Query 048475
Match_columns 575
No_of_seqs 200 out of 389
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 09:52:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048475.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048475hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02973 beta-fructofuranosida 100.0 7E-167 2E-171 1323.0 39.4 539 2-575 20-571 (571)
2 PLN03005 beta-fructofuranosida 100.0 4E-164 8E-169 1300.6 39.4 527 1-575 9-550 (550)
3 PF12899 Glyco_hydro_100: Alka 100.0 9E-143 2E-147 1119.4 32.4 424 107-549 1-436 (436)
4 PLN02703 beta-fructofuranosida 100.0 6E-140 1E-144 1121.8 36.7 467 78-563 107-591 (618)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 2.5E-47 5.4E-52 401.1 23.7 314 134-541 23-370 (370)
6 COG3408 GDB1 Glycogen debranch 100.0 2E-41 4.4E-46 377.7 26.6 319 124-552 270-615 (641)
7 TIGR01561 gde_arch glycogen de 100.0 2.2E-36 4.8E-41 333.8 19.9 262 136-470 288-570 (575)
8 TIGR01531 glyc_debranch glycog 100.0 1.2E-34 2.5E-39 338.1 22.2 331 137-544 1028-1462(1464)
9 PRK10137 alpha-glucosidase; Pr 100.0 4.3E-31 9.3E-36 298.5 28.4 359 102-544 307-781 (786)
10 TIGR01577 oligosac_amyl oligos 99.8 3.8E-18 8.1E-23 190.7 25.7 329 107-546 253-613 (616)
11 PLN02567 alpha,alpha-trehalase 99.7 1.1E-14 2.5E-19 161.5 28.4 354 106-554 113-552 (554)
12 KOG3625 Alpha amylase [Carbohy 99.7 1.7E-15 3.6E-20 170.6 16.9 338 137-546 1077-1516(1521)
13 PRK13271 treA trehalase; Provi 99.6 6.1E-14 1.3E-18 155.8 26.8 332 104-547 122-537 (569)
14 PRK13272 treA trehalase; Provi 99.6 3.2E-13 7E-18 149.2 26.0 333 104-548 123-538 (542)
15 PRK13270 treF trehalase; Provi 99.5 1.5E-12 3.2E-17 144.4 26.1 328 106-547 136-547 (549)
16 PF01204 Trehalase: Trehalase; 99.5 2.6E-12 5.5E-17 141.8 19.4 308 134-544 121-509 (512)
17 PF04685 DUF608: Protein of un 99.4 2.6E-13 5.7E-18 143.9 8.7 294 150-520 23-347 (365)
18 PF05592 Bac_rhamnosid: Bacter 99.3 1.7E-11 3.8E-16 133.5 15.8 195 100-332 114-323 (509)
19 COG3387 SGA1 Glucoamylase and 99.3 2.3E-10 4.9E-15 128.9 24.3 330 123-548 261-606 (612)
20 PF03200 Glyco_hydro_63: Manno 99.2 1.8E-10 3.9E-15 133.1 13.7 321 159-543 414-798 (801)
21 TIGR01535 glucan_glucosid gluc 99.2 1.1E-08 2.3E-13 116.1 26.7 349 122-551 268-637 (648)
22 COG3459 Cellobiose phosphoryla 99.1 3.8E-09 8.3E-14 121.5 18.3 267 142-496 611-914 (1056)
23 PF00723 Glyco_hydro_15: Glyco 98.6 1E-06 2.2E-11 95.5 17.9 199 108-324 3-225 (448)
24 COG1626 TreA Neutral trehalase 98.1 0.00026 5.5E-09 78.8 19.7 303 135-547 165-553 (558)
25 KOG0602 Neutral trehalase [Car 97.8 0.0029 6.2E-08 71.6 21.9 322 134-560 178-580 (600)
26 COG4354 Predicted bile acid be 97.8 0.00055 1.2E-08 76.5 16.0 142 151-305 368-532 (721)
27 KOG2161 Glucosidase I [Carbohy 97.6 0.00056 1.2E-08 78.1 12.1 209 286-541 607-842 (849)
28 PF06824 DUF1237: Protein of u 97.0 0.0093 2E-07 65.3 13.3 213 120-346 29-295 (424)
29 KOG2119 Predicted bile acid be 96.8 0.0062 1.3E-07 69.8 10.5 100 228-330 562-671 (879)
30 COG3538 Uncharacterized conser 91.9 14 0.00029 40.6 18.2 109 141-259 60-170 (434)
31 cd02892 SQCY_1 Squalene cyclas 87.8 60 0.0013 37.6 21.5 142 100-269 275-422 (634)
32 TIGR01787 squalene_cyclas squa 64.9 2.8E+02 0.0061 32.4 22.5 143 98-270 262-411 (621)
33 TIGR01507 hopene_cyclase squal 60.4 92 0.002 36.5 12.1 134 100-265 284-420 (635)
34 TIGR01507 hopene_cyclase squal 41.3 3.2E+02 0.0069 32.1 12.5 140 100-265 333-488 (635)
35 TIGR03463 osq_cycl 2,3-oxidosq 38.8 7.1E+02 0.015 29.3 23.4 141 100-270 273-423 (634)
36 PF13249 Prenyltrans_2: Prenyl 34.7 83 0.0018 26.9 5.1 33 222-260 72-104 (113)
37 PLN02993 lupeol synthase 29.9 1.1E+03 0.024 28.7 21.9 139 100-269 386-535 (763)
38 PF03632 Glyco_hydro_65m: Glyc 27.9 1.6E+02 0.0035 32.3 6.9 76 227-303 109-195 (370)
No 1
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=7.3e-167 Score=1323.04 Aligned_cols=539 Identities=83% Similarity=1.370 Sum_probs=520.3
Q ss_pred CCcccccccCcccchhhccCCcccccchHhhhccccchhhhhhccCCcccccccccchhhhhccccccccccccCCCCCC
Q 048475 2 DTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDAP 81 (575)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (575)
+++++++|+|++||+||++|||++|| |||||||||||+|++.... .+ +..++++. +++ ++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~----------~~~~~~~~-~~~-~~~~ 81 (571)
T PLN02973 20 DSLSTLDDIDDIDFAKLLEKPRPLNI--DRLRSLDERSLTELTGSPQ----LR----------NADNASRA-PDH-ADYV 81 (571)
T ss_pred cccccccccchhhHHHHhcCCcccch--hhccccchhhhhhcCcccc----cC----------Cccccccc-ccc-hhhc
Confidence 67899999999999999999999999 9999999999999965321 11 12344555 777 9999
Q ss_pred CCC--CCCCCCCCCCCCCCCCCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCCCCCcccchHHHHHHHhcCCC
Q 048475 82 FSP--GRRSGFNTPRSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGE 159 (575)
Q Consensus 82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~ 159 (575)
+|| |+|||++||++..++++|+++++|||+|++|+|+|||+|||||||.|++.+++||++||+||++||+|++|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~~~~lNY~qVFiRDfVpsaLafLl~Ge 161 (571)
T PLN02973 82 ISPSFGRRSGFNTPRSQPGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNSEEKLNYDQVFVRDFVPSALAFLMNGE 161 (571)
T ss_pred cCCCcCccccCCCCcccccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCccccccCcchhhhccHHHHHHHHHCCC
Confidence 999 999999999998899999999999999999999999999999999999878999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHh
Q 048475 160 PEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST 239 (575)
Q Consensus 160 peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~T 239 (575)
+||||+||..+++||++|+++|+||+++|+||+||||.|+|+++++.+++|||+++||||+||||++||||++++|.+.|
T Consensus 162 ~eIVrnFl~~TL~lq~~ektld~~q~g~G~mPaSfkv~~~p~~~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~T 241 (571)
T PLN02973 162 PDIVKNFLLKTLRLQSWEKKIDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKST 241 (571)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHhcccCCCCcCceeeecccccCccccccccccccccccccccchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999998788899999999999999999999999999999999999
Q ss_pred CCccccCcHHHHHHHHHHHhcccCCCcccCCCccccCCccccCCch----------HHHHHHHHHHHHhhccCCCChHHH
Q 048475 240 GDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALFFMALRCALVLLKQDDEGKEFV 309 (575)
Q Consensus 240 GD~~fl~~p~vq~al~wi~~~~~~dGf~~yptll~~Dg~~miDrrm----------aL~Y~ALr~aa~L~~~~g~~~~~a 309 (575)
||.+|++.|+||+||+||+++|+.++|++||+|+|+||+||||||| ||||+||||+.+|+.+.++.++++
T Consensus 242 gD~s~~e~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i 321 (571)
T PLN02973 242 GDSSLADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMV 321 (571)
T ss_pred cchhhhhcHHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHH
Confidence 9999999999999999999999999999999999999999999999 999999999999999987778999
Q ss_pred HHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCccccccc
Q 048475 310 ERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWF 389 (575)
Q Consensus 310 ~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f 389 (575)
++|.+|+.+|++||+++||++.+++|+|||||||||+++|+|||||+|||||+||+||||++|||++||++|++||||||
T Consensus 322 ~~i~~rl~~L~~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRff 401 (571)
T PLN02973 322 EQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWF 401 (571)
T ss_pred HHHHhhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCC
Q 048475 390 ALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSF 469 (575)
Q Consensus 390 ~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gF 469 (575)
++||+||+++||++++|+++||++|++||++|+++||||+||||+++++||++||+||||.||||||||+||+++
T Consensus 402 slGNllAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Ll----- 476 (571)
T PLN02973 402 ALGNCIAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLL----- 476 (571)
T ss_pred hhhhHHHHHhccCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHH-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhhcCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHhccC
Q 048475 470 WPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLED 548 (575)
Q Consensus 470 W~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L~~ 548 (575)
| ++ ++||+|+|++++ +++++.++.++.+++|||||||+||+|+|+|||++|||||||||+|+++|+|
T Consensus 477 w--------~~----~aA~iK~gr~~lA~ral~~ae~rl~~d~WpEyyDGktGr~iGkqar~yQTWSiAG~LlA~~~L~~ 544 (571)
T PLN02973 477 W--------LL----TAACIKTGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQTWSVAGYLVAKMMLED 544 (571)
T ss_pred H--------HH----HHHHHHcCCHHHHHHHHHHHHHHhhhcCChhhcCCCCCcCcceeccccCchHHHHHHHHHHHhhC
Confidence 6 66 999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccccccccchhhcccCCCC
Q 048475 549 PSHLGMISLEEDKQLKPLLRRSHSWTF 575 (575)
Q Consensus 549 p~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (575)
|++++||+++||+++||+++||+||||
T Consensus 545 P~~~~~~~~~e~~~~~~~~~~~~~~~~ 571 (571)
T PLN02973 545 PSHVGMVCLEEDKQMKPVMRRSNSWTC 571 (571)
T ss_pred hhhcccccccccccccchhccccccCC
Confidence 999999999999999999999999997
No 2
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=3.8e-164 Score=1300.61 Aligned_cols=527 Identities=74% Similarity=1.310 Sum_probs=509.8
Q ss_pred CCCcccccccCcccchhhccCCcccccchHhhhccccchhhhhhccCCcccccccccchhhhhccccccccccccCCCCC
Q 048475 1 MDTLCTVAECNECDFSKLSEKPRSLNMDRERQRSFDERSLSELSIGFSPRVMTRSADNANANANANANFSRLVIDHNPDA 80 (575)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (575)
.+++++++|+|++||+||++|| ++|| |||||||||||+|++.. .++ ++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~---------------------------~~~-~~~ 57 (550)
T PLN03005 9 VGSHCSLSEMDDLDLTRALDKP-RLKI--ERKRSFDERSMSELSTG---------------------------YSR-HDG 57 (550)
T ss_pred CcccccccccchhhHHHhhcCC-ccch--hhhcccchhhhhhcCcc---------------------------ccc-ccc
Confidence 3688999999999999999999 5999 99999999999999653 133 677
Q ss_pred CC-CCCCCCCCCCCCCC--CCCCCCchHHHHHHHHHHhhccccCCcceeeecCCCCc-cccCCCCCcccchHHHHHHHhc
Q 048475 81 PF-SPGRRSGFNTPRSL--IGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSE-EELNYDQVFVRDFVPSALAFLM 156 (575)
Q Consensus 81 ~~-~~~~~~~~~~~~~~--~~~~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~-~~~nY~~vFgRD~vISaL~~L~ 156 (575)
++ |||+|||++||+++ ..+++|+++++|||+|++|+|+|||+|||||||.|+++ +++||++||+||++||+|++|+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl 137 (550)
T PLN03005 58 IHDSPRGRSVLDTPLSSARNSFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLM 137 (550)
T ss_pred ccCCCCcccCCCCCcccccCCCCCCcHHHHHHHHHHhheEEECCccceeeeecCCccccccCCCceeecccHHHHHHHHH
Confidence 77 99999999999987 57999999999999999999999999999999999864 6799999999999999999999
Q ss_pred CCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHH
Q 048475 157 NGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYT 236 (575)
Q Consensus 157 ~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~ 236 (575)
+|++||||+||.++++||++|+++|+||+++|+||+||||+|+|+++++.+++|||+++||||+||||++||||++++|.
T Consensus 138 ~Ge~eIVrnFl~~~L~Lq~~ek~~d~~q~g~G~mPaSfkv~~~p~~~~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~ 217 (550)
T PLN03005 138 NGEPDIVKHFLLKTLQLQGWEKRVDRFKLGEGVMPASFKVLHDPIRETDNIVADFGESAIGRVAPVDSGFWWIILLRAYT 217 (550)
T ss_pred CCCHHHHHHHHHHHHHHhhhhhhhhcccCCCCCcCceeeecccccCCCccccccccccccccccccchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988767778899999999999999999999999999999
Q ss_pred HHhCCccccCcHHHHHHHHHHHhcccCCCcccCCCccccCCccccCCch----------HHHHHHHHHHHHhhccCCCCh
Q 048475 237 KSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALFFMALRCALVLLKQDDEGK 306 (575)
Q Consensus 237 ~~TGD~~fl~~p~vq~al~wi~~~~~~dGf~~yptll~~Dg~~miDrrm----------aL~Y~ALr~aa~L~~~~g~~~ 306 (575)
+.|||.+|++.|+||+||+||+++|+.++|++||+|+|+||+||||||| ||||+||||+.+|+.+.++.+
T Consensus 218 k~tgD~s~~e~pevQrgi~lil~lcLa~~Fd~~ptLlvpDgs~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~~~ 297 (550)
T PLN03005 218 KSTGDLTLSETPECQKGMKLILSLCLAEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGDGR 297 (550)
T ss_pred hhccchhhhhChHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999987778
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCcccc
Q 048475 307 EFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDF 386 (575)
Q Consensus 307 ~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~ 386 (575)
+++++|.+|+++|++||+++||+|.+++|+|||||||||+++|+|||||+|+|||+||+||||++|||++||++|++|||
T Consensus 298 ~~i~~i~~rl~~L~~h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~df 377 (550)
T PLN03005 298 EFIERIVKRLHALSFHMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDF 377 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchhhhhhhcccCCceeeeecccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccC
Q 048475 387 RWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAM 466 (575)
Q Consensus 387 R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~ 466 (575)
|||++||+||+++||++++|+++||++|++||++|+++||||||||++++++||++||+||||.||||||||+||+++
T Consensus 378 RffslGNllAILs~Lat~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Ll-- 455 (550)
T PLN03005 378 RWFALGNCVSILSSLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLL-- 455 (550)
T ss_pred eehhhhhHHHHHhccCCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCccceecccCCCCCCCccccCCCcchHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhhcCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHh
Q 048475 467 PSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMM 545 (575)
Q Consensus 467 ~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~ 545 (575)
| ++ ++||+|+|++++ +++++.++.++.+++|||||||+||+|+|+|||.+|||||||||+|+++
T Consensus 456 ---w--------~~----~aA~iK~gr~~lA~ral~~ae~rl~~d~WpEyydGktGr~iGkqar~~QTWSiAG~Lla~~~ 520 (550)
T PLN03005 456 ---W--------QL----TAACIKTGRPQIARRAVDLIESRLHRDCWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKML 520 (550)
T ss_pred ---H--------HH----HHHHHHcCCHHHHHHHHHHHHHHhhhcCchhhcCCCCCcccceeccccCchHHHHHHHHHHH
Confidence 6 66 999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccccccccccccchhhcccCCCC
Q 048475 546 LEDPSHLGMISLEEDKQLKPLLRRSHSWTF 575 (575)
Q Consensus 546 L~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (575)
|+||++++||+++||+++||++|||+|||.
T Consensus 521 L~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 550 (550)
T PLN03005 521 LEDPSHIGMISLEEDKLMKPVIKRSASWPQ 550 (550)
T ss_pred hhChhhccccccccccccchhhhccccccC
Confidence 999999999999999999999999999984
No 3
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=8.6e-143 Score=1119.43 Aligned_cols=424 Identities=73% Similarity=1.295 Sum_probs=417.2
Q ss_pred HHHHHHHHhhccccCCcceeeecCCCCc-cccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhcccccc
Q 048475 107 EAWDALRRSLVYFRGKPVGTIAALDSSE-EELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQL 185 (575)
Q Consensus 107 ~a~e~L~~s~v~~~~~pvGtlAa~d~~~-~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~ 185 (575)
||||+|++|+|+|+|+|||||||.|+++ +++||++||.||+||||+++|++|++|||||||..+++||++|+++|+|++
T Consensus 1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~ 80 (436)
T PF12899_consen 1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKP 80 (436)
T ss_pred ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 6999999999999999999999999987 799999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHHHHHHHHHhcccCCC
Q 048475 186 GEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEG 265 (575)
Q Consensus 186 ~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al~wi~~~~~~dG 265 (575)
++|+||+||||++++ +++.+++||||++||||+||||++|||||+++|+++|||.+|.++|+||++|++|+++|+++|
T Consensus 81 g~G~mPaSFkv~~~~--~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL~~~ 158 (436)
T PF12899_consen 81 GRGVMPASFKVLHEN--EEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDLCLADG 158 (436)
T ss_pred CCCcccceEEEecCC--CCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHcccc
Confidence 999999999999875 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccCCccccCCch----------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhh
Q 048475 266 FDTFPTLLCADGCCMIDRRM----------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLN 335 (575)
Q Consensus 266 f~~yptll~~Dg~~miDrrm----------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~ 335 (575)
|++||||+|+|||||||||| +|||+|||||.+|++..++++++++++.+|+++|++||++|||+|.+++|
T Consensus 159 Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld~~~ln 238 (436)
T PF12899_consen 159 FDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLDLKRLN 238 (436)
T ss_pred cCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 99999999999999999999 99999999999999988777899999999999999999999999999999
Q ss_pred hhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHH
Q 048475 336 DIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIE 415 (575)
Q Consensus 336 ~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~ 415 (575)
+|||||||||+++|+|||||+||+||+||+||||++|||++||++|++||||||++||+||+++||++++|+++|+++|+
T Consensus 239 ~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I~~lIe 318 (436)
T PF12899_consen 239 EIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAIMDLIE 318 (436)
T ss_pred HHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchH
Q 048475 416 SRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPF 495 (575)
Q Consensus 416 ~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~ 495 (575)
++|++|+++||+|+||||+++++||++|++||||.||||||||+||+++ | ++ ++|++|+|+++
T Consensus 319 ~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~Ll-----W--------~~----~aA~ik~gr~~ 381 (436)
T PF12899_consen 319 ERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLL-----W--------FL----TAALIKMGRPE 381 (436)
T ss_pred HHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHH-----H--------HH----HHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999 8 77 99999999999
Q ss_pred H-HHHHHHHHhhhcCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHhccCC
Q 048475 496 I-KRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDP 549 (575)
Q Consensus 496 ~-~~al~~~~~~l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L~~p 549 (575)
+ +++++.+++++.+++|||||||+||+|+|+|||.+||||||+||+|+++|+||
T Consensus 382 lA~~al~~a~~rL~~dewpEyydGktGrp~Gkqar~~QTWSaAgyLlA~~~l~~p 436 (436)
T PF12899_consen 382 LAERALEAAENRLSKDEWPEYYDGKTGRPMGKQARKYQTWSAAGYLLAKHLLENP 436 (436)
T ss_pred HHHHHHHHHHHhhcccCCcccccCCCCCcccccccccCchHHHHHHHHHHHhhCc
Confidence 9 99999999999999999999999999999999999999999999999999998
No 4
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=6.4e-140 Score=1121.79 Aligned_cols=467 Identities=58% Similarity=1.048 Sum_probs=445.7
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCchHHHHHHHHHHhhccccCCcceeeecCCCCc-cccCCCCCcccchHHHHHHHh
Q 048475 78 PDAPFSPGRRSGFNTP-RSLIGYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSE-EELNYDQVFVRDFVPSALAFL 155 (575)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~-~~~nY~~vFgRD~vISaL~~L 155 (575)
+|.+.+| .||...- ....++++|+++++||++|++|+|+|||+|+|||||.|+++ +++||++||+||++||+|++|
T Consensus 107 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafL 184 (618)
T PLN02703 107 LDEMPLP--VNGSFSSNGNAQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFL 184 (618)
T ss_pred cccccCc--ccCcCCCCCcccccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHH
Confidence 4445454 3343221 23347999999999999999999999999999999999865 679999999999999999999
Q ss_pred cCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCC-----CcccccCcCcccCCCcCCccchHHHHH
Q 048475 156 MNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRN-----TETLIADFGESAIGRVAPVDSGFWWII 230 (575)
Q Consensus 156 ~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~-----~~~~~~dfGe~~iGrv~~VDStlWfII 230 (575)
++|++||||+||.++++||++|+++|+||+++|+||+||||.++|+++ ++.+++||||++||||+||||++||||
T Consensus 185 l~Ge~eIVrnFl~~tL~lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWII 264 (618)
T PLN02703 185 LKGEYDIVRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWII 264 (618)
T ss_pred HCCCHHHHHHHHHHHHhhhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHH
Confidence 999999999999999999999999999999999999999999988765 347889999999999999999999999
Q ss_pred HHHHHHHHhCCccccCcHHHHHHHHHHHhcccCCCcccCCCccccCCccccCCch----------HHHHHHHHHHHHhhc
Q 048475 231 LLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRM----------ALFFMALRCALVLLK 300 (575)
Q Consensus 231 ll~aY~~~TGD~~fl~~p~vq~al~wi~~~~~~dGf~~yptll~~Dg~~miDrrm----------aL~Y~ALr~aa~L~~ 300 (575)
++++|.+.|||.+|++.|+||++|+.|+++|+.++|++||+|+|+||+||||||| ||||+||||+.+|+.
