcchhhhhHH-HHhhhcCCCcchHHHHHHH
Confidence 78999999999999999 779999999998654331 1 11234 4445555676666666554
No 325
>PRK05086 malate dehydrogenase; Provisional
Probab=92.58 E-value=0.3 Score=42.49 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=26.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+||||.||++++..|... ...+++++.+.|++.
T Consensus 4 ~IIGAsG~VG~aia~~l~~~--~~~~~el~L~d~~~~ 38 (312)
T PRK05086 4 AVLGAAGGIGQALALLLKTQ--LPAGSELSLYDIAPV 38 (312)
T ss_pred EEECCCCHHHHHHHHHHHcC--CCCccEEEEEecCCC
Confidence 58999999999999887510 034578888888743
No 326
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=92.57 E-value=0.3 Score=39.16 Aligned_cols=64 Identities=14% Similarity=0.023 Sum_probs=38.8
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
.||..|.+|++++. .+|++|+.+.....-. .+++++ .+ ++...+++.+++...-...|.++++|
T Consensus 27 SSG~~G~~lA~~~~-----~~Ga~V~li~g~~~~~--~p~~~~-~i--~v~sa~em~~~~~~~~~~~Di~I~aA 90 (185)
T PF04127_consen 27 SSGKMGAALAEEAA-----RRGAEVTLIHGPSSLP--PPPGVK-VI--RVESAEEMLEAVKELLPSADIIIMAA 90 (185)
T ss_dssp --SHHHHHHHHHHH-----HTT-EEEEEE-TTS------TTEE-EE--E-SSHHHHHHHHHHHGGGGSEEEE-S
T ss_pred CcCHHHHHHHHHHH-----HCCCEEEEEecCcccc--ccccce-EE--EecchhhhhhhhccccCcceeEEEec
Confidence 58999999999999 8999999998864211 134666 55 45566666666554322146777777
No 327
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=92.47 E-value=0.14 Score=41.73 Aligned_cols=31 Identities=13% Similarity=-0.137 Sum_probs=27.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
.+||+|.||..|+++|. ..||+|+.-+|+.+
T Consensus 5 ~i~GtGniG~alA~~~a-----~ag~eV~igs~r~~ 35 (211)
T COG2085 5 AIIGTGNIGSALALRLA-----KAGHEVIIGSSRGP 35 (211)
T ss_pred EEeccChHHHHHHHHHH-----hCCCeEEEecCCCh
Confidence 46889999999999999 89999888877654
No 328
>PTZ00325 malate dehydrogenase; Provisional
Probab=92.02 E-value=0.4 Score=41.92 Aligned_cols=70 Identities=11% Similarity=-0.125 Sum_probs=43.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC---CCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEcc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS---WFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDP 77 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~ 77 (239)
+|+||+|.||+.++..|... ...+++..+++..... .+.+.... ....+.+|+.++.++++++ |.|+++
T Consensus 12 ~IiGaaG~VGs~~a~~l~~~---~~~~elvL~Di~~~~g~a~Dl~~~~~~-~~v~~~td~~~~~~~l~ga----DvVVit 83 (321)
T PTZ00325 12 AVLGAAGGIGQPLSLLLKQN---PHVSELSLYDIVGAPGVAADLSHIDTP-AKVTGYADGELWEKALRGA----DLVLIC 83 (321)
T ss_pred EEECCCCHHHHHHHHHHhcC---CCCCEEEEEecCCCcccccchhhcCcC-ceEEEecCCCchHHHhCCC----CEEEEC
Confidence 48999999999999988721 2336899998832221 11111113 3445666766667788865 445554
Q ss_pred c
Q 048469 78 A 78 (239)
Q Consensus 78 a 78 (239)
+
T Consensus 84 a 84 (321)
T PTZ00325 84 A 84 (321)
T ss_pred C
Confidence 4
No 329
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=91.99 E-value=0.12 Score=42.82 Aligned_cols=55 Identities=15% Similarity=-0.043 Sum_probs=42.6
Q ss_pred ecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC--CC-CCCceeeEeecCCCchhHHHH
Q 048469 3 IGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW--FP-SSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 3 tGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~-~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
.-|.|-+|+.+++.|. +.||+|+++.+++.... .. ..... .+.+|-+|++.++++
T Consensus 5 IiG~G~vG~~va~~L~-----~~g~~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~~~~L~~a 62 (225)
T COG0569 5 IIGAGRVGRSVARELS-----EEGHNVVLIDRDEERVEEFLADELDTH-VVIGDATDEDVLEEA 62 (225)
T ss_pred EECCcHHHHHHHHHHH-----hCCCceEEEEcCHHHHHHHhhhhcceE-EEEecCCCHHHHHhc
Confidence 3446999999999999 89999999999865311 11 24456 889999999988777
No 330
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=91.96 E-value=0.45 Score=42.21 Aligned_cols=65 Identities=6% Similarity=-0.061 Sum_probs=46.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~ 75 (239)
+|+| +|..|+.+++.+. +.|++|++++.++...... -.-+ ++..|..|++.+.+.++..+ +|.|+
T Consensus 3 lilG-~g~~~~~l~~aa~-----~~G~~v~~~d~~~~~~~~~-~ad~-~~~~~~~d~~~l~~~~~~~~--id~v~ 67 (380)
T TIGR01142 3 LLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPAMQ-VAHR-SYVINMLDGDALRAVIEREK--PDYIV 67 (380)
T ss_pred EEEC-CCHHHHHHHHHHH-----HcCCEEEEEeCCCCCchhh-hCce-EEEcCCCCHHHHHHHHHHhC--CCEEE
Confidence 5788 5999999999999 8899999999876432111 1113 56678889998888887533 45444
No 331
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=91.53 E-value=0.38 Score=42.49 Aligned_cols=28 Identities=14% Similarity=0.270 Sum_probs=21.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc---EEEEEe
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW---EVYGSA 33 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~---~V~~l~ 33 (239)
.|.||||++|..|++.|. .++| ++..++
T Consensus 11 aVvGAtG~vG~eLlrlL~-----~~~hP~~~l~~la 41 (344)
T PLN02383 11 AIVGVTGAVGQEFLSVLT-----DRDFPYSSLKMLA 41 (344)
T ss_pred EEEcCCChHHHHHHHHHH-----hCCCCcceEEEEE
Confidence 489999999999999888 6566 444443
No 332
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=91.43 E-value=0.2 Score=44.22 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=25.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+||||++|+.|++.|.. ....+++++.++.
T Consensus 7 ~I~GatG~iG~~l~~~L~~----~p~~el~~~~~s~ 38 (349)
T PRK08664 7 GILGATGMVGQRFVQLLAN----HPWFEVTALAASE 38 (349)
T ss_pred EEECCCCHHHHHHHHHHHc----CCCceEEEEEcCh
Confidence 4899999999999999982 3345888885543
No 333
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=91.17 E-value=0.13 Score=44.69 Aligned_cols=68 Identities=12% Similarity=-0.054 Sum_probs=45.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCC--CCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWF--PSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+|-|||||.|.-++++|. ++|.+-...+|++..... ..-+-+ +-..++-+|+.+.+.+++. ..|++|+
T Consensus 10 iiYGAtGy~G~lvae~l~-----~~g~~~aLAgRs~~kl~~l~~~LG~~-~~~~p~~~p~~~~~~~~~~----~VVlncv 79 (382)
T COG3268 10 IIYGATGYAGGLVAEYLA-----REGLTAALAGRSSAKLDALRASLGPE-AAVFPLGVPAALEAMASRT----QVVLNCV 79 (382)
T ss_pred EEEccccchhHHHHHHHH-----HcCCchhhccCCHHHHHHHHHhcCcc-ccccCCCCHHHHHHHHhcc----eEEEecc
Confidence 478999999999999999 788776666777542110 011223 3345555688888888764 4566665
No 334
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=90.93 E-value=0.27 Score=43.37 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=25.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
+|+||||++|+.+++.|.. ..+++++++.++
T Consensus 6 aIiGAtG~vG~~l~~~L~~----~p~~elv~v~~~ 36 (343)
T PRK00436 6 GIVGASGYTGGELLRLLLN----HPEVEIVAVTSR 36 (343)
T ss_pred EEECCCCHHHHHHHHHHHc----CCCceEEEEECc
Confidence 4899999999999999982 447888777664
No 335
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=90.86 E-value=0.13 Score=48.44 Aligned_cols=55 Identities=9% Similarity=-0.019 Sum_probs=42.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeecCCCchhHHHH
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WFPSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
|.| .|-+|++++++|. ++|++|+++.+++... ...+.+.. .+.+|.+|++.++++
T Consensus 422 I~G-~G~~G~~la~~L~-----~~g~~vvvId~d~~~~~~~~~~g~~-~i~GD~~~~~~L~~a 477 (558)
T PRK10669 422 LVG-YGRVGSLLGEKLL-----AAGIPLVVIETSRTRVDELRERGIR-AVLGNAANEEIMQLA 477 (558)
T ss_pred EEC-CChHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHCCCe-EEEcCCCCHHHHHhc
Confidence 445 6999999999999 8899999999876431 11235677 899999998876654
No 336
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=90.69 E-value=0.37 Score=42.60 Aligned_cols=71 Identities=13% Similarity=-0.021 Sum_probs=42.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
||.||+|.+|++.++-+. ..+ ..|++.++.......+.-+.+ ...|..+++-+++..+.....+|+|+-+.
T Consensus 162 Lv~ggsggVG~~aiQlAk-----~~~~~~v~t~~s~e~~~l~k~lGAd--~vvdy~~~~~~e~~kk~~~~~~DvVlD~v 233 (347)
T KOG1198|consen 162 LVLGGSGGVGTAAIQLAK-----HAGAIKVVTACSKEKLELVKKLGAD--EVVDYKDENVVELIKKYTGKGVDVVLDCV 233 (347)
T ss_pred EEEeCCcHHHHHHHHHHH-----hcCCcEEEEEcccchHHHHHHcCCc--EeecCCCHHHHHHHHhhcCCCccEEEECC
Confidence 689999999999998777 677 445554443322211223443 34677776544444442222378887665
No 337
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=90.43 E-value=0.23 Score=45.11 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=42.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-C--CCCCceeeEeecCCCchhHHHH
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-F--PSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~--~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
+|.|+ |.+|+.+++.|. ..|++|+++.+++.... + ...++. .+.+|.++++.+.++
T Consensus 235 iIiG~-G~~g~~l~~~L~-----~~~~~v~vid~~~~~~~~~~~~~~~~~-~i~gd~~~~~~L~~~ 293 (453)
T PRK09496 235 MIVGG-GNIGYYLAKLLE-----KEGYSVKLIERDPERAEELAEELPNTL-VLHGDGTDQELLEEE 293 (453)
T ss_pred EEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHHHHHHHHHHCCCCe-EEECCCCCHHHHHhc
Confidence 46776 999999999998 78999999998864211 0 123577 889999998877554
No 338
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=90.00 E-value=0.71 Score=41.06 Aligned_cols=60 Identities=15% Similarity=-0.066 Sum_probs=44.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
+|.|+ |.+|+-++.++. +.|++|++++..+..... .-.-. ++.+|..|.+.+.+.++.++
T Consensus 6 gilG~-Gql~~ml~~aa~-----~lG~~v~~~d~~~~~pa~-~~ad~-~~~~~~~D~~~l~~~a~~~d 65 (372)
T PRK06019 6 GIIGG-GQLGRMLALAAA-----PLGYKVIVLDPDPDSPAA-QVADE-VIVADYDDVAALRELAEQCD 65 (372)
T ss_pred EEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCCCCchh-HhCce-EEecCCCCHHHHHHHHhcCC
Confidence 36776 899999999998 889999999876543210 01113 66789999999988888664
No 339
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=89.88 E-value=0.39 Score=32.54 Aligned_cols=30 Identities=27% Similarity=0.183 Sum_probs=26.1
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| +|++|-.++..|. ..|.+|+.+.|++.
T Consensus 4 ViG-gG~ig~E~A~~l~-----~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 4 VIG-GGFIGIELAEALA-----ELGKEVTLIERSDR 33 (80)
T ss_dssp EES-SSHHHHHHHHHHH-----HTTSEEEEEESSSS
T ss_pred EEC-cCHHHHHHHHHHH-----HhCcEEEEEeccch
Confidence 455 6999999999999 78999999999864
No 340
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.84 E-value=0.26 Score=44.83 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=35.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC------CCCCCCceeeEeecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS------WFPSSAVDHYITFDATN 56 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~~Dl~d 56 (239)
+|+|+++ +|..+++.|+ ..|++|++.+++.... .+...+++ ++.+|..+
T Consensus 9 ~iiG~g~-~G~~~A~~l~-----~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~ 63 (450)
T PRK14106 9 LVVGAGV-SGLALAKFLK-----KLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPE 63 (450)
T ss_pred EEECCCH-HHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcch
Confidence 4899877 9999999999 8999999999875221 01123566 66777654
No 341
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=89.61 E-value=0.84 Score=40.70 Aligned_cols=65 Identities=9% Similarity=-0.053 Sum_probs=45.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~ 75 (239)
||+|+ |..|+.++..+. +.|++|+.++.++...... ..-. ++..|..|++.+.+.++... ++.|+
T Consensus 16 lIiG~-g~~~~~~~~a~~-----~~G~~v~~~~~~~~~~~~~-~ad~-~~~~~~~d~~~l~~~~~~~~--id~vi 80 (395)
T PRK09288 16 MLLGS-GELGKEVAIEAQ-----RLGVEVIAVDRYANAPAMQ-VAHR-SHVIDMLDGDALRAVIEREK--PDYIV 80 (395)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCCCCchHH-hhhh-eEECCCCCHHHHHHHHHHhC--CCEEE
Confidence 57774 789999999998 7899999998876432100 0112 56788889888888887432 44443
No 342
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=89.57 E-value=0.3 Score=43.62 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=28.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
.|.||+|.+|+.+++.|. ..||+|++.+|++
T Consensus 102 ~IiGG~GlmG~slA~~l~-----~~G~~V~~~d~~~ 132 (374)
T PRK11199 102 VIVGGKGQLGRLFAKMLT-----LSGYQVRILEQDD 132 (374)
T ss_pred EEEcCCChhhHHHHHHHH-----HCCCeEEEeCCCc
Confidence 378999999999999999 8899999999864
No 343
>PRK08655 prephenate dehydrogenase; Provisional
Probab=89.15 E-value=0.36 Score=44.00 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=28.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+||+|.+|+.+++.|. ..|++|++.+|++.
