Query 048471
Match_columns 183
No_of_seqs 130 out of 1059
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 17:03:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 2.3E-62 7.9E-67 423.2 17.3 183 1-183 133-316 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 4.2E-62 1.4E-66 421.9 16.6 182 1-182 137-319 (319)
3 2nsp_A Pectinesterase A; micha 100.0 3.9E-51 1.3E-55 356.2 15.1 161 1-174 155-341 (342)
4 3uw0_A Pectinesterase; right-h 100.0 6E-51 2.1E-55 357.4 15.4 159 1-173 181-364 (364)
5 3grh_A YBHC, acyl-COA thioeste 100.0 2.6E-43 8.9E-48 312.4 12.2 127 5-139 264-416 (422)
6 1xg2_A Pectinesterase 1; prote 96.0 0.03 1E-06 47.7 9.1 87 2-106 113-204 (317)
7 1gq8_A Pectinesterase; hydrola 96.0 0.031 1.1E-06 47.7 8.9 89 2-106 117-208 (319)
8 2nsp_A Pectinesterase A; micha 95.8 0.048 1.7E-06 46.9 9.5 90 3-106 136-229 (342)
9 3grh_A YBHC, acyl-COA thioeste 95.7 0.058 2E-06 47.8 9.7 89 2-106 228-330 (422)
10 3uw0_A Pectinesterase; right-h 95.5 0.073 2.5E-06 46.2 9.5 86 5-106 164-254 (364)
11 1ru4_A Pectate lyase, PEL9A; p 93.6 0.33 1.1E-05 42.5 9.0 88 3-104 133-227 (400)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=2.3e-62 Score=423.16 Aligned_cols=183 Identities=59% Similarity=1.030 Sum_probs=169.4
Q ss_pred CceeccCceeeEccEEeeeeeeEecCcceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCC
Q 048471 1 TLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSN 80 (183)
Q Consensus 1 TLy~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~ 80 (183)
|||++++||||++|+|+|+||||||+|+|+||+|+|+++.+..++.++||||+|+++.+++||||+||+|++++++.+..
T Consensus 133 TLy~~~~r~~~~~c~I~G~vDFIfG~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~ 212 (317)
T 1xg2_A 133 TLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVL 212 (317)
T ss_dssp CEEECSSEEEEESCEEEESSSCEEECCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGT
T ss_pred ceeecCccEEEEeeEEEeceeEEcCCceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccc
Confidence 89999999999999999999999999999999999999887666779999999999999999999999999988654322
Q ss_pred CcceEEEeccCCCCCcEEEEecCCCCccCCCCCCCCCCCCcccccEEEEecccCCCCCCCCccccCCcccC-CHHHHhcc
Q 048471 81 QTVQTYLGRPWKEYSRTVYMQSFMDSLINPAGWHEWSGDFALATLYYAEYNNTGPGSDTTNRVTWPGYQVI-NATDAANF 159 (183)
Q Consensus 81 ~~~~~yLGRpW~~~s~~v~~~~~l~~~I~~~GW~~w~~~~~~~~~~f~Ey~n~GpGa~~s~Rv~w~~~~~L-s~~eAa~y 159 (183)
...++||||||++++|+||++|+|+++|+|+||.+|++..+.++++|+||+|+|||+++++||+|+++++| +++||++|
T Consensus 213 ~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~ 292 (317)
T 1xg2_A 213 KEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPF 292 (317)
T ss_dssp TTSCEEEECCSSTTCEEEEESCEECTTBCTTCSCCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEEECCHHHHGGG
T ss_pred cceeEEeecccCCCceEEEEecccCCcccccccccCCCCCCcCceEEEEEcCCCCCCCcccccccccccccCCHHHHHHh
Confidence 33489999999999999999999999999999999998888889999999999999999999999987777 46999999
Q ss_pred hhhccccCCCCccCCCCCCCCCCC
Q 048471 160 TVSNFLLGDNWLPQTAVPYTGGLI 183 (183)
Q Consensus 160 t~~~~~~g~~W~p~~~~p~~~~~~ 183 (183)
+..+||+|++|+|.+++||..||.