T Consensus 265 llraY~k~TgD~sf~e~~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~ 344 (618)
T PLN02703 265 LLRAYGKCTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLT 344 (618)
T ss_pred HHHHHHHhhccHHHhhhhhHHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeeccc
Q 048475 301 QDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVS 380 (575)
Q Consensus 301 ~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~ 380 (575)
+.++.++++++|..|+.+|++||+++||+|.+++|+|||||||||+++|+|||||+|++||+||+||||++||||+||++
T Consensus 345 ~~~~~~e~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~ 424 (618)
T PLN02703 345 PEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQ 424 (618)
T ss_pred ccchHHHHHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeec
Confidence 88777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCC
Q 048475 381 PAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSW 460 (575)
Q Consensus 381 P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvW 460 (575)
|++||||||++||+||+++||++++|+++||++|++||++|+++|||||||||+++++||++|++||||.||||||||+|
T Consensus 425 Pa~mDfRffsLGNlLAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsW 504 (618)
T PLN02703 425 PAHMDFRFFTLGNLWSIVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAW 504 (618)
T ss_pred ccccccchhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhhcCCCCCCccCCCCCCccCccCCccccchHHHH
Q 048475 461 PVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGY 539 (575)
Q Consensus 461 P~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~ 539 (575)
|+++ | ++ ++||+|+|++++ +++++.++.++.+++|||||||+||+|+|+|||++||||||||
T Consensus 505 P~Ll-----W--------f~----~aA~iK~Gr~~lA~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGy 567 (618)
T PLN02703 505 PTLL-----W--------QL----TVASIKMGRPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGY 567 (618)
T ss_pred hHHH-----H--------HH----HHHHHHcCCHHHHHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHH
Confidence 9999 6 66 999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCccccccccccccc
Q 048475 540 LVAKMMLEDPSHLGMISLEEDKQL 563 (575)
Q Consensus 540 L~a~~~L~~p~~~~~~~~~~~~~~ 563 (575)
|+|+++|+||++++||+++||+++
T Consensus 568 LlAk~~l~~P~~~~~~~~~e~~~~ 591 (618)
T PLN02703 568 LVAKLLLANPAAAKFLTSEEDSDL 591 (618)
T ss_pred HHHHHHHhChhhccccccccchhh
Confidence 999999999999999999998876
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=2.5e-47 Score=401.13 Aligned_cols=314 Identities=22% Similarity=0.292 Sum_probs=241.7
Q ss_pred ccccCCCCCcccchHHHHHHH-hcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcC
Q 048475 134 EEELNYDQVFVRDFVPSALAF-LMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFG 212 (575)
Q Consensus 134 ~~~~nY~~vFgRD~vISaL~~-L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfG 212 (575)
++-+||.+ ||||++||..++ |..|+++.+|++|.++++.| .+|+|||.+.. ...+.||
T Consensus 23 AG~PWF~~-~GRDt~Isl~gl~l~~~~~~~a~~~L~~~~~~~-----------~~G~ipn~~~~---------~~~~~Y~ 81 (370)
T PF06202_consen 23 AGYPWFST-WGRDTFISLPGLLLSPGRFEEARNILATFAGTQ-----------RHGLIPNELRD---------GEEPRYN 81 (370)
T ss_pred ccCccccc-cccHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh-----------hcCcccCcccC---------CCCCCCC
Confidence 34579999 999999997775 77799999999999999755 48999998842 2233444
Q ss_pred cccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhcc------c-CCCcccCCC----ccccCCcc
Q 048475 213 ESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSLC------L-SEGFDTFPT----LLCADGCC 279 (575)
Q Consensus 213 e~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~~------~-~dGf~~ypt----ll~~Dg~~ 279 (575)
+||+|+|||+++++|+++|||.+|++ .|.|+++|+|+.+.. + ++||+.... +.|+|...
T Consensus 82 --------s~Dat~wfl~~l~~Y~~~t~D~~~l~~~~~~i~~il~~~~~g~~~~~~~d~~~gl~~~~~~~~~~tWmD~~~ 153 (370)
T PF06202_consen 82 --------SVDATLWFLIALQEYYRWTGDYSFLRELYPAIEEILEWYADGTDFGIRVDPEDGLIYSGNGLNNQTWMDARN 153 (370)
T ss_pred --------CCccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCeeecCCCCCCCCcccccc
Confidence 69999999999999999999999998 899999999998642 3 578876443 55666321
Q ss_pred ---ccCCch-------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhh
Q 048475 280 ---MIDRRM-------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTA 349 (575)
Q Consensus 280 ---miDrrm-------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a 349 (575)
.+..|. ||||+||+.+++|++..++. .+.++.++++.|+.+|+++||++.++++..+
T Consensus 154 ~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~~--~a~~~~~~A~~lk~~F~~~FW~~~~g~~~d~----------- 220 (370)
T PF06202_consen 154 DGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGDE--LAARYREWAERLKESFEKRFWDEDRGYYADA----------- 220 (370)
T ss_pred CCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHcCCCCCEEEEE-----------
Confidence 111221 99999999999999976433 5677889999999999999998766544322
Q ss_pred hccccCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCccc
Q 048475 350 VNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKV 429 (575)
Q Consensus 350 ~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~ 429 (575)
++.- . . -+-.++|+ .+.+++|++++++++|++++++.+. ++|+++.|||+
T Consensus 221 ld~~-----~-------------~-~d~~irpN--------~~~a~~L~~~~l~~~~a~~vl~~~~---~~L~tp~GlRT 270 (370)
T PF06202_consen 221 LDGD-----K-------------E-PDDSIRPN--------QLIALSLPPGLLDPEQAKKVLDRVE---EELLTPWGLRT 270 (370)
T ss_pred ecCC-----C-------------C-CCcccccC--------chhHHhcCCccCCHHHHHHHHHHHH---HHcCCCCchhc
Confidence 1110 0 0 11134443 3456778999999999999999984 79999999999
Q ss_pred ccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCch-HH-----HHHHHHH
Q 048475 430 CYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIP-FI-----KRAIELA 503 (575)
Q Consensus 430 ~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~-~~-----~~al~~~ 503 (575)
+.| .+..|+.++.+++..++.|||||+||||++ |++ +.|++|+|.. +. +.+++..
T Consensus 271 Ls~--~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~---g~~--------------~~al~r~g~~~~~~~~~~~~ll~~~ 331 (370)
T PF06202_consen 271 LSP--SDPRYNPIYEGDQDSRDMSYHNGSVWPWDN---GIY--------------AEALLRYGFDEEEAIREAKSLLEGF 331 (370)
T ss_pred ccC--CCCCcCCCCCCccccCcccccCCCcCcCcH---HHH--------------HHHHHHhCccchHHHHHHHHHHHHH
Confidence 999 467899999889999999999999999999 445 8999999984 22 3333333
Q ss_pred Hhhh---cCCCCCCccCCCC-CCccCccCCccccchHHHHHH
Q 048475 504 ESRL---LKDSWPEYYDGKL-GRYIGKQARKFQTWSIAGYLV 541 (575)
Q Consensus 504 ~~~l---~~~~~pEyfdG~t-G~p~G~~a~~~QaWSaA~~L~ 541 (575)
..++ ..+++||.|||.. ..|.||. +||||+|++|+
T Consensus 332 ~~~~~~~~~~~lpEl~dg~~~~~p~gc~---~QAWS~a~ilr 370 (370)
T PF06202_consen 332 EEHLQEFGLGRLPELFDGDPPHYPRGCS---PQAWSVAEILR 370 (370)
T ss_pred HHHHhhccCCCcchhcCCCCCCCCCCCH---HHHHHHHHhhC
Confidence 2333 5668999999964 6777666 99999999874
No 6
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-41 Score=377.73 Aligned_cols=319 Identities=25% Similarity=0.340 Sum_probs=236.1
Q ss_pred ceeeecCCCCccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCC
Q 048475 124 VGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRN 203 (575)
Q Consensus 124 vGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~ 203 (575)
.+.+|..+ ++ .||+ +||||++||++|+|+.|+||+||++|++++++ ..+|+||+.|- -
T Consensus 270 ~~~~Ag~P-~~--~WF~-~fGRD~lIS~lgll~~g~~elArg~L~~~a~~-----------~~~GkIPhe~~--~----- 327 (641)
T COG3408 270 PGLYAGLP-IA--HWFS-PFGRDTLISALGLLLVGRFELARGTLNTLARY-----------SEPGKIPHEIL--L----- 327 (641)
T ss_pred cceEecCC-cc--hhcc-ccchHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----------ccCCCCcchhh--h-----
Confidence 44454442 22 6999 99999999999998889999999999999964 48899998761 0
Q ss_pred CcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhcccCCCcccCCC--------cc
Q 048475 204 TETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSLCLSEGFDTFPT--------LL 273 (575)
Q Consensus 204 ~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~~~~dGf~~ypt--------ll 273 (575)
....++ +|| +||+|+|||+++.+|+++|||.+|++ +|.++.+++||.+..+.+ |+.|.. ..
T Consensus 328 ~~~~~~-----~Y~---tvD~t~~~i~~~~~y~~~t~d~~~i~e~~~~v~~a~d~~~~~~~~~-~~~~~~~l~~~~~~~t 398 (641)
T COG3408 328 SIPGEP-----YYN---TVDATPLFIYLLGAYLKYTGDTEFIRELWPSVGAALDWILKGFDFG-FDTYGDGLLEGGSNQT 398 (641)
T ss_pred cCCCcc-----eec---cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcCCcc-ceecCcccccCCCCCC
Confidence 012233 444 69999999999999999999999998 899999999999875443 444322 33
Q ss_pred ccCCc---cccCCch-------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhcccc
Q 048475 274 CADGC---CMIDRRM-------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTE 343 (575)
Q Consensus 274 ~~Dg~---~miDrrm-------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~te 343 (575)
++|+. +.+++|. +|||.|++++..++..++ ..+.++++.+.+..+++.|++.||++ ..+++++
T Consensus 399 W~Ds~~~~~~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~-~~~~~~~~~~~a~~l~~~F~~~fw~~-~~f~dl~----- 471 (641)
T COG3408 399 WMDSGDDIFAVTPRAGKPVAINALQYYALKAALRLANLLG-DEEDAARLEKIARRLKESFEAKFWNP-TGFYDLA----- 471 (641)
T ss_pred CeecCCccccccCCCCCceeHHHHHHHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHhhCc-cchHhhh-----
Confidence 44543 3445532 898888888888888775 22335567777777889999999998 4455553
Q ss_pred chhhhhhccccCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhc
Q 048475 344 EYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVG 423 (575)
Q Consensus 344 ey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~ 423 (575)
. .|.-.|+++ .+.+.+++ +++||++++.+ .|+++++ ++|++
T Consensus 472 ------~-------------------------~~~~~~~r~--~~~~a~~l--~~~gi~~~~~~-~~~~l~e---~~llt 512 (641)
T COG3408 472 ------L-------------------------DDKDVPIRP--NFSNAIHL--LYTGIVDPERA-VIIRLAE---EDLLT 512 (641)
T ss_pred ------c-------------------------cCCCcccCc--cceecccc--cccccCchHHH-HHHHHHH---HhccC
Confidence 1 111124433 22343443 68899888776 6666664 79999
Q ss_pred cCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHHHHHHHHH
Q 048475 424 EMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELA 503 (575)
Q Consensus 424 ~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~~~al~~~ 503 (575)
+.|||+++| .||.++|+.||||+||||++| +| +.|+.|+|..+. ++++.+
T Consensus 513 p~GlRTLS~------------~dp~Y~p~yYH~GtVWP~~~g-------------if----v~g~~r~G~~~~-~~~~~~ 562 (641)
T COG3408 513 PWGLRTLSP------------DDPRYNPMYYHNGTVWPHDTG-------------IF----VLGLRRYGLKDI-QALELF 562 (641)
T ss_pred CccccccCC------------CCCCcCCCcccCCCcccchHH-------------HH----HHHHHHcCcccH-HHHHHH
Confidence 999998887 378999999999999999995 56 899999997774 455655
Q ss_pred Hhhh---cCCCCCCccCCCCCC-ccCccCCccccchHHHHHH--HHHhcc-CCCcc
Q 048475 504 ESRL---LKDSWPEYYDGKLGR-YIGKQARKFQTWSIAGYLV--AKMMLE-DPSHL 552 (575)
Q Consensus 504 ~~~l---~~~~~pEyfdG~tG~-p~G~~a~~~QaWSaA~~L~--a~~~L~-~p~~~ 552 (575)
...+ .-++.||.|||..+. |.||. +||||+|.+|+ ++.+|. .|++-
T Consensus 563 ~~~~~~a~~~~~pE~f~g~~~~~P~gc~---~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 563 DGLFSSASPGRIPELFDGDSPNRPKGCY---PQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred HHHhhhcccCCCcccccccCCCCCCCcc---hhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 5555 344789999998866 88776 99999999776 555665 55543
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=100.00 E-value=2.2e-36 Score=333.79 Aligned_cols=262 Identities=19% Similarity=0.199 Sum_probs=198.3
Q ss_pred ccCCCCCcccchHHHHHHH-hcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcc
Q 048475 136 ELNYDQVFVRDFVPSALAF-LMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGES 214 (575)
Q Consensus 136 ~~nY~~vFgRD~vISaL~~-L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~ 214 (575)
=.||.. ||||++||..++ |..|+++.||++|+++++.+ ..|+|||.|. ..+.++.||
T Consensus 288 ypwF~~-WGRDt~Isl~Gl~l~tgr~~~A~~iL~~fa~~~-----------~~GliPN~~~--------~~g~~p~Yn-- 345 (575)
T TIGR01561 288 YHWFDD-WGRDSFISLEGLLLIDKQFDEAKEAILKFANLC-----------KRGLIPNNFI--------AFGGDPIYN-- 345 (575)
T ss_pred Cchhcc-chhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHh-----------HCCCCCCccC--------CCCCCccCC--
Confidence 368876 999999999997 66899999999999999644 6899999883 223334444
Q ss_pred cCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhc------ccCCCcccC-CCccccCCc---cccC
Q 048475 215 AIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSL------CLSEGFDTF-PTLLCADGC---CMID 282 (575)
Q Consensus 215 ~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~------~~~dGf~~y-ptll~~Dg~---~miD 282 (575)
+||||||||+++++|+++|||.++++ +|.++..|+++.+. .+.||++.. ..++|+|.. ..+.
T Consensus 346 ------tvDAtLWfi~al~~Y~~~tgD~~~l~~l~p~l~~ii~~y~~G~~~~i~~d~dGLi~~g~~lTWMDa~~g~~~~t 419 (575)
T TIGR01561 346 ------GVDASLWAIHAIDKTFAYSQDFLFIRDVVDKVLDIIDNYCAGNDFAIGMDNDLIFHKGAPLTWMDAKVDERAVT 419 (575)
T ss_pred ------CchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCcEEEECCCccEeCCCCCCCCCCCCCCccCC
Confidence 69999999999999999999999996 89988888887763 244566532 235566652 1122
Q ss_pred Cch-------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccC
Q 048475 283 RRM-------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNV 355 (575)
Q Consensus 283 rrm-------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni 355 (575)
.|. ||||+||+.+++|++..++. +..+.+.++.|+..|+++||++..+. +|+ .++.. .
T Consensus 420 PR~G~~VEInALwYnAL~~~a~la~~~g~~---a~~y~~~A~~lk~~F~~~FW~~~~g~--l~D---------~v~~d-~ 484 (575)
T TIGR01561 420 PRAGAACEINALWYNALKTAEFLGNELGED---AESLEEKAAGVAKNFAEKFINPDGNC--LFD---------LIHQD-E 484 (575)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHhcCCCCCCe--eEE---------EEecC-C
Confidence 221 99999999999999988643 34567777778999999999986542 221 12110 0
Q ss_pred CCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHH-HHHHHHHHHHHhHHhhhccCCcccccCCc
Q 048475 356 IPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEE-QSNAIMDLIESRWEELVGEMPIKVCYPAI 434 (575)
Q Consensus 356 ~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~e-qa~~I~~~i~~~w~~l~~~~plr~~~Pp~ 434 (575)
..+.++| -.+||++. ++ ++|.+++++++ ++++|++++. ++|++++|||++.|
T Consensus 485 ~~~~~~d--------------~s~RPNql----~A----~sL~~~ll~~~~~~~~vl~~v~---~~Lltp~GlRTLsp-- 537 (575)
T TIGR01561 485 AGNQVKD--------------KAIRPNQI----FA----ISLPFPIIDDESIAKAILDLIE---KDLLRPFGLKSLSR-- 537 (575)
T ss_pred CCCcccc--------------cccCCCce----eH----hhCCCCCCCHHHHHHHHHHHHH---hhccCCcccccCCC--
Confidence 0111122 25667663 11 34568999999 9999998875 79999999999999
Q ss_pred cCCCceeeeCCCCCCCCcccccCCCCcccccCCCCC
Q 048475 435 ESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFW 470 (575)
Q Consensus 435 ~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW 470 (575)
.+..|+.+|.+++..++.+||||+||||++ |++
T Consensus 538 ~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~---G~y 570 (575)
T TIGR01561 538 DDPLYKGQYKGDALSRDTAYHNGSLPPWLH---GAL 570 (575)
T ss_pred CCCCcCCCCCCCccccCCcCcCCCcCccch---hhH
Confidence 578999999999999999999999999999 667
No 8
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=1.2e-34 Score=338.08 Aligned_cols=331 Identities=16% Similarity=0.227 Sum_probs=237.0
Q ss_pred cCCC----CCcccchHHHHHHH-hcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCc
Q 048475 137 LNYD----QVFVRDFVPSALAF-LMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADF 211 (575)
Q Consensus 137 ~nY~----~vFgRD~vISaL~~-L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~df 211 (575)
+||+ .+||||++||..|+ |.+|+++.||++|+++++ ....|+|||.|. ++..+.|
T Consensus 1028 PwF~tg~mr~WGRDTfISLrGLlL~tGR~~eAk~ii~~fa~-----------~lr~GLIPNll~---------~G~~prY 1087 (1464)
T TIGR01531 1028 PHFSVGYMRCWGRDTFIALRGMLLTTGRFDEARAIILAFAG-----------TLRHGLIPNLLD---------EGINPRY 1087 (1464)
T ss_pred CccccCcccccchhheeecCcceeccCCHHHHHHHHHHHHH-----------HHHcCCCCCCCC---------CCCcccc
Confidence 4665 89999999999995 888999999999999995 357899999872 2344556
Q ss_pred CcccCCCcCCccchHHHHHHHHHHHHHhCCc-cccC------------------------cHHHHHHHHHHHhc------
Q 048475 212 GESAIGRVAPVDSGFWWIILLRAYTKSTGDS-SLAE------------------------LPECQKGMRLILSL------ 260 (575)
Q Consensus 212 Ge~~iGrv~~VDStlWfIIll~aY~~~TGD~-~fl~------------------------~p~vq~al~wi~~~------ 260 (575)
+ ++||++|||.+++.|++.++|- ++++ .+.||.+|+++.+.