T Consensus 4 ~IIGG~G~mG~slA~~L~-----~~G~~V~v~~r~~~ 35 (437)
T PRK08655 4 SIIGGTGGLGKWFARFLK-----EKGFEVIVTGRDPK 35 (437)
T ss_pred EEEecCCHHHHHHHHHHH-----HCCCEEEEEECChH
Confidence 478999999999999999 78999999999754
No 344
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=89.07 E-value=0.44 Score=47.89 Aligned_cols=61 Identities=15% Similarity=0.107 Sum_probs=43.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-------------EEEEecCCCCCC-C--CCCCceeeEeecCCCchhHHHHH
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-------------VYGSAWCPKQSW-F--PSSAVDHYITFDATNSGNTTEKL 64 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-------------V~~l~R~~~~~~-~--~~~~v~~~~~~Dl~d~~~~~~~l 64 (239)
+|+|| |+||+..++.|.+ ..+++ |++.+++..... + ..++++ .+..|+.|.+++.+++
T Consensus 573 lVLGA-G~VG~~~a~~La~----~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~-~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 573 LILGA-GRVCRPAAEYLAS----VKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAE-AVQLDVSDSESLLKYV 646 (1042)
T ss_pred EEECC-CHHHHHHHHHHHh----CcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCc-eEEeecCCHHHHHHhh
Confidence 57886 9999999999983 22333 777776643211 0 124677 8999999999998888
Q ss_pred hcc
Q 048469 65 SLL 67 (239)
Q Consensus 65 ~~~ 67 (239)
+++
T Consensus 647 ~~~ 649 (1042)
T PLN02819 647 SQV 649 (1042)
T ss_pred cCC
Confidence 764
No 345
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=88.42 E-value=0.46 Score=41.82 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=24.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~ 35 (239)
.|+||||++|++|++.|. ..+ .+|.++.++
T Consensus 4 aIvGatG~~G~~L~~~l~-----~~~~~~l~~v~~~ 34 (341)
T TIGR00978 4 AVLGATGLVGQKFVKLLA-----KHPYFELAKVVAS 34 (341)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCceEEEEEEC
Confidence 489999999999999887 444 688888543
No 346
>PRK04148 hypothetical protein; Provisional
Probab=88.26 E-value=0.18 Score=38.22 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=36.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeecCCCch
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WFPSSAVDHYITFDATNSG 58 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~ 58 (239)
+.| +| .|.+++..|. +.|++|++++.++... ......++ .+.+|+.+++
T Consensus 22 eIG-~G-fG~~vA~~L~-----~~G~~ViaIDi~~~aV~~a~~~~~~-~v~dDlf~p~ 71 (134)
T PRK04148 22 ELG-IG-FYFKVAKKLK-----ESGFDVIVIDINEKAVEKAKKLGLN-AFVDDLFNPN 71 (134)
T ss_pred EEE-ec-CCHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhCCe-EEECcCCCCC
Confidence 455 56 7888999998 7899999999886521 11224567 8999999875
No 347
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=88.17 E-value=1.3 Score=39.05 Aligned_cols=60 Identities=8% Similarity=-0.181 Sum_probs=43.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
+|.|+ |.+|+.+++++. +.|++|++++.++..... .-.-+ ++.+|..|++.+.+.++.++
T Consensus 3 giiG~-gql~~~l~~aa~-----~lG~~v~~~d~~~~~p~~-~~ad~-~~~~~~~d~~~i~~~a~~~d 62 (352)
T TIGR01161 3 GILGG-GQLGRMLALAAR-----PLGIKVHVLDPDANSPAV-QVADH-VVLAPFFDPAAIRELAESCD 62 (352)
T ss_pred EEECC-CHHHHHHHHHHH-----HcCCEEEEECCCCCCChh-HhCce-eEeCCCCCHHHHHHHHhhCC
Confidence 36786 899999999999 889999999886542210 01113 56788899998888887653
No 348
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=88.07 E-value=1.3 Score=39.44 Aligned_cols=30 Identities=7% Similarity=0.042 Sum_probs=22.8
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcE---EEEEecC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWE---VYGSAWC 35 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~---V~~l~R~ 35 (239)
|.||||++|+.|++.|++ ++.+. ++.++..
T Consensus 6 IVGATG~vG~ell~llL~----~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 6 FVGWRGMVGSVLMQRMVE----ENDFDLIEPVFFSTS 38 (369)
T ss_pred EEeCCCHHHHHHHHHHHh----CCCCCcCcEEEecch
Confidence 899999999999995552 55665 6666654
No 349
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=88.00 E-value=0.47 Score=41.02 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=26.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|+| +|.+|++++..|. ..||+|++.+|++
T Consensus 7 VIG-~G~mG~~iA~~la-----~~G~~V~v~d~~~ 35 (308)
T PRK06129 7 IIG-AGLIGRAWAIVFA-----RAGHEVRLWDADP 35 (308)
T ss_pred EEC-ccHHHHHHHHHHH-----HCCCeeEEEeCCH
Confidence 678 7999999999999 8899999999975
No 350
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=87.93 E-value=0.37 Score=42.39 Aligned_cols=29 Identities=14% Similarity=0.131 Sum_probs=22.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc---EEEEEec
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW---EVYGSAW 34 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~---~V~~l~R 34 (239)
+|+||||++|..|++.|. +++| ++..++.
T Consensus 8 aIvGATG~vG~eLlrlL~-----~~~hP~~~l~~v~s 39 (336)
T PRK05671 8 AVVGATGTVGEALVQILE-----ERDFPVGTLHLLAS 39 (336)
T ss_pred EEEccCCHHHHHHHHHHh-----hCCCCceEEEEEEC
Confidence 489999999999999888 5555 4445543
No 351
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=86.54 E-value=0.92 Score=33.74 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=25.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEE-EecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYG-SAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~-l~R~~ 36 (239)
.|.|++|..|+.+++.+.+ ..++++.+ +.|++
T Consensus 4 ~i~G~~GrMG~~i~~~i~~----~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 4 GIVGASGRMGRAIAEAILE----SPGFELVGAVDRKP 36 (124)
T ss_dssp EEETTTSHHHHHHHHHHHH----STTEEEEEEEETTT
T ss_pred EEECCCCHHHHHHHHHHHh----cCCcEEEEEEecCC
Confidence 4889999999999999983 58899555 56654
No 352
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=86.33 E-value=0.58 Score=35.34 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=26.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R~~~ 37 (239)
||.|| |.+|++++..|. ..|.+ |+.++|+..
T Consensus 16 lviGa-Gg~ar~v~~~L~-----~~g~~~i~i~nRt~~ 47 (135)
T PF01488_consen 16 LVIGA-GGAARAVAAALA-----ALGAKEITIVNRTPE 47 (135)
T ss_dssp EEESS-SHHHHHHHHHHH-----HTTSSEEEEEESSHH
T ss_pred EEECC-HHHHHHHHHHHH-----HcCCCEEEEEECCHH
Confidence 57886 889999999999 67876 999999754
No 353
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=86.00 E-value=0.67 Score=39.68 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=28.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+||+|.+|.++++.+. ..|.+|++++|++.
T Consensus 167 lI~ga~g~vG~~~~~~a~-----~~g~~v~~~~~~~~ 198 (332)
T cd08259 167 LVTGAGGGVGIHAIQLAK-----ALGARVIAVTRSPE 198 (332)
T ss_pred EEECCCCHHHHHHHHHHH-----HcCCeEEEEeCCHH
Confidence 689999999999999998 78999999988653
No 354
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=85.21 E-value=0.84 Score=38.92 Aligned_cols=31 Identities=13% Similarity=-0.018 Sum_probs=27.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~ 37 (239)
||+|+ |.+|++++..|. ..| .+|+.++|+..
T Consensus 127 lVlGa-Gg~a~ai~~aL~-----~~g~~~V~v~~R~~~ 158 (278)
T PRK00258 127 LILGA-GGAARAVILPLL-----DLGVAEITIVNRTVE 158 (278)
T ss_pred EEEcC-cHHHHHHHHHHH-----HcCCCEEEEEeCCHH
Confidence 58886 999999999999 778 68999999854
No 355
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=84.75 E-value=0.93 Score=40.57 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|| |++|.+++.+|. +.|++|+++.|++
T Consensus 5 vIIGa-G~~G~~~A~~La-----~~g~~V~vle~~~ 34 (410)
T PRK12409 5 AVIGA-GITGVTTAYALA-----QRGYQVTVFDRHR 34 (410)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCeEEEEeCCC
Confidence 36775 999999999999 7899999999975
No 356
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=84.39 E-value=4.1 Score=34.25 Aligned_cols=68 Identities=13% Similarity=-0.047 Sum_probs=48.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
||+|||+ =|+.|++.|. ..|++|++..-..... .....+. .+.+-+.|.+++.+.+.+.. |+.|+-++
T Consensus 6 lvlgGT~-egr~la~~L~-----~~g~~v~~Svat~~g~-~~~~~~~-v~~G~l~~~~~l~~~l~~~~--i~~VIDAT 73 (248)
T PRK08057 6 LLLGGTS-EARALARALA-----AAGVDIVLSLAGRTGG-PADLPGP-VRVGGFGGAEGLAAYLREEG--IDLVIDAT 73 (248)
T ss_pred EEEechH-HHHHHHHHHH-----hCCCeEEEEEccCCCC-cccCCce-EEECCCCCHHHHHHHHHHCC--CCEEEECC
Confidence 5788886 5999999998 7899877665443222 2234566 67788779999999998654 66666443
No 357
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=84.38 E-value=0.81 Score=36.42 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=25.1
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.|| |.+|+.++..++ ..|++|+.+.+++.
T Consensus 4 ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 4 VIGA-GTMGRGIAALFA-----RAGYEVTLYDRSPE 33 (180)
T ss_dssp EES--SHHHHHHHHHHH-----HTTSEEEEE-SSHH
T ss_pred EEcC-CHHHHHHHHHHH-----hCCCcEEEEECChH
Confidence 7786 999999999999 78999999998754
No 358
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=83.95 E-value=1.1 Score=39.40 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=27.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|| |++|..++.+|. ++|++|+.+.|...
T Consensus 7 ~IIGg-Gi~G~s~A~~L~-----~~g~~V~lie~~~~ 37 (376)
T PRK11259 7 IVIGL-GSMGSAAGYYLA-----RRGLRVLGLDRFMP 37 (376)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCeEEEEecccC
Confidence 46775 999999999999 78999999999754
No 359
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=83.86 E-value=1.5 Score=38.23 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=23.9
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|.||||++|..|++.|.+ +...++..++.+.
T Consensus 7 IvGAtGy~G~eLlrlL~~----hp~~~l~~~~s~~ 37 (313)
T PRK11863 7 IDGEAGTTGLQIRERLAG----RSDIELLSIPEAK 37 (313)
T ss_pred EECCCCHHHHHHHHHHhc----CCCeEEEEEecCC
Confidence 899999999999998872 3334777776553
No 360
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=83.66 E-value=1.2 Score=38.63 Aligned_cols=31 Identities=13% Similarity=-0.039 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc--EEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW--EVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~--~V~~l~R~~ 36 (239)
.|+||||.+|+.++..|+ ..|+ +|++++|..
T Consensus 4 ~IiGatG~vG~~~a~~l~-----~~g~~~~v~lvd~~~ 36 (309)
T cd05294 4 SIIGASGRVGSATALLLA-----KEDVVKEINLISRPK 36 (309)
T ss_pred EEECCCChHHHHHHHHHH-----hCCCCCEEEEEECcc
Confidence 389999999999999999 6665 599999954
No 361
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=83.57 E-value=1 Score=34.26 Aligned_cols=31 Identities=13% Similarity=0.005 Sum_probs=25.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~ 37 (239)
+|+|+ |.+|+.+++.|. ..| ++|++++|++.
T Consensus 23 ~iiG~-G~~g~~~a~~l~-----~~g~~~v~v~~r~~~ 54 (155)
T cd01065 23 LILGA-GGAARAVAYALA-----ELGAAKIVIVNRTLE 54 (155)
T ss_pred EEECC-cHHHHHHHHHHH-----HCCCCEEEEEcCCHH
Confidence 47886 999999999998 564 78999998754
No 362
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=83.55 E-value=1.6 Score=32.01 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=24.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~ 35 (239)
.|+|++|.+|+.+++.|.. ..++++.++ +|+
T Consensus 3 ~iiG~~g~~g~~~~~~l~~----~~~~~l~av~~~~ 34 (122)
T smart00859 3 AIVGATGYVGQELLRLLAE----HPDFEVVALAASA 34 (122)
T ss_pred EEECCCChHHHHHHHHHhc----CCCceEEEEEech
Confidence 3799999999999999982 357898888 443
No 363
>PRK06444 prephenate dehydrogenase; Provisional
Probab=83.51 E-value=0.92 Score=36.78 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=23.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVY 30 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~ 30 (239)
.|.||+|..|+.+++.|. +.||.|+
T Consensus 4 ~iiG~~G~mG~~~~~~~~-----~~g~~v~ 28 (197)
T PRK06444 4 IIIGKNGRLGRVLCSILD-----DNGLGVY 28 (197)
T ss_pred EEEecCCcHHHHHHHHHH-----hCCCEEE
Confidence 489999999999999998 8899987
No 364
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=83.01 E-value=1.5 Score=33.38 Aligned_cols=32 Identities=16% Similarity=0.058 Sum_probs=25.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|+||+|.+|++++-.|.++ .-+.|++.++++.
T Consensus 5 IiGa~G~VG~~~a~~l~~~---~l~~ei~L~D~~~ 36 (141)
T PF00056_consen 5 IIGAAGNVGSTLALLLAQQ---GLADEIVLIDINE 36 (141)
T ss_dssp EESTTSHHHHHHHHHHHHT---TTSSEEEEEESSH
T ss_pred EECCCChHHHHHHHHHHhC---CCCCceEEeccCc
Confidence 8999999999999999831 2234788888874
No 365
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=82.85 E-value=1.2 Score=37.85 Aligned_cols=31 Identities=16% Similarity=0.083 Sum_probs=26.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|+ |.+|++++..|. ..|++|+.++|++.