T Consensus 293 t~~~~i~g~~W~p~~~~~~~~~~~ 316 (317)
T 1xg2_A 293 TVAKLIQGGSWLRSTGVAYVDGLY 316 (317)
T ss_dssp SHHHHSCTHHHHGGGCCCCCCSSC
T ss_pred hHHhhcCCCCCcCCCCcccccccc
Confidence 999999998999999999999984
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=4.2e-62 Score=421.86 Aligned_cols=182 Identities=58% Similarity=1.005 Sum_probs=168.2
Q ss_pred CceeccCceeeEccEEeeeeeeEecCcceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCC
Q 048471 1 TLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSN 80 (183)
Q Consensus 1 TLy~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~ 80 (183)
|||++++||||++|+|+|+||||||+|+|+||+|+|+++.+..++.++||||+|+++.+++||||+||+|++++++.+..
T Consensus 137 TLy~~~~r~~~~~c~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~ 216 (319)
T 1gq8_A 137 SLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQ 216 (319)
T ss_dssp CEEECSSEEEEESCEEEESSSCEEESCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGG
T ss_pred eeeecCccEEEEecEEEeeeeEEecCCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccc
Confidence 89999999999999999999999999999999999999887666779999999999999999999999999988653322
Q ss_pred CcceEEEeccCCCCCcEEEEecCCCCccCCCCCCCCCCCCcccccEEEEecccCCCCCCCCccccCCcccC-CHHHHhcc
Q 048471 81 QTVQTYLGRPWKEYSRTVYMQSFMDSLINPAGWHEWSGDFALATLYYAEYNNTGPGSDTTNRVTWPGYQVI-NATDAANF 159 (183)
Q Consensus 81 ~~~~~yLGRpW~~~s~~v~~~~~l~~~I~~~GW~~w~~~~~~~~~~f~Ey~n~GpGa~~s~Rv~w~~~~~L-s~~eAa~y 159 (183)
...++||||||++++|+||++|+|+++|+|+||.+|++..+.++++|+||+|+|||+++++||+|+++++| +++||++|
T Consensus 217 ~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~ 296 (319)
T 1gq8_A 217 SSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGF 296 (319)
T ss_dssp GGSCEEEECCSSTTCEEEEESCEECTTBCTTCCCCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEECCCHHHHHTT
T ss_pred cceeEEecccCCCcceEEEEeccCCCcccccccCcCCCCCCCCeeEEEEEccccCCCCcccccccccccccCCHHHHHhh
Confidence 23479999999999999999999999999999999998878899999999999999999999999987777 56999999
Q ss_pred hhhccccCCCCccCCCCCCCCCC
Q 048471 160 TVSNFLLGDNWLPQTAVPYTGGL 182 (183)
Q Consensus 160 t~~~~~~g~~W~p~~~~p~~~~~ 182 (183)
+..+||+|++|+|.++|||..||
T Consensus 297 t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 297 TPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp SHHHHSCGGGTSGGGTSCCCCCC
T ss_pred hHHhhcCCCCCcCCCCccccCCC
Confidence 99999999999999999999986
No 3
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=3.9e-51 Score=356.23 Aligned_cols=161 Identities=33% Similarity=0.581 Sum_probs=138.5
Q ss_pred CceeccCceeeEccEEeeeeeeEecCcceeeEecEEEecCCCC-C---CceEEEecCCCCCCCCceEEEeeeEEeecCCc
Q 048471 1 TLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLN-G---QFIAITAQSRTDPNQNTGTSIHNCTITASADL 76 (183)
Q Consensus 1 TLy~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~-~---~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~ 76 (183)
|||++.+||||++|+|||+||||||+|+|+||+|+|+++.+.. + ..++||||+ +++.+++||||+||+|+++++.