T Consensus 1088 N--------t~DA~lWfi~AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~~G~~fRE~ 1159 (1464)
T TIGR01531 1088 N--------CRDAAWFWLQCIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHFQGIQFRER 1159 (1464)
T ss_pred c--------CccHHHHHHHHHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHcCCccccc
Confidence 5 6999999999999999999994 4311 45778888887732
Q ss_pred --------------------cc-CCCccc----CCCccccCC----------ccccCCch-------HHHHHHHHHHHHh
Q 048475 261 --------------------CL-SEGFDT----FPTLLCADG----------CCMIDRRM-------ALFFMALRCALVL 298 (575)
Q Consensus 261 --------------------~~-~dGf~~----yptll~~Dg----------~~miDrrm-------aL~Y~ALr~aa~L 298 (575)
.+ ++||+. +..++|||- -..+..|- ||||+||+.+.+|
T Consensus 1160 NAGp~iD~~M~deGfn~~I~vD~~~GLI~gGn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEInaLwynAL~~~~~l 1239 (1464)
T TIGR01531 1160 NAGPQIDRVMTDEGFNVTIGVDWETGFIYGGNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIVGLLKSALRFLIEL 1239 (1464)
T ss_pred cccccchhhhccccccceEEEcCCCCcEecCCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHHHHHHHHHHHHHHH
Confidence 12 355552 233566661 11222222 9999999999999
Q ss_pred hccC-----CCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCc
Q 048475 299 LKQD-----DEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGG 373 (575)
Q Consensus 299 ~~~~-----g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~gg 373 (575)
.+.. |.... ...+.+.+..++..|++.||++.. -..+|+. -...+|+..||.|..+ ...+
T Consensus 1240 ~~~~~~~~~g~~~~-~~~~~~wa~~ik~~Fe~~F~~~~~-~~~lyDv-----~~~~vnrrgIykD~~~--------s~~~ 1304 (1464)
T TIGR01531 1240 KEKGVFKRSGVETQ-KWSYIEWNQKIQDNFEKRFFVDES-QDADYDV-----AKLGVNRRGIYKDSYG--------STKP 1304 (1464)
T ss_pred HHhcCcCcCCcccc-hhhHHHHHHHHHHHHhhhcCCCcc-cCccccc-----cchhhccccccccccC--------CCCC
Confidence 9864 32211 112444445567899999999432 1122321 1345788888887642 1234
Q ss_pred eeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCc-
Q 048475 374 YFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRW- 452 (575)
Q Consensus 374 Yl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~- 452 (575)
|-+-.+||++. ++ +++...+.+++++.++++.+ ++|++|+|||+|.| .|.+|+.+|.++...++.
T Consensus 1305 ~~D~qlRPN~~----iA----~sla~~l~~~~~a~~~L~~v----~~LltP~GlRTLdP--~D~~Y~g~Y~g~~dsrD~~ 1370 (1464)
T TIGR01531 1305 WTDYQLRPNFA----IA----MTVAPELFVPEKAWKALTIA----EVLLGPLGMKTLDP--SDWNYRGYYNNGEDSDDFA 1370 (1464)
T ss_pred CCCcccCCCce----EE----EeCCcccCCHHHHHHHHHHH----HHhccCCccccCCC--CCcCCCCccCCchhhcccc
Confidence 44557888853 33 35678899999999999999 36999999999999 578999999888888887
Q ss_pred -----ccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCch----HH-------HHHHHHHHhhhc---CCCCC
Q 048475 453 -----SYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIP----FI-------KRAIELAESRLL---KDSWP 513 (575)
Q Consensus 453 -----SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~----~~-------~~al~~~~~~l~---~~~~p 513 (575)
+||||++|||++ ||+ ..|++|.+.. .. .+.+.....++. -+++|
T Consensus 1371 t~kg~aYHqG~eW~Wll---G~f--------------l~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g~l~ 1433 (1464)
T TIGR01531 1371 TAKGRNYHQGPEWVWPI---GYF--------------LRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWRGLP 1433 (1464)
T ss_pred ccccccccCCCcCccch---hHH--------------HHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999 777 7888887533 11 222333334443 34699
Q ss_pred CccCCC-CCCccCccCCccccchHHHHHHHHH
Q 048475 514 EYYDGK-LGRYIGKQARKFQTWSIAGYLVAKM 544 (575)
Q Consensus 514 EyfdG~-tG~p~G~~a~~~QaWSaA~~L~a~~ 544 (575)
|.|||. ...+-||. .||||+|++|.+..
T Consensus 1434 El~dgdgp~~~~gc~---aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1434 ELTNKDGEYCNDSCP---TQAWSVACLLELLY 1462 (1464)
T ss_pred cccCCCCCCCCCCCH---HHHHHHHHHHHHHh
Confidence 999995 46677776 99999999998743
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=100.00 E-value=4.3e-31 Score=298.52 Aligned_cols=359 Identities=13% Similarity=0.085 Sum_probs=261.2
Q ss_pred CchHHHHHHHHHHhhccccCCcceeeec--CCCCccccCCCC--CcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhh
Q 048475 102 HPMVGEAWDALRRSLVYFRGKPVGTIAA--LDSSEEELNYDQ--VFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWE 177 (575)
Q Consensus 102 ~~~~~~a~e~L~~s~v~~~~~pvGtlAa--~d~~~~~~nY~~--vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e 177 (575)
..+..+|.+.|+.+. + .+.|.+.- .-|+++..||.. .|+||+.+.|++++.. +||+|++.|+++++.|.++
T Consensus 307 ~~l~~kA~~~L~~Nw---r-~~~g~~~~~~t~Ps~gl~Wf~~~~~W~WDS~~~A~~la~f-dpelA~~~lr~Lf~~Q~~~ 381 (786)
T PRK10137 307 TRVAVKAMETLNGNW---R-SPAGAVKFNTVTPSVTARWFSGNQTWPWDTWKQAYAMAHF-NPDVAKENIRAVFSWQIQP 381 (786)
T ss_pred HHHHHHHHHHHHHhc---c-ccccccccCceEeCCCCCCCCCCCccchHHHHHHHHHhhc-CHHHHHHHHHHHHHhhccc
Confidence 356667777777776 1 12222110 113455689999 9999999999998876 9999999999999999988
Q ss_pred hhccccc-cCCCCCCCcccccccccCCCcc--cccCcCcccCCCcCCccc-hHHHHHHHHHHHHHhCCccccC--cHHHH
Q 048475 178 KKIDRFQ-LGEGVMPASFKVLHDPIRNTET--LIADFGESAIGRVAPVDS-GFWWIILLRAYTKSTGDSSLAE--LPECQ 251 (575)
Q Consensus 178 ~~ld~~~-~~~G~mP~sfkv~h~~~~~~~~--~~~dfGe~~iGrv~~VDS-tlWfIIll~aY~~~TGD~~fl~--~p~vq 251 (575)
. |+++ -.+|+||+.+ .|++ +.+. .....++ ..+ -+++.+++++|+++|||.+|++ +|++.
T Consensus 382 ~--d~~r~~~~G~Iph~v--f~~~--~p~R~g~~~~~ne--------~~tqPPL~a~av~~vy~~t~d~~fl~~lyPkL~ 447 (786)
T PRK10137 382 D--DSVRPQDVGFVPDLI--AYNL--SPERGGDGGNWNE--------RNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLV 447 (786)
T ss_pred c--CCCCcCCCCeeeEEe--ccCC--CcccccccccccC--------CCcCcCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7 5777 4789999843 3432 1110 0112221 222 2999999999999999999998 89999
Q ss_pred HHHHHHHhccc--CCCcccCCCc---------------------------------------------------cccCCc
Q 048475 252 KGMRLILSLCL--SEGFDTFPTL---------------------------------------------------LCADGC 278 (575)
Q Consensus 252 ~al~wi~~~~~--~dGf~~yptl---------------------------------------------------l~~Dg~ 278 (575)
+..+|+.+.+| .+||++|..- -+-||+
T Consensus 448 a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~~~~~~~~G~~n~~~~~~~~~~~~~~~~~~~~~~WESGm 527 (786)
T PRK10137 448 AYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGR 527 (786)
T ss_pred HHHHHHHhcCCCCCCceeEeeccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCC
Confidence 99999999975 5689997421 133443
Q ss_pred c---c-------------------------------cCCc-----h--------HHHHHHHHHHHHhhccCCCChHHHHH
Q 048475 279 C---M-------------------------------IDRR-----M--------ALFFMALRCALVLLKQDDEGKEFVER 311 (575)
Q Consensus 279 ~---m-------------------------------iDrr-----m--------aL~Y~ALr~aa~L~~~~g~~~~~a~~ 311 (575)
+ . -|++ + +|+|.+.+.+++|++.+|.. +.+++
T Consensus 528 DNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~~~p~~~e~VDLNsyLy~a~~~LA~LAe~LG~~-e~A~~ 606 (786)
T PRK10137 528 DDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKP-EEAKR 606 (786)
T ss_pred CCccccccccccccchhhhccccccceeeeehhcccCCCCccCCCCcCCCHHHHHHHHHHHHHHHHHHHHhCCh-HHHHH
Confidence 3 0 1222 2 99999999999999999654 55778
Q ss_pred HHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCccccccccc
Q 048475 312 IVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFAL 391 (575)
Q Consensus 312 i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~l 391 (575)
+.+++..|+..|++.||.+..+++.=|+..++.. .. .+..+|+. .+.++.
T Consensus 607 ~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~~------------------------~~----~~~g~~i~--~~~~~~ 656 (786)
T PRK10137 607 YRQLAQQLADYINTCMFDETTGFYYDVRIEDKPL------------------------AN----GCAGKPIV--ERGKGP 656 (786)
T ss_pred HHHHHHHHHHHHHHHccCCcCCeEEEEecCcccc------------------------cc----cccCccee--eeccCc
Confidence 9999999999999999988876553221100000 00 01122332 245677
Q ss_pred chhHHHhcCCCCHHHHHHHHHHHHHhHHhhh-ccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCC
Q 048475 392 GNCIAILSSLATEEQSNAIMDLIESRWEELV-GEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFW 470 (575)
Q Consensus 392 GN~lALlsGla~~eqa~~I~~~i~~~w~~l~-~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW 470 (575)
+++++|++|+++++|+++|++.+.. ++.+ +++|++++. ..+|.+.|..||||+|||+++ |
T Consensus 657 agf~PLwaGia~~eqA~~VV~~L~~--p~~F~t~~GipTlS------------~s~p~ydp~~YWRGpVWpp~N-----~ 717 (786)
T PRK10137 657 EGWSPLFNGAATQANADAVVKVMLD--PKEFNTFVPLGTAA------------LTNPAFGADIYWRGRVWVDQF-----Y 717 (786)
T ss_pred cchhhccCCCCCHHHHHHHHHHhcC--hhhcCCCCCccCcC------------CCccccCCCCCCCCCcCHhHH-----H
Confidence 8889999999999999999999975 4444 344665444 447889999999999999999 8
Q ss_pred ccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHH----hhhcCCCCCCccCCCCCCccCccCCccccchHHHHHHHHH
Q 048475 471 PADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAE----SRLLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKM 544 (575)
Q Consensus 471 ~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~----~~l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~ 544 (575)
++ +.||.++|..++ +++.+... .....+.+-|+||..||++.|.. .++||+|.+|+++.
T Consensus 718 --------Li----~~GL~rYG~~e~A~~La~~ll~~a~~l~~tG~~~E~YDp~TGeg~Ga~---~FSWTAAvlLml~~ 781 (786)
T PRK10137 718 --------FG----LKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NFSWSAAHLYMLYN 781 (786)
T ss_pred --------HH----HHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCCcccCCC---CCChHHHHHHHHHH
Confidence 99 999999999887 55543322 24467889999999999999887 77999999887764
No 10
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.81 E-value=3.8e-18 Score=190.72 Aligned_cols=329 Identities=19% Similarity=0.231 Sum_probs=208.0
Q ss_pred HHHHHHHHhhcccc---CCc-ceeeecCCCCc-cccC--CCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhh
Q 048475 107 EAWDALRRSLVYFR---GKP-VGTIAALDSSE-EELN--YDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKK 179 (575)
Q Consensus 107 ~a~e~L~~s~v~~~---~~p-vGtlAa~d~~~-~~~n--Y~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ 179 (575)
+-|+++++|++..+ ..+ -++|||...+. ...| |.-+|.||++.++++++..|.++.||.+|.++++.|.
T Consensus 253 ~~~~~~~~Sll~Lk~~~~~~~GaiiAs~s~~~~~~~~~~Y~y~W~RD~~~~a~Al~~~G~~~~a~~~l~~l~~~q~---- 328 (616)
T TIGR01577 253 KIYSLYRRSLAVLRLLTDGEYGSMIAAPEFDEDFVRCGGYAYCWGRDASYIATALDRAGYHDRVDRFFRWAMQTQS---- 328 (616)
T ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEcCCCCcccccCCCCceeccccHHHHHHHHHHCCCHHHHHHHHHHHHHhhC----
Confidence 55677777754332 122 35677765331 1223 9999999999999999999999999999999998774
Q ss_pred ccccccCCCCCCCcccccccccCCCccccc-CcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHH
Q 048475 180 IDRFQLGEGVMPASFKVLHDPIRNTETLIA-DFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRL 256 (575)
Q Consensus 180 ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~-dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~w 256 (575)
..|..|..+.+ . ....+ +.+ .-.|.+-..|.++++|++.|||.+|++ +|.|++++++
T Consensus 329 ------~~G~~~~~~~~-d------G~~~~~~~~-------~Q~D~~g~~l~al~~y~~~t~d~~~~~~~~~~v~~a~~f 388 (616)
T TIGR01577 329 ------RDGSWQQRYYL-N------GRLAPLQWG-------LQIDETGSILWAMDQHYRLTNDRAFLEEIWESVQKAAQY 388 (616)
T ss_pred ------cCCCcceEEec-C------CCCCCCCCC-------ccccchhHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 45655554421 0 01111 111 126766666679999999999999997 8999999999
Q ss_pred HHhcccCCCcccCCC-ccccC--CccccCCchHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhh
Q 048475 257 ILSLCLSEGFDTFPT-LLCAD--GCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQ 333 (575)
Q Consensus 257 i~~~~~~dGf~~ypt-ll~~D--g~~miDrrmaL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~ 333 (575)
+.+..+. ++-. |. -++.+ |..... .+++|.||++|++|++..|.. +.++++.+.+..++..|+++||.+..+
T Consensus 389 l~~~~~~-~l~~-~~~~lWEer~G~~~~t--~a~~~aAL~~aa~lA~~lGd~-~~a~~~~~~Ad~ik~~i~~~~w~~~~g 463 (616)
T TIGR01577 389 LILFIDP-ETPL-PCRDLWEEREGVFTYT--ASAVYGGLDAAAAVADKLGEK-RLAQNWKKAAEFIKRAVEERFWLPERQ 463 (616)
T ss_pred HHHhccC-CCCC-CCCccceecCCccCcc--HHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9985432 2111 11 01110 211111 199999999999999999654 567889999999999999999976543
Q ss_pred hhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCcccccccccchhH--HHhcCCCCHHHHHHH-
Q 048475 334 LNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCI--AILSSLATEEQSNAI- 410 (575)
Q Consensus 334 l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~l--ALlsGla~~eqa~~I- 410 (575)
.+ ...+.+...+...++ -++ ++.+|+.+++..+.+
T Consensus 464 ~F----------------------------------------~~~~~~~~~~~~vDa--SlL~l~~~~g~l~~~Dpr~v~ 501 (616)
T TIGR01577 464 VF----------------------------------------AKGIKLMVLDKTIDI--SILGISVPFNLIAPDDERMVK 501 (616)
T ss_pred EE----------------------------------------EEeecCCCCCCcccH--HHHhHHHhcCCCCCCChHHHH
Confidence 21 111111000111121 133 345898887765444
Q ss_pred -HHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHH
Q 048475 411 -MDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSY 489 (575)
Q Consensus 411 -~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~ 489 (575)
++.|++ +|.. | . ..||. +|..-.|+.|+.|... .|| + +.+++
T Consensus 502 Tv~~I~~---~L~~--------~-~-~ggi~-------RY~~D~y~~g~~w~i~----T~w---------l----a~~~~ 544 (616)
T TIGR01577 502 MAEAIEK---HLTS--------P-I-VGGIK-------RYENDPYVGGNPWILT----TLW---------L----SQLYI 544 (616)
T ss_pred HHHHHHH---Hhcc--------c-C-CCeee-------CCCCCCCCCCCcHHHH----HHH---------H----HHHHH
Confidence 677753 4531 2 1 12222 1222256667655443 457 2 57778
Q ss_pred hcCchH-------------H-HHHHHHHHhhh-cCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHhc
Q 048475 490 KFKIPF-------------I-KRAIELAESRL-LKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMML 546 (575)
Q Consensus 490 k~G~~~-------------~-~~al~~~~~~l-~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L 546 (575)
+.|+.+ . +++++-+..+- ..+-+||=+|..||+|.|-. +|+||-|+++.+-..|
T Consensus 545 ~~g~~~~~~~~~~~~~~~~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g~~---Pl~wSHa~~i~a~~~l 613 (616)
T TIGR01577 545 KQGRILKALNHNGADIYLQKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAWAV---PLGWSHAMFLLTVLDL 613 (616)
T ss_pred HhcccccccccchhhhHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCCCCcC---CcccchHHHHHHHHHH
Confidence 888765 2 33333333332 44569999999999999876 9999999988776554
No 11
>PLN02567 alpha,alpha-trehalase
Probab=99.69 E-value=1.1e-14 Score=161.51 Aligned_cols=354 Identities=15% Similarity=0.097 Sum_probs=233.8
Q ss_pred HHHHHHHHHhhcc-c-cCCcceeeecCCCC--ccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhcc
Q 048475 106 GEAWDALRRSLVY-F-RGKPVGTIAALDSS--EEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKID 181 (575)
Q Consensus 106 ~~a~e~L~~s~v~-~-~~~pvGtlAa~d~~--~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld 181 (575)
..-|..|-|.+.. . +...-+++-.+.+. ...-.|..+|.=|+--.++|+|..|..++||+.+..++.+|
T Consensus 113 ~~lW~~L~R~~~~~v~~~~~~~sli~lp~p~iVPGgRFrE~yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~~~i------- 185 (554)
T PLN02567 113 HSLWKNLARKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYWVIRGLLASKMYETAKGVVENLLYLV------- 185 (554)
T ss_pred HHHHHHhccccCcccccCCCcCCcccCCCCeEccCCCcCccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH-------
Confidence 4556666665511 0 11123444444442 45668999999999999999999999999999999999876
Q ss_pred ccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHh
Q 048475 182 RFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILS 259 (575)
Q Consensus 182 ~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~ 259 (575)
...|.|||.-.+ . |.|| ---|.+...+..|++.|||.+|++ .|.+++=.+|-.+
T Consensus 186 ---~~~GfIPNg~R~-------------Y----yl~R----SQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~ 241 (554)
T PLN02567 186 ---DTYGFVPNGARA-------------Y----YTNR----SQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTS 241 (554)
T ss_pred ---HHcCcCCCCCcc-------------c----ccCC----CCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 267999986542 2 3454 344899999999999999999997 6888888777664
Q ss_pred c------ccCCC----cccCC----------------------C---------cc---ccCCcc-----ccC--------
Q 048475 260 L------CLSEG----FDTFP----------------------T---------LL---CADGCC-----MID-------- 282 (575)
Q Consensus 260 ~------~~~dG----f~~yp----------------------t---------ll---~~Dg~~-----miD-------- 282 (575)
. .++.| +-.|- + .+ +--|.+ +.|
T Consensus 242 ~~~~v~i~~~~g~~~~L~rY~~~~~~PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~ 321 (554)
T PLN02567 242 GRHTVTIRDANGVVHVLSRYYAMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLR 321 (554)
T ss_pred CCcceeeecCCCCcCCCcccccCCCCCCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccc
Confidence 2 11112 21120 0 00 011111 111
Q ss_pred -Cc---h---HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccC
Q 048475 283 -RR---M---ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNV 355 (575)
Q Consensus 283 -rr---m---aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni 355 (575)
.. + ++.|.+-+.+++|++.+|.. +.++++.+++..++..|++.+|.+..+++.=|...+.+-.+
T Consensus 322 t~~i~pVDLNa~L~~~e~~LA~la~~lG~~-~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~~-------- 392 (554)
T PLN02567 322 TTSILPVDLNAFLLKMELDIAFFAKLLGDK-ATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGATC-------- 392 (554)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHhcCcccCeEEeeccccccccc--------
Confidence 01 1 89999999999999999644 55677999999999999999999887754333211111000
Q ss_pred CCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHH--HHHHHHHHHHHhHHhhhccCCcccccCC
Q 048475 356 IPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEE--QSNAIMDLIESRWEELVGEMPIKVCYPA 433 (575)
Q Consensus 356 ~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~e--qa~~I~~~i~~~w~~l~~~~plr~~~Pp 433 (575)
..+ |. +.+.. ..+.+.++|+++|++|+++++ ++.++++.+.. ..+..+.|+.+
T Consensus 393 --~~~-------------~~---~~~~~-~~~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~--~~l~~pgGipt---- 447 (554)
T PLN02567 393 --QES-------------YT---WDAEN-QNTNVYASNFVPLWCGVVPPGDAKVEKVVESLKS--SGLVLPAGIAT---- 447 (554)
T ss_pred --ccc-------------cc---ccccc-cccCccHHHHHHHHcCCCChhhHHHHHHHHHHHh--ccCccCCcccC----
Confidence 000 00 01111 113456789999999999986 57888888864 34555555532
Q ss_pred ccCCCceeeeCCCCCCCCcccccCC-CCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHH--------
Q 048475 434 IESHDWRIITGCDPKNTRWSYHNGG-SWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELA-------- 503 (575)
Q Consensus 434 ~~~~~Wr~~t~~dpkn~P~SYHNGg-vWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~-------- 503 (575)
..+.+..||+|+ +||.++ | ++ +.||.++|..+. +.+.+++
T Consensus 448 -------------sl~~sg~qWdgPn~W~pl~-----~--------l~----i~GL~~yG~~ea~~lA~~la~rwl~~~~ 497 (554)
T PLN02567 448 -------------SLRNTGQQWDFPNAWAPLQ-----H--------MI----VEGLAASGSKEGKALAEDIARRWLRSNY 497 (554)
T ss_pred -------------CCCCccccCCCCCcCHhHH-----H--------HH----HHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 124456899999 999999 9 88 999999999873 2222322
Q ss_pred HhhhcCCCCCCccCCCCCCccCc----cCCccccchHHHHHHHHHhccCCCcccc
Q 048475 504 ESRLLKDSWPEYYDGKLGRYIGK----QARKFQTWSIAGYLVAKMMLEDPSHLGM 554 (575)
Q Consensus 504 ~~~l~~~~~pEyfdG~tG~p~G~----~a~~~QaWSaA~~L~a~~~L~~p~~~~~ 554 (575)
......+.+.|+||..+|...|. .....+.||+|.+|.+-.....|.+..+
T Consensus 498 ~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~~~~~ 552 (554)
T PLN02567 498 VAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPEDKKL 552 (554)
T ss_pred HHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcccCCC
Confidence 22335778999999887443332 2234678999998877766666665443
No 12
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.7e-15 Score=170.64 Aligned_cols=338 Identities=20% Similarity=0.279 Sum_probs=210.6
Q ss_pred cCCCCCcccchHHHHHHH-hcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCccc
Q 048475 137 LNYDQVFVRDFVPSALAF-LMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESA 215 (575)
Q Consensus 137 ~nY~~vFgRD~vISaL~~-L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~ 215 (575)
.+|-++||||++|+.-++ |.+|++..||+++..+++ ....|+|||-. +++..+.|+
T Consensus 1077 vg~mRcWGRDtFIaLrG~ll~TGRy~EAr~iIlaFa~-----------tlrHGLIPNLL---------d~G~~~RyN--- 1133 (1521)
T KOG3625|consen 1077 VGIMRCWGRDTFIALRGILLITGRYVEARNIILAFAG-----------TLRHGLIPNLL---------DEGIYARYN--- 1133 (1521)
T ss_pred hhhhhhcccceeeecccceEeecchHHHHHHHHHHHH-----------Hhhccccchhh---------hcccccccc---
Confidence 589999999999999996 777999999999999985 36789999954 355566665
Q ss_pred CCCcCCccchHHHHHHHHHHHHHhC----------------CccccC---------cHHHHHHHHHHHhc----------
Q 048475 216 IGRVAPVDSGFWWIILLRAYTKSTG----------------DSSLAE---------LPECQKGMRLILSL---------- 260 (575)
Q Consensus 216 iGrv~~VDStlWfIIll~aY~~~TG----------------D~~fl~---------~p~vq~al~wi~~~---------- 260 (575)
-=||+.||+.++..|++.-- |.+-+. ...||.||+-..+.
