Query 048472
Match_columns 163
No_of_seqs 211 out of 735
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 17:05:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048472.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048472hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gsva1 a.23.7.1 (A:3-69) Hypo 27.0 12 0.00086 23.0 1.3 9 125-133 26-34 (67)
2 d2dlka1 g.37.1.1 (A:8-37) Zinc 22.2 15 0.0011 19.0 1.0 12 140-151 2-13 (30)
3 d2v33a1 b.1.18.4 (A:293-382) F 21.0 8.4 0.00061 25.3 -0.3 22 142-163 19-40 (90)
4 d1uhva2 c.1.8.3 (A:14-359) Bet 20.3 15 0.0011 26.8 0.9 18 27-47 314-332 (346)
5 d1ut9a2 b.1.18.2 (A:208-305) C 12.4 12 0.00087 24.3 -1.3 35 16-54 34-69 (98)
6 d2c4fl3 g.32.1.1 (L:5-44) Coag 12.3 21 0.0016 19.9 -0.0 8 26-33 4-11 (40)
7 d1lqvc_ g.32.1.1 (C:) Coagulat 11.1 25 0.0018 18.8 -0.0 8 26-33 8-15 (33)
8 d1kwga2 c.1.8.1 (A:1-393) A4 b 10.7 43 0.0032 23.6 1.3 21 28-50 356-377 (393)
9 d1xrda1 f.3.1.1 (A:1-52) Light 10.3 51 0.0037 19.2 1.2 17 6-22 20-36 (52)
10 d1iodg_ g.32.1.1 (G:) Coagulat 10.2 28 0.002 19.8 -0.0 8 26-33 8-15 (44)
No 1
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=27.03 E-value=12 Score=22.97 Aligned_cols=9 Identities=33% Similarity=0.774 Sum_probs=7.6
Q ss_pred HHHHHHHHH
Q 048472 125 VVMHLYYKA 133 (163)
Q Consensus 125 yAfN~YYq~ 133 (163)
-|||+||..
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999985
No 2
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.22 E-value=15 Score=19.01 Aligned_cols=12 Identities=50% Similarity=0.877 Sum_probs=9.6
Q ss_pred CCCCCCceEEEe
Q 048472 140 TCDFMQSGLIIS 151 (163)
Q Consensus 140 aCdF~G~A~it~ 151 (163)
.|||.|-+.|-+
T Consensus 2 ~cdf~gc~kifs 13 (30)
T d2dlka1 2 PCDFPGCGRIFS 13 (30)
T ss_dssp ECSSTTTCCEES
T ss_pred CCCCCCchhhhc
Confidence 499999888754
No 3
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=20.96 E-value=8.4 Score=25.34 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=17.2
Q ss_pred CCCCceEEEecCCCCCceeeCC
Q 048472 142 DFMQSGLIISQDPSVGECIYEP 163 (163)
Q Consensus 142 dF~G~A~it~~dpS~~~C~f~~ 163 (163)
||+|.|+|+...--.|.|..+|
T Consensus 19 DfGGvatl~Y~a~k~GkCaVHs 40 (90)
T d2v33a1 19 DFGGVLTLTYKTNKNGDCSVHS 40 (90)
T ss_dssp EEEEEEEEEEEESSCEEEEEEC
T ss_pred CcCCeEEEEEecCCCccceeEc
Confidence 8999999997766668886543
No 4
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]}
Probab=20.34 E-value=15 Score=26.78 Aligned_cols=18 Identities=11% Similarity=0.346 Sum_probs=13.7
Q ss_pred cCccccccccccccc-ccCCcc
Q 048472 27 SLKCFERSEITCNIF-ISLQPR 47 (163)
Q Consensus 27 ~~g~fersErhwGlF-~Dg~p~ 47 (163)
.+..+|+ +|||+ .||+||
T Consensus 314 ~~~~~~~---~~Gll~~dg~pK 332 (346)
T d1uhva2 314 PRSQFHG---GFGLVALNMIPK 332 (346)
T ss_dssp CCSSCSC---CSCSEETTTEEC
T ss_pred CCCcccC---CccccCCCCCCC
Confidence 4455666 99999 899776
No 5
>d1ut9a2 b.1.18.2 (A:208-305) Cellulose 1,4-beta-cellobiosidase CbhA, precatalytic domain {Clostridium thermocellum [TaxId: 1515]}
Probab=12.37 E-value=12 Score=24.27 Aligned_cols=35 Identities=11% Similarity=-0.066 Sum_probs=26.7
Q ss_pred HHhhcCcceeccCccccccccccccc-ccCCccccccccc
Q 048472 16 FLLSSTMATVLSLKCFERSEITCNIF-ISLQPRYHQQMKA 54 (163)
Q Consensus 16 ~~~~~~~~~~~~~g~fersErhwGlF-~Dg~p~Y~i~l~g 54 (163)
|-|.|++.++|.-|.-+. ||.. .-|...|.+||+.