T Consensus 155 TLy~~~gr~~~~~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~-~~~~~~~G~vf~~c~i~~~~~~ 233 (342)
T 2nsp_A 155 TLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDS 233 (342)
T ss_dssp CEEECSSEEEEESCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEEC-CBTTCSCCEEEESCEEEESSTT
T ss_pred eEEECCCCEEEEcCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccC-CCCCCCCEEEEEcCEEecCCCC
Confidence 8999999999999999999999999999999999999986532 1 138999994 6678999999999999998753
Q ss_pred ccCCCcceEEEeccCCCCC--------------cEEEEecCCCCccCCCCCCCCCCCC--------cccccEEEEecccC
Q 048471 77 ASSNQTVQTYLGRPWKEYS--------------RTVYMQSFMDSLINPAGWHEWSGDF--------ALATLYYAEYNNTG 134 (183)
Q Consensus 77 ~~~~~~~~~yLGRpW~~~s--------------~~v~~~~~l~~~I~~~GW~~w~~~~--------~~~~~~f~Ey~n~G 134 (183)
.+ .+++||||||++++ ||||++|+|+++|+ ||.+|++.. ..++++|+||+|+|
T Consensus 234 ~~---~~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~EY~n~G 308 (342)
T 2nsp_A 234 VP---AKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFFEYKSYG 308 (342)
T ss_dssp SC---TTCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEEEESCBS
T ss_pred Cc---cccEEEEeccccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEEEEeccc
Confidence 22 35899999999998 99999999999998 999998632 23568999999999
Q ss_pred CCCCCCCccccCCcccCCHHHHhcchhhccccCCCCccCC
Q 048471 135 PGSDTTNRVTWPGYQVINATDAANFTVSNFLLGDNWLPQT 174 (183)
Q Consensus 135 pGa~~s~Rv~w~~~~~Ls~~eAa~yt~~~~~~g~~W~p~~ 174 (183)
||++++. +. ++|+++||++|+.++||+ +|+|..
T Consensus 309 pGa~~~~---~~--~~l~~~ea~~~t~~~~i~--~W~p~~ 341 (342)
T 2nsp_A 309 AGATVSK---DR--RQLTDAQAAEYTQSKVLG--DWTPTL 341 (342)
T ss_dssp TTCCCST---TS--CBCCHHHHGGGSHHHHHT--TCCCCC
T ss_pred CCCCCCC---Cc--eECCHHHHHhhhHHhhhc--cCCCCC
Confidence 9998642 22 489999999999999996 599864
No 4
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=6e-51 Score=357.38 Aligned_cols=159 Identities=31% Similarity=0.553 Sum_probs=135.8
Q ss_pred Cceec-cCceeeEccEEeeeeeeEecCcceeeEecEEEecCCCC--CCceEEEecCCCCCCCCceEEEeeeEEeecCCcc
Q 048471 1 TLYTH-SLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLN--GQFIAITAQSRTDPNQNTGTSIHNCTITASADLA 77 (183)
Q Consensus 1 TLy~~-~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~--~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~ 77 (183)
|||++ .|||||++|+|||+||||||+|+|+||+|+|+++.+.. .+.++||||+ +++.+++||||+||+|+++++++
T Consensus 181 TLy~~~~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~-~~~~~~~G~vf~~c~i~~~~~~~ 259 (364)
T 3uw0_A 181 TLYSKTGSRSYFSDCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPS-TLTTSPYGLIFINSRLTKEPGVP 259 (364)
T ss_dssp CEEECTTCEEEEESCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEEC-CCTTCSCCEEEESCEEEECTTCC
T ss_pred ceEeCCCCCEEEEcCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCC-cCCCCCcEEEEEeeEEecCCCCc
Confidence 89999 89999999999999999999999999999999986532 3459999995 56678999999999999987643
Q ss_pred cCCCcceEEEeccCCCC--------------CcEEEEecCCCCccCCCCCCCCCCCC--------cccccEEEEecccCC
Q 048471 78 SSNQTVQTYLGRPWKEY--------------SRTVYMQSFMDSLINPAGWHEWSGDF--------ALATLYYAEYNNTGP 135 (183)
Q Consensus 78 ~~~~~~~~yLGRpW~~~--------------s~~v~~~~~l~~~I~~~GW~~w~~~~--------~~~~~~f~Ey~n~Gp 135 (183)
.+++||||||+++ +||||++|+|+++| +||.+|++.. ..++++|+||+|+||
T Consensus 260 ----~~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~Ey~n~Gp 333 (364)
T 3uw0_A 260 ----ANSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFEANSQGP 333 (364)
T ss_dssp ----SSCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEEESCBST
T ss_pred ----cccEEeccccccccccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEEEeCCCC
Confidence 2478999999984 49999999999999 9999998632 124678999999999
Q ss_pred CCCCCCccccCCcccCCHHHHhcchhhccccCCCCccC
Q 048471 136 GSDTTNRVTWPGYQVINATDAANFTVSNFLLGDNWLPQ 173 (183)
Q Consensus 136 Ga~~s~Rv~w~~~~~Ls~~eAa~yt~~~~~~g~~W~p~ 173 (183)
|++++.+- ++|+++||++|+.++||. +|+|.