T Consensus 1134 -----cRDA~W~wl~~Iq~Yve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~qGiqfRErnAGp 1208 (1521)
T KOG3625|consen 1134 -----CRDAVWWWLQCIQDYVEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQGIQFRERNAGP 1208 (1521)
T ss_pred -----chHHHHHHHHHHHHHHHhCCChhhhhhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhccccchhccCCc
Confidence 48999999999999998532 222121 23455555444321
Q ss_pred -----ccCCCcccC-----CCcc--------ccCCccccCCc--h------------------HHHHHHHHHHHHhhccC
Q 048475 261 -----CLSEGFDTF-----PTLL--------CADGCCMIDRR--M------------------ALFFMALRCALVLLKQD 302 (575)
Q Consensus 261 -----~~~dGf~~y-----ptll--------~~Dg~~miDrr--m------------------aL~Y~ALr~aa~L~~~~ 302 (575)
.-+.||..- .|.+ |+.|++-|... . +|-|.|||.+.+|.++.
T Consensus 1209 qiD~~M~DeGFnv~~gV~~~TGfv~GGn~~NCGTWMDKMGeSerAgnkG~PaTPRDGsAVEi~GL~~salrfl~elkek~ 1288 (1521)
T KOG3625|consen 1209 QIDRNMKDEGFNVTAGVDEETGFVYGGNRFNCGTWMDKMGESERAGNKGIPATPRDGSAVEIVGLSKSALRFLLELKEKN 1288 (1521)
T ss_pred ccchhhhccCcceeeccccccceeecCCccccchhhhhcccchhccCCCCCCCCCCCceeehhhhHHHHHHHHHHHHhcC
Confidence 112355311 1211 34443322211 0 99999999999999861
Q ss_pred ------------CCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccC
Q 048475 303 ------------DEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPI 370 (575)
Q Consensus 303 ------------g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~ 370 (575)
|.+..+ . ..+..+.++..|++.|.+++..... .+=+..-+||..||+|+. ..
T Consensus 1289 ifpy~~Ve~k~~g~~~k~-s-~~eW~qkiqdNFeK~ffV~ed~s~~------~~~~~~~vnkr~IykDsy--------ga 1352 (1521)
T KOG3625|consen 1289 IFPYHGVEVKRHGKAIKW-S-YDEWNQKIQDNFEKLFFVSEDPSDL------NEKHPNLVNKRGIYKDSY--------GA 1352 (1521)
T ss_pred CccccceEEeccccccee-c-HHHHHHHHHhhhhheecccCCcchh------hhhcccccchhheecccc--------cC
Confidence 111111 1 2233334667889999997654211 122345689999999874 22
Q ss_pred CCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCC-
Q 048475 371 RGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKN- 449 (575)
Q Consensus 371 ~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn- 449 (575)
..+|.+=.+||+. +=.+.+.-.|-+++.|-+.++..+ +.|+||.+||++-| .|=.||.+|..+-.+
T Consensus 1353 t~~~tDyQLR~NF--------~IamtVAPeL~~pe~A~kAle~Ae---kvLlGPlGMkTlDP--~D~nYr~yYdN~~Ds~ 1419 (1521)
T KOG3625|consen 1353 TSPWTDYQLRPNF--------TIAMTVAPELFTPEKAWKALEIAE---KVLLGPLGMKTLDP--DDWNYRGYYDNALDSD 1419 (1521)
T ss_pred CCCccceeccCCc--------eeEEEechhhcChHHHHHHHHHHH---HHhcCcccccccCh--hhcccccccCCCcccc
Confidence 2233444444442 222334556778999999998886 58999999999999 333447777332222
Q ss_pred -----CCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHHHHHH-------HHHHhhhcC--C-CCCC
Q 048475 450 -----TRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAI-------ELAESRLLK--D-SWPE 514 (575)
Q Consensus 450 -----~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~~~al-------~~~~~~l~~--~-~~pE 514 (575)
.-+-||+|+-|-|+. ||+ ++-.+ .=..|+|-.....++ ..+..++.. + ++||
T Consensus 1420 d~~takG~NYHQGPEWlw~~---Gyf-----LrArl-----~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S~WrgLpE 1486 (1521)
T KOG3625|consen 1420 DYNTAKGFNYHQGPEWLWPI---GYF-----LRARL-----YFSRKMGPETTAYTIVQVKNRLSRHYKHLERSPWRGLPE 1486 (1521)
T ss_pred chhhhccccccCCCceeehh---HHH-----HHHHH-----HHHhhcCCchHHHHHHHHHHHHHHHHHHHhhccccCchh
Confidence 235799999999999 666 11111 111344522221121 222234432 2 4788
Q ss_pred ccCCCCCCccCccCCccccchHHHHHHHHHhc
Q 048475 515 YYDGKLGRYIGKQARKFQTWSIAGYLVAKMML 546 (575)
Q Consensus 515 yfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L 546 (575)
.=. +.|++.+- +|.-||||+|..|-+..-|
T Consensus 1487 LTN-~ngeyC~d-Sc~tQAWSvacile~~ydL 1516 (1521)
T KOG3625|consen 1487 LTN-ENGEYCPD-SCETQAWSVACILETLYDL 1516 (1521)
T ss_pred hcc-CCcCcccc-cchHhHHHHHHHHHHHHHH
Confidence 754 35777654 7899999999987665444
No 13
>PRK13271 treA trehalase; Provisional
Probab=99.64 E-value=6.1e-14 Score=155.82 Aligned_cols=332 Identities=14% Similarity=0.158 Sum_probs=224.5
Q ss_pred hHHHHHHHHHHhhccccCCcceeeecCCC--CccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhcc
Q 048475 104 MVGEAWDALRRSLVYFRGKPVGTIAALDS--SEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKID 181 (575)
Q Consensus 104 ~~~~a~e~L~~s~v~~~~~pvGtlAa~d~--~~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld 181 (575)
-+..-|..|-|.... ...-+++--..+ +...-.|.+++.=|+--.++|+|.+|..++||+.+.-++.+-
T Consensus 122 ~i~~lW~~L~R~~~~--~~~~~sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i------- 192 (569)
T PRK13271 122 HIDGLWPVLTRSTEN--TEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEI------- 192 (569)
T ss_pred HHHHHHHHhcCcCCC--CCCCCceecCCCCeEecCCCcchhhhhHHHHHHHhhHhcCCHHHHHHHHHHHHHHH-------
Confidence 455667777666611 112344444444 245668999999999999999999999999999999988532
Q ss_pred ccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHh
Q 048475 182 RFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILS 259 (575)
Q Consensus 182 ~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~ 259 (575)
..-|.|||.-++ . |.+| ---|.|...+..|++.||| ++++ .|.+++=.++-.+
T Consensus 193 ---~~yG~IPNg~R~-------------Y----Yl~R----SQPP~l~~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~Wm~ 247 (569)
T PRK13271 193 ---DTWGHIPNGNRS-------------Y----YLSR----SQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWME 247 (569)
T ss_pred ---HHhCcCcCCchh-------------h----cccC----CCChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHhC
Confidence 367999997653 2 3455 2237788888999999998 4654 4666665553332
Q ss_pred c--------------ccCCCc--ccCC------C-------c------------------c--ccCCc-----cccCC--
Q 048475 260 L--------------CLSEGF--DTFP------T-------L------------------L--CADGC-----CMIDR-- 283 (575)
Q Consensus 260 ~--------------~~~dGf--~~yp------t-------l------------------l--~~Dg~-----~miDr-- 283 (575)
. ...+|+ -.|- . + - +-.|- ++.|.
T Consensus 248 ~~~~~~~~~~~~r~v~~~~~~~L~rY~~~~~~PRpEsy~eD~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~ 327 (569)
T PRK13271 248 GVENLQPGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQ 327 (569)
T ss_pred CCcccCccccccceEEeCCCCcccccccCCCCCCCCcHHHHHHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCCcc
Confidence 1 011232 1120 0 0 0 01111 12121
Q ss_pred -------ch------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhh
Q 048475 284 -------RM------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAV 350 (575)
Q Consensus 284 -------rm------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~ 350 (575)
.+ +|+|.+.+.++++++.+|.. +.++.+.++++.++..|+++||.+..+.+ |
T Consensus 328 l~~i~t~~IiPVDLNALLy~ae~~LA~la~~lGd~-~~A~~y~~~A~~rr~AI~~~LWnee~G~f--~------------ 392 (569)
T PRK13271 328 LNTIRTTSIVPVDLNALMFKMEKILARASKAAGDN-AMANQYETLANARQKAIEKYLWNDKEGWY--A------------ 392 (569)
T ss_pred ccccccccccCchHHHHHHHHHHHHHHHHHHhCCh-hhHHHHHHHHHHHHHHHHHhcccCCCCEE--E------------
Confidence 11 99999999999999999644 55677899999999999999997765422 1
Q ss_pred ccccCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccc
Q 048475 351 NKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVC 430 (575)
Q Consensus 351 nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~ 430 (575)
+=++.-.... ..+++.|+++|++|+++++|+++|++.+.+ .++.+.++.+.
T Consensus 393 -------------------------DYDl~~~~~r-~~~saa~f~PLwag~a~~~qA~~Vv~~l~~---~Ll~pgGLpTt 443 (569)
T PRK13271 393 -------------------------DYDLKSHKVR-NQLTAAALFPLYVNAAAKDRANKVAAATKT---HLLQPGGLNTT 443 (569)
T ss_pred -------------------------EEECCCCCEe-echhHHHHHhhhcCCCCHHHHHHHHHHHHH---hcCCCCCccCC
Confidence 1111111111 135778899999999999999999999863 56767777654
Q ss_pred cCCccCCCceeeeCCCCCCCCcccccCCC-CcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHh---
Q 048475 431 YPAIESHDWRIITGCDPKNTRWSYHNGGS-WPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAES--- 505 (575)
Q Consensus 431 ~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgv-WP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~--- 505 (575)
.| .+..||+|++ ||-++ | ++ +.||.++|..++ +++......
T Consensus 444 ~~-----------------~SgqQWD~PngWaPlq-----~--------ii----ieGL~~yG~~~lA~~la~rwl~~~~ 489 (569)
T PRK13271 444 SV-----------------KSGQQWDAPNGWAPLQ-----W--------VA----TEGLQNYGQKEVAMDVTWRFLTNVQ 489 (569)
T ss_pred CC-----------------CCCCCCcCcccCHhHH-----H--------HH----HHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 43 2358999999 99999 9 88 999999999887 555332222
Q ss_pred -hh-cCCCCCCccCC-CCCCccCc---cCCccccchHHHHHHHHHhcc
Q 048475 506 -RL-LKDSWPEYYDG-KLGRYIGK---QARKFQTWSIAGYLVAKMMLE 547 (575)
Q Consensus 506 -~l-~~~~~pEyfdG-~tG~p~G~---~a~~~QaWSaA~~L~a~~~L~ 547 (575)
.. ..+.+.|+||. .+|.+.|. .....+.||.|.+|-+-..+.
T Consensus 490 ~~~~~~g~m~EKYd~~~~G~~gGGGeY~~q~GFGWTNgV~L~lL~~~~ 537 (569)
T PRK13271 490 HTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC 537 (569)
T ss_pred HHhcccCceEEeeCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHHHhcC
Confidence 22 46789999998 57766542 245689999999886665544
No 14
>PRK13272 treA trehalase; Provisional
Probab=99.59 E-value=3.2e-13 Score=149.23 Aligned_cols=333 Identities=12% Similarity=0.143 Sum_probs=221.5
Q ss_pred hHHHHHHHHHHhhccccCCcceeeecCCC--CccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhcc
Q 048475 104 MVGEAWDALRRSLVYFRGKPVGTIAALDS--SEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKID 181 (575)
Q Consensus 104 ~~~~a~e~L~~s~v~~~~~pvGtlAa~d~--~~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld 181 (575)
-+..-|..|-|.... ...-+++--..+ +...-.|..++.=|+--.++|+|.+|..++||+.+.-++.+-
T Consensus 123 ~i~~lW~~L~R~~~~--~~~~~Sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i------- 193 (542)
T PRK13272 123 HIDALWPKLVRSQEQ--VPAHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKSGQTTLSRQMLDNFAYLI------- 193 (542)
T ss_pred HHHHHHHHhccccCC--CCCcCccccCCCCeeecCCCccchhhhHHHHHHHhhhhcCcHHHHHHHHHHHHHHH-------
Confidence 366677777776621 112345444444 245668999999999999999999999999999999988532
Q ss_pred ccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC-cHHHHHHHHHHHhc
Q 048475 182 RFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE-LPECQKGMRLILSL 260 (575)
Q Consensus 182 ~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~-~p~vq~al~wi~~~ 260 (575)
..-|.|||.-++ . |.+| ---|.|.-.+..|++.|||..+.+ .|.+++=.++-.+.
T Consensus 194 ---~~yGfIPNG~R~-------------Y----Yl~R----SQPP~l~~Mv~~~~~~t~d~~~~~~lp~l~kEy~~Wm~~ 249 (542)
T PRK13272 194 ---DTYGHIPNGNRT-------------Y----YLSR----SQPPFFSYMVELQAGVEGDAAYQRYLPQLQKEYAYWMQG 249 (542)
T ss_pred ---HHcCcCcCCchh-------------c----cccC----CCchhHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCC
Confidence 367999997653 2 3455 223888899999999999987744 46666555533321
Q ss_pred c--------------cCCCc--ccCC------C-------------------------cc--ccCCc-----cccCC---
Q 048475 261 C--------------LSEGF--DTFP------T-------------------------LL--CADGC-----CMIDR--- 283 (575)
Q Consensus 261 ~--------------~~dGf--~~yp------t-------------------------ll--~~Dg~-----~miDr--- 283 (575)
. ..+|. -.|- . +- +..|- ++.|+
T Consensus 250 ~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsy~eD~~~a~~~~~~~~~~~Y~~l~a~aESGWDfSsRw~~~~~~L 329 (542)
T PRK13272 250 SDDLQPGQAARHVVRLADGSLLNRYWDERDTPRPEAWLHDTRTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLADGKTL 329 (542)
T ss_pred CCCCCCccccceeEecCCCcchhhhcCCCCCCCChHHHHHHHHhcCcccCcHHHHHHHHHHHHhcCCCchhhhccccccc
Confidence 1 12332 1120 0 00 00111 11111
Q ss_pred ------ch------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhc
Q 048475 284 ------RM------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVN 351 (575)
Q Consensus 284 ------rm------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~n 351 (575)
.+ ++.|.+-+..+++.+.+|.. +.++++.++++..+..|++.+|.+ .+++
T Consensus 330 ~~i~t~~IvpVDLNalL~~~e~~LA~~~~~lG~~-~~a~~~~~~A~~r~~aI~~~lWde-~G~~---------------- 391 (542)
T PRK13272 330 ASIRTTAIVPVDLNSLLYHLERTLAQACASSGLA-ACSQDYAALAQQRKQAIDAHLWNP-AGYY---------------- 391 (542)
T ss_pred cccCcccccCccHHHHHHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHhccCc-CceE----------------
Confidence 11 99999999999999998643 556778999999999999999975 4322
Q ss_pred cccCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCccccc
Q 048475 352 KFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCY 431 (575)
Q Consensus 352 kfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~ 431 (575)
++=+++-++.. ..++++|+++|++|+++++|++++++.+.. .+..+.++.+..
T Consensus 392 -----------------------~DYD~~~~~~~-~~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~~l~~gGlpTt~ 444 (542)
T PRK13272 392 -----------------------ADYDWQTRTLS-EQVTAAALYPLFAGLASDDRAKRTADSVRA---QLLRPGGLATTA 444 (542)
T ss_pred -----------------------EeeccCCCCcc-ccccHHHHHHHHcCCCCHHHHHHHHHHHHH---hccCCCCcCCCC
Confidence 11122222111 136789999999999999999999998864 344455553332
Q ss_pred CCccCCCceeeeCCCCCCCCcccccCC-CCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhh--
Q 048475 432 PAIESHDWRIITGCDPKNTRWSYHNGG-SWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRL-- 507 (575)
Q Consensus 432 Pp~~~~~Wr~~t~~dpkn~P~SYHNGg-vWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l-- 507 (575)
| .+..||+|+ +||-++ | ++ +.||.++|..++ +++........
T Consensus 445 ~-----------------~sgqQWD~PN~WaPlq-----~--------i~----i~GL~~yG~~~lA~~La~rwl~~~~~ 490 (542)
T PRK13272 445 L-----------------KTGQQWDEPNGWAPLQ-----W--------VA----VDGLRRYGEDALARTIGERFLAQVQA 490 (542)
T ss_pred C-----------------CccccCCCCCccHhHH-----H--------HH----HHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2 346899999 999999 9 88 999999999887 55544333322
Q ss_pred ---cCCCCCCccCCC-CCCccC---ccCCccccchHHHHHHHHHhccC
Q 048475 508 ---LKDSWPEYYDGK-LGRYIG---KQARKFQTWSIAGYLVAKMMLED 548 (575)
Q Consensus 508 ---~~~~~pEyfdG~-tG~p~G---~~a~~~QaWSaA~~L~a~~~L~~ 548 (575)
..+.+.|+||-. .|...| ...+..++||.|.+|-+-.....