T Consensus 121 liiGa-Gg~g~aia~~L~-----~~g~~v~v~~R~~~ 151 (270)
T TIGR00507 121 LIIGA-GGAARAVALPLL-----KADCNVIIANRTVS 151 (270)
T ss_pred EEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 57887 899999999999 77899999999753
No 366
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=82.72 E-value=1.4 Score=34.71 Aligned_cols=30 Identities=13% Similarity=0.032 Sum_probs=26.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
||+|+++++|..+++.|. +.|.+|+.+.|+
T Consensus 48 lViG~G~~~G~~~a~~L~-----~~g~~V~v~~r~ 77 (168)
T cd01080 48 VVVGRSNIVGKPLAALLL-----NRNATVTVCHSK 77 (168)
T ss_pred EEECCcHHHHHHHHHHHh-----hCCCEEEEEECC
Confidence 589997788999999998 788889988886
No 367
>PRK06849 hypothetical protein; Provisional
Probab=82.72 E-value=1.3 Score=39.53 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=28.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||||++..+|..+++.|. +.|++|++++..+.
T Consensus 8 LI~G~~~~~~l~iar~l~-----~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 8 LITGARAPAALELARLFH-----NAGHTVILADSLKY 39 (389)
T ss_pred EEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 699999999999999999 88999999988753
No 368
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=82.39 E-value=1.2 Score=38.63 Aligned_cols=32 Identities=19% Similarity=-0.009 Sum_probs=27.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+||+|.+|..+++.+. ..|.+|+++++++.
T Consensus 156 lI~Ga~G~vG~~aiqlAk-----~~G~~Vi~~~~~~~ 187 (338)
T cd08295 156 FVSAASGAVGQLVGQLAK-----LKGCYVVGSAGSDE 187 (338)
T ss_pred EEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 689999999999998777 78999999888653
No 369
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=82.38 E-value=0.75 Score=43.94 Aligned_cols=55 Identities=11% Similarity=-0.052 Sum_probs=42.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHH
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
|.| .|-+|+.+++.|. ++|++++++..++.... ....+.. .+.+|.+|++-++++
T Consensus 405 I~G-~Gr~G~~va~~L~-----~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~a 460 (621)
T PRK03562 405 IAG-FGRFGQIVGRLLL-----SSGVKMTVLDHDPDHIETLRKFGMK-VFYGDATRMDLLESA 460 (621)
T ss_pred EEe-cChHHHHHHHHHH-----hCCCCEEEEECCHHHHHHHHhcCCe-EEEEeCCCHHHHHhc
Confidence 444 6999999999999 88999999998865311 1235677 899999999876554
No 370
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=82.29 E-value=1.6 Score=32.90 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=25.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
.|.|+||-||+..++-+.++ +..++|++++=+
T Consensus 2 ~ILGsTGSIG~qtLdVi~~~---~d~f~v~~Lsa~ 33 (129)
T PF02670_consen 2 AILGSTGSIGTQTLDVIRKH---PDKFEVVALSAG 33 (129)
T ss_dssp EEESTTSHHHHHHHHHHHHC---TTTEEEEEEEES
T ss_pred EEEcCCcHHHHHHHHHHHhC---CCceEEEEEEcC
Confidence 38999999999999988732 335899988754
No 371
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=81.69 E-value=1.4 Score=33.42 Aligned_cols=30 Identities=17% Similarity=0.250 Sum_probs=26.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|.|+ |-||..++..|. +.|++|..++|++
T Consensus 2 ~I~G~-GaiG~~~a~~L~-----~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 2 LIIGA-GAIGSLYAARLA-----QAGHDVTLVSRSP 31 (151)
T ss_dssp EEEST-SHHHHHHHHHHH-----HTTCEEEEEESHH
T ss_pred EEECc-CHHHHHHHHHHH-----HCCCceEEEEccc
Confidence 36675 889999999998 7899999999987
No 372
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=81.51 E-value=2.2 Score=28.06 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.5
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| +|..|-..+..|. +.|++|..+-+++.
T Consensus 1 IiG-aG~sGl~aA~~L~-----~~g~~v~v~E~~~~ 30 (68)
T PF13450_consen 1 IIG-AGISGLAAAYYLA-----KAGYRVTVFEKNDR 30 (68)
T ss_dssp EES--SHHHHHHHHHHH-----HTTSEEEEEESSSS
T ss_pred CEe-eCHHHHHHHHHHH-----HCCCcEEEEecCcc
Confidence 566 4999999999999 78999999998764
No 373
>PRK10537 voltage-gated potassium channel; Provisional
Probab=81.28 E-value=2.7 Score=37.89 Aligned_cols=54 Identities=15% Similarity=-0.009 Sum_probs=40.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHH
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
|.| .|-+|+.++++|. ++|++|+.+..+... .....++. ++.+|.+|++.++++
T Consensus 245 I~G-~g~lg~~v~~~L~-----~~g~~vvVId~d~~~-~~~~~g~~-vI~GD~td~e~L~~A 298 (393)
T PRK10537 245 ICG-HSPLAINTYLGLR-----QRGQAVTVIVPLGLE-HRLPDDAD-LIPGDSSDSAVLKKA 298 (393)
T ss_pred EEC-CChHHHHHHHHHH-----HCCCCEEEEECchhh-hhccCCCc-EEEeCCCCHHHHHhc
Confidence 455 5899999999998 788898888755322 11235678 999999998877655
No 374
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=81.27 E-value=1.3 Score=37.91 Aligned_cols=31 Identities=19% Similarity=-0.068 Sum_probs=26.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+++|.|.+|+.+++.|. ..||.|..+.+...
T Consensus 7 ~IvG~GliG~s~a~~l~-----~~g~~v~i~g~d~~ 37 (279)
T COG0287 7 GIVGLGLMGGSLARALK-----EAGLVVRIIGRDRS 37 (279)
T ss_pred EEECCchHHHHHHHHHH-----HcCCeEEEEeecCc
Confidence 56779999999999999 89999877776644
No 375
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=80.79 E-value=4.9 Score=35.70 Aligned_cols=59 Identities=10% Similarity=-0.174 Sum_probs=44.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
|+|| |.+|+-++.+.. +-|++|+.+.-++...... -.-. .+..+..|++++++..+.++
T Consensus 6 IlGG-GQLgrMm~~aa~-----~lG~~v~vLdp~~~~PA~~-va~~-~i~~~~dD~~al~ela~~~D 64 (375)
T COG0026 6 ILGG-GQLGRMMALAAA-----RLGIKVIVLDPDADAPAAQ-VADR-VIVAAYDDPEALRELAAKCD 64 (375)
T ss_pred EEcC-cHHHHHHHHHHH-----hcCCEEEEecCCCCCchhh-cccc-eeecCCCCHHHHHHHHhhCC
Confidence 5674 999999999988 8899999998665432100 1113 67788889999999998875
No 376
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=80.77 E-value=2.2 Score=37.58 Aligned_cols=29 Identities=21% Similarity=0.179 Sum_probs=22.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCC---CcEEEEEecC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGG---PWEVYGSAWC 35 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~---g~~V~~l~R~ 35 (239)
|.||||++|..|++.|. .+ ..++..++..
T Consensus 9 IvGATG~vG~ellrlL~-----~~~hP~~~l~~laS~ 40 (336)
T PRK08040 9 LLGATGAVGEALLELLA-----ERQFPVGELYALASE 40 (336)
T ss_pred EEccCCHHHHHHHHHHh-----cCCCCceEEEEEEcc
Confidence 89999999999999887 42 3366666543
No 377
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=80.71 E-value=1.5 Score=37.73 Aligned_cols=30 Identities=23% Similarity=0.134 Sum_probs=26.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|| |.+|..++.+|. ++|++|+.+.+..
T Consensus 3 vIIGa-Gi~G~~~A~~La-----~~G~~V~l~e~~~ 32 (358)
T PF01266_consen 3 VIIGA-GIAGLSTAYELA-----RRGHSVTLLERGD 32 (358)
T ss_dssp EEECT-SHHHHHHHHHHH-----HTTSEEEEEESSS
T ss_pred EEECc-CHHHHHHHHHHH-----HCCCeEEEEeecc
Confidence 36775 999999999999 8999999999984
No 378
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=80.55 E-value=4.5 Score=37.32 Aligned_cols=63 Identities=10% Similarity=-0.085 Sum_probs=43.6
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
.||..|.+|++++. .+|++|+.++-... .. .+.+++ .+. +...+++.+++..... .|.++++|
T Consensus 280 SSGkmG~alA~aa~-----~~GA~VtlI~Gp~~-~~-~p~~v~-~i~--V~ta~eM~~av~~~~~-~Di~I~aA 342 (475)
T PRK13982 280 SSGKQGFAIAAAAA-----AAGAEVTLISGPVD-LA-DPQGVK-VIH--VESARQMLAAVEAALP-ADIAIFAA 342 (475)
T ss_pred CchHHHHHHHHHHH-----HCCCcEEEEeCCcC-CC-CCCCce-EEE--ecCHHHHHHHHHhhCC-CCEEEEec
Confidence 58999999999999 89999999973321 11 235676 554 4556677777755433 57777776
No 379
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.49 E-value=2.3 Score=37.11 Aligned_cols=61 Identities=10% Similarity=-0.031 Sum_probs=41.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC--CCCCCCCceeeEeecCCCchhHHHHHhcccC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQ--SWFPSSAVDHYITFDATNSGNTTEKLSLLFN 69 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~ 69 (239)
|+|+.| +|+--++... .-|++|+++++.... ...+..+.+ +...-..|++.++++....+.
T Consensus 187 I~GlGG-LGh~aVq~AK-----AMG~rV~vis~~~~kkeea~~~LGAd-~fv~~~~d~d~~~~~~~~~dg 249 (360)
T KOG0023|consen 187 IVGLGG-LGHMAVQYAK-----AMGMRVTVISTSSKKKEEAIKSLGAD-VFVDSTEDPDIMKAIMKTTDG 249 (360)
T ss_pred EecCcc-cchHHHHHHH-----HhCcEEEEEeCCchhHHHHHHhcCcc-eeEEecCCHHHHHHHHHhhcC
Confidence 789988 9988888777 789999999998632 112235666 443333377777766665543
No 380
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=80.32 E-value=1.7 Score=35.13 Aligned_cols=31 Identities=13% Similarity=0.077 Sum_probs=26.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|. |.+|+++++.|. +.|++|++.++++.
T Consensus 32 ~I~G~-G~vG~~~A~~L~-----~~G~~Vvv~D~~~~ 62 (200)
T cd01075 32 AVQGL-GKVGYKLAEHLL-----EEGAKLIVADINEE 62 (200)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 36775 899999999999 89999998887643
No 381
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=80.22 E-value=1.6 Score=40.93 Aligned_cols=31 Identities=19% Similarity=0.040 Sum_probs=27.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+|| |.+|++++..|. ..|++|+.++|+..
T Consensus 383 lIlGa-GGagrAia~~L~-----~~G~~V~i~nR~~e 413 (529)
T PLN02520 383 VVIGA-GGAGKALAYGAK-----EKGARVVIANRTYE 413 (529)
T ss_pred EEECC-cHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 58998 899999999999 78899999998643
No 382
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=79.64 E-value=1.9 Score=38.51 Aligned_cols=30 Identities=20% Similarity=0.141 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|| |++|..++.+|. +.|++|+.+.|..
T Consensus 4 ~IVG~-Gi~Gls~A~~l~-----~~g~~V~vle~~~ 33 (416)
T PRK00711 4 VVLGS-GVIGVTSAWYLA-----QAGHEVTVIDRQP 33 (416)
T ss_pred EEECC-cHHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 47776 999999999999 7899999999974
No 383
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=79.39 E-value=1.6 Score=39.64 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=26.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|||++| +|.+.++.|. +.|++|++..++.
T Consensus 9 ~v~G~g~-~G~s~a~~l~-----~~G~~V~~~d~~~ 38 (447)
T PRK02472 9 LVLGLAK-SGYAAAKLLH-----KLGANVTVNDGKP 38 (447)
T ss_pred EEEeeCH-HHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 5899977 9999999999 8999999998764
No 384
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=79.31 E-value=2 Score=36.91 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=26.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
+|.|++|.+|+.++..|. ..|.+|+.+.|+
T Consensus 163 vViG~gg~vGkpia~~L~-----~~gatVtv~~~~ 192 (283)
T PRK14192 163 VVVGRSAILGKPMAMMLL-----NANATVTICHSR 192 (283)
T ss_pred EEECCcHHHHHHHHHHHH-----hCCCEEEEEeCC
Confidence 589999999999999998 778888888774
No 385
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=79.19 E-value=3.7 Score=35.69 Aligned_cols=61 Identities=7% Similarity=-0.149 Sum_probs=45.8
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCce-eeEeecCCCchhHHHHHhcccCcceEEE
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVD-HYITFDATNSGNTTEKLSLLFNEITHVH 75 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~-~~~~~Dl~d~~~~~~~l~~~~~~v~~v~ 75 (239)
|||=+|..++-++. +-|.+|++++|=..... .+|- .-...|.+|.++++..++..+ +|.++
T Consensus 19 GSGELGKEvaIe~Q-----RLG~eViAVDrY~~APA---mqVAhrs~Vi~MlD~~al~avv~rek--Pd~IV 80 (394)
T COG0027 19 GSGELGKEVAIEAQ-----RLGVEVIAVDRYANAPA---MQVAHRSYVIDMLDGDALRAVVEREK--PDYIV 80 (394)
T ss_pred cCCccchHHHHHHH-----hcCCEEEEecCcCCChh---hhhhhheeeeeccCHHHHHHHHHhhC--CCeee
Confidence 48999999999998 88999999999643211 1221 145689999999999998765 56654
No 386
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=79.18 E-value=1.2 Score=42.35 Aligned_cols=54 Identities=7% Similarity=-0.203 Sum_probs=42.0
Q ss_pred cccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-CCCCCCceeeEeecCCCchhHHHH
Q 048469 4 GIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-WFPSSAVDHYITFDATNSGNTTEK 63 (239)
Q Consensus 4 GatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~~Dl~d~~~~~~~ 63 (239)
=|.|-+|+.+++.|. +.|++++++.+++... .....+.. .+.+|.+|++.++++
T Consensus 406 ~G~Gr~G~~va~~L~-----~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~a 460 (601)
T PRK03659 406 VGFGRFGQVIGRLLM-----ANKMRITVLERDISAVNLMRKYGYK-VYYGDATQLELLRAA 460 (601)
T ss_pred ecCchHHHHHHHHHH-----hCCCCEEEEECCHHHHHHHHhCCCe-EEEeeCCCHHHHHhc
Confidence 347999999999999 8899999999886531 11235677 899999999877654
No 387
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=78.86 E-value=2.7 Score=35.41 Aligned_cols=31 Identities=16% Similarity=0.123 Sum_probs=24.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
.|+|++|.+|+.+++.+.+ ..+.++.++...