T Consensus 334 Ga~~~~~r-----~~ls~~ea~~~t~~~~l~--gW~P~ 364 (364)
T 3uw0_A 334 GAAINEGR-----RQLSAEQLKAFTLPMIFP--DWAVH 364 (364)
T ss_dssp TCCCSTTS-----CBCCHHHHGGGSHHHHST--TCCC-
T ss_pred CCCcCCce-----eECCHHHHhhccHHHhhc--CCCCC
Confidence 99864321 479999999999999996 59984
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=2.6e-43 Score=312.41 Aligned_cols=127 Identities=25% Similarity=0.198 Sum_probs=110.2
Q ss_pred ccCceeeEccEEeeeeeeEecCcceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCCCcce
Q 048471 5 HSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSNQTVQ 84 (183)
Q Consensus 5 ~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~ 84 (183)
+.|||||++|+|||+||||||+|+|+||+|+|+++.+...+.++|||+ |+++.+++||||+||+|++++. .+
T Consensus 264 ~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~ITA~-~t~~~~~~Gfvf~nC~ita~~~-------~~ 335 (422)
T 3grh_A 264 RQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAP-ATLSNIYYGFLAVNSRFNAFGD-------GV 335 (422)
T ss_dssp CCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEEEE-CCBTTCCCCEEEESCEEEECSS-------SC
T ss_pred ccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEEec-CCCCCCCCEEEEECCEEEeCCC-------CC
Confidence 579999999999999999999999999999999987654456899998 7778899999999999998752 48
Q ss_pred EEEeccCCCCCc----EEEEecCCCCccCC-CCCCCCCCCCc---------------------ccccEEEEecccCCCCC
Q 048471 85 TYLGRPWKEYSR----TVYMQSFMDSLINP-AGWHEWSGDFA---------------------LATLYYAEYNNTGPGSD 138 (183)
Q Consensus 85 ~yLGRpW~~~s~----~v~~~~~l~~~I~~-~GW~~w~~~~~---------------------~~~~~f~Ey~n~GpGa~ 138 (183)
+||||||+++++ |||++|+|+++|+| +||.+|....+ ....||+||+|+|+|+-
T Consensus 336 ~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~~~~~~~~~~~~~r~l~~~~~nR~~ey~n~g~g~~ 415 (422)
T 3grh_A 336 AQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSK 415 (422)
T ss_dssp BEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCCCCCEEETTTEEECCTTCTTSCEEEEESCBSGGGC
T ss_pred EEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCcccccccccccccccccCCCcchhheeEecccCCCcc
Confidence 999999999987 79999999999998 99999953210 13469999999999985
Q ss_pred C
Q 048471 139 T 139 (183)
Q Consensus 139 ~ 139 (183)
.
T Consensus 416 ~ 416 (422)
T 3grh_A 416 V 416 (422)
T ss_dssp -
T ss_pred c
Confidence 3
No 6
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.04 E-value=0.03 Score=47.73 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=60.0
Q ss_pred ceeccCceeeEccEEeeeeeeEecC-cceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCC
Q 048471 2 LYTHSLRQFYRECDIYGTVDFIFGN-AAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSN 80 (183)
Q Consensus 2 Ly~~~gr~yf~~c~I~G~vDFIfG~-g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~ 80 (183)
|+.+..|.-|++|.|.|.-|=+|-. ++.+|++|.|.-. .-+|.-.+ --||++|+|........