T Consensus 491 ~~~~~g~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNgV~L~lL~~yg~ 538 (542)
T PRK13272 491 LFAREHKLVEKYGLDGNAAGGGGGEYALQDGFGWTNGVTLMLLNLYPP 538 (542)
T ss_pred HHhhcCceeEEeecCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhcc
Confidence 357899999942 111111 12345899999998866555443
No 15
>PRK13270 treF trehalase; Provisional
Probab=99.54 E-value=1.5e-12 Score=144.36 Aligned_cols=328 Identities=12% Similarity=0.129 Sum_probs=212.9
Q ss_pred HHHHHHHHHhhccccCCcceeeecCCC--CccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhcccc
Q 048475 106 GEAWDALRRSLVYFRGKPVGTIAALDS--SEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRF 183 (575)
Q Consensus 106 ~~a~e~L~~s~v~~~~~pvGtlAa~d~--~~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~ 183 (575)
..-|..|-|.... ...-+++--..+ +...-.|..++.=|+--.++|+|.+|..++||+.+.-++.+-
T Consensus 136 ~~lW~~L~R~~~~--~~~~~Sli~lp~p~iVPGGRFrE~YYWDSYwi~~GLl~sg~~~~a~~mi~Nf~~li--------- 204 (549)
T PRK13270 136 DQLWPVLTREPQD--HIPWSSLLALPQSYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMI--------- 204 (549)
T ss_pred HHHhHHhcccccC--CCCcCccccCCCCeEecCCCcccchhhhHHHHHHHhhhcCcHHHHHHHHHHHHHHH---------
Confidence 4456666665511 112344444444 245668999999999999999999999999999999998532
Q ss_pred ccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhcc
Q 048475 184 QLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSLC 261 (575)
Q Consensus 184 ~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~~ 261 (575)
..-|.|||.-++ . |.+| ---|.|...+..|++ +|.++++ .|.+++=..+-.+..
T Consensus 205 -~~yGfIPNG~R~-------------Y----Yl~R----SQPP~l~~Mv~~y~~--~~~~~~~~~lp~l~~E~~fWm~~~ 260 (549)
T PRK13270 205 -ENYGHIPNGNRT-------------Y----YLSR----SQPPVFALMVELFEE--DGVRGARRYLDHLKMEYAFWMDGA 260 (549)
T ss_pred -HHcCcCcCCchh-------------c----cccC----CCCHhHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHcCCC
Confidence 367999997653 2 3455 122667777777776 4555653 344444444222210
Q ss_pred --------------cCCC--cccCC------C------------------------cc------c-------cCCccccC
Q 048475 262 --------------LSEG--FDTFP------T------------------------LL------C-------ADGCCMID 282 (575)
Q Consensus 262 --------------~~dG--f~~yp------t------------------------ll------~-------~Dg~~miD 282 (575)
..+| +-.|- . +- + .|+..+.+
T Consensus 261 ~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsyreD~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~ 340 (549)
T PRK13270 261 ESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLAS 340 (549)
T ss_pred CccCcccccceeEecCCCCccccccCCCCCCCCchhHHHHHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCccccc
Confidence 0122 21120 0 00 0 11111111
Q ss_pred ---Cch------HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccc
Q 048475 283 ---RRM------ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKF 353 (575)
Q Consensus 283 ---rrm------aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkf 353 (575)
..+ ++.|.+-+..++|++..|.. +.++.+.++++.++..|++.+|.+.++++
T Consensus 341 i~T~~iipVDLNaiL~~~e~~LA~~a~~lG~~-~~a~~~~~~A~~r~~AI~~~LWnee~G~~------------------ 401 (549)
T PRK13270 341 IRTTQFIPIDLNAFLYKLESAIANISALKGEK-ETEALFRQKASARRDAVNRYLWDDENGIY------------------ 401 (549)
T ss_pred ccccCcchhhHHHHHHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHhccCcccCeE------------------
Confidence 111 99999999999999999644 55677999999999999999997766433
Q ss_pred cCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCC
Q 048475 354 NVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPA 433 (575)
Q Consensus 354 ni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp 433 (575)
++=+++-+.. +.++++|+++|++|+++++|+.++++.+.. .++.+.++. +
T Consensus 402 ---------------------~DYD~~~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~----t 451 (549)
T PRK13270 402 ---------------------RDYDWRREQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGIL----A 451 (549)
T ss_pred ---------------------EecccccCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcC----C
Confidence 2223332222 346889999999999999999999999863 344344432 1
Q ss_pred ccCCCceeeeCCCCCCCCcccccCC-CCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhh----
Q 048475 434 IESHDWRIITGCDPKNTRWSYHNGG-SWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRL---- 507 (575)
Q Consensus 434 ~~~~~Wr~~t~~dpkn~P~SYHNGg-vWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l---- 507 (575)
. .+.+..||.|+ +||-++ | ++ +.||.++|..++ +++.....+..
T Consensus 452 ----------S---~~~sgqQWD~PN~WaPlq-----w--------mi----ieGL~ryG~~~lA~~LA~rwl~~~~~~~ 501 (549)
T PRK13270 452 ----------S---EYETGEQWDKPNGWAPLQ-----W--------MA----IQGFKMYGDDLLGDEIARSWLKTVNQFY 501 (549)
T ss_pred ----------C---CCCCcccCCCCCCCccHH-----H--------HH----HHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 1 24567899999 899999 9 88 999999999877 55543332222
Q ss_pred -cCCCCCCccCCCCCCccC-----ccCCccccchHHHHHHHHHhcc
Q 048475 508 -LKDSWPEYYDGKLGRYIG-----KQARKFQTWSIAGYLVAKMMLE 547 (575)
Q Consensus 508 -~~~~~pEyfdG~tG~p~G-----~~a~~~QaWSaA~~L~a~~~L~ 547 (575)
..+.+.|+||..++.+.| ......+.||.|.+|-+-....
T Consensus 502 ~~~g~m~EKYdv~~~~g~~GgGGEY~~q~GFGWTNGV~l~~l~~yg 547 (549)
T PRK13270 502 QEHHKLIEKYHIAGGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYG 547 (549)
T ss_pred hhcCeeEEEecCCCCCCCCCCCCCcCCCCCcCcHHHHHHHHHHHhC
Confidence 357899999986543221 1233589999999887655443
No 16
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.46 E-value=2.6e-12 Score=141.76 Aligned_cols=308 Identities=17% Similarity=0.219 Sum_probs=194.4
Q ss_pred ccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCc
Q 048475 134 EEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGE 213 (575)
Q Consensus 134 ~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe 213 (575)
...-.|...+.=|+--.++|+|.+|..+.||+.+.-++.+- ..-|.|||.-++ .|
T Consensus 121 VPGGRF~E~YyWDSYfi~~GLl~s~~~~~a~~mi~Nf~~~i----------~~yGfipNg~R~-------------Yy-- 175 (512)
T PF01204_consen 121 VPGGRFREMYYWDSYFIILGLLASGMYETAKGMIENFLYLI----------DRYGFIPNGNRT-------------YY-- 175 (512)
T ss_dssp --BTTB-S-BHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH----------HHHSS--SBSBG-------------GG--
T ss_pred eeCCCcccchhHhHHHHHHHHHHcCCHHHHHHHHHHHHHHH----------HHhCcCCCCccH-------------Hh--
Confidence 44568999999999999999999999999999999988532 356999997653 22
Q ss_pred ccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHh-c------ccCCCcc--cC------CC-----
Q 048475 214 SAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILS-L------CLSEGFD--TF------PT----- 271 (575)
Q Consensus 214 ~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~-~------~~~dGf~--~y------pt----- 271 (575)
.+| ---|.+...+..|++.|+|.++++ .|.+++=+.|-.. . .+.+++. .| |.
T Consensus 176 --l~R----SQPPlla~mV~~~y~~t~d~~~l~~~lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~prpEsy~ 249 (512)
T PF01204_consen 176 --LNR----SQPPLLAQMVREYYEATKDKAFLREALPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPRPESYR 249 (512)
T ss_dssp --TT-------S--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-CCCCC
T ss_pred --ccC----CCCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCcchHHH
Confidence 233 233889999999999999999996 5777776666552 1 1122221 11 00
Q ss_pred ---------------------cc--ccCCc-----cccC----------Cc---h------HHHHHHHHHHHHhhccCCC
Q 048475 272 ---------------------LL--CADGC-----CMID----------RR---M------ALFFMALRCALVLLKQDDE 304 (575)
Q Consensus 272 ---------------------ll--~~Dg~-----~miD----------rr---m------aL~Y~ALr~aa~L~~~~g~ 304 (575)
+- +-+|- ++.+ .+ + ++.|.+.+.+++|++.+|.
T Consensus 250 eD~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~~lG~ 329 (512)
T PF01204_consen 250 EDVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAELLGD 329 (512)
T ss_dssp HHHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHHHTT-
T ss_pred hhHHHHHhhcccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHHHcCc
Confidence 00 01111 1111 00 1 9999999999999999964
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCcc
Q 048475 305 GKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKM 384 (575)
Q Consensus 305 ~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~ 384 (575)
.+.++.+.+++..++..|+++||.+.++++ ++=++....
T Consensus 330 -~~~a~~~~~~A~~~~~aI~~~lWdee~g~~---------------------------------------~Dyd~~~~~- 368 (512)
T PF01204_consen 330 -QEKAEEYRQRAEERKEAINQYLWDEEDGFY---------------------------------------YDYDLRTGK- 368 (512)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHTEETTTTEE-----------------------------------------EETTTTE-
T ss_pred -hhHHHHHHHHHHHHHHHHHHhCccCCCCeE---------------------------------------EeeeCCCCC-
Confidence 466788999999999999999998877533 111222211
Q ss_pred cccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCC-CCccc
Q 048475 385 DFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGG-SWPVE 463 (575)
Q Consensus 385 d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGg-vWP~l 463 (575)
..+.++..++++|++|+++++|+.++++.+.. .+.....+. +|.. -..+.+.+..||+|+ +||-+
T Consensus 369 ~~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~--~~~g---------~~ts~~~~~~qWD~Pn~WaPl 434 (512)
T PF01204_consen 369 RSPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLT--FPGG---------IPTSLYDTGQQWDGPNVWAPL 434 (512)
T ss_dssp EGG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC---CSE---------CTTCTTTTTSTTSTTEEEHHH
T ss_pred CcccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCcc--cCCC---------CCCccccccccCCCCCccHhH
Confidence 12346778999999999999999888887764 232222221 1211 113345588999999 79999
Q ss_pred ccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHH----Hhhh-cCCCCCCccCCCC-CCcc---C-ccCCccc
Q 048475 464 SAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELA----ESRL-LKDSWPEYYDGKL-GRYI---G-KQARKFQ 532 (575)
Q Consensus 464 ~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~----~~~l-~~~~~pEyfdG~t-G~p~---G-~~a~~~Q 532 (575)
+ | ++ +.||.++|..++ +++.... ..-+ ..+.+-|.||..+ |... | .......
T Consensus 435 q-----~--------~~----i~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~~~~gg~gGeY~~q~GF 497 (512)
T PF01204_consen 435 Q-----W--------MA----IEGLRRYGYRELARRLAQRWLRLNYKVFKRTGKMFEKYDVEDGGEPGGGGGEYPVQDGF 497 (512)
T ss_dssp H-----H--------HH----HHHHHHTT-HHHHHHHHHHHHHHHHHCCCCCSSEBSEEETTTTSCEC-S-SSS---BS-
T ss_pred H-----H--------HH----HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhcCchhccccceeccccCCCCCcccCCCCC
Confidence 9 8 88 999999999877 5553322 2222 4467999999764 2222 1 2334688
Q ss_pred cchHHHHHHHHH
Q 048475 533 TWSIAGYLVAKM 544 (575)
Q Consensus 533 aWSaA~~L~a~~ 544 (575)
.||.|.+|.+-.
T Consensus 498 GWTNgv~l~~l~ 509 (512)
T PF01204_consen 498 GWTNGVYLDLLD 509 (512)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccHHHHHHHHHH
Confidence 999999876543
No 17
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.43 E-value=2.6e-13 Score=143.95 Aligned_cols=294 Identities=17% Similarity=0.119 Sum_probs=84.5
Q ss_pred HHHHHhcCCChHHHHHHHHHHHhhchhhhhcc---------ccccCCCCCCCccccc-ccccCCCcccccCcCcccCCCc
Q 048475 150 SALAFLMNGEPEIVKNFILKTLRLQSWEKKID---------RFQLGEGVMPASFKVL-HDPIRNTETLIADFGESAIGRV 219 (575)
Q Consensus 150 SaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld---------~~~~~~G~mP~sfkv~-h~~~~~~~~~~~dfGe~~iGrv 219 (575)
++++++.. -|++.|.++..++..|-.+.+-- .-+...|.||..+-.. .+| -.....|. +-...
T Consensus 23 ~s~al~~l-fP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~vphdlg~p~~~P----~~~~n~y~--~~~~~ 95 (365)
T PF04685_consen 23 ASFALLKL-FPELERSMQRDFADAILSEDNTERKILYDGKIAPRKVRGAVPHDLGSPFDDP----WDRTNAYN--YHDVY 95 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccc--ccccc
Confidence 34444443 89999999999998775542100 0012347777755321 111 01111111 00112
Q ss_pred CCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhc-ccCCCcccCCCc--cccCCccccCCch---HHHHHH
Q 048475 220 APVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSL-CLSEGFDTFPTL--LCADGCCMIDRRM---ALFFMA 291 (575)
Q Consensus 220 ~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~-~~~dGf~~yptl--l~~Dg~~miDrrm---aL~Y~A 291 (575)
.-+|..++||+.+++|++.|||.+|++ +|.|+++|+|++.. .+.||+++-+.- ..-|.-.+.+... +||+.|
T Consensus 96 ~~~D~~~~fVL~vyr~~~~TGD~~fL~~~wp~v~~a~~~~~~~D~d~dGl~e~~g~~D~TyD~~~~~G~say~~~L~laA 175 (365)
T PF04685_consen 96 AWKDLNPKFVLQVYRDYKWTGDRDFLKEMWPAVKKAMDYLLSWDRDGDGLPENPGHPDQTYDDWSMYGPSAYCGGLWLAA 175 (365)
T ss_dssp ---------------------------EHHHHHHHHHHHHHHSB--TTS-BEEET---SSSTT-EEEEEEHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhhhHHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccCCeeCCCHHHHHHHHHH
Confidence 369999999999999999999999998 99999999999985 467888764431 1112222222111 999999
Q ss_pred HHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCC
Q 048475 292 LRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIR 371 (575)
Q Consensus 292 Lr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ 371 (575)
|+++++|++.++ ..+.+++..+.++..+..|++.+|+.. -|+ ..+++- ....
T Consensus 176 L~A~~emA~~lg-d~~~a~~y~~~~~~~~~~~~~~LWnGe-----yy~--------~~~d~~--------------~~~~ 227 (365)
T PF04685_consen 176 LRAAAEMAKILG-DPELAAKYRELAEKAKKAFNKKLWNGE-----YYR--------QWYDSK--------------YQNG 227 (365)
T ss_dssp HHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHSEETT-----EE----------EE-----------------TTS-
T ss_pred HHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHhhCHh-----hee--------eeeccC--------------CCCC
Confidence 999999999996 446678899999999999999999654 111 001000 0000
Q ss_pred CceeeecccCCcccccccccchhHHH---hcCCCCHHHHHHHHHHHHHhHHhhh----ccCCcccccCCccCCCceeeeC
Q 048475 372 GGYFIGNVSPAKMDFRWFALGNCIAI---LSSLATEEQSNAIMDLIESRWEELV----GEMPIKVCYPAIESHDWRIITG 444 (575)
Q Consensus 372 ggYl~gnv~P~~~d~R~f~lGN~lAL---lsGla~~eqa~~I~~~i~~~w~~l~----~~~plr~~~Pp~~~~~Wr~~t~ 444 (575)
.+.+.+ + .+|+.++- +-+|+++|+.++.++.|.+ -... +++++.+|.-|.
T Consensus 228 ~~~~aD-----Q------l~Gqw~a~~~gl~~v~~~e~v~sAL~sI~~--~N~~~~~~~~~G~~n~~~p~---------- 284 (365)
T PF04685_consen 228 DGCMAD-----Q------LCGQWWARLLGLGDVLDEEKVKSALRSIYE--YNVKYFLGGEMGAVNGVWPD---------- 284 (365)
T ss_dssp EES-TT------------SS--EEHHHHHHTT-S-HHHHHHHHHHHHH--HHEE-S-BTTTBGGGGS-T-----------
T ss_pred CeEEeC-----h------hhHHHHHHHcCCcCCCCHHHHHHHHHHHHH--hcCeEccCCCCcEEEeeecc----------
Confidence 000000 0 12442222 4677999999999999975 3333 466666664331
Q ss_pred CCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhh-----cCCCCCCccCC
Q 048475 445 CDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRL-----LKDSWPEYYDG 518 (575)
Q Consensus 445 ~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l-----~~~~~pEyfdG 518 (575)
+. -.+-+.|...|||-+. | -+ ++.++..|..+. -++.+....+. .-.+-||.++.
T Consensus 285 g~--~~~~~~q~~evW~G~~-----y--------~~----Aa~mi~~G~~~e~~~~~~~~~~~~~~~~g~~f~~pE~~~~ 345 (365)
T PF04685_consen 285 GK--PDTSSPQSNEVWTGVE-----Y--------AV----AAHMIQEGMVEEGLEIAKGIYDRYYGRKGNPFNTPEAINA 345 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc--cccccccccccccccc-----c--------cc----cccccccccccccccccccccccccccccccccccccccc
Confidence 11 3344677888999888 6 55 777788887665 23322222222 22235888777
Q ss_pred CC
Q 048475 519 KL 520 (575)
Q Consensus 519 ~t 520 (575)
..
T Consensus 346 ~~ 347 (365)
T PF04685_consen 346 DG 347 (365)
T ss_dssp --
T ss_pred cc
Confidence 43
No 18
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.33 E-value=1.7e-11 Score=133.46 Aligned_cols=195 Identities=23% Similarity=0.305 Sum_probs=131.3
Q ss_pred CCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCC--CCCcccchHHHHHHH-hcCCChHHHHHHHHHHHhhchh
Q 048475 100 EPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNY--DQVFVRDFVPSALAF-LMNGEPEIVKNFILKTLRLQSW 176 (575)
Q Consensus 100 ~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY--~~vFgRD~vISaL~~-L~~g~peiaR~~L~~ll~lQs~ 176 (575)
..++++++-|+.-++++-. +-. |.-.+-+.+ ...|+-|+.++++.. ...++.+++|+.|..++..|
T Consensus 114 ~sd~~ln~i~~~~~~T~~~---n~~------~~~~Dcp~RdER~~w~GD~~~~~~~~~~~~~~~~l~~~~l~~~~~~q-- 182 (509)
T PF05592_consen 114 CSDPLLNRIWEMSRRTLRS---NMQ------DVFTDCPKRDERLGWTGDARVSALTAYYSFGDAALYRKWLRDFADSQ-- 182 (509)
T ss_dssp ES-HHHHHHHHHHHHHHHH---TBS------SSB-SBTTT-T---BHHHHHHHHHHHHCCT--HHHHHHHHHHHHGGT--
T ss_pred cCcHHHHHHHHHHHHHHHh---hCC------CCceECcchhhhcCCcchHHHHHHHHHHhCCcHHHHHHHHHHHHHhh--
Confidence 4578999999988877610 111 111122333 567999999999985 66699999999999999655
Q ss_pred hhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHH
Q 048475 177 EKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGM 254 (575)
Q Consensus 177 e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al 254 (575)
.+.|.+|... | ..+ .+.-...|=+++||+.++.|++.|||.++++ +|.+++.|
T Consensus 183 --------~~~G~~p~~~-----P---------~~~---~~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~~~~~~~~~l 237 (509)
T PF05592_consen 183 --------RPDGLLPSVA-----P---------SYG---GGGFGIPDWSLAWIIIPWDYYLYTGDREFLEEYYPAMKRYL 237 (509)
T ss_dssp --------TTSTT-SSBS-----S---------------SSGGGBHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHH
T ss_pred --------cccCCceEEe-----c---------ccC---CCCCCCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3579888754 2 100 0111235667999999999999999999998 89999999
Q ss_pred HHHHhcccCCCcccCCCccccCCcc-------ccCCch---HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHH
Q 048475 255 RLILSLCLSEGFDTFPTLLCADGCC-------MIDRRM---ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMR 324 (575)
Q Consensus 255 ~wi~~~~~~dGf~~yptll~~Dg~~-------miDrrm---aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~ 324 (575)
+++....+. |+...+.--.+||.. ..+... +++|.||+++++|++.+|.. +-++...+++..|+..|+
T Consensus 238 ~~~~~~~~~-~~~~~~~~~~~DW~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~lA~~lg~~-~~a~~y~~~a~~lk~a~~ 315 (509)
T PF05592_consen 238 DYLERRVDD-GLDGLPGWGFGDWLAPGNDGDGPTPGATITNALYYYALRAAAELAEALGKD-EDAAEYRARAERLKAAIN 315 (509)
T ss_dssp HHHHTTB-T-SSB-CCSB--S-SS----TT---SCCEEHHHHHHHHHHHHHHHHHHHCT-H-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCc-cccCCCCCceeecCCccCcccccchHHHHHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHH
Confidence 999987766 333222222357761 112222 99999999999999999754 447889999999999999
Q ss_pred hhhhhchh
Q 048475 325 SYFWLDLK 332 (575)
Q Consensus 325 ~~FW~d~~ 332 (575)
++||.+.+
T Consensus 316 ~~~~d~~~ 323 (509)
T PF05592_consen 316 RHFWDPEK 323 (509)
T ss_dssp HHCEETTT
T ss_pred HhccCccc
Confidence 99996655
No 19
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.3e-10 Score=128.90 Aligned_cols=330 Identities=17% Similarity=0.105 Sum_probs=201.1
Q ss_pred cceeeecCCCC---cccc--CCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCC-CCCcccc
Q 048475 123 PVGTIAALDSS---EEEL--NYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGV-MPASFKV 196 (575)
Q Consensus 123 pvGtlAa~d~~---~~~~--nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~-mP~sfkv 196 (575)
+-+.|||.+.+ ...- -|.-||+||+.++++|++..|..+.++.++.++.+.|..+..+.......|- ++.+-
T Consensus 261 ~G~ivAs~t~~l~~~~~g~~dY~y~W~RD~~~~~~AL~~~G~~~~a~~~f~~l~~~~~~~~~~~~~y~~~g~~~~~~w-- 338 (612)
T COG3387 261 TGAIVASPTTSLPELIGGTRDYRYVWPRDASYAALALLAIGYKKEALRFFEFLPDVQTPNGKLYHKYSIDGSDLAESW-- 338 (612)
T ss_pred CCcEEEcCCCCccccCCCCCCceEEccCcHHHHHHHHHHcCCHHHHHHHHHHHHHhhCCCCceeeEEecCCCcccccc--
Confidence 45566665443 1122 3999999999999999999999999999999999998765432222233331 11100
Q ss_pred cccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC---cHHHHHHHHHHHhcccC--CCcccCCC
Q 048475 197 LHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE---LPECQKGMRLILSLCLS--EGFDTFPT 271 (575)
Q Consensus 197 ~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~---~p~vq~al~wi~~~~~~--dGf~~ypt 271 (575)
....-++ .+...=+|-+.+=...+..|.+.++|.-+.. +..+..+..++.+ ++. .++..-..