T Consensus 5 ~IiG~~G~mG~~i~~~l~~----~~~~elvav~d~ 35 (257)
T PRK00048 5 AVAGASGRMGRELIEAVEA----AEDLELVAAVDR 35 (257)
T ss_pred EEECCCCHHHHHHHHHHHh----CCCCEEEEEEec
Confidence 4899999999999998872 356897775443
No 388
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=78.81 E-value=2.1 Score=37.62 Aligned_cols=31 Identities=10% Similarity=-0.083 Sum_probs=26.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|| |.+|.+++.+|. ++|++|+.+.+...
T Consensus 4 vIIGa-Gi~G~s~A~~La-----~~g~~V~l~e~~~~ 34 (380)
T TIGR01377 4 IVVGA-GIMGCFAAYHLA-----KHGKKTLLLEQFDL 34 (380)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCeEEEEeccCC
Confidence 47785 999999999999 78999999998643
No 389
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=78.75 E-value=1.9 Score=36.90 Aligned_cols=30 Identities=7% Similarity=0.026 Sum_probs=26.4
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+|+ |.+|+.++..|. ..||+|++.+|++.
T Consensus 6 VIG~-G~mG~~iA~~la-----~~G~~V~~~d~~~~ 35 (288)
T PRK09260 6 VVGA-GVMGRGIAYVFA-----VSGFQTTLVDIKQE 35 (288)
T ss_pred EECc-cHHHHHHHHHHH-----hCCCcEEEEeCCHH
Confidence 6675 999999999999 78999999998754
No 390
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=78.65 E-value=6.6 Score=31.00 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=27.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.||-|-+|++.++.+. .++|-|..++-...
T Consensus 7 ivYGGkGALGSacv~~Fk-----annywV~siDl~eN 38 (236)
T KOG4022|consen 7 IVYGGKGALGSACVEFFK-----ANNYWVLSIDLSEN 38 (236)
T ss_pred EEEcCcchHhHHHHHHHH-----hcCeEEEEEeeccc
Confidence 588999999999999999 88999887766543
No 391
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=78.59 E-value=2 Score=36.51 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=26.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| .|.+|..++..|. ..|++|++.+|++.
T Consensus 5 IIG-~G~mG~sla~~L~-----~~g~~V~~~d~~~~ 34 (279)
T PRK07417 5 IVG-LGLIGGSLGLDLR-----SLGHTVYGVSRRES 34 (279)
T ss_pred EEe-ecHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 566 7999999999999 78999999998753
No 392
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=78.43 E-value=2.1 Score=36.51 Aligned_cols=31 Identities=19% Similarity=0.087 Sum_probs=26.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.|+ |-+|..++..|. ..|++|+.++|++.
T Consensus 4 ~IiG~-G~~G~~~a~~L~-----~~g~~V~~~~r~~~ 34 (304)
T PRK06522 4 AILGA-GAIGGLFGAALA-----QAGHDVTLVARRGA 34 (304)
T ss_pred EEECC-CHHHHHHHHHHH-----hCCCeEEEEECChH
Confidence 36775 999999999999 78999999999643
No 393
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=78.35 E-value=2.2 Score=36.73 Aligned_cols=32 Identities=19% Similarity=0.060 Sum_probs=27.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+||+|.+|..+++.+. ..|.+|+++++++.
T Consensus 143 LI~ga~g~vG~~aiqlAk-----~~G~~Vi~~~~s~~ 174 (325)
T TIGR02825 143 MVNAAAGAVGSVVGQIAK-----LKGCKVVGAAGSDE 174 (325)
T ss_pred EEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 689999999999998777 78999999887653
No 394
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=78.32 E-value=3 Score=37.61 Aligned_cols=66 Identities=14% Similarity=-0.010 Sum_probs=40.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCcceEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVH 75 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~ 75 (239)
||+|+ |..+..|++.+. ..|+.++++.-...+......... ++..|..|.+.+.+.++..+ ++.++
T Consensus 4 liiG~-G~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~--id~vi 69 (423)
T TIGR00877 4 LVIGN-GGREHALAWKLA-----QSPLVKYVYVAPGNAGTARLAKNK-NVAISITDIEALVEFAKKKK--IDLAV 69 (423)
T ss_pred EEECC-ChHHHHHHHHHH-----hCCCccEEEEECCCHHHhhhcccc-cccCCCCCHHHHHHHHHHhC--CCEEE
Confidence 57886 666999999999 667654444322211110011123 55678899998888887764 65554
No 395
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=78.30 E-value=1.7 Score=33.84 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=25.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
++| .|-.|+.++++|. +.||+|++.+|++.
T Consensus 6 ~IG-lG~mG~~~a~~L~-----~~g~~v~~~d~~~~ 35 (163)
T PF03446_consen 6 FIG-LGNMGSAMARNLA-----KAGYEVTVYDRSPE 35 (163)
T ss_dssp EE---SHHHHHHHHHHH-----HTTTEEEEEESSHH
T ss_pred EEc-hHHHHHHHHHHHH-----hcCCeEEeeccchh
Confidence 445 5999999999999 89999999999864
No 396
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=78.28 E-value=3.4 Score=36.24 Aligned_cols=17 Identities=24% Similarity=0.347 Sum_probs=16.2
Q ss_pred eecccChhHHHHHHHhh
Q 048469 2 VIGIVSMADLSFTEALK 18 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~ 18 (239)
|.||||.+|+.+++.|.
T Consensus 6 vvGATG~VG~~~~~~L~ 22 (334)
T COG0136 6 VLGATGAVGQVLLELLE 22 (334)
T ss_pred EEeccchHHHHHHHHHH
Confidence 78999999999999888
No 397
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=78.24 E-value=5.1 Score=35.67 Aligned_cols=17 Identities=12% Similarity=0.321 Sum_probs=16.1
Q ss_pred eecccChhHHHHHHHhh
Q 048469 2 VIGIVSMADLSFTEALK 18 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~ 18 (239)
|.||||.+|+.+++.|.
T Consensus 5 vvGATG~VG~~ll~~L~ 21 (366)
T TIGR01745 5 LVGWRGMVGSVLMQRMQ 21 (366)
T ss_pred EEcCcCHHHHHHHHHHH
Confidence 79999999999999887
No 398
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=78.20 E-value=1.7 Score=37.94 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=24.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
||+||||.||+..++-+. ..|+.+++.+.++
T Consensus 147 LV~gaaGgVG~~aiQlAk-----~~G~~~v~~~~s~ 177 (326)
T COG0604 147 LVHGAAGGVGSAAIQLAK-----ALGATVVAVVSSS 177 (326)
T ss_pred EEecCCchHHHHHHHHHH-----HcCCcEEEEecCH
Confidence 799999999999998777 7786655554443
No 399
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=78.16 E-value=2 Score=36.80 Aligned_cols=32 Identities=19% Similarity=0.069 Sum_probs=27.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+||+|-+|..+++.+. ..|.+|+++++++.
T Consensus 148 lI~ga~g~vG~~aiqlA~-----~~G~~vi~~~~s~~ 179 (329)
T cd08294 148 VVNGAAGAVGSLVGQIAK-----IKGCKVIGCAGSDD 179 (329)
T ss_pred EEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 689999999999998887 78899999887653
No 400
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=78.15 E-value=2.8 Score=36.45 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=22.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEe
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSA 33 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~ 33 (239)
.|.||||+.|..|++.|.. ....++..++
T Consensus 5 ~IvGasGy~G~el~rlL~~----HP~~el~~l~ 33 (310)
T TIGR01851 5 FIDGEAGTTGLQIRERLSG----RDDIELLSIA 33 (310)
T ss_pred EEECCCChhHHHHHHHHhC----CCCeEEEEEe
Confidence 3899999999999999882 4445766664
No 401
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=78.04 E-value=1.3 Score=33.32 Aligned_cols=29 Identities=28% Similarity=0.420 Sum_probs=24.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEE-ecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGS-AWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l-~R~~ 36 (239)
|+|+ |-+|++|.+.|. +.||+|.++ +|++
T Consensus 15 iIGa-GrVG~~La~aL~-----~ag~~v~~v~srs~ 44 (127)
T PF10727_consen 15 IIGA-GRVGTALARALA-----RAGHEVVGVYSRSP 44 (127)
T ss_dssp EECT-SCCCCHHHHHHH-----HTTSEEEEESSCHH
T ss_pred EECC-CHHHHHHHHHHH-----HCCCeEEEEEeCCc
Confidence 5675 999999999999 889999988 4543
No 402
>PRK08818 prephenate dehydrogenase; Provisional
Probab=78.03 E-value=2.2 Score=38.12 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=26.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
.|+|.+|.+|+.+++.|.+ ..+++|++++|..
T Consensus 8 ~IIGl~GliGgslA~alk~----~~~~~V~g~D~~d 39 (370)
T PRK08818 8 GIVGSAGAYGRWLARFLRT----RMQLEVIGHDPAD 39 (370)
T ss_pred EEECCCCHHHHHHHHHHHh----cCCCEEEEEcCCc
Confidence 4889999999999999982 2488999998853
No 403
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=77.67 E-value=2.4 Score=37.25 Aligned_cols=31 Identities=13% Similarity=0.152 Sum_probs=26.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|| |++|.+++.+|. +.|++|+.+.+...
T Consensus 4 ~IIG~-Gi~G~s~A~~L~-----~~G~~V~vle~~~~ 34 (365)
T TIGR03364 4 IIVGA-GILGLAHAYAAA-----RRGLSVTVIERSSR 34 (365)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCeEEEEeCCCC
Confidence 36775 999999999999 78999999998753
No 404
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=77.32 E-value=2.1 Score=37.11 Aligned_cols=32 Identities=13% Similarity=-0.058 Sum_probs=27.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~~ 37 (239)
||+||+|-+|..+++.+. ..|. +|++++++..
T Consensus 159 lI~ga~g~vG~~aiqlAk-----~~G~~~Vi~~~~s~~ 191 (345)
T cd08293 159 VVSGAAGACGSLAGQIGR-----LLGCSRVVGICGSDE 191 (345)
T ss_pred EEECCCcHHHHHHHHHHH-----HcCCCEEEEEcCCHH
Confidence 689999999999998777 7888 7999987653
No 405
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=77.22 E-value=2.8 Score=36.25 Aligned_cols=31 Identities=16% Similarity=0.066 Sum_probs=27.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
.|.|.+|.+|+.++..|+ ++|++|+.+.|++
T Consensus 163 ~vIG~s~ivG~PmA~~L~-----~~gatVtv~~~~t 193 (301)
T PRK14194 163 VVIGRSNIVGKPMAALLL-----QAHCSVTVVHSRS 193 (301)
T ss_pred EEECCCCccHHHHHHHHH-----HCCCEEEEECCCC
Confidence 378999999999999999 8999999997654
No 406
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=76.85 E-value=7 Score=34.01 Aligned_cols=50 Identities=10% Similarity=-0.027 Sum_probs=35.2
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
|.|-||+.+++.|. .-|++|++.+|.+... +++. .. ...+++.+++++.+
T Consensus 143 G~G~IG~~vA~~l~-----afG~~V~~~~~~~~~~----~~~~-~~----~~~~~l~e~l~~aD 192 (312)
T PRK15469 143 GAGVLGSKVAQSLQ-----TWGFPLRCWSRSRKSW----PGVQ-SF----AGREELSAFLSQTR 192 (312)
T ss_pred CCCHHHHHHHHHHH-----HCCCEEEEEeCCCCCC----CCce-ee----cccccHHHHHhcCC
Confidence 47999999999999 8899999998864321 2222 11 12456778888764
No 407
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=76.80 E-value=2.6 Score=36.12 Aligned_cols=30 Identities=13% Similarity=0.066 Sum_probs=26.8
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.|+ |.+|+.++..|+ ..||+|+..++++.
T Consensus 10 ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~ 39 (286)
T PRK07819 10 VVGA-GQMGAGIAEVCA-----RAGVDVLVFETTEE 39 (286)
T ss_pred EEcc-cHHHHHHHHHHH-----hCCCEEEEEECCHH
Confidence 6775 999999999999 88999999999865
No 408
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=76.74 E-value=2.5 Score=36.13 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=26.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+|+ |.+|+.++..|. ..|++|++.++++.
T Consensus 8 ViGa-G~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (291)
T PRK06035 8 VVGS-GVMGQGIAQVFA-----RTGYDVTIVDVSEE 37 (291)
T ss_pred EECc-cHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 6674 999999999999 88999999998753
No 409
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=76.57 E-value=4.2 Score=35.58 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=24.8
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCc-------EEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPW-------EVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~-------~V~~l~R~~ 36 (239)
|+||+|.||++++-.|. .+|. +++.++++.
T Consensus 7 IiGa~G~VG~~~a~~l~-----~~~~~~~~~~~el~L~Di~~ 43 (322)
T cd01338 7 VTGAAGQIGYSLLFRIA-----SGEMFGPDQPVILQLLELPQ 43 (322)
T ss_pred EECCCcHHHHHHHHHHH-----hccccCCCCceEEEEEecCC
Confidence 89999999999999998 4554 788888754
No 410
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=76.49 E-value=2.4 Score=36.41 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=26.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|+ |.+|+.+++.|. ..|++|++.+|++.
T Consensus 155 ~IiG~-G~iG~avA~~L~-----~~G~~V~v~~R~~~ 185 (287)
T TIGR02853 155 MVLGF-GRTGMTIARTFS-----ALGARVFVGARSSA 185 (287)
T ss_pred EEEcC-hHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46775 889999999999 78999999999754
No 411
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=76.44 E-value=2.7 Score=34.09 Aligned_cols=30 Identities=7% Similarity=-0.229 Sum_probs=25.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
||+|| |-+|...++.|+ ..|++|+.+++..
T Consensus 14 LVIGg-G~va~~ka~~Ll-----~~ga~V~VIs~~~ 43 (202)
T PRK06718 14 VIVGG-GKVAGRRAITLL-----KYGAHIVVISPEL 43 (202)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 57776 999999999999 7889999998753
No 412
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=76.23 E-value=2.8 Score=36.30 Aligned_cols=30 Identities=13% Similarity=0.042 Sum_probs=26.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|.| .|-||..++..|. +.|++|+.++|++
T Consensus 9 ~IiG-~GaiG~~lA~~L~-----~~g~~V~~~~r~~ 38 (313)
T PRK06249 9 GIIG-TGAIGGFYGAMLA-----RAGFDVHFLLRSD 38 (313)
T ss_pred EEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCC
Confidence 3666 5999999999998 7899999999975
No 413
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=76.22 E-value=2.1 Score=34.28 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=23.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| .|++|..++-.|. ..||+|+++..++.