T Consensus 113 l~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~------vDFIfG~~--------~avf~~c~i~~~~~~~~-- 176 (317)
T 1xg2_A 113 LRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT------VDFIFGNA--------AVVFQKCQLVARKPGKY-- 176 (317)
T ss_dssp EEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEES------SSCEEECC--------EEEEESCEEEECCCSTT--
T ss_pred EEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEec------eeEEcCCc--------eEEEeeeEEEEeccCCC--
Confidence 5677788999999999999999954 6789999999832 23565321 27999999987542111
Q ss_pred CcceEE---EeccC-CCCCcEEEEecCCCC
Q 048471 81 QTVQTY---LGRPW-KEYSRTVYMQSFMDS 106 (183)
Q Consensus 81 ~~~~~y---LGRpW-~~~s~~v~~~~~l~~ 106 (183)
.+.+ =||.= .+..-.||.+|.+..
T Consensus 177 --~~~~itA~~r~~~~~~~G~vf~~c~i~~ 204 (317)
T 1xg2_A 177 --QQNMVTAQGRTDPNQATGTSIQFCNIIA 204 (317)
T ss_dssp --CCEEEEEECCCCTTSCCEEEEESCEEEE
T ss_pred --CccEEEecCcCCCCCCcEEEEECCEEec
Confidence 1222 25532 234568999999964
No 7
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.97 E-value=0.031 Score=47.71 Aligned_cols=89 Identities=19% Similarity=0.215 Sum_probs=60.2
Q ss_pred ceeccCceeeEccEEeeeeeeEecC-cceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCC
Q 048471 2 LYTHSLRQFYRECDIYGTVDFIFGN-AAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSN 80 (183)
Q Consensus 2 Ly~~~gr~yf~~c~I~G~vDFIfG~-g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~ 80 (183)
|+.+..+.-|++|.|.|.-|=++-. ++.+|++|.|.-. .-+|.-.+ --||++|+|.........
T Consensus 117 l~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~------vDFIfG~~--------~a~f~~c~i~~~~~~~~~- 181 (319)
T 1gq8_A 117 LRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGT------VDFIFGNA--------AVVLQDCDIHARRPGSGQ- 181 (319)
T ss_dssp EEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEES------SSCEEESC--------EEEEESCEEEECCCSTTC-
T ss_pred EEecCCcEEEEEeEECccceeeeecCccEEEEecEEEee------eeEEecCC--------cEEEEeeEEEEecCCCCC-
Confidence 5667788999999999999999955 6789999999832 23565321 279999999875421110
Q ss_pred CcceE-EEeccC-CCCCcEEEEecCCCC
Q 048471 81 QTVQT-YLGRPW-KEYSRTVYMQSFMDS 106 (183)
Q Consensus 81 ~~~~~-yLGRpW-~~~s~~v~~~~~l~~ 106 (183)
.+.+ -=||.= .+..-.+|.+|.+..
T Consensus 182 -~~~itA~~r~~~~~~~G~vf~~c~i~~ 208 (319)
T 1gq8_A 182 -KNMVTAQGRTDPNQNTGIVIQKSRIGA 208 (319)
T ss_dssp -CEEEEEECCCSTTCCCEEEEESCEEEE
T ss_pred -ceEEEeCCCCCCCCCceEEEECCEEec
Confidence 0111 125532 234568999999964
No 8
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.82 E-value=0.048 Score=46.88 Aligned_cols=90 Identities=14% Similarity=0.246 Sum_probs=59.4
Q ss_pred eeccCceeeEccEEeeeeeeEecC-cceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCCC
Q 048471 3 YTHSLRQFYRECDIYGTVDFIFGN-AAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSNQ 81 (183)
Q Consensus 3 y~~~gr~yf~~c~I~G~vDFIfG~-g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~~ 81 (183)
..+..|.-|++|.|.|.-|=+|-. ++.+|.+|.|. +..-+|.-.+ --||++|+|..-........