T Consensus 339 --------~~~~~~~----~~~pv~~~~~a~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~ 405 (612)
T COG3387 339 --------LPVSGYY----NSFPVRIGNTALVQGALDVYGSIMNDIYFYAKYYAIYILPAADYLRR-MEKIKANLPTPDF 405 (612)
T ss_pred --------ccccCCC----CCCceEEcchhhHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH-HHhhhcCCCCCcc
Confidence 0000011 1222237888898999999999999988875 4555565555555 321 12211000
Q ss_pred ccccCCccccCCchHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhc
Q 048475 272 LLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVN 351 (575)
Q Consensus 272 ll~~Dg~~miDrrmaL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~n 351 (575)
-+|-.-.-...-..+-.|.||.+|+.|+...+ ....++.+.+.+..++..+.+.++....+.+.-+ ..
T Consensus 406 ~~WEer~g~~~yt~~~~~agLd~A~~lA~~~g-d~~~a~~~~~~ad~ik~~v~~~~~~~~~~~f~r~-----------~~ 473 (612)
T COG3387 406 DLWEERGGHFTYTKATVYAGLDAAADLAEEFG-DKGSAEHWRKTADELKEAVLRRGYAEDGGYFVRS-----------LG 473 (612)
T ss_pred ceecccCCcccchHHHHHHHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHhcccccCCeeehh-----------cC
Confidence 00100000000011889999999999999997 4467888999999889888888776554211111 10
Q ss_pred cccCCCCCCcccccccccCCCceeeecccCCcccccccccchhHHHhcCCC--CHHHHHHHHHHHHHhHHhhhccCCccc
Q 048475 352 KFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFALGNCIAILSSLA--TEEQSNAIMDLIESRWEELVGEMPIKV 429 (575)
Q Consensus 352 kfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla--~~eqa~~I~~~i~~~w~~l~~~~plr~ 429 (575)
. .|+. .+++.+ .. ..++|+. +..+..+.++.|+. +|..+.+
T Consensus 474 ~---~~~~--------------~vDasl---------l~-----l~~fg~i~~~D~~~~~t~~~I~~---~L~~~~~--- 516 (612)
T COG3387 474 R---KPDD--------------TVDASL---------LG-----LVLFGFIPPDDPRILATVEAIER---ELLVDGG--- 516 (612)
T ss_pred C---Cccc--------------cccHHH---------hh-----ccccCccCCCCHHHHHHHHHHHH---HHhhcCC---
Confidence 0 0111 111111 11 1134443 44567777888874 4442221
Q ss_pred ccCCccCCCceeeeCCCCCCCCcccccC-CCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHh-h
Q 048475 430 CYPAIESHDWRIITGCDPKNTRWSYHNG-GSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAES-R 506 (575)
Q Consensus 430 ~~Pp~~~~~Wr~~t~~dpkn~P~SYHNG-gvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~-~ 506 (575)
+|+.+.. .+.+ .+=++ +.|+.... | + +..+..+|+.+. +++++-.++ .
T Consensus 517 --------gi~RY~~---~~~d-~~~~~~~~w~i~t~----W--------l-----~~~~~~~g~~~~a~~ll~~l~~~a 567 (612)
T COG3387 517 --------GIRRYNN---EYDD-GLGGDNGPWIITTL----W--------L-----SEYYLALGRLDEAKKLLEWLLAFA 567 (612)
T ss_pred --------cEEcCcc---cccc-ccCCCCCcceeehh----H--------H-----HHHHHHccchHHHHHHHHHHHHhc
Confidence 3333322 0011 11122 58988873 8 3 588899999987 777765544 4
Q ss_pred hcCCCCCCccCCCCCCccCccCCccccchHHHHHHHHHhccC
Q 048475 507 LLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLED 548 (575)
Q Consensus 507 l~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~a~~~L~~ 548 (575)
...+-+||=++..+|+|.|-. +|+||-|+++.+-..|++
T Consensus 568 ~~~gll~EQv~~~~G~~~g~~---PlawSha~~I~ai~~l~~ 606 (612)
T COG3387 568 SPLGLLPEQVDDGSGEPLGAF---PLAWSHAEFIIAIRELEE 606 (612)
T ss_pred CCCCCcchhhcCCCCccCCCC---cchhhhHHHHHHHHHHHh
Confidence 466779999999999999887 999999999888877754
No 20
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=99.17 E-value=1.8e-10 Score=133.05 Aligned_cols=321 Identities=14% Similarity=0.200 Sum_probs=176.6
Q ss_pred ChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccC-cCcccCCCcCCccch-HHHHHHHHHHH
Q 048475 159 EPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIAD-FGESAIGRVAPVDSG-FWWIILLRAYT 236 (575)
Q Consensus 159 ~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~d-fGe~~iGrv~~VDSt-lWfIIll~aY~ 236 (575)
++||++.+|..=+.+.. ..|-||..- |+.++-| ...|+ |= . . .|-.|- |=++.++.++.
T Consensus 414 D~dls~eil~sWl~lm~----------~dGWIpREQ-ILG~EAr---skVP~eF~---v-Q-~p~~ANPPTl~l~l~~ll 474 (801)
T PF03200_consen 414 DPDLSLEILASWLDLMN----------EDGWIPREQ-ILGEEAR---SKVPAEFQ---V-Q-YPSNANPPTLFLALEKLL 474 (801)
T ss_pred CHHHHHHHHHHHHHhcc----------ccCCchhhh-hcCHhHH---hcCCHHHH---c-C-CCCCCCCccHHHHHHHHH
Confidence 99999999998876541 457666653 3333211 11111 10 0 0 011111 22334444443
Q ss_pred HH----h-------CCccccC--cHHHHHHHHHHHh-------------------------cccCCCcccCCCccccCCc
Q 048475 237 KS----T-------GDSSLAE--LPECQKGMRLILS-------------------------LCLSEGFDTFPTLLCADGC 278 (575)
Q Consensus 237 ~~----T-------GD~~fl~--~p~vq~al~wi~~-------------------------~~~~dGf~~yptll~~Dg~ 278 (575)
+. . .|.+|++ .|.+++=..|..+ .|+.-|+|.||.-..++..
T Consensus 475 ~~~~~~~~~~~~~~~~~~~l~~~yp~L~~~~~wf~~tQ~G~~~~~yrWrGr~~~~~~~lnp~~L~SGlDDYPRa~~p~~~ 554 (801)
T PF03200_consen 475 DRLKAEKKSEDNSEEDLEFLRRIYPRLKRWYNWFNTTQAGDIPGSYRWRGRDPTTDRELNPHTLTSGLDDYPRASHPSDS 554 (801)
T ss_pred HHHhhccccccchHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceeEcCCCCCccccccccCcCCCCCCCCCCCCCCcc
Confidence 32 2 3567887 7999999999984 1334588888875443321
Q ss_pred -cccCCchHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCC
Q 048475 279 -CMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIP 357 (575)
Q Consensus 279 -~miDrrmaL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~p 357 (575)
-.+|.+ +....+-++|++|+..++..++. ....+.+..|+..+++.-|.+..++|+=+-..++ .-.+...++.
T Consensus 555 e~hvDl~-sWMa~~a~~M~~IA~~L~~~d~~-~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~~~---~v~l~~~~~~- 628 (801)
T PF03200_consen 555 ERHVDLT-SWMAFFALNMARIALELGKEDDA-YEFFEHFEYISDALNKLHWDEEDGFYYDVGLHPD---AVRLEWKEVL- 628 (801)
T ss_pred ceechHH-HHHHHHHHHHHHHHHHhcCcccH-HHHHHHHHHHHHHHHHhcCCcccCceeeeccccc---cceecccccc-
Confidence 223321 33344556666777666433222 2255666667778888899988885522221111 0000000000
Q ss_pred CCCcccccccccCCCceeeecccCCccc--cc-ccccc--hhHHHhcCCCCH--HHHHHHHHHHHHhHHhhhccCCcccc
Q 048475 358 DSLPEWVFDFMPIRGGYFIGNVSPAKMD--FR-WFALG--NCIAILSSLATE--EQSNAIMDLIESRWEELVGEMPIKVC 430 (575)
Q Consensus 358 d~ip~w~~~w~p~~ggYl~gnv~P~~~d--~R-~f~lG--N~lALlsGla~~--eqa~~I~~~i~~~w~~l~~~~plr~~ 430 (575)
+.|.+-...++-.... .+ ....| ++.+++.+|+++ ++.++|++.+.. =+++.+++|+|++
T Consensus 629 ------------~~~~~~~~~~r~~~~~~~~~~v~~~Gyvsl~Plll~ll~~ds~~L~~~L~~l~D-~~ef~s~yGirSL 695 (801)
T PF03200_consen 629 ------------ENGQFRRELVRVVRGEPQLQLVCHFGYVSLFPLLLGLLPPDSERLERLLERLLD-EDEFWSPYGIRSL 695 (801)
T ss_pred ------------cccccchhheecccCCccccceeeecccCCCchhhccCCCCHHHHHHHHHHhcC-hhhccCCCCCccc
Confidence 0000000000000000 00 01222 566788888876 477889998863 1689999999999
Q ss_pred cCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH---HHHHH------
Q 048475 431 YPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI---KRAIE------ 501 (575)
Q Consensus 431 ~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~---~~al~------ 501 (575)
+.. ++-+. ..+.-. .-+||+|+||..++ | |+ +.||.+++..+- +++.+
T Consensus 696 Sk~--~~~y~---~~~~e~-d~~YWRGpIW~~~N-----y--------L~----i~aL~~y~~~~g~~~~~a~~~y~~Lr 752 (801)
T PF03200_consen 696 SKS--DPFYG---PGENEH-DPSYWRGPIWIPIN-----Y--------LL----IEALRRYGYYYGPYQERAKEIYKELR 752 (801)
T ss_pred cCC--Ccccc---ccCCcc-CCCcccCccchhhH-----H--------HH----HHHHHHHhccCchHHHHHHHHHHHHH
Confidence 752 22111 111111 23799999999999 8 88 899999984321 22211
Q ss_pred -----HHHhhh-cCCCCCCccCCCCCCccCccCCcccc-chHHHHHHHH
Q 048475 502 -----LAESRL-LKDSWPEYYDGKLGRYIGKQARKFQT-WSIAGYLVAK 543 (575)
Q Consensus 502 -----~~~~~l-~~~~~pEyfdG~tG~p~G~~a~~~Qa-WSaA~~L~a~ 543 (575)
...+.. ..+-+-|+|++.||++.|+. ++| ||+..+|++.
T Consensus 753 ~nli~nv~~~~~~tg~~~E~Y~~~tG~g~g~~---~FtGWtslv~~im~ 798 (801)
T PF03200_consen 753 KNLINNVYKEYKRTGYFWEQYNPETGRGQGAH---PFTGWTSLVVLIMA 798 (801)
T ss_pred HHHHHHHHHHHhhcccEEEeECCCCCcccCCC---CCCchHHHHHHHHh
Confidence 111222 34458999999999998876 666 9998876653
No 21
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.16 E-value=1.1e-08 Score=116.12 Aligned_cols=349 Identities=14% Similarity=0.096 Sum_probs=191.8
Q ss_pred CcceeeecCCCC-----ccccC--CCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcc
Q 048475 122 KPVGTIAALDSS-----EEELN--YDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASF 194 (575)
Q Consensus 122 ~pvGtlAa~d~~-----~~~~n--Y~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sf 194 (575)
.+-+.|||...+ .+..| |.-||.||+..++.+++..|..+.++.|+.++.+.|. ..|-.|...
T Consensus 268 ~~GAiIAA~Tts~pe~~g~~~n~dYryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l~~~~~----------~~G~~lq~y 337 (648)
T TIGR01535 268 NPGAYIASLSIPWGDGQADDNTGGYHLVWPRDLYQVANAFLAAGDVDSALRSLDYLAKVQQ----------DNGMFPQNS 337 (648)
T ss_pred CCCcEEEecCCCCCccCCCCCCCceEEEehhhHHHHHHHHHHCCCHHHHHHHHHHHHHHhc----------cCCCcCcee
Confidence 345667776432 23345 9999999999999999999999999999999998885 234334333
Q ss_pred cccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHHHHHHHHHhcccCCCcccCCCccc
Q 048475 195 KVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLC 274 (575)
Q Consensus 195 kv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al~wi~~~~~~dGf~~yptll~ 274 (575)
.|- +++.-.+ .=.|-+-..|.+++.+.+. |..+ -++.|+++++++.+......++--- .
T Consensus 338 ~vd---------G~~~~~~------iQlD~~g~~i~~~~~l~~~--~~~~-~~~~vk~aadfl~~~~p~p~~d~WE---e 396 (648)
T TIGR01535 338 WVD---------GKPYWTG------IQLDETAFPILLAYRLHRY--DHAF-YDKMLKPAADFIVKNGPKTGQERWE---E 396 (648)
T ss_pred ccC---------CCCCCCC------ccccHHHHHHHHHHHHHHc--CcHH-HHHHHHHHHHHHHHcCCCCCCCccc---c
Confidence 221 1111111 1278887777777766663 3322 2788999999999864322222100 0
Q ss_pred cCCccccCCchHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhcccc
Q 048475 275 ADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFN 354 (575)
Q Consensus 275 ~Dg~~miDrrmaL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfn 354 (575)
-.|... -.++-.|.||.+|++|++..+.. +.++++.+.+..++..|.++.|.+...+-. ..|+-...
T Consensus 397 r~g~~~--~T~a~v~aaL~~Aa~iA~~~g~~-~~a~~w~~~Ad~i~~~i~~~~~~~~g~~~~------~~~f~r~~---- 463 (648)
T TIGR01535 397 IGGYSP--STLAAEIAGLTAAADIAEQNGDA-GSAQKYRETADNWQKLIENWTFTTNGPLGD------GQYYLRIA---- 463 (648)
T ss_pred cCCcCc--hhHHHHHHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHHHHhCcCCCcccCC------CCeEEEee----
Confidence 001000 00166779999999999998754 567888888888999999999987622100 00000000
Q ss_pred CCCCCCcccccccccCCCceeeecccCCccc-ccccccchhH-HHhcCCCCH--HHHHHHHHHHHHhHHhhhccCCcccc
Q 048475 355 VIPDSLPEWVFDFMPIRGGYFIGNVSPAKMD-FRWFALGNCI-AILSSLATE--EQSNAIMDLIESRWEELVGEMPIKVC 430 (575)
Q Consensus 355 i~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d-~R~f~lGN~l-ALlsGla~~--eqa~~I~~~i~~~w~~l~~~~plr~~ 430 (575)
|..-|+ ..+...+.|.++.... ...+ +-+| ...+|+.++ ++-..-++.|++ +|...-|.-.+
T Consensus 464 --~~~~~~-------~~~~~~~~n~~~~~~~~~~vD--aSlL~L~~~G~~~~dDPri~~Tl~aIe~---~L~~~~~~~g~ 529 (648)
T TIGR01535 464 --GLGDPN-------ADFLINIANGGGVYPEKEVLD--PGFLELVRLGVKSPDDPHILATLKEIDS---TIKVDTPKGPS 529 (648)
T ss_pred --cCCCCc-------cccccccccccccCCCCCccC--HHHHHHHHcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCe
Confidence 000000 1112233333322211 1111 2233 236887664 455555566653 45432211100
Q ss_pred cCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHHHHHHHHHHhhh-cC
Q 048475 431 YPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFIKRAIELAESRL-LK 509 (575)
Q Consensus 431 ~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~~~al~~~~~~l-~~ 509 (575)
+-.-..+|+.....+.+.+ --..|-.||.+.+ | + +.-.+..|... ...++-++.+- ..
T Consensus 530 ~~RY~~Dgyg~~~~~~~~~---~~~~G~~Wpi~T~----~--------~-----~~y~l~~~~~a-~~~l~~~~~~a~~~ 588 (648)
T TIGR01535 530 WYRYTHDGYGEPAKTEAYD---GTGKGRLWPLLTG----E--------R-----GHYELAAGKDA-TPYLKAMEKFANEG 588 (648)
T ss_pred EEecCCCCCCCcCCCCCcc---CCcCCceeehhhh----H--------H-----HHHHHHcCChH-HHHHHHHHHhcCcC
Confidence 0000012222221111111 1233667999997 6 1 22223344322 44555555544 34
Q ss_pred CCCCCccCCCC---------CCccCccCCccccchHHHHHHHHHhccCCCc
Q 048475 510 DSWPEYYDGKL---------GRYIGKQARKFQTWSIAGYLVAKMMLEDPSH 551 (575)
Q Consensus 510 ~~~pEyfdG~t---------G~p~G~~a~~~QaWSaA~~L~a~~~L~~p~~ 551 (575)
+-+||=.+..+ |+|.|+. .+=+||-|+|+.+-+-+.+-.-
T Consensus 589 g~lpEQV~d~~~~~~~~~~~G~pt~Sa--~PL~WsHA~yi~l~~s~~~g~~ 637 (648)
T TIGR01535 589 GMIPEQVWDQTDLPSRGLFYGLPTDSA--SPLNWAHAEYVKLLRSNIDGSV 637 (648)
T ss_pred CCcCcccCCCCCCcccccccCCcCCcc--ccchhhHHHHHHHHHHhhcCCc
Confidence 45899887766 7776543 6899999999988887765443
No 22
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.07 E-value=3.8e-09 Score=121.46 Aligned_cols=267 Identities=19% Similarity=0.268 Sum_probs=187.2
Q ss_pred Ccc-cchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcC
Q 048475 142 VFV-RDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVA 220 (575)
Q Consensus 142 vFg-RD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~ 220 (575)
-|| ||..=-.+.+++. +|+++|.-++.+++.|= .+|-.|.-|. | ....+..+-. .