T Consensus 5 ViG-lGyvGl~~A~~lA-----~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 5 VIG-LGYVGLPLAAALA-----EKGHQVIGVDIDEE 34 (185)
T ss_dssp EE---STTHHHHHHHHH-----HTTSEEEEE-S-HH
T ss_pred EEC-CCcchHHHHHHHH-----hCCCEEEEEeCChH
Confidence 454 7999999999999 89999999998753
No 414
>PF00479 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD binding domain; InterPro: IPR022674 Glucose-6-phosphate dehydrogenase (1.1.1.49 from EC) (G6PDH) is a ubiquitous protein, present in bacteria and all eukaryotic cell types []. The enzyme catalyses the the first step in the pentose pathway, i.e. the conversion of glucose-6-phosphate to gluconolactone 6-phosphate in the presence of NADP, producing NADPH. The ubiquitous expression of the enzyme gives it a major role in the production of NADPH for the many NADPH-mediated reductive processes in all cells []. Deficiency of G6PDH is a common genetic abnormality affecting millions of people worldwide. Many sequence variants, most caused by single point mutations, are known, exhibiting a wide variety of phenotypes []. This entry represents the NAD-binding domain of glucose-6-phosphate dehydrogenase.; GO: 0004345 glucose-6-phosphate dehydrogenase activity, 0050661 NADP binding, 0006006 glucose metabolic process, 0055114 oxidation-reduction process; PDB: 4EM5_C 4E9I_A 2DPG_A 1E77_A 1E7M_A 1H9B_A 1E7Y_A 1DPG_B 1H93_A 1H9A_A ....
Probab=76.12 E-value=2.3 Score=34.06 Aligned_cols=62 Identities=15% Similarity=0.163 Sum_probs=34.4
Q ss_pred CeecccChhHHH-HHHHhhc---CCCCCCCcEEEEEecCCCCC--C-------CC---------------CCCceeeEee
Q 048469 1 MVIGIVSMADLS-FTEALKS---PIALGGPWEVYGSAWCPKQS--W-------FP---------------SSAVDHYITF 52 (239)
Q Consensus 1 LVtGatG~iG~~-lv~~L~~---~~~~~~g~~V~~l~R~~~~~--~-------~~---------------~~~v~~~~~~ 52 (239)
.|+||||=+.+. |...|.. ....+.++.|++++|++.+. . .. ..++. ++++
T Consensus 1 VifGatGDLA~RKL~PaL~~L~~~g~lp~~~~Iig~~R~~~~~~~f~~~v~~~l~~~~~~~~~~~~~~~F~~~~~-Y~~~ 79 (183)
T PF00479_consen 1 VIFGATGDLAKRKLLPALYNLYRDGLLPEDFRIIGVARSDLSDEEFREKVREALKKFSREEIDEEKWEEFLSRLH-YVQG 79 (183)
T ss_dssp EEETTTSHHHHHTHHHHHHHHHHTTSS-SSEEEEEEESS--SHHCCHHHHHHCCGG-S-CCCSHHHHHHHHTTEE-EEE-
T ss_pred CEeccccHHHHhHHHHHHHHHHHhCCCCCCcEEEEecCCcCCHHHHHHHHHHHHHhhhccccCHHHHHHHhhccE-EEeC
Confidence 489999988765 4443321 11114568999999987431 0 00 24577 8999
Q ss_pred cCCCchhHHHH
Q 048469 53 DATNSGNTTEK 63 (239)
Q Consensus 53 Dl~d~~~~~~~ 63 (239)
|+.++++..+.
T Consensus 80 d~~~~~~y~~L 90 (183)
T PF00479_consen 80 DYDDPESYAAL 90 (183)
T ss_dssp -SS-HHHHHHH
T ss_pred CCCCchhHHHH
Confidence 99988654443
No 415
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=75.83 E-value=4.2 Score=35.84 Aligned_cols=30 Identities=17% Similarity=0.015 Sum_probs=25.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc-EEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW-EVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 36 (239)
+|.|+ |.+|+.+++.|. ..|. +|+.+++..
T Consensus 28 lVvG~-GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (339)
T PRK07688 28 LIIGA-GALGTANAEMLV-----RAGVGKVTIVDRDY 58 (339)
T ss_pred EEECC-CHHHHHHHHHHH-----HcCCCeEEEEeCCc
Confidence 47776 999999999999 7888 799988864
No 416
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=75.65 E-value=2.9 Score=36.15 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=26.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEe-cC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSA-WC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~-R~ 35 (239)
.|.|-+|.+|+.++..|+ .+|++|+.+. |+
T Consensus 162 ~viGrs~~mG~PmA~~L~-----~~g~tVtv~~~rT 192 (296)
T PRK14188 162 VVIGRSNLVGKPMAQLLL-----AANATVTIAHSRT 192 (296)
T ss_pred EEEcCCcchHHHHHHHHH-----hCCCEEEEECCCC
Confidence 378999999999999999 8899999994 54
No 417
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=75.61 E-value=2.8 Score=32.41 Aligned_cols=29 Identities=21% Similarity=0.042 Sum_probs=25.9
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|.|| |-.|.+++..|. ..|++|+..+|++
T Consensus 4 ViGa-G~~G~AlA~~la-----~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 4 VIGA-GNWGTALAALLA-----DNGHEVTLWGRDE 32 (157)
T ss_dssp EESS-SHHHHHHHHHHH-----HCTEEEEEETSCH
T ss_pred EECc-CHHHHHHHHHHH-----HcCCEEEEEeccH
Confidence 6674 999999999999 8899999999985
No 418
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=75.48 E-value=2.8 Score=37.36 Aligned_cols=30 Identities=17% Similarity=0.054 Sum_probs=26.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC--CcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG--PWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~--g~~V~~l~R~~ 36 (239)
+|+|| |.+|..++.+|. +. |++|+.+.|.+
T Consensus 6 vIIGg-Gi~G~s~A~~La-----~~~~g~~V~llE~~~ 37 (393)
T PRK11728 6 VIIGG-GIVGLSTAMQLQ-----ERYPGARIAVLEKES 37 (393)
T ss_pred EEECC-cHHHHHHHHHHH-----HhCCCCeEEEEeCCC
Confidence 47786 999999999999 66 99999999975
No 419
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=75.34 E-value=2.9 Score=35.83 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=26.1
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| .|.+|+.++..|+ ..|++|++..+++.
T Consensus 9 vIG-~G~mG~~iA~~l~-----~~G~~V~~~d~~~~ 38 (295)
T PLN02545 9 VVG-AGQMGSGIAQLAA-----AAGMDVWLLDSDPA 38 (295)
T ss_pred EEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 566 4999999999999 78999999998753
No 420
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=75.28 E-value=9.3 Score=32.39 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=25.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R~~~ 37 (239)
.|.||+|-.|+.|++.+.+ ..+.+ +-++.|.+.
T Consensus 6 ~V~Ga~GRMG~~ii~~v~~----~~~~~L~aa~~~~~~ 39 (266)
T COG0289 6 AVAGASGRMGRTLIRAVLE----APDLELVAAFDRPGS 39 (266)
T ss_pred EEEcCCChHHHHHHHHHhc----CCCceEEEEEecCCc
Confidence 4899999999999999883 45678 556677654
No 421
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=75.07 E-value=3.2 Score=36.30 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=26.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| +|.+|+.++..++ ..|++|++.++++.
T Consensus 12 VIG-aG~MG~giA~~~a-----~aG~~V~l~D~~~~ 41 (321)
T PRK07066 12 AIG-SGVIGSGWVARAL-----AHGLDVVAWDPAPG 41 (321)
T ss_pred EEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 666 5999999999999 89999999998753
No 422
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=75.03 E-value=2.9 Score=36.64 Aligned_cols=31 Identities=19% Similarity=-0.014 Sum_probs=26.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
||+||+|-+|..+++.+. ..|.+|+++++++
T Consensus 163 lV~GaaG~vG~~aiqlAk-----~~G~~Vi~~~~~~ 193 (348)
T PLN03154 163 FVSAASGAVGQLVGQLAK-----LHGCYVVGSAGSS 193 (348)
T ss_pred EEecCccHHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 689999999999998777 7889999887764
No 423
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=74.98 E-value=3.4 Score=32.13 Aligned_cols=28 Identities=18% Similarity=-0.034 Sum_probs=23.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEec
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAW 34 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R 34 (239)
+|.|| |-+|...++.|+ ..|++|+.++.
T Consensus 17 lVvGG-G~va~rka~~Ll-----~~ga~V~VIsp 44 (157)
T PRK06719 17 VIIGG-GKIAYRKASGLK-----DTGAFVTVVSP 44 (157)
T ss_pred EEECC-CHHHHHHHHHHH-----hCCCEEEEEcC
Confidence 46665 999999999999 88999998863
No 424
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=74.93 E-value=2.4 Score=37.78 Aligned_cols=67 Identities=9% Similarity=-0.055 Sum_probs=42.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCchhHHHHHhcccCcceEEEccc
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNSGNTTEKLSLLFNEITHVHDPA 78 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~v~~v~~~a 78 (239)
+|+|+ |-+|...++.|. ..|.+|++++|++.... ....--. .+..+..+++.+.+.+.+. |.|+.++
T Consensus 171 lViGa-G~vG~~aa~~a~-----~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l~~a----DvVI~a~ 238 (370)
T TIGR00518 171 TIIGG-GVVGTNAAKMAN-----GLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAVKRA----DLLIGAV 238 (370)
T ss_pred EEEcC-CHHHHHHHHHHH-----HCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHHccC----CEEEEcc
Confidence 46775 999999999999 78889999998753210 0000001 2334555667787777654 4555543
No 425
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=74.07 E-value=3.2 Score=35.57 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=26.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQ 38 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~ 38 (239)
+|.|| |..|..++..|. +.|++|+.+-|++..
T Consensus 5 ~IvGa-G~aGl~~A~~L~-----~~G~~v~i~E~~~~~ 36 (356)
T PF01494_consen 5 AIVGA-GPAGLAAALALA-----RAGIDVTIIERRPDP 36 (356)
T ss_dssp EEE---SHHHHHHHHHHH-----HTTCEEEEEESSSSC
T ss_pred EEECC-CHHHHHHHHHHH-----hcccccccchhcccc
Confidence 36675 999999999999 899999999998754
No 426
>COG0163 UbiX 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism]
Probab=74.05 E-value=3.9 Score=32.67 Aligned_cols=28 Identities=14% Similarity=0.006 Sum_probs=23.6
Q ss_pred eecccChh-HHHHHHHhhcCCCCCCCcEEEEEec
Q 048469 2 VIGIVSMA-DLSFTEALKSPIALGGPWEVYGSAW 34 (239)
Q Consensus 2 VtGatG~i-G~~lv~~L~~~~~~~~g~~V~~l~R 34 (239)
||||||.+ |-.|++.|. ..|++|+.+.-
T Consensus 9 isGASG~iygvrlLe~L~-----~~~~e~hlviS 37 (191)
T COG0163 9 ISGASGAIYGVRLLEVLR-----ELGVETHLVIS 37 (191)
T ss_pred EeccccHHHHHHHHHHHH-----hcCceEEEEEc
Confidence 79999976 889999998 78899887743
No 427
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=73.98 E-value=3 Score=28.94 Aligned_cols=30 Identities=17% Similarity=0.140 Sum_probs=24.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCC---cEEEEE-ecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGP---WEVYGS-AWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g---~~V~~l-~R~~~ 37 (239)
|+ |+|-+|.+|++.|+ ..| ++|+.. +|++.
T Consensus 4 iI-G~G~mg~al~~~l~-----~~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 4 II-GAGNMGSALARGLL-----ASGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EE-STSHHHHHHHHHHH-----HTTS-GGEEEEEEESSHH
T ss_pred EE-CCCHHHHHHHHHHH-----HCCCCceeEEeeccCcHH
Confidence 45 57999999999999 778 899855 77764
No 428
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=73.90 E-value=9.8 Score=32.52 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=23.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEE
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGS 32 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l 32 (239)
+|.||+|-+|+.+++... ..+.++.+.
T Consensus 4 ~V~Ga~GkMG~~v~~av~-----~~~~~Lv~~ 30 (275)
T TIGR02130 4 MVNGCPGKMGKAVAEAAD-----AAGLEIVPT 30 (275)
T ss_pred EEeCCCChHHHHHHHHHh-----cCCCEEEee
Confidence 488999999999999988 678997774
No 429
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=73.74 E-value=3.6 Score=35.11 Aligned_cols=30 Identities=10% Similarity=-0.054 Sum_probs=26.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.|+ |.+|+.++..|. ..|++|++.++++.
T Consensus 8 ViGa-G~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (287)
T PRK08293 8 VAGA-GVLGSQIAFQTA-----FHGFDVTIYDISDE 37 (287)
T ss_pred EECC-CHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 6774 999999999998 78999999998753
No 430
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=73.24 E-value=3.4 Score=34.71 Aligned_cols=31 Identities=16% Similarity=-0.017 Sum_probs=27.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|++|-+|..+++.+. ..|.+|++++++.
T Consensus 144 lv~g~~~~ig~~~~~~~~-----~~g~~v~~~~~~~ 174 (323)
T cd05276 144 LIHGGASGVGTAAIQLAK-----ALGARVIATAGSE 174 (323)
T ss_pred EEEcCcChHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 589999999999999888 7899999988864
No 431
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=73.22 E-value=3.3 Score=34.73 Aligned_cols=18 Identities=17% Similarity=0.266 Sum_probs=16.7
Q ss_pred CeecccChhHHHHHHHhh
Q 048469 1 MVIGIVSMADLSFTEALK 18 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~ 18 (239)
|||||+|.||.+|+-.+.