T Consensus 136 ~v~~d~~~f~~c~f~G~QDTLy~~~gr~~~~~c~I~------G~vDFIFG~a--------~a~f~~c~i~~~~~~~~~~~ 201 (342)
T 2nsp_A 136 TKSGDRAYFKDVSLVGYQATLYVSGGRSFFSDCRIS------GTVDFIFGDG--------TALFNNCDLVSRYRADVKSG 201 (342)
T ss_dssp CTTCBSEEEEEEEEECSTTCEEECSSEEEEESCEEE------ESEEEEEESS--------EEEEESCEEEECCCTTSCTT
T ss_pred eeccCcEEEEeeEEecccceEEECCCCEEEEcCEEE------eceEEEeCCc--------eEEEecCEEEEecCcccccc
Confidence 356678899999999999999954 68999999998 2234666432 27999999987532100000
Q ss_pred cceEEE---eccCCCCCcEEEEecCCCC
Q 048471 82 TVQTYL---GRPWKEYSRTVYMQSFMDS 106 (183)
Q Consensus 82 ~~~~yL---GRpW~~~s~~v~~~~~l~~ 106 (183)
....|+ +|+-.+..-.||.+|.|..
T Consensus 202 ~~~g~ItA~~~~~~~~~G~vf~~c~i~~ 229 (342)
T 2nsp_A 202 NVSGYLTAPSTNINQKYGLVITNSRVIR 229 (342)
T ss_dssp SCCEEEEEECCBTTCSCCEEEESCEEEE
T ss_pred cCceEEEccCCCCCCCCEEEEEcCEEec
Confidence 001222 3443444558999999964
No 9
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=95.69 E-value=0.058 Score=47.81 Aligned_cols=89 Identities=13% Similarity=0.150 Sum_probs=61.0
Q ss_pred ceeccCceeeEccEEeeeeeeEec-------------CcceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeee
Q 048471 2 LYTHSLRQFYRECDIYGTVDFIFG-------------NAAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNC 68 (183)
Q Consensus 2 Ly~~~gr~yf~~c~I~G~vDFIfG-------------~g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c 68 (183)
|+++.-|.-|++|.+.|.-|=+|= .++.+|.+|.|. +..-+|.=.+ --||++|
T Consensus 228 L~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIe------GtVDFIFG~a--------~AvFe~C 293 (422)
T 3grh_A 228 LRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIE------GDVDIVSGRG--------AVVFDNT 293 (422)
T ss_dssp EEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEE------ESEEEEEESS--------EEEEESC
T ss_pred EEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEe------ccccEEccCc--------eEEEEee
Confidence 567778899999999999999993 478999999997 3334676321 2799999
Q ss_pred EEeecCCcccCCCcceEEEec-cCCCCCcEEEEecCCCC
Q 048471 69 TITASADLASSNQTVQTYLGR-PWKEYSRTVYMQSFMDS 106 (183)
Q Consensus 69 ~i~~~~~~~~~~~~~~~yLGR-pW~~~s~~v~~~~~l~~ 106 (183)
+|..-..... ..+-+.-+| +=.+..-.||.+|.|..
T Consensus 294 ~I~s~~~~~~--~~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 294 EFRVVNSRTQ--QEAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EEEECCSSCS--SCCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred EEEEecCCCC--CceEEEecCCCCCCCCEEEEECCEEEe
Confidence 9987542110 011222233 22233458999999974
No 10
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.49 E-value=0.073 Score=46.21 Aligned_cols=86 Identities=16% Similarity=0.258 Sum_probs=58.4
Q ss_pred ccCceeeEccEEeeeeeeEec--CcceeeEecEEEecCCCCCCceEEEecCCCCCCCCceEEEeeeEEeecCCcccCCCc
Q 048471 5 HSLRQFYRECDIYGTVDFIFG--NAAVVLQNCNIYPRLPLNGQFIAITAQSRTDPNQNTGTSIHNCTITASADLASSNQT 82 (183)
Q Consensus 5 ~~gr~yf~~c~I~G~vDFIfG--~g~a~f~~c~i~~~~~~~~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~~~~~~~~ 82 (183)
+.-|..|++|.+.|.-|=+|= .++.+|.+|.|. +..-+|.=.+ --||++|+|......... .