T Consensus 611 A~GfRD~~Qd~l~f~~~-~p~~aR~qIl~~as~Qf----------~eGd~~hWf~----p-~t~ag~qir~--------~ 666 (1056)
T COG3459 611 AFGFRDQLQDTLEFLLA-RPALARKQILDAASRQF----------VEGDVQHWFL----P-DTYAGVQIRT--------S 666 (1056)
T ss_pred eeccccccccchhhhhc-CHHHHHHHHHHHHhhcc----------cCCCcccccc----c-cccccchhhc--------c
Confidence 344 8888888888877 79999999999997762 3366677663 2 0112211111 1
Q ss_pred CccchHHHHHHHHHHHHHhCCccccC---------------------cHHHHHHHHHHHhcccCCCcccCCCccccCCcc
Q 048475 221 PVDSGFWWIILLRAYTKSTGDSSLAE---------------------LPECQKGMRLILSLCLSEGFDTFPTLLCADGCC 279 (575)
Q Consensus 221 ~VDStlWfIIll~aY~~~TGD~~fl~---------------------~p~vq~al~wi~~~~~~dGf~~yptll~~Dg~~ 279 (575)
.-|--+|-+.++..|.+.|||.++++ ..||++|++.+.+..-..|+ |.++-+||.+
T Consensus 667 ~sDdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r~g~~gl---pli~gGDWND 743 (1056)
T COG3459 667 ISDDVVWLLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVARLGPHGL---PLILGGDWND 743 (1056)
T ss_pred cCCceeeeHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHhcCCCCc---ccccCCcccc
Confidence 35778999999999999999999985 25899999999864322232 2233355544
Q ss_pred ccCC----c----h---HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhh
Q 048475 280 MIDR----R----M---ALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHT 348 (575)
Q Consensus 280 miDr----r----m---aL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~ 348 (575)
=+++ . | -+++.+|+...+|++..+.. +.++.+.+-+++++.....+=|.
T Consensus 744 ~ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r~d~-~r~~~~~~~~ea~~~~~~~~~wD------------------- 803 (1056)
T COG3459 744 GLNLVGNGGKGESVWLGWFLALTLQTFKELAKARGDE-ARADTWAKHVEALREALETNGWD------------------- 803 (1056)
T ss_pred cccccccCCccceeehhhHHHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHHhcCCC-------------------
Confidence 3332 1 1 68899999999999988544 55677888888877766666663
Q ss_pred hhccccCCCCCCcccccccccC----CCceeeecccCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhcc
Q 048475 349 AVNKFNVIPDSLPEWVFDFMPI----RGGYFIGNVSPAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGE 424 (575)
Q Consensus 349 a~nkfni~pd~ip~w~~~w~p~----~ggYl~gnv~P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~ 424 (575)
.+|+-+ .|.++ .+|-...++++.++|.+++++|..++++|.+-|+.|+ +.|+.|
T Consensus 804 ----------------g~wy~r~~~d~g~~l---gs~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~---k~L~~p 861 (1056)
T COG3459 804 ----------------GEWYRRGYGDDGTPL---GSPEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVM---KYLVDP 861 (1056)
T ss_pred ----------------cceEEeccccCCCcc---cCCCCcccceeeeccchhhhhCCCChHHHHHHHHHHH---HhccCc
Confidence 222222 12222 3366677889999999999999999999999999998 699999
Q ss_pred CCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH
Q 048475 425 MPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI 496 (575)
Q Consensus 425 ~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~ 496 (575)
.++|..-||.... ..--|.=.++-|..=.||+..-|-.- | . +.|++|+|+.+.
T Consensus 862 dgvrL~tppf~~~--~~~~gyiK~y~pgvREnGgQYtHa~~----w--------~-----i~Alak~G~a~e 914 (1056)
T COG3459 862 DGVRLFTPPFSYT--KGDPGYIKRYPPGVRENGGQYTHAAT----W--------V-----ILALAKMGRADE 914 (1056)
T ss_pred cccEecCCccccc--CCCCCeeecCCcccccccceeecccH----H--------H-----HHHHHhhccHHH
Confidence 9999999987421 00001112233455689999999774 7 3 599999999765
No 23
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=98.65 E-value=1e-06 Score=95.53 Aligned_cols=199 Identities=21% Similarity=0.200 Sum_probs=106.9
Q ss_pred HHHHHHHhhcc----ccCC-cceeeecCCCCccccCCCCCcccchHHHHHHHhcCCChHHHHH---------------HH
Q 048475 108 AWDALRRSLVY----FRGK-PVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKN---------------FI 167 (575)
Q Consensus 108 a~e~L~~s~v~----~~~~-pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~---------------~L 167 (575)
+++++.+|+.. +++. +-+.|||...+. +.|.-+|.||+++|+.+++..|..+.++. +|
T Consensus 3 ~~~~~~rs~~~l~l~~~~~~~GaiiAsps~s~--pdY~y~W~RD~a~~~~al~~~g~~~~~~~~~~~l~~~~~~~~~~~l 80 (448)
T PF00723_consen 3 YLDAVYRSALTLKLLTQEPITGAIIASPSTSL--PDYRYCWVRDAAYTAYALWALGYRDEARAFFYELEQSLVKLMRGYL 80 (448)
T ss_dssp HHHHHHHTBTTTHTTBTTSSTT-B-S-SSBSS--SBTCSEEHHHHHHHHHHHHHHT-H--HHHHHTTT-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCeEEeecccCC--CCCceeecccHHHHHHHHHHhhhhHHHHHHHhhhhHhhhhhhhhhh
Confidence 56667777653 3444 444455554332 39999999999999999987775444433 44
Q ss_pred HHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccC-
Q 048475 168 LKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE- 246 (575)
Q Consensus 168 ~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~- 246 (575)
....++|+.......++ .|. -+|+|- ....+.+--|..+.|+ .=.|.+-.+++++..|.+. | ..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~-----~~~---~L~~~~-~~~~~~~~~g~~~w~~-~Q~D~~gl~l~~l~~~~~~-g-~~~~~~ 148 (448)
T PF00723_consen 81 QPMYRQQGKVNPSGEFQ-----SPE---GLHEPG-YNVSGPVRVGNPAWGR-PQNDGPGLRLLALWQYIDS-G-LQIIYT 148 (448)
T ss_dssp HHHHHHHTS-BTTB-TT-----TTG---GGGTTE-EETTSEBTTS-B-ES---BTHHHHHHHHHHHHHHHT-T-HHHHHT
T ss_pred hhhhhhcCccCCCcccc-----Ccc---ccccce-ecCCCCcccCchhccC-cCCCchHHHHHHHHHHHHc-C-CCcccc
Confidence 44444444322111111 110 123320 0011112222222333 2389999999999999433 4 33332
Q ss_pred -cHH--HHHHHHHHHhcccCCCcccCCCccccCCccccCCchHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHH
Q 048475 247 -LPE--CQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMALFFMALRCALVLLKQDDEGKEFVERIVKRLHALNYHM 323 (575)
Q Consensus 247 -~p~--vq~al~wi~~~~~~dGf~~yptll~~Dg~~miDrrmaL~Y~ALr~aa~L~~~~g~~~~~a~~i~~R~~aL~~~~ 323 (575)
++. |+..++++.+.-...+|+--- .-.|.....-..+-.+.||++++.++...+. ...++.+.+.+..++..|
T Consensus 149 ~~~~~~I~~~~~yi~~~w~~pd~dlWE---e~~g~~~f~~S~~~~~~AL~~a~~~a~~~g~-~~~~~~~~~~a~~i~~~l 224 (448)
T PF00723_consen 149 YWEVSFIKNDLDYIERNWREPDFDLWE---ERNGIHFFTASSAMQWAALLRAANLAELFGD-PGDAERWRETADEIRERL 224 (448)
T ss_dssp HHHHHTHHHHHHHHHHHTTSBEE-TTS---S-EEEEHH--HHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHcCCcCCcccc---ccCCCCccchhHHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHHHHh
Confidence 677 899999998765544454200 0111111100116678999999999999863 345677777777777777
Q ss_pred H
Q 048475 324 R 324 (575)
Q Consensus 324 ~ 324 (575)
.
T Consensus 225 ~ 225 (448)
T PF00723_consen 225 E 225 (448)
T ss_dssp H
T ss_pred h
Confidence 3
No 24
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.08 E-value=0.00026 Score=78.75 Aligned_cols=303 Identities=17% Similarity=0.230 Sum_probs=183.3
Q ss_pred cccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcc
Q 048475 135 EELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGES 214 (575)
Q Consensus 135 ~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~ 214 (575)
..-.|..+++=|+--++++++-+|+-++|++.+..++- +. ...|.|||.-+- |
T Consensus 165 PGGRF~ElYyWDsYf~~lGL~esgr~d~a~~Mv~nF~~----~I------e~yG~IpNgnRt--------------Y--- 217 (558)
T COG1626 165 PGGRFNELYYWDSYFTMLGLAESGRWDLAKGMVDNFAY----EI------ETYGHIPNGNRT--------------Y--- 217 (558)
T ss_pred CCcccccchHHHHHHHHHHHhhcCcHHHHHHHHHHHHH----HH------HHhccccCCcee--------------e---
Confidence 45689999999999999999999999999999998883 11 356888874420 1
Q ss_pred cCCCcCCccchHHHHHHHHHHHHHhCCccccC-cHHHHHHHHHHHhc--------------ccCCCc---c---cCCCc-
Q 048475 215 AIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE-LPECQKGMRLILSL--------------CLSEGF---D---TFPTL- 272 (575)
Q Consensus 215 ~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~-~p~vq~al~wi~~~--------------~~~dGf---~---~yptl- 272 (575)
|.-| ---+-|-.-+-.+++.+||..+.+ .|.+++....+... .+.||+ . .+..+
T Consensus 218 yLsR----SQPPff~~Mv~~~~~~~g~~~~~r~l~~~~key~~w~~~~~~l~~~~~~~~~~~~~dG~~pe~ln~y~dd~~ 293 (558)
T COG1626 218 YLSR----SQPPFFALMVELVAEHEGVAALKRYLPALIKEYAYWMDGVPSLQPKQGYSRVVTLGDGSPPEVLNRYWDDRD 293 (558)
T ss_pred Eeec----CCCCcHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHhccCcccCccccceeEEecCCCCchhhhhhhhcccC
Confidence 0111 111345556666777778554444 56666666433321 123444 1 00000
Q ss_pred ----------cccCCccccCCch------------------------------------------HHHHHHHHHHHHhhc
Q 048475 273 ----------LCADGCCMIDRRM------------------------------------------ALFFMALRCALVLLK 300 (575)
Q Consensus 273 ----------l~~Dg~~miDrrm------------------------------------------aL~Y~ALr~aa~L~~ 300 (575)
+.... -+.+|+. ++.|.-....+.+..
T Consensus 294 tpr~Esy~~t~~~a~-~~~~r~~~eiy~~dRA~reSGwD~ssRw~g~~~~LasIrt~~~~p~dlna~~y~~e~~~~~~~~ 372 (558)
T COG1626 294 TPRQESYHETIATAK-HNPERPLDEIYRDDRAGRESGWDFSSRWLGVPAPLASIRTTSILPVDLNALLYKLEEIIANISA 372 (558)
T ss_pred CccchhhhhhHHHhh-cCcCCChHhhhcchhhhHhccCcccccccCCCccccceeccccchhhhhhHHHHHHHHHHHHHH
Confidence 00000 0001110 778888888888877
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeeccc
Q 048475 301 QDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVS 380 (575)
Q Consensus 301 ~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~ 380 (575)
..+ ..+.+++..+++.+=+..|++++|.++.+.+.=|+ .+
T Consensus 373 ~~~-~~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd---------------------------------------~k 412 (558)
T COG1626 373 IKG-DKETAERYQRKAEARRCAINKYLWDDEAGQYNDYD---------------------------------------WK 412 (558)
T ss_pred hcC-chHHHHHHHHHHHHHHHHHHHHccccccceeehhh---------------------------------------hh
Confidence 775 44667788888888788999999988776553332 11
Q ss_pred CCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHhHHhhhccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCC
Q 048475 381 PAKMDFRWFALGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSW 460 (575)
Q Consensus 381 P~~~d~R~f~lGN~lALlsGla~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvW 460 (575)
-.+... -+++.+++||+.|+++++||+++++.+.. .+..+-||.+|-+.. -.-|-|=|| |
T Consensus 413 ~~~~~~-y~~a~~~~plw~G~a~~era~~~a~~~~~---~l~~pGGl~ast~~s--------------~~QWD~PNg--W 472 (558)
T COG1626 413 LKKRRA-YLSAAALWPLWVGLATPERAQRLADAALS---MLEQPGGLSASTPRS--------------GQQWDYPNG--W 472 (558)
T ss_pred cccccc-ccchhhhhhccCCCCCHHHHHHHHHHHHH---HhcCCCceecccccc--------------cccccCCCC--C
Confidence 111111 13557788999999999999999999974 566677776555421 223444454 5
Q ss_pred cccccCCCCCccchhHHHhhhhhhHHHHHhcCchHH-HHHHH----HHHhhh--cCCCCCCccCCCCCC-ccCccCC---
Q 048475 461 PVESAMPSFWPADQNLQLLLHTIDVSLSYKFKIPFI-KRAIE----LAESRL--LKDSWPEYYDGKLGR-YIGKQAR--- 529 (575)
Q Consensus 461 P~l~a~~gFW~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~----~~~~~l--~~~~~pEyfdG~tG~-p~G~~a~--- 529 (575)
+-+. | +- +.+|.++|...+ .++.. .+.. + ..+.+=|-||=.+|. +.|.-++
T Consensus 473 aPlq-----~--------ia----~~gL~ryG~~~la~~ia~rwL~~v~~-~~d~~~~~VEKydv~~~~~~~g~~geyp~ 534 (558)
T COG1626 473 APLQ-----W--------IA----TQGLKRYGYDILADDIARRWLTNVEQ-FYDYEGKLVEKYDVSRGTGPGGGGGEYPL 534 (558)
T ss_pred ccHH-----H--------HH----HHHHHHHhHHHHHHHHHHHHHHHHHH-HHhhcccceeEeeecccccCCCCCcccCC
Confidence 5555 4 44 899999998877 44432 2222 3 234566666533221 1222222
Q ss_pred -ccccchHHHHHHHHHhcc
Q 048475 530 -KFQTWSIAGYLVAKMMLE 547 (575)
Q Consensus 530 -~~QaWSaA~~L~a~~~L~ 547 (575)
....|+-+.+|.+-.++.
T Consensus 535 q~GFGWtNgv~l~lL~~~~ 553 (558)
T COG1626 535 QDGFGWTNGVVLKLLDLYG 553 (558)
T ss_pred cccccchhHHHHHHHHhhC
Confidence 236899999887665553
No 25
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.0029 Score=71.63 Aligned_cols=322 Identities=15% Similarity=0.155 Sum_probs=192.5
Q ss_pred ccccCCCCCcccchHHHHHHHhcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCc
Q 048475 134 EEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGE 213 (575)
Q Consensus 134 ~~~~nY~~vFgRD~vISaL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe 213 (575)
..+-.|.+.+.=|+--.+.|+|.++..+.||+.+..+..+ + ...|-|||.-++ .|
T Consensus 178 VPGgRF~E~YyWDsywii~GLl~S~m~~takGmieNf~~l----V------~~yG~ipNg~R~-------------YY-- 232 (600)
T KOG0602|consen 178 VPGGRFRELYYWDSYWIIKGLLASQMFDTAKGMIENFISL----V------DTYGFIPNGGRV-------------YY-- 232 (600)
T ss_pred ccCCceeeeecccHHHHHHhHHhhcccHHHHHHHHHHHHH----H------HhcCcccCCCee-------------ee--
Confidence 4567999999999998899999999999999999987731 1 256888886543 22
Q ss_pred ccCCCcCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHH-HHHhccc---CCC--cccCC---------------
Q 048475 214 SAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMR-LILSLCL---SEG--FDTFP--------------- 270 (575)
Q Consensus 214 ~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~-wi~~~~~---~dG--f~~yp--------------- 270 (575)
..| ---+.+.--+..|++.|||.+|+. .|.++.=+. |..+-+. .+| +-.|-
T Consensus 233 --l~R----SQPPllt~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~prPEsy~~d~ 306 (600)
T KOG0602|consen 233 --LNR----SQPPLLTGMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSGPRPESYREDF 306 (600)
T ss_pred --ecc----CCCchhhhhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCceeEEEeccCCCCCCcchHHHH
Confidence 222 122667778899999999999994 455555555 4443321 123 32220
Q ss_pred -------C-----ccc-------cCCc-----cccCCc------------h---HHHHHHHHHHHHhhccCCCChHHHHH
Q 048475 271 -------T-----LLC-------ADGC-----CMIDRR------------M---ALFFMALRCALVLLKQDDEGKEFVER 311 (575)
Q Consensus 271 -------t-----ll~-------~Dg~-----~miDrr------------m---aL~Y~ALr~aa~L~~~~g~~~~~a~~ 311 (575)
+ .++ .-|. ++.++. + +|..+.++.|+.+....|.- +-++.
T Consensus 307 e~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~~~Gd~-~~s~~ 385 (600)
T KOG0602|consen 307 ETAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKYFYVVDGDP-KDSAQ 385 (600)
T ss_pred HHHhcccchHHHHHHHHHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhhhcccCCCh-hHHHH
Confidence 0 000 1111 122211 1 88888999999999988644 45677
Q ss_pred HHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCcccccccccCCCceeeecccCCccccccccc
Q 048475 312 IVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFAL 391 (575)
Q Consensus 312 i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w~~~w~p~~ggYl~gnv~P~~~d~R~f~l 391 (575)
..++..+++..|++.+|.|..+. .++=++.+..- ..-|..
T Consensus 386 ~~~k~~~r~~~i~~vlWde~~g~---------------------------------------w~DYd~~~~~~-~~~~~~ 425 (600)
T KOG0602|consen 386 FEKKSEQRRAAIQEVLWDEEDGA---------------------------------------WFDYDLELKKH-NTYFYA 425 (600)
T ss_pred HHHHHHHHHHHHHHhccCCCCCc---------------------------------------ceecccccccc-CCCcCc
Confidence 88899999999999999876541 12223332211 123566
Q ss_pred chhHHHhcCCCCHHHHHHHHHHHHHhHHhhh-ccCCcccccCCccCCCceeeeCCCCCCCCcccccCCCCcccccCCCCC
Q 048475 392 GNCIAILSSLATEEQSNAIMDLIESRWEELV-GEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVESAMPSFW 470 (575)
Q Consensus 392 GN~lALlsGla~~eqa~~I~~~i~~~w~~l~-~~~plr~~~Pp~~~~~Wr~~t~~dpkn~P~SYHNGgvWP~l~a~~gFW 470 (575)
.||++|+.|..++++...+++.+....+..- -.+|-.+ |. ....--.-|-|=| +||-.. +
T Consensus 426 sn~~Pl~~~~~~~~~~~~~~~~v~~~le~~g~~~~p~gi--P~----------Sl~~s~eQWD~Pn--~WaP~q-----~ 486 (600)
T KOG0602|consen 426 SNFAPLWAGCYPAPDDDKSVDKVLDYLEKSGALTFPGGI--PT----------SLSNSGEQWDFPN--GWAPNQ-----H 486 (600)
T ss_pred hhhhhhhccCCCcccccchHHHHHHHHHHcCCcCCCCCC--cc----------cCCCchhhccCCC--CCCcce-----e
Confidence 8999999999995554444444432112221 1111111 11 1111111223333 366555 4
Q ss_pred ccchhHHHhhhhhhHHHHHhcCchHH-HHHHHHHHhhh--------cCCCCCCccCCC--CCCccC-----ccCCccccc
Q 048475 471 PADQNLQLLLHTIDVSLSYKFKIPFI-KRAIELAESRL--------LKDSWPEYYDGK--LGRYIG-----KQARKFQTW 534 (575)
Q Consensus 471 ~~~~~~~~ll~~~~~~al~k~G~~~~-~~al~~~~~~l--------~~~~~pEyfdG~--tG~p~G-----~~a~~~QaW 534 (575)
++ +.++.+.|.++. +.+..+|.+-+ ..+..+|-||=. +|.+.| .| ....|
T Consensus 487 --------m~----~~gl~~~~~~~~~~~A~kla~~wl~~~~~~~~~~g~~~EKY~vt~~~~~~G~ggEY~~Q--eGFGW 552 (600)
T KOG0602|consen 487 --------MA----IEGLRRAGNQELQEVALKLAQRWLETNFAVFVDSGGMFEKYDVTRDPGPHGGGGEYEVQ--EGFGW 552 (600)
T ss_pred --------hh----hhhhhhcCCHHHHHHHHHHHHHHHHHhhhhhcccCceeEeeccccCCCCCCCCCccccc--cCCCc
Confidence 66 799999997777 55555554322 346689999842 222222 22 58899
Q ss_pred hHHHHHHHHHhccCCCcc--cccccccc
Q 048475 535 SIAGYLVAKMMLEDPSHL--GMISLEED 560 (575)
Q Consensus 535 SaA~~L~a~~~L~~p~~~--~~~~~~~~ 560 (575)
+.+.+|..-.-..+.-.. ....+++.