T Consensus 8 lVtGAAGqI~ysll~~ia 25 (332)
T KOG1496|consen 8 LVTGAAGQIGYSLLPMIA 25 (332)
T ss_pred EeecccchhhHHHHHHHc
Confidence 699999999999998877
No 432
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=72.95 E-value=4.4 Score=35.26 Aligned_cols=31 Identities=19% Similarity=0.146 Sum_probs=25.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCc--EEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPW--EVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~--~V~~l~R~~ 36 (239)
.|+||+|.||++++-.|. ..+. ++..+++++
T Consensus 3 ~IiGaaG~VG~~~a~~l~-----~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 3 AVLGAAGGIGQPLSLLLK-----LQPYVSELSLYDIAG 35 (312)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCCcEEEEecCCC
Confidence 389999999999999988 4554 788888865
No 433
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=72.85 E-value=8.2 Score=39.43 Aligned_cols=67 Identities=15% Similarity=0.069 Sum_probs=41.2
Q ss_pred CeecccCh----------hHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCc
Q 048469 1 MVIGIVSM----------ADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNE 70 (239)
Q Consensus 1 LVtGatG~----------iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~ 70 (239)
||+|+.+. .|+.++++|. ..|++|+++..++........-.. .+..+-.+.+.+.+.++..+
T Consensus 11 lviG~G~~~igq~~E~d~sg~q~~~aL~-----e~G~~vi~v~~np~~~~~d~~~ad-~~y~ep~~~e~l~~ii~~e~-- 82 (1068)
T PRK12815 11 LVIGSGPIVIGQAAEFDYSGTQACLALK-----EEGYQVVLVNPNPATIMTDPAPAD-TVYFEPLTVEFVKRIIAREK-- 82 (1068)
T ss_pred EEECCCcchhcchhhhhhHHHHHHHHHH-----HcCCEEEEEeCCcchhhcCcccCC-eeEECCCCHHHHHHHHHHhC--
Confidence 68887665 3789999999 899999999877642110001111 22233345667777666543
Q ss_pred ceEEE
Q 048469 71 ITHVH 75 (239)
Q Consensus 71 v~~v~ 75 (239)
+|.++
T Consensus 83 ~D~Ii 87 (1068)
T PRK12815 83 PDALL 87 (1068)
T ss_pred cCEEE
Confidence 56554
No 434
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=72.82 E-value=4.1 Score=35.01 Aligned_cols=30 Identities=17% Similarity=-0.006 Sum_probs=26.2
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
+|+|+++.+|+-++..|. ..|.+|+.+.++
T Consensus 162 vVIGrs~~VG~pla~lL~-----~~gatVtv~~s~ 191 (286)
T PRK14175 162 VVIGRSHIVGQPVSKLLL-----QKNASVTILHSR 191 (286)
T ss_pred EEECCCchhHHHHHHHHH-----HCCCeEEEEeCC
Confidence 589999999999999998 788899888764
No 435
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=72.79 E-value=3.2 Score=35.13 Aligned_cols=31 Identities=10% Similarity=0.078 Sum_probs=27.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|++|.+|..+++.+. ..|.+|+.++++.
T Consensus 149 li~g~~~~~g~~~~~~~~-----~~g~~v~~~~~~~ 179 (328)
T cd08268 149 LITAASSSVGLAAIQIAN-----AAGATVIATTRTS 179 (328)
T ss_pred EEecCccHHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 589999999999999888 7899999998764
No 436
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=72.77 E-value=3.4 Score=39.73 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|| |.+|.+++.+|. ++|++|+.+.|..
T Consensus 264 vIIGa-GIaG~s~A~~La-----~~G~~V~VlE~~~ 293 (662)
T PRK01747 264 AIIGG-GIAGAALALALA-----RRGWQVTLYEADE 293 (662)
T ss_pred EEECc-cHHHHHHHHHHH-----HCCCeEEEEecCC
Confidence 37775 999999999999 8899999999974
No 437
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=72.65 E-value=3.6 Score=32.03 Aligned_cols=29 Identities=17% Similarity=-0.017 Sum_probs=26.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEec
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAW 34 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R 34 (239)
|.+|++.-+|++|+.+|. ++|.+|..+++
T Consensus 2 ~L~G~~sKvaraiA~~LC-----~rgv~V~m~~~ 30 (164)
T PF12076_consen 2 FLTGNTSKVARAIALALC-----RRGVQVVMLSK 30 (164)
T ss_pred eecccccHHHHHHHHHHH-----hcCCEEEEecH
Confidence 578999999999999999 89999988854
No 438
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=72.26 E-value=9.8 Score=36.10 Aligned_cols=59 Identities=10% Similarity=-0.166 Sum_probs=42.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF 68 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~ 68 (239)
|+|+ |.+|+-++.++. +-|++|++++.++...... -.-. ++.+|..|.+.+.+..+.++
T Consensus 27 IIGg-Gqlg~mla~aA~-----~lG~~Vi~ld~~~~apa~~-~AD~-~~v~~~~D~~~l~~~a~~~d 85 (577)
T PLN02948 27 VLGG-GQLGRMLCQAAS-----QMGIKVKVLDPLEDCPASS-VAAR-HVVGSFDDRAAVREFAKRCD 85 (577)
T ss_pred EECC-CHHHHHHHHHHH-----HCCCEEEEEeCCCCCchhh-hCce-eeeCCCCCHHHHHHHHHHCC
Confidence 6675 899999999999 8899999998865421100 0113 55688889888877777653
No 439
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=72.19 E-value=4.3 Score=36.25 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=27.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|| |..|..++-.|. +.|++|+.+-|++.
T Consensus 22 ~IvGa-G~aGl~~A~~L~-----~~G~~v~v~E~~~~ 52 (415)
T PRK07364 22 AIVGG-GIVGLTLAAALK-----DSGLRIALIEAQPA 52 (415)
T ss_pred EEECc-CHHHHHHHHHHh-----cCCCEEEEEecCCc
Confidence 47776 999999999998 89999999999864
No 440
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=72.07 E-value=4.2 Score=32.13 Aligned_cols=30 Identities=27% Similarity=0.298 Sum_probs=25.5
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| .|-||+++++.|. .-|.+|++.+|...
T Consensus 41 IiG-~G~IG~~vA~~l~-----~fG~~V~~~d~~~~ 70 (178)
T PF02826_consen 41 IIG-YGRIGRAVARRLK-----AFGMRVIGYDRSPK 70 (178)
T ss_dssp EES-TSHHHHHHHHHHH-----HTT-EEEEEESSCH
T ss_pred EEE-EcCCcCeEeeeee-----cCCceeEEecccCC
Confidence 455 6999999999999 88999999999865
No 441
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=71.90 E-value=4.2 Score=35.96 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=21.7
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcE---EEEEec
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWE---VYGSAW 34 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~---V~~l~R 34 (239)
|.||||++|+.|++.|.. ++.++ +..++-
T Consensus 10 IvGATG~vG~ell~lL~~----h~~f~v~~l~~~aS 41 (347)
T PRK06728 10 VVGATGAVGQKIIELLEK----ETKFNIAEVTLLSS 41 (347)
T ss_pred EEeCCCHHHHHHHHHHHH----CCCCCcccEEEEEC
Confidence 899999999999998872 34555 555543
No 442
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=71.89 E-value=3.8 Score=34.97 Aligned_cols=32 Identities=19% Similarity=0.057 Sum_probs=27.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+|++|.+|..+++.+. ..|.+|+++++++.
T Consensus 151 lI~g~~g~vg~~~~~~a~-----~~g~~v~~~~~~~~ 182 (326)
T cd08289 151 LVTGATGGVGSLAVSILA-----KLGYEVVASTGKAD 182 (326)
T ss_pred EEEcCCchHHHHHHHHHH-----HCCCeEEEEecCHH
Confidence 589999999999998887 78999999988754
No 443
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=71.88 E-value=3.9 Score=35.28 Aligned_cols=30 Identities=7% Similarity=-0.017 Sum_probs=26.2
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| +|.+|+++++.|. ..||+|+..+|++.
T Consensus 9 iiG-~G~~G~~lA~~l~-----~~G~~V~~~~r~~~ 38 (308)
T PRK14619 9 ILG-AGAWGSTLAGLAS-----ANGHRVRVWSRRSG 38 (308)
T ss_pred EEC-ccHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 555 6999999999999 88999999999764
No 444
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.85 E-value=4.2 Score=35.04 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=25.4
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|+| .|.+|+.++..|+ ..|++|+++.+++
T Consensus 9 vIG-aG~mG~~iA~~l~-----~~g~~V~~~d~~~ 37 (311)
T PRK06130 9 IIG-AGTMGSGIAALFA-----RKGLQVVLIDVME 37 (311)
T ss_pred EEC-CCHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 566 4999999999999 7899999999865
No 445
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.76 E-value=3.9 Score=34.91 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=26.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+|+ |.+|..++..|+ ..|++|++.+|++.
T Consensus 9 vIGa-G~mG~~iA~~la-----~~G~~V~l~d~~~~ 38 (292)
T PRK07530 9 VIGA-GQMGNGIAHVCA-----LAGYDVLLNDVSAD 38 (292)
T ss_pred EECC-cHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 6674 999999999999 88999999998753
No 446
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=71.65 E-value=4.1 Score=30.89 Aligned_cols=30 Identities=10% Similarity=0.002 Sum_probs=24.5
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+|| |-++.+|++.+. .-||+|+.++.++.
T Consensus 3 I~Ga-G~va~al~~la~-----~lg~~v~v~d~r~e 32 (136)
T PF13478_consen 3 IFGA-GHVARALARLAA-----LLGFRVTVVDPRPE 32 (136)
T ss_dssp EES--STCHHHHHHHHH-----HCTEEEEEEES-CC
T ss_pred EEeC-cHHHHHHHHHHH-----hCCCEEEEEcCCcc
Confidence 5664 999999999888 78999999988754
No 447
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=71.53 E-value=4.9 Score=35.28 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=27.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQ 38 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~ 38 (239)
+|+|| |..|..++..|. +.|++|+.+-|++..
T Consensus 3 iIvGa-G~aGl~~A~~L~-----~~G~~v~v~Er~~~~ 34 (385)
T TIGR01988 3 VIVGG-GMVGLALALALA-----RSGLKIALIEATPAE 34 (385)
T ss_pred EEECC-CHHHHHHHHHHh-----cCCCEEEEEeCCCcc
Confidence 47775 999999999998 889999999998753
No 448
>PLN02256 arogenate dehydrogenase
Probab=71.15 E-value=5.2 Score=34.66 Aligned_cols=29 Identities=7% Similarity=0.105 Sum_probs=25.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|.| .|.+|..+++.|. +.|++|++++|++
T Consensus 41 IIG-~G~mG~slA~~L~-----~~G~~V~~~d~~~ 69 (304)
T PLN02256 41 IVG-FGNFGQFLAKTFV-----KQGHTVLATSRSD 69 (304)
T ss_pred EEe-eCHHHHHHHHHHH-----hCCCEEEEEECcc
Confidence 567 6999999999998 7789999999875
No 449
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=71.14 E-value=4.3 Score=35.00 Aligned_cols=29 Identities=21% Similarity=0.123 Sum_probs=25.9
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|.| .|.+|+.++..|. ..||+|++++|++
T Consensus 6 iiG-~G~mG~~~a~~L~-----~~g~~V~~~~r~~ 34 (325)
T PRK00094 6 VLG-AGSWGTALAIVLA-----RNGHDVTLWARDP 34 (325)
T ss_pred EEC-CCHHHHHHHHHHH-----hCCCEEEEEECCH
Confidence 667 5999999999999 8899999999975
No 450
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=71.01 E-value=3.9 Score=34.43 Aligned_cols=31 Identities=13% Similarity=0.000 Sum_probs=27.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+||+|.+|..+++.+. ..|.+|+++++++
T Consensus 149 lI~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 179 (325)
T cd08253 149 LVHGGSGAVGHAAVQLAR-----WAGARVIATASSA 179 (325)
T ss_pred EEEcCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 589999999999999888 7889999998865
No 451
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=70.88 E-value=6.3 Score=28.09 Aligned_cols=30 Identities=13% Similarity=-0.122 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
||+|| |-+|..-++.|+ +.|.+|+.++...
T Consensus 11 lVvGg-G~va~~k~~~Ll-----~~gA~v~vis~~~ 40 (103)
T PF13241_consen 11 LVVGG-GPVAARKARLLL-----EAGAKVTVISPEI 40 (103)
T ss_dssp EEEEE-SHHHHHHHHHHC-----CCTBEEEEEESSE
T ss_pred EEECC-CHHHHHHHHHHH-----hCCCEEEEECCch
Confidence 57887 999999999999 8899999999873
No 452
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=70.68 E-value=5.4 Score=34.69 Aligned_cols=30 Identities=20% Similarity=0.093 Sum_probs=25.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC--cEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~ 35 (239)
.|+||+|.||++++-.|. .++ .++..++.+
T Consensus 4 ~IIGaaG~VG~~~a~~l~-----~~~~~~elvLiDi~ 35 (310)
T cd01337 4 AVLGAAGGIGQPLSLLLK-----LNPLVSELALYDIV 35 (310)
T ss_pred EEECCCCHHHHHHHHHHH-----hCCCCcEEEEEecC
Confidence 389999999999999888 555 478888876
No 453
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]
Probab=70.57 E-value=4.7 Score=35.29 Aligned_cols=31 Identities=10% Similarity=0.039 Sum_probs=25.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||.| +|+.|.-+++.|. +.|++|..+.|++.
T Consensus 5 lIVG-aGlsG~V~A~~a~-----~~gk~VLIvekR~H 35 (374)
T COG0562 5 LIVG-AGLSGAVIAEVAA-----QLGKRVLIVEKRNH 35 (374)
T ss_pred EEEC-CchhHHHHHHHHH-----HcCCEEEEEecccc
Confidence 4566 6999999999777 78999999998864
No 454
>PLN02735 carbamoyl-phosphate synthase
Probab=70.52 E-value=11 Score=38.64 Aligned_cols=68 Identities=13% Similarity=0.047 Sum_probs=41.7
Q ss_pred CeecccCh-h---------HHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhcccCc
Q 048469 1 MVIGIVSM-A---------DLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLFNE 70 (239)
Q Consensus 1 LVtGatG~-i---------G~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~~~ 70 (239)
||+|+... | |..++++|. +.|++|+++..++........-.+ .+..+-.+++.+.+.++..+
T Consensus 27 LiiGsG~~~igqa~e~d~SG~q~~kaLk-----e~G~~Vi~vd~np~t~~~~~~~aD-~~yi~p~~~e~v~~ii~~e~-- 98 (1102)
T PLN02735 27 MILGAGPIVIGQACEFDYSGTQACKALK-----EEGYEVVLINSNPATIMTDPETAD-RTYIAPMTPELVEQVIAKER-- 98 (1102)
T ss_pred EEECCCccccccceeecchHHHHHHHHH-----HcCCEEEEEeCCcccccCChhhCc-EEEeCCCCHHHHHHHHHHhC--
Confidence 57886542 3 778999999 899999999887642110001112 22234456777777766553
Q ss_pred ceEEEc
Q 048469 71 ITHVHD 76 (239)
Q Consensus 71 v~~v~~ 76 (239)
+|.|+-
T Consensus 99 ~D~Iip 104 (1102)
T PLN02735 99 PDALLP 104 (1102)
T ss_pred CCEEEE
Confidence 666653
No 455
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]
Probab=70.43 E-value=4.7 Score=36.25 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=32.7
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchh
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGN 59 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~ 59 (239)
|.| .|..|++|+..|. ++|-+|+.+-|.-... + -+.+.+.+|..