T Consensus 164 ~~D~~~f~~C~f~G~QDTLy~~~~gr~yf~~c~I~------GtvDFIFG~a--------~a~f~~c~i~~~~~~~~~--~ 227 (364)
T 3uw0_A 164 NSDKARFKAVKLEGYQDTLYSKTGSRSYFSDCEIS------GHVDFIFGSG--------ITVFDNCNIVARDRSDIE--P 227 (364)
T ss_dssp TCEEEEEEEEEEECSBSCEEECTTCEEEEESCEEE------ESEEEEEESS--------EEEEESCEEEECCCSSCS--S
T ss_pred CCCeEEEEeeEEEecccceEeCCCCCEEEEcCEEE------cCCCEECCcc--------eEEEEeeEEEEeccCccc--C
Confidence 356789999999999999994 589999999998 3334676421 279999999875311000 0
Q ss_pred ceEEE---eccCCCCCcEEEEecCCCC
Q 048471 83 VQTYL---GRPWKEYSRTVYMQSFMDS 106 (183)
Q Consensus 83 ~~~yL---GRpW~~~s~~v~~~~~l~~ 106 (183)
...|+ +|+-.+..-.||.+|.+..
T Consensus 228 ~~g~ITA~~~~~~~~~G~vf~~c~i~~ 254 (364)
T 3uw0_A 228 PYGYITAPSTLTTSPYGLIFINSRLTK 254 (364)
T ss_dssp CCEEEEEECCCTTCSCCEEEESCEEEE
T ss_pred CccEEEeCCcCCCCCcEEEEEeeEEec
Confidence 11222 4543333458999999964
No 11
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=93.55 E-value=0.33 Score=42.47 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=55.6
Q ss_pred eeccCceeeEccEEeeeee---eEecCc-ceeeEecEEEecCCCC---CCceEEEecCCCCCCCCceEEEeeeEEeecCC
Q 048471 3 YTHSLRQFYRECDIYGTVD---FIFGNA-AVVLQNCNIYPRLPLN---GQFIAITAQSRTDPNQNTGTSIHNCTITASAD 75 (183)
Q Consensus 3 y~~~gr~yf~~c~I~G~vD---FIfG~g-~a~f~~c~i~~~~~~~---~~~~~ItA~~~~~~~~~~G~vf~~c~i~~~~~ 75 (183)
+....+.-+++|.|++.-| +|.+.. ..++++|+|+...... .....|.+... +..|.+|.+|++....+
T Consensus 133 ~v~gs~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~----~g~Gn~~~~~~~~~N~d 208 (400)
T 1ru4_A 133 YVIGSHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQK----QGPGNRFVGCRAWENSD 208 (400)
T ss_dssp EECSSSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTT----CCSCCEEESCEEESCSS
T ss_pred EEeCCCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEec----ccCCeEEECCEEeecCC
Confidence 4445567899999999988 344544 7899999999754311 11123444321 23799999999976542
Q ss_pred cccCCCcceEEEeccCCCCCcEEEEecCC
Q 048471 76 LASSNQTVQTYLGRPWKEYSRTVYMQSFM 104 (183)
Q Consensus 76 ~~~~~~~~~~yLGRpW~~~s~~v~~~~~l 104 (183)
...+| |+.++.|++.+|..
T Consensus 209 -------dGidl---~~~~~~v~i~nn~a 227 (400)
T 1ru4_A 209 -------DGFDL---FDSPQKVVIENSWA 227 (400)
T ss_dssp -------CSEEC---TTCCSCCEEESCEE
T ss_pred -------CcEEE---EecCCCEEEEeEEE
Confidence 13444 34556677777754
Done!