T Consensus 34 f~l~d~~g~~V~~G~~~~----~~~~~~sg~~v~~~DFS~ 69 (98)
T d1ut9a2 34 WQLKNAAGVVVLEGYTEP----KGLDKDSQDYVHWLDFSD 69 (98)
T ss_dssp EEEECTTSCEEEEEECEE----EEEETTTTEEEEEEECTT
T ss_pred EEEEeCCCCEEEeeeeec----ccccCCcCCEEEEEEecc
Confidence 346788888888887766 7777 5577888899876
No 6
>d2c4fl3 g.32.1.1 (L:5-44) Coagulation factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=12.34 E-value=21 Score=19.89 Aligned_cols=8 Identities=38% Similarity=0.451 Sum_probs=6.2
Q ss_pred ccCccccc
Q 048472 26 LSLKCFER 33 (163)
Q Consensus 26 ~~~g~fer 33 (163)
+.|||.||
T Consensus 4 ~~~GnlER 11 (40)
T d2c4fl3 4 LRPGSLER 11 (40)
T ss_dssp GSCCCHHH
T ss_pred cccCchhh
Confidence 56888888
No 7
>d1lqvc_ g.32.1.1 (C:) Coagulation factor XIV (Protein C) {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.05 E-value=25 Score=18.78 Aligned_cols=8 Identities=38% Similarity=0.517 Sum_probs=6.6
Q ss_pred ccCccccc
Q 048472 26 LSLKCFER 33 (163)
Q Consensus 26 ~~~g~fer 33 (163)
+.|||.||
T Consensus 8 ~~~gnlER 15 (33)
T d1lqvc_ 8 LRHSSLER 15 (33)
T ss_dssp GSCCCHHH
T ss_pred hccCchHH
Confidence 56899998
No 8
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]}
Probab=10.73 E-value=43 Score=23.56 Aligned_cols=21 Identities=10% Similarity=0.009 Sum_probs=14.9
Q ss_pred Cccccccccccccc-ccCCccccc
Q 048472 28 LKCFERSEITCNIF-ISLQPRYHQ 50 (163)
Q Consensus 28 ~g~fersErhwGlF-~Dg~p~Y~i 50 (163)
++.+|+ .|+||. +|++|+-..
T Consensus 356 ~~~~E~--~~~gL~~~d~~p~~~~ 377 (393)
T d1kwga2 356 PFAQEQ--MHAGLHRPDSAPDQGF 377 (393)
T ss_dssp SSSTTT--TSCCSBCTTSCBCHHH
T ss_pred CCCccc--ceeeecCCCCCcCHHH
Confidence 444565 389999 899887544
No 9
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=10.29 E-value=51 Score=19.22 Aligned_cols=17 Identities=59% Similarity=0.655 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHhhcCc
Q 048472 6 SAFVLLLLIIFLLSSTM 22 (163)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (163)
-++++-|+|=|.|++++
T Consensus 20 fL~~LAl~IHfiLLSt~ 36 (52)
T d1xrda1 20 FLFVLALLIHFILLSTE 36 (52)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC
Confidence 46677788888887754
No 10
>d1iodg_ g.32.1.1 (G:) Coagulation factor X {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.24 E-value=28 Score=19.78 Aligned_cols=8 Identities=25% Similarity=0.322 Sum_probs=6.5
Q ss_pred ccCccccc
Q 048472 26 LSLKCFER 33 (163)
Q Consensus 26 ~~~g~fer 33 (163)
+.|||.||
T Consensus 8 ~~~GnLER 15 (44)
T d1iodg_ 8 VKQGNLER 15 (44)
T ss_dssp GSCCCHHH
T ss_pred hccCchhh
Confidence 56888888
Done!