T Consensus 50 IVG-AGV~GsaLa~~L~-----kdGRrVhVIERDl~EP----d----RivGEllQPGG 93 (509)
T KOG1298|consen 50 IVG-AGVAGSALAYALA-----KDGRRVHVIERDLSEP----D----RIVGELLQPGG 93 (509)
T ss_pred EEC-CcchHHHHHHHHh-----hCCcEEEEEecccccc----h----HHHHHhcCcch
Confidence 556 5999999999999 8999999999974322 2 33466666653
No 456
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=70.34 E-value=4.3 Score=35.29 Aligned_cols=30 Identities=17% Similarity=0.032 Sum_probs=26.1
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.| +|-+|..++..|. ..||+|++..|++.
T Consensus 9 iIG-~G~mG~~ia~~L~-----~~G~~V~~~~r~~~ 38 (328)
T PRK14618 9 VLG-AGAWGTALAVLAA-----SKGVPVRLWARRPE 38 (328)
T ss_pred EEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 566 5999999999999 88999999999753
No 457
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=70.30 E-value=20 Score=29.04 Aligned_cols=62 Identities=11% Similarity=-0.011 Sum_probs=41.1
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCCCCCCCceeeEeecCCCchhHHHHHhccc-CcceEEEc
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSWFPSSAVDHYITFDATNSGNTTEKLSLLF-NEITHVHD 76 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~-~~v~~v~~ 76 (239)
|||.....+++..- . +..|+++..++... .++++ ++.+|+.+.+.+.+...... ..+|.|+.
T Consensus 61 GtG~~t~~l~~~~~-----~-~~~V~aVDi~~~~~---~~~v~-~i~~D~~~~~~~~~i~~~~~~~~~D~V~S 123 (209)
T PRK11188 61 APGGWSQYAVTQIG-----D-KGRVIACDILPMDP---IVGVD-FLQGDFRDELVLKALLERVGDSKVQVVMS 123 (209)
T ss_pred cCCHHHHHHHHHcC-----C-CceEEEEecccccC---CCCcE-EEecCCCChHHHHHHHHHhCCCCCCEEec
Confidence 67888888887654 3 34899999876322 25688 99999999876655544332 12555544
No 458
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=70.26 E-value=4 Score=36.52 Aligned_cols=63 Identities=10% Similarity=0.130 Sum_probs=46.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC--CCCCCCceeeEeecCCCch-hHHHHHhcccC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQS--WFPSSAVDHYITFDATNSG-NTTEKLSLLFN 69 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~~Dl~d~~-~~~~~l~~~~~ 69 (239)
|+.| +|||.+-+++.|.. +..-+|++.+|..... ..+...++ .+..|+.+++ .+.+.++.++.
T Consensus 6 lllg-sg~v~~p~~d~ls~----~~dv~vtva~~~~~~~~~~~~~~~~~-av~ldv~~~~~~L~~~v~~~D~ 71 (445)
T KOG0172|consen 6 LLLG-SGFVSRPVADFLSR----KKDVNVTVASRTLKDAEALVKGINIK-AVSLDVADEELALRKEVKPLDL 71 (445)
T ss_pred EEec-CccccchHHHHHhh----cCCceEEEehhhHHHHHHHhcCCCcc-ceEEEccchHHHHHhhhcccce
Confidence 3555 79999999999982 4456799988865431 11234588 9999999987 88888887753
No 459
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=70.16 E-value=4 Score=34.87 Aligned_cols=27 Identities=19% Similarity=0.107 Sum_probs=24.4
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEec
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAW 34 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R 34 (239)
|.| +|-+|..++..|. +.|++|+.++|
T Consensus 5 IiG-~G~iG~~~a~~L~-----~~g~~V~~~~r 31 (305)
T PRK12921 5 VVG-AGAVGGTFGGRLL-----EAGRDVTFLVR 31 (305)
T ss_pred EEC-CCHHHHHHHHHHH-----HCCCceEEEec
Confidence 666 5999999999999 78999999999
No 460
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional
Probab=70.09 E-value=8.2 Score=33.27 Aligned_cols=30 Identities=20% Similarity=0.158 Sum_probs=23.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC--CcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG--PWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~--g~~V~~l~R~~~ 37 (239)
||||+++.+ .+++.|. .. |++|++++.++.
T Consensus 5 Lv~g~~~~~--~~~~~l~-----~~~~g~~vi~~d~~~~ 36 (326)
T PRK12767 5 LVTSAGRRV--QLVKALK-----KSLLKGRVIGADISEL 36 (326)
T ss_pred EEecCCccH--HHHHHHH-----HhccCCEEEEECCCCc
Confidence 689997665 8999998 55 599999987753
No 461
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=69.80 E-value=4.6 Score=37.94 Aligned_cols=30 Identities=7% Similarity=-0.063 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|| |.+|..++.+|. .+|.+|..+.|..
T Consensus 10 vIIGG-Gi~G~~iA~~La-----~rG~~V~LlEk~d 39 (546)
T PRK11101 10 IIIGG-GATGAGIARDCA-----LRGLRCILVERHD 39 (546)
T ss_pred EEECc-CHHHHHHHHHHH-----HcCCeEEEEECCC
Confidence 47776 999999999999 8899999999864
No 462
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=69.79 E-value=4.2 Score=34.55 Aligned_cols=30 Identities=13% Similarity=0.096 Sum_probs=25.9
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.|+ |.+|..++..|+ ..|++|+++.+++.
T Consensus 8 VIG~-G~mG~~ia~~la-----~~g~~V~~~d~~~~ 37 (282)
T PRK05808 8 VIGA-GTMGNGIAQVCA-----VAGYDVVMVDISDA 37 (282)
T ss_pred EEcc-CHHHHHHHHHHH-----HCCCceEEEeCCHH
Confidence 5665 999999999999 78999999987653
No 463
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=69.79 E-value=4.5 Score=34.85 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=27.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|+ |.+|+.++..|. ..|.+|++.+|++.
T Consensus 156 lViG~-G~iG~~~a~~L~-----~~Ga~V~v~~r~~~ 186 (296)
T PRK08306 156 LVLGF-GRTGMTLARTLK-----ALGANVTVGARKSA 186 (296)
T ss_pred EEECC-cHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 47885 889999999999 78999999999864
No 464
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=69.71 E-value=3.8 Score=34.97 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=26.3
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| .|.+|+.+++.|. ..|++|++.+|++.
T Consensus 4 vIG-~G~mG~~iA~~l~-----~~G~~V~~~dr~~~ 33 (291)
T TIGR01505 4 FIG-LGIMGSPMSINLA-----KAGYQLHVTTIGPE 33 (291)
T ss_pred EEE-ecHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 555 6999999999999 88999999999864
No 465
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=69.67 E-value=5.7 Score=34.95 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=27.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPKQ 38 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~ 38 (239)
+|.|| |..|..++..|. +.| ++|+.+.|.+..
T Consensus 3 ~IvGa-G~aGl~~A~~L~-----~~G~~~v~v~E~~~~~ 35 (382)
T TIGR01984 3 IIVGG-GLVGLSLALALS-----RLGKIKIALIEANSPS 35 (382)
T ss_pred EEECc-cHHHHHHHHHHh-----cCCCceEEEEeCCCcc
Confidence 47775 999999999999 899 999999998643
No 466
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=69.34 E-value=3.8 Score=33.62 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=26.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
||+|++| +|..+++.+. ..|.+|+++++++
T Consensus 139 li~g~~~-~G~~~~~~a~-----~~g~~v~~~~~~~ 168 (271)
T cd05188 139 LVLGAGG-VGLLAAQLAK-----AAGARVIVTDRSD 168 (271)
T ss_pred EEECCCH-HHHHHHHHHH-----HcCCeEEEEcCCH
Confidence 5899999 9999998887 7889999998864
No 467
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=69.13 E-value=4.6 Score=34.08 Aligned_cols=32 Identities=16% Similarity=0.024 Sum_probs=27.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|++|-+|..+++.+. ..|.+|+++++++.
T Consensus 144 lv~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~~ 175 (325)
T TIGR02824 144 LIHGGASGIGTTAIQLAK-----AFGARVFTTAGSDE 175 (325)
T ss_pred EEEcCcchHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 589999999999998887 78999999888653
No 468
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=69.11 E-value=4.6 Score=34.45 Aligned_cols=28 Identities=11% Similarity=-0.080 Sum_probs=25.1
Q ss_pred ccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 5 IVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 5 atG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|.|.+|..+++.|. +.||+|++.+|++.
T Consensus 3 GlG~mG~~mA~~L~-----~~G~~V~v~dr~~~ 30 (288)
T TIGR01692 3 GLGNMGGPMAANLL-----KAGHPVRVFDLFPD 30 (288)
T ss_pred cccHhHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 47999999999999 88999999999754
No 469
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=68.61 E-value=5.2 Score=37.13 Aligned_cols=30 Identities=13% Similarity=0.011 Sum_probs=26.1
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| +|.+|+.++..|+ ..||+|++.+|++.
T Consensus 9 vIG-~G~MG~~iA~~la-----~~G~~V~v~D~~~~ 38 (495)
T PRK07531 9 CIG-GGVIGGGWAARFL-----LAGIDVAVFDPHPE 38 (495)
T ss_pred EEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 555 6999999999999 88999999998753
No 470
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=68.59 E-value=5.9 Score=27.14 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=23.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCC-CcEEEEEec
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGG-PWEVYGSAW 34 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~-g~~V~~l~R 34 (239)
+|.|+ |.+|+.++..|. .. +.+|+..+|
T Consensus 27 ~i~G~-G~~g~~~a~~l~-----~~~~~~v~v~~r 55 (86)
T cd05191 27 VVLGA-GEVGKGIAKLLA-----DEGGKKVVLCDR 55 (86)
T ss_pred EEECC-CHHHHHHHHHHH-----HcCCCEEEEEcC
Confidence 36787 999999999999 55 567888887
No 471
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=68.34 E-value=7.2 Score=32.50 Aligned_cols=70 Identities=11% Similarity=0.012 Sum_probs=46.8
Q ss_pred ChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCC-----CCCCCCceeeEeecCCCchhHHHHHhccc---CcceEEEccc
Q 048469 7 SMADLSFTEALKSPIALGGPWEVYGSAWCPKQS-----WFPSSAVDHYITFDATNSGNTTEKLSLLF---NEITHVHDPA 78 (239)
Q Consensus 7 G~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~~Dl~d~~~~~~~l~~~~---~~v~~v~~~a 78 (239)
--|++.+++.|. ++|.++......+.-. ..+..+-.+.+.||+++.+++.+.++.+. +.+|.++|+.
T Consensus 18 rSIAwGIAk~l~-----~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsI 92 (259)
T COG0623 18 RSIAWGIAKALA-----EQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSI 92 (259)
T ss_pred ccHHHHHHHHHH-----HcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEe
Confidence 358999999999 8999977665543210 00111223268999999998888877654 2467778876
Q ss_pred ccc
Q 048469 79 HSA 81 (239)
Q Consensus 79 ~yg 81 (239)
.|.
T Consensus 93 aFa 95 (259)
T COG0623 93 AFA 95 (259)
T ss_pred ccC
Confidence 554
No 472
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=68.23 E-value=4.9 Score=34.25 Aligned_cols=31 Identities=19% Similarity=-0.081 Sum_probs=27.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|+|++|.+|.++++.+. ..|.+|+.++++.
T Consensus 171 lI~g~~~~iG~~~~~~~~-----~~g~~v~~~~~~~ 201 (342)
T cd08266 171 LVHGAGSGVGSAAIQIAK-----LFGATVIATAGSE 201 (342)
T ss_pred EEECCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 589999999999999988 7899999988765
No 473
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=68.05 E-value=6 Score=34.34 Aligned_cols=29 Identities=14% Similarity=0.015 Sum_probs=25.8
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|.|| |-+|.+++..|. +.|++|+.++|++
T Consensus 5 IiGa-Ga~G~ala~~L~-----~~g~~V~l~~r~~ 33 (326)
T PRK14620 5 ILGA-GSFGTAIAIALS-----SKKISVNLWGRNH 33 (326)
T ss_pred EECc-CHHHHHHHHHHH-----HCCCeEEEEecCH
Confidence 6775 999999999999 7899999999965
No 474
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=67.81 E-value=4.7 Score=34.49 Aligned_cols=31 Identities=16% Similarity=-0.072 Sum_probs=27.3
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
||+|++|.+|..+++.+. ..|.+|+++++++
T Consensus 150 lI~g~~g~ig~~~~~~a~-----~~G~~vi~~~~~~ 180 (329)
T cd05288 150 VVSAAAGAVGSVVGQIAK-----LLGARVVGIAGSD 180 (329)
T ss_pred EEecCcchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 589999999999999888 7889999998765
No 475
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=67.78 E-value=5 Score=34.32 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=27.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||.||+|-+|..+++.+. ..|.+|+++++++.
T Consensus 144 lI~ga~g~ig~~~~~~a~-----~~g~~v~~~~~~~~ 175 (329)
T cd08250 144 LVTAAAGGTGQFAVQLAK-----LAGCHVIGTCSSDE 175 (329)
T ss_pred EEEeCccHHHHHHHHHHH-----HcCCeEEEEeCcHH
Confidence 589999999999998887 78899999887653
No 476
>PRK05442 malate dehydrogenase; Provisional
Probab=67.62 E-value=7 Score=34.25 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=24.0
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCc-------EEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPW-------EVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~-------~V~~l~R~~ 36 (239)
|+||+|.||++++-.|. ..+. ++..+++++
T Consensus 9 IiGaaG~VG~~~a~~l~-----~~~~~~~~~~~el~LiDi~~ 45 (326)
T PRK05442 9 VTGAAGQIGYSLLFRIA-----SGDMLGKDQPVILQLLEIPP 45 (326)
T ss_pred EECCCcHHHHHHHHHHH-----hhhhcCCCCccEEEEEecCC
Confidence 89999999999999887 4432 788888754
No 477
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=67.60 E-value=5.4 Score=36.85 Aligned_cols=31 Identities=13% Similarity=0.045 Sum_probs=26.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|+|+ |.+|++++..|. ..|++|+..+|+..
T Consensus 336 lIiGa-GgiG~aia~~L~-----~~G~~V~i~~R~~~ 366 (477)
T PRK09310 336 AIVGA-GGAAKAIATTLA-----RAGAELLIFNRTKA 366 (477)
T ss_pred EEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 47895 899999999999 78999998888643
No 478
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=67.60 E-value=11 Score=34.11 Aligned_cols=50 Identities=16% Similarity=0.047 Sum_probs=35.8
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCCCCC-CCCCCceeeEeecCCCc
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPKQSW-FPSSAVDHYITFDATNS 57 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~~Dl~d~ 57 (239)
|+||+|-+|.++++.|. ..|.+|++..+.+.... ....++. -+..|.+..
T Consensus 43 l~~~~~g~~~~~~~~~~-----~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~d~~~~ 93 (450)
T PRK08261 43 LVGGAGRLAEALAALLA-----GLGYDVVANNDGGLTWAAGWGDRFG-ALVFDATGI 93 (450)
T ss_pred EEccCchhHHHHHHHHh-----hCCCeeeecCccccccccCcCCccc-EEEEECCCC
Confidence 88999999999999998 88999999876544211 1224555 556776653
No 479
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=67.57 E-value=7.2 Score=32.80 Aligned_cols=32 Identities=19% Similarity=0.085 Sum_probs=26.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC----cEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP----WEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g----~~V~~l~R~~~ 37 (239)
.|+||+|.+|..++..|+ ..| .+|+.++++..
T Consensus 2 ~IIGagG~vG~~ia~~l~-----~~~~~~~~el~L~D~~~~ 37 (263)
T cd00650 2 AVIGAGGNVGPALAFGLA-----DGSVLLAIELVLYDIDEE 37 (263)
T ss_pred EEECCCChHHHHHHHHHH-----hCCCCcceEEEEEeCCcc
Confidence 389999999999999998 556 68999988653
No 480
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=67.56 E-value=6.3 Score=34.71 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=23.7
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWC 35 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~ 35 (239)
.|.||||+.|..|++.|.. ....+++..+.+
T Consensus 6 ~IvGasGYtG~EL~rlL~~----Hp~ve~~~~ss~ 36 (349)
T COG0002 6 GIVGASGYTGLELLRLLAG----HPDVELILISSR 36 (349)
T ss_pred EEEcCCCCcHHHHHHHHhc----CCCeEEEEeech
Confidence 3899999999999999983 445676655443
No 481
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=67.48 E-value=6.9 Score=34.71 Aligned_cols=31 Identities=13% Similarity=0.024 Sum_probs=26.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.|| |..|..++-.|. +.|++|..+.|.+.
T Consensus 10 ~IvGa-G~aGl~~A~~La-----~~G~~v~liE~~~~ 40 (392)
T PRK08773 10 VIVGG-GVVGAACALALA-----DAGLSVALVEGREP 40 (392)
T ss_pred EEECc-CHHHHHHHHHHh-----cCCCEEEEEeCCCC
Confidence 36665 999999999998 88999999999764
No 482
>PRK08013 oxidoreductase; Provisional
Probab=67.45 E-value=6.4 Score=35.17 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=27.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.|| |..|..++-.|. +.|++|+.+.|++.
T Consensus 7 ~IvGa-GpaGl~~A~~La-----~~G~~v~viE~~~~ 37 (400)
T PRK08013 7 VIAGG-GMVGLAVACGLQ-----GSGLRVAVLEQRVP 37 (400)
T ss_pred EEECc-CHHHHHHHHHHh-----hCCCEEEEEeCCCC
Confidence 46675 999999999998 88999999999865
No 483
>PLN02775 Probable dihydrodipicolinate reductase
Probab=67.01 E-value=19 Score=31.02 Aligned_cols=31 Identities=23% Similarity=0.144 Sum_probs=25.1
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEE-EecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYG-SAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~-l~R~~ 36 (239)
+|.||+|-.|+.+++... ..+.++++ +.+++
T Consensus 15 ~V~Ga~G~MG~~~~~av~-----~~~~~Lv~~~~~~~ 46 (286)
T PLN02775 15 MVNGCTGKMGHAVAEAAV-----SAGLQLVPVSFTGP 46 (286)
T ss_pred EEECCCChHHHHHHHHHh-----cCCCEEEEEecccc
Confidence 488999999999999998 68899665 45443
No 484
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=66.66 E-value=6.3 Score=35.16 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=26.4
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
+|.|| |..|..++-.|. +.|++|+.+.+.+
T Consensus 6 ~IVGa-G~aGl~~A~~L~-----~~G~~v~viE~~~ 35 (405)
T PRK05714 6 LIVGA-GMVGSALALALQ-----GSGLEVLLLDGGP 35 (405)
T ss_pred EEECc-cHHHHHHHHHHh-----cCCCEEEEEcCCC
Confidence 47775 999999999998 8899999999876
No 485
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=66.63 E-value=5.6 Score=33.84 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=27.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||+|++|-+|..+++.+. ..|.+|+++++++.
T Consensus 147 lI~g~~~~~g~~~~~la~-----~~g~~v~~~~~~~~ 178 (324)
T cd08244 147 LVTAAAGGLGSLLVQLAK-----AAGATVVGAAGGPA 178 (324)
T ss_pred EEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 589999999999998887 78999999987653
No 486
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=66.52 E-value=9.4 Score=35.18 Aligned_cols=31 Identities=13% Similarity=0.042 Sum_probs=24.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcE-EEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWE-VYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~-V~~l~R~~~ 37 (239)
||.|| |.||..|.+.|+ ..|++ |+.+.-...
T Consensus 16 LvVGa-GGIGCELLKnLa-----l~gf~~IhiIDlDTI 47 (603)
T KOG2013|consen 16 LVVGA-GGIGCELLKNLA-----LTGFEEIHIIDLDTI 47 (603)
T ss_pred EEEec-CcccHHHHHHHH-----HhcCCeeEEEeccce
Confidence 57786 889999999999 78886 888766543
No 487
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=66.42 E-value=7.9 Score=33.89 Aligned_cols=30 Identities=17% Similarity=0.087 Sum_probs=24.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCc-------EEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPW-------EVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~-------~V~~l~R~~ 36 (239)
|+||+|.||++++-.|. ..+. +++.++++.
T Consensus 8 IIGa~G~VG~~~a~~l~-----~~~~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 8 VTGAAGQIGYSLLFRIA-----SGELFGKDQPVVLHLLDIPP 44 (323)
T ss_pred EECCCcHHHHHHHHHHH-----hCCcccCCCccEEEEEecCC
Confidence 89999999999999998 4453 788888754
No 488
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=66.33 E-value=7.2 Score=32.60 Aligned_cols=31 Identities=19% Similarity=-0.010 Sum_probs=27.0
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.|| |..|..++.+|. +.|.+|..+.|++.
T Consensus 4 ~IiGa-G~aGl~~A~~l~-----~~g~~v~vie~~~~ 34 (295)
T TIGR02032 4 VVVGA-GPAGASAAYRLA-----DKGLRVLLLEKKSF 34 (295)
T ss_pred EEECC-CHHHHHHHHHHH-----HCCCeEEEEeccCC
Confidence 47775 999999999998 78999999998864
No 489
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=66.08 E-value=5.9 Score=33.69 Aligned_cols=32 Identities=13% Similarity=-0.027 Sum_probs=27.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||.|++|.+|..+++.+. ..|.+|+++++++.
T Consensus 151 lI~g~~g~vg~~~~~~a~-----~~g~~v~~~~~~~~ 182 (325)
T cd05280 151 LVTGATGGVGSIAVAILA-----KLGYTVVALTGKEE 182 (325)
T ss_pred EEECCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 589999999999998777 78889999988653
No 490
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=65.85 E-value=5.6 Score=36.05 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=26.4
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| .|++|..++..|. ..||+|+++.|++.
T Consensus 8 VIG-lG~~G~~~A~~La-----~~G~~V~~~D~~~~ 37 (415)
T PRK11064 8 VIG-LGYIGLPTAAAFA-----SRQKQVIGVDINQH 37 (415)
T ss_pred EEC-cchhhHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 565 6999999999999 88999999999764
No 491
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=65.63 E-value=5.6 Score=36.08 Aligned_cols=31 Identities=10% Similarity=-0.006 Sum_probs=26.5
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCC-cEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGP-WEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g-~~V~~l~R~~~ 37 (239)
+|+|+ |-+|+.+++.|. ..| .+|++++|+..
T Consensus 184 lViGa-G~iG~~~a~~L~-----~~G~~~V~v~~rs~~ 215 (417)
T TIGR01035 184 LLIGA-GEMGELVAKHLL-----RKGVGKILIANRTYE 215 (417)
T ss_pred EEECC-hHHHHHHHHHHH-----HCCCCEEEEEeCCHH
Confidence 47886 999999999998 677 68999999764
No 492
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=65.57 E-value=5.5 Score=35.92 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=26.4
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| .|.+|..++..|. ..||+|++++|++.
T Consensus 5 vIG-lG~~G~~lA~~La-----~~G~~V~~~d~~~~ 34 (411)
T TIGR03026 5 VIG-LGYVGLPLAALLA-----DLGHEVTGVDIDQE 34 (411)
T ss_pred EEC-CCchhHHHHHHHH-----hcCCeEEEEECCHH
Confidence 555 6999999999999 88999999999764
No 493
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=65.14 E-value=6.2 Score=36.80 Aligned_cols=30 Identities=13% Similarity=0.008 Sum_probs=26.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+|+ |..|+.++..|+ ..||+|+...|++.
T Consensus 12 VIGa-G~MG~gIA~~la-----~aG~~V~l~D~~~e 41 (507)
T PRK08268 12 VIGA-GAMGAGIAQVAA-----QAGHTVLLYDARAG 41 (507)
T ss_pred EECC-CHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 6776 999999999999 88999999998764
No 494
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=65.12 E-value=8.1 Score=34.14 Aligned_cols=31 Identities=32% Similarity=0.085 Sum_probs=26.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.|| |..|..++-.|. +.|++|+.+.|.+.
T Consensus 11 iIVGa-G~~Gl~~A~~L~-----~~G~~v~liE~~~~ 41 (388)
T PRK07494 11 AVIGG-GPAGLAAAIALA-----RAGASVALVAPEPP 41 (388)
T ss_pred EEECc-CHHHHHHHHHHh-----cCCCeEEEEeCCCC
Confidence 46775 999999999998 78999999998754
No 495
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=65.07 E-value=5.8 Score=34.06 Aligned_cols=30 Identities=13% Similarity=0.105 Sum_probs=26.1
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
|+| .|.+|..+++.|. +.||+|++.+|++.
T Consensus 6 ~IG-lG~mG~~mA~~l~-----~~G~~V~v~d~~~~ 35 (296)
T PRK15461 6 FIG-LGQMGSPMASNLL-----KQGHQLQVFDVNPQ 35 (296)
T ss_pred EEe-eCHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 455 7999999999999 88999999999764
No 496
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=64.59 E-value=8.6 Score=33.19 Aligned_cols=30 Identities=20% Similarity=0.092 Sum_probs=25.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCC--cEEEEEecCCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGP--WEVYGSAWCPK 37 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g--~~V~~l~R~~~ 37 (239)
|+|+ |.+|+.++..|+ ..| ++|+.++|+..
T Consensus 5 IIGa-G~vG~~~a~~l~-----~~g~~~ei~l~D~~~~ 36 (306)
T cd05291 5 IIGA-GHVGSSFAYSLV-----NQGIADELVLIDINEE 36 (306)
T ss_pred EECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCcc
Confidence 6785 999999999998 677 68999999764
No 497
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms.
Probab=64.50 E-value=6.3 Score=35.14 Aligned_cols=31 Identities=13% Similarity=-0.132 Sum_probs=25.6
Q ss_pred CeecccChhHHHHHHHhhcCCCCC-CCc-EEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALG-GPW-EVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~-~g~-~V~~l~R~~~ 37 (239)
+|+|| |.+|.+++.+|. + .|+ +|+.+.|+..
T Consensus 34 vIIGg-Gi~G~s~A~~L~-----~~~g~~~V~vle~~~~ 66 (407)
T TIGR01373 34 IIVGG-GGHGLATAYYLA-----KEHGITNVAVLEKGWL 66 (407)
T ss_pred EEECC-cHHHHHHHHHHH-----HhcCCCeEEEEEcccc
Confidence 36775 999999999998 6 486 8999999753
No 498
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=64.48 E-value=6.5 Score=33.18 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=27.8
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
||.||+|-+|..+++.+. ..|.+|+++++++.
T Consensus 147 lV~ga~g~~g~~~~~~a~-----~~g~~v~~~~~~~~ 178 (320)
T cd08243 147 LIRGGTSSVGLAALKLAK-----ALGATVTATTRSPE 178 (320)
T ss_pred EEEcCCChHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 589999999999999888 78999999887653
No 499
>PRK07236 hypothetical protein; Provisional
Probab=64.37 E-value=6.7 Score=34.76 Aligned_cols=31 Identities=29% Similarity=0.371 Sum_probs=26.9
Q ss_pred CeecccChhHHHHHHHhhcCCCCCCCcEEEEEecCCC
Q 048469 1 MVIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCPK 37 (239)
Q Consensus 1 LVtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 37 (239)
+|.|| |..|..++..|. +.|++|+.+-|.+.
T Consensus 10 iIVGa-G~aGl~~A~~L~-----~~G~~v~v~E~~~~ 40 (386)
T PRK07236 10 VVIGG-SLGGLFAALLLR-----RAGWDVDVFERSPT 40 (386)
T ss_pred EEECC-CHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 46775 999999999998 88999999998753
No 500
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=64.24 E-value=5.8 Score=34.54 Aligned_cols=29 Identities=14% Similarity=0.039 Sum_probs=25.6
Q ss_pred eecccChhHHHHHHHhhcCCCCCCCcEEEEEecCC
Q 048469 2 VIGIVSMADLSFTEALKSPIALGGPWEVYGSAWCP 36 (239)
Q Consensus 2 VtGatG~iG~~lv~~L~~~~~~~~g~~V~~l~R~~ 36 (239)
|.| +|.+|..++..|. ..||+|++++|++
T Consensus 7 IiG-~G~mG~~~A~~L~-----~~G~~V~~~~r~~ 35 (341)
T PRK08229 7 VLG-AGSIGCYLGGRLA-----AAGADVTLIGRAR 35 (341)
T ss_pred EEC-CCHHHHHHHHHHH-----hcCCcEEEEecHH
Confidence 566 6999999999999 7899999999964
Done!