T Consensus 553 ~Ng~il~~L~~~g~~~~~~~a~~~c~~~ 580 (600)
T KOG0602|consen 553 TNGVILDLLKKYGSDLRRGEACCACDEP 580 (600)
T ss_pred cchhHHHHHHHcCCcccccchhhccCCc
Confidence 999988776666555554 44444443
No 26
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00055 Score=76.52 Aligned_cols=142 Identities=19% Similarity=0.211 Sum_probs=86.1
Q ss_pred HHHHhcCCChHHHHHHHHHHHhhchhhhhccccc-----------cCCCCCCCcccccccccCCCcc-cccCcCcccCCC
Q 048475 151 ALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQ-----------LGEGVMPASFKVLHDPIRNTET-LIADFGESAIGR 218 (575)
Q Consensus 151 aL~~L~~g~peiaR~~L~~ll~lQs~e~~ld~~~-----------~~~G~mP~sfkv~h~~~~~~~~-~~~dfGe~~iGr 218 (575)
++++|+. -||++|+|++.+++.=-+|.+ .++ -.++.+|+-++ | +... ..+-|| .+.-.
T Consensus 368 sfgllll-fPeLek~~~~~f~~~i~~eD~--~~~v~gy~~~~~~~k~~~~tphDLg----~--~ehs~e~~iy~-t~~d~ 437 (721)
T COG4354 368 SFGLLLL-FPELEKSVMRAFARAIPKEDT--EYRVIGYAFPEAERKKDPATPHDLG----P--NEHSIEKPIYG-TYQDP 437 (721)
T ss_pred CchHHHH-hHHHHHHHHHHHHHhccccCC--ceeeeeeccchhhccCCCCCCcccC----c--cccchhccccc-ccCCc
Confidence 3444444 799999999999986554442 221 12334444332 1 1111 122232 01000
Q ss_pred cCCccchHHHHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhcc-cCCCcccCCCccccCCccccCCch--------HH
Q 048475 219 VAPVDSGFWWIILLRAYTKSTGDSSLAE--LPECQKGMRLILSLC-LSEGFDTFPTLLCADGCCMIDRRM--------AL 287 (575)
Q Consensus 219 v~~VDStlWfIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~~-~~dGf~~yptll~~Dg~~miDrrm--------aL 287 (575)
--=+|-++=||.++++|++.|+|.+|++ +|.+.++|+|+...- +.||.=+-.. .+|-.+= +.|| .|
T Consensus 438 ~~wkDlgp~fVLlvYrdf~~T~D~eFL~e~y~~iv~~iD~~~~~d~d~DgiP~~~g--~~d~~fD-a~~i~G~ssy~~sl 514 (721)
T COG4354 438 NLWKDLGPDFVLLVYRDFKFTNDREFLKEVYPVIVEAIDWLKRFDQDNDGIPENSG--AMDNTFD-ATRIQGHSSYCGSL 514 (721)
T ss_pred hhhhhcCCcEEeeehhhhhhcccHHHHHHHHHHHHHHHHHHHhhcccCCCCCcccC--Ccccccc-cceeechhhhhhHH
Confidence 0115666668999999999999999998 999999999997542 4456432111 2222221 2233 89
Q ss_pred HHHHHHHHHHhhccCCCC
Q 048475 288 FFMALRCALVLLKQDDEG 305 (575)
Q Consensus 288 ~Y~ALr~aa~L~~~~g~~ 305 (575)
|-.||-+|..|++.++..
T Consensus 515 ~iaal~A~l~is~~l~~~ 532 (721)
T COG4354 515 FIAALIAALEISKYLLDN 532 (721)
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999999987543
No 27
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00056 Score=78.14 Aligned_cols=209 Identities=19% Similarity=0.246 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchhhhhhccccCCCCCCccc-
Q 048475 286 ALFFMALRCALVLLKQDDEG-KEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEW- 363 (575)
Q Consensus 286 aL~Y~ALr~aa~L~~~~g~~-~~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~~~a~nkfni~pd~ip~w- 363 (575)
+..+-|-|++.++++..|.. .+++..+.+. +.+..+.+.-|.+..+.|+=+ ..+.+- + ..++.|..+..-
T Consensus 607 ~W~~lasrsl~~iae~lg~~~~E~~~a~~e~--~~~e~L~~~HW~ee~~~y~D~--g~h~~d---v-~~~~~p~~g~~~r 678 (849)
T KOG2161|consen 607 CWVGLASRSLNRIAEFLGETEAEYATAITEL--ECKENLVQNHWSEEDQAYCDF--GNHTED---V-SITPEPSIGKQFR 678 (849)
T ss_pred HHHHHHHHHHHHHHHHhcchhhhhhhhhhHH--HHHHHHHHhccChhhCeeeec--cCChhh---c-cccccCCcccchh
Confidence 77788889999999988743 4554434333 246677889999888755332 221110 0 111112111000
Q ss_pred ----ccccccCCCceeeecccCCcccccccccc--hhHHHhcCC--CCHHHHHHHHHHHHHhHHhhhccCCcccccCCcc
Q 048475 364 ----VFDFMPIRGGYFIGNVSPAKMDFRWFALG--NCIAILSSL--ATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIE 435 (575)
Q Consensus 364 ----~~~w~p~~ggYl~gnv~P~~~d~R~f~lG--N~lALlsGl--a~~eqa~~I~~~i~~~w~~l~~~~plr~~~Pp~~ 435 (575)
..+|....-.++.. .+| ++++++..| ++.++-.+++++|.. =.++..+||||+++- .
T Consensus 679 ~~~r~v~~~~p~~e~v~~------------h~GYvSl~P~mlrLlp~~S~rL~~~Ldli~D-~~~lwSpYGlrSLS~--~ 743 (849)
T KOG2161|consen 679 GLVRRVDWFVPNLELVDR------------HIGYVSLFPFMLRLLPATSPRLTKLLDLISD-ENELWSPYGLRSLSR--S 743 (849)
T ss_pred hhheeccccCCcceeeec------------ccceeehhhhHHhhcCCCchHHHHHHHHhcC-cccccCcchhhhhhh--c
Confidence 01111000011111 233 234444444 566788889998854 267889999999973 2
Q ss_pred CCCceee-eCCCCCCCCcccccCCCCcccccCCCCCccchhHHHhhhhhhHHHHHh-cCch---HHHHHHHHHH------
Q 048475 436 SHDWRII-TGCDPKNTRWSYHNGGSWPVESAMPSFWPADQNLQLLLHTIDVSLSYK-FKIP---FIKRAIELAE------ 504 (575)
Q Consensus 436 ~~~Wr~~-t~~dpkn~P~SYHNGgvWP~l~a~~gFW~~~~~~~~ll~~~~~~al~k-~G~~---~~~~al~~~~------ 504 (575)
++=+.-+ +..|| +||+|+||=.++ | |+ ..||.+ +... ....|.++++
T Consensus 744 s~yym~~Nte~d~-----pYWRGpIW~N~N-----Y--------Li----LsaL~~~Y~~~~gp~~~nA~~iyeELRaNl 801 (849)
T KOG2161|consen 744 SPYYMKRNTEHDP-----PYWRGPIWMNVN-----Y--------LI----LSALRHFYLYVPGPYQSNAAKIYEELRANL 801 (849)
T ss_pred CCccccccCCCCC-----cccccceeeehH-----H--------HH----HHHHHHhcccCCCchHHHHHHHHHHHHHHH
Confidence 2211111 22233 899999999999 7 77 677777 3211 1112222221
Q ss_pred -----hhh-cCCCCCCccCCCCCCccCccCCccccchHHHHHH
Q 048475 505 -----SRL-LKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLV 541 (575)
Q Consensus 505 -----~~l-~~~~~pEyfdG~tG~p~G~~a~~~QaWSaA~~L~ 541 (575)
... ..+-+-|+||+.||+..|+. -+..||+-.++.
T Consensus 802 v~Nv~k~~~~tG~~wE~Yd~~tG~G~ga~--~FtGWTaLVl~i 842 (849)
T KOG2161|consen 802 VGNVSKQWQQTGYFWENYDPRTGRGLGAR--HFTGWTALVLLI 842 (849)
T ss_pred HHHHHHHhhccceeeeecCCCCCCccccc--cccchHHHHHHH
Confidence 122 34458999999999887764 577799855443
No 28
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=97.00 E-value=0.0093 Score=65.33 Aligned_cols=213 Identities=19% Similarity=0.270 Sum_probs=114.3
Q ss_pred cCCcceeeecCCCCccccCCCCCcccchHHHHHHH--hcCCChHHHHHHHHHHHhhchhhhhccccc----c--CCCCCC
Q 048475 120 RGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAF--LMNGEPEIVKNFILKTLRLQSWEKKIDRFQ----L--GEGVMP 191 (575)
Q Consensus 120 ~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~--L~~g~peiaR~~L~~ll~lQs~e~~ld~~~----~--~~G~mP 191 (575)
.+.+.-+|...|=. .-|-||+.--..-. |+..+|++++ .++-+.++|+.-..+|+|. . +.|+-|
T Consensus 29 ~~~~~tFViTGDIp-------AmWLRDS~~Q~~pYl~l~~~d~~l~~-li~G~I~rQa~~I~~dPYaNAF~~~~~s~~~~ 100 (424)
T PF06824_consen 29 DEDPDTFVITGDIP-------AMWLRDSAAQLRPYLPLAKEDPSLAR-LIRGVINRQARYILIDPYANAFNPPPESGIPP 100 (424)
T ss_dssp TSTSEEEE-SBSSS-------SEEHHHHHHHCGGGGGGGCC-HHHHH-HHHHHHHHHHHHHHH-TT-SEEESS-----TS
T ss_pred CCCCCeEEEecCch-------hhhccccHhHHHHHHHHhcCCHHHHH-HHHHHHHHHHHHHhcchhhcccCCcccccccc
Confidence 45666677777632 68999987655433 6666776655 6667788999888888874 1 223333
Q ss_pred CcccccccccCCCcccccCcC-cccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHHHHHHHHHhcc--------c
Q 048475 192 ASFKVLHDPIRNTETLIADFG-ESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLC--------L 262 (575)
Q Consensus 192 ~sfkv~h~~~~~~~~~~~dfG-e~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al~wi~~~~--------~ 262 (575)
+.-.- + ..+...+.|. ....-|-.=|||---||-|++.|++.|||.+|+... ..+|++.|++-. +
T Consensus 101 ~~~~~-~----~~D~~~~~~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~-~~~A~~~il~~~~~eq~~t~~ 174 (424)
T PF06824_consen 101 NGNGH-W----QSDTTEMPYDPPWVWERKYELDSLCYFLQLAYQYWKATGDTSFFDED-WLRAVRLILDTWRTEQRPTYD 174 (424)
T ss_dssp S-TSG-C----CGSBS------TTEEE----HHHHHHHHHHHHHHHHHH--GTTSSHH-HHHHHHHHHHHHHHTTG----
T ss_pred cccCC-C----CCCccCCCcCCCceeeecchhhhhhHHHHHHHHHHHhhCChhhhhHH-HHHHHHHHHHHHHHHHHhhhc
Confidence 32110 0 0111111100 000111234999999999999999999999999633 677777777531 1
Q ss_pred CCC--------cccC-----CCcc--------ccCC-----------ccccCCch---HHHHHHHHHHHHhhccCCCCh-
Q 048475 263 SEG--------FDTF-----PTLL--------CADG-----------CCMIDRRM---ALFFMALRCALVLLKQDDEGK- 306 (575)
Q Consensus 263 ~dG--------f~~y-----ptll--------~~Dg-----------~~miDrrm---aL~Y~ALr~aa~L~~~~g~~~- 306 (575)
.|| |..- .||. ..-| .|.+.=-+ +++--+|+.+++|+......+
T Consensus 175 ~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~~~~~~~ 254 (424)
T PF06824_consen 175 EDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVAYTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRALGWDDS 254 (424)
T ss_dssp --SSSCS-S---BESBSSGGGS-HHHHT-S----SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHHTT-THH
T ss_pred cccccCCCcceeeccCCCCCccccCCCcCCcCCCCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHHhccchH
Confidence 112 2110 1111 0111 11111001 888899999999999775443
Q ss_pred -HHHHHHHHHHHHHHHHHHhhhhhchhhhhhhhhccccchh
Q 048475 307 -EFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYS 346 (575)
Q Consensus 307 -~~a~~i~~R~~aL~~~~~~~FW~d~~~l~~iyr~~teey~ 346 (575)
+.+++..+-+..++..|.+|--++..+.-.+|-|.+.-||
T Consensus 255 ~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G 295 (424)
T PF06824_consen 255 AELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFG 295 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS
T ss_pred HHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCC
Confidence 4666666666677777777777776655566655444443
No 29
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=96.84 E-value=0.0062 Score=69.76 Aligned_cols=100 Identities=15% Similarity=0.207 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhCCccccC--cHHHHHHHHHHHhc-ccCCCcccC---CCccc----cCCccccCCchHHHHHHHHHHHH
Q 048475 228 WIILLRAYTKSTGDSSLAE--LPECQKGMRLILSL-CLSEGFDTF---PTLLC----ADGCCMIDRRMALFFMALRCALV 297 (575)
Q Consensus 228 fIIll~aY~~~TGD~~fl~--~p~vq~al~wi~~~-~~~dGf~~y---ptll~----~Dg~~miDrrmaL~Y~ALr~aa~ 297 (575)
|++-+++=+..|||..|++ ||.|..+|+.++++ -|+||.+|. |--+. ++|...+=+ +||-+||++|.+
T Consensus 562 FVLqvYRD~~~tgd~~flk~~wpsv~~ime~l~~fDKD~DGmIEN~GfpDQTYD~W~~tGvSAYCG--gLWlAALqa~~a 639 (879)
T KOG2119|consen 562 FVLQVYRDYVATGDEKFLKAVWPSVYAIMEYLEQFDKDNDGMIENEGFPDQTYDAWSMTGVSAYCG--GLWLAALQAASA 639 (879)
T ss_pred eEEEEEeeeEEeccHHHHHHHHHHHHHHHHHHHhhcccCCcccccCCCCCccccceEEecchhhhh--HHHHHHHHHHHH
Confidence 5555555566789999998 99999999999987 488888863 22111 222111111 999999999999
Q ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHhhhhhc
Q 048475 298 LLKQDDEGKEFVERIVKRLHALNYHMRSYFWLD 330 (575)
Q Consensus 298 L~~~~g~~~~~a~~i~~R~~aL~~~~~~~FW~d 330 (575)
|+...|+. +.++....+++.-+..+.+..|+-
T Consensus 640 mA~~~g~~-~~~~~f~~klekak~~ye~kLWNG 671 (879)
T KOG2119|consen 640 MARQIGDP-NTQDYFNNKLEKAKDVYEKKLWNG 671 (879)
T ss_pred HHHHhCCh-hHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999643 444555555555555667788843
No 30
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=91.92 E-value=14 Score=40.57 Aligned_cols=109 Identities=20% Similarity=0.219 Sum_probs=66.6
Q ss_pred CCcccchHHHHHHH--hcCCChHHHHHHHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCC
Q 048475 141 QVFVRDFVPSALAF--LMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGR 218 (575)
Q Consensus 141 ~vFgRD~vISaL~~--L~~g~peiaR~~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGr 218 (575)
..|-||+.--..-. |+.-++++ |..+.-+.+.|..=.-+|+|.-..-.-++ .--|.. .....-+--+| |
T Consensus 60 AmWLRDStaQvrPYL~lAkeD~~l-~~li~GlvkrQ~~~i~~DPYANAFn~~~n--~~Ghq~--D~T~m~~~vwE----R 130 (434)
T COG3538 60 AMWLRDSTAQVRPYLPLAKEDEEL-RRLIAGLVKRQARYILLDPYANAFNETAN--GAGHQT--DHTEMNPWVWE----R 130 (434)
T ss_pred HHHHhcchhhhccceeecccCHHH-HHHHHHHHHHHHHHhhcChhhhhcccccc--cCCccc--Ccccccchhhe----e
Confidence 67999988766543 55545554 55677788889887777777521111111 101211 00011111222 2
Q ss_pred cCCccchHHHHHHHHHHHHHhCCccccCcHHHHHHHHHHHh
Q 048475 219 VAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILS 259 (575)
Q Consensus 219 v~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al~wi~~ 259 (575)
-.-|||-.-.|-|++.|++.|||.+-. .++..+|++-|++
T Consensus 131 KYEiDSLCYPiqLAYl~wk~Tg~t~~F-de~f~~a~~~il~ 170 (434)
T COG3538 131 KYEIDSLCYPIQLAYLYWKATGDTSQF-DEDFRQAVETILR 170 (434)
T ss_pred eeeccchhhHHHHHHHHHHhcCCcccc-CHHHHHHHHHHHH
Confidence 334999999999999999999999887 4555666666664
No 31
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=87.78 E-value=60 Score=37.63 Aligned_cols=142 Identities=15% Similarity=0.112 Sum_probs=78.5
Q ss_pred CCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCCCCCcccchHHHHHHHhcCCCh----HHHHHHHHHHHhhch
Q 048475 100 EPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEP----EIVKNFILKTLRLQS 175 (575)
Q Consensus 100 ~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~p----eiaR~~L~~ll~lQs 175 (575)
..++.++++++.+++.++.- +.|.+... .+=.++| |+.++..++...|.+ +.++..+..|++.|-
T Consensus 275 ~~~~~~~~~l~~l~~~~~~~---~~g~~~~~------~~~s~~w--DTala~~AL~~ag~~~~~~~~l~ka~~wL~~~Q~ 343 (634)
T cd02892 275 PDSPAFKRHLERIDDFLWLG---PEGMKMCQ------TNGSQVW--DTALAVQALLEAGLAPEFDPALKKALDWLLESQI 343 (634)
T ss_pred CCCHHHHHHHHHHHhcEEEe---cCCcEEEc------CCCCchH--HHHHHHHHHHHcCCCccchHHHHHHHHHHHHHHc
Confidence 57899999999998877432 34544432 1333666 888888887655533 345667788887775
Q ss_pred hhhhccccccCC-CCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHHHHH
Q 048475 176 WEKKIDRFQLGE-GVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGM 254 (575)
Q Consensus 176 ~e~~ld~~~~~~-G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al 254 (575)
.+.. ..|+... ..=|..+ .|... .....-+|-|.-=+.++....+..+...-+....+++|+
T Consensus 344 ~~~~-gdw~~~~~~~~~GGW---------------~fs~~-~~~~pd~d~Ta~~l~AL~~~~~~~~~~~~~~~~~i~~Av 406 (634)
T cd02892 344 LDNP-GDWKVKYRHLRKGGW---------------AFSTA-NQGYPDSDDTAEALKALLRLQELPPFGEKVSRERLYDAV 406 (634)
T ss_pred CCCC-CchhhhCCCCCCCCC---------------CCCCC-CCCCCCcCchHHHHHHHHHhhccCCcchhhHHHHHHHHH
Confidence 1111 1222110 0001111 12110 111234787777777766655443221123357899999
Q ss_pred HHHHhcccCC-CcccC
Q 048475 255 RLILSLCLSE-GFDTF 269 (575)
Q Consensus 255 ~wi~~~~~~d-Gf~~y 269 (575)
+||++.-+.| ||-.|
T Consensus 407 ~wLl~~Qn~dGgf~~y 422 (634)
T cd02892 407 DWLLGMQNSNGGFAAF 422 (634)
T ss_pred HHHHhccCCCCCEeee
Confidence 9999764444 46544
No 32
>TIGR01787 squalene_cyclas squalene/oxidosqualene cyclases. This family of enzymes catalyzes the cyclization of the triterpenes squalene or 2-3-oxidosqualene to a variety of products including hopene, lanosterol, cycloartenol, amyrin, lupeol and isomultiflorenol.
Probab=64.91 E-value=2.8e+02 Score=32.43 Aligned_cols=143 Identities=15% Similarity=0.040 Sum_probs=74.1
Q ss_pred CCCCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCCCCCcccchHHHHHHHhcCCC---h---HHHHHHHHHHH
Q 048475 98 GYEPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGE---P---EIVKNFILKTL 171 (575)
Q Consensus 98 ~~~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~---p---eiaR~~L~~ll 171 (575)
..++|+.+.++++.|++.++.- +.|.-.-.-. +++| |+..+..++...|. + ..++..+..|+
T Consensus 262 g~~d~p~~~~~l~~l~~~~~~~---~dg~~~q~~~-------s~vW--DTalai~AL~~ag~~~~~~~~~~i~ka~~wL~ 329 (621)
T TIGR01787 262 DGPNSPAFQKHLQRIDDYLWLQ---LDGMKMQGTG-------SQVW--DTAFAIQALRESGDHRLPEFHPALVKAHEWLL 329 (621)
T ss_pred CCCCCHHHHHHHHHHhhcEEEe---CCccEEecCC-------CcHH--HHHHHHHHHHHcCCCCccccCHHHHHHHHHHH
Confidence 3458999999999999986432 3353322112 2555 78888888766662 2 24666788888
Q ss_pred hhchhhhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHH
Q 048475 172 RLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQ 251 (575)
Q Consensus 172 ~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq 251 (575)
+.|-.+. .+|-.+. + .+ ....+--.|.. +-..+..||=|.==++++...... + .-...+.++
T Consensus 330 ~~Q~~~~-------~~g~~~~--~---~~--~~~pGgW~fs~-~~~~~PdvdDta~~~la~~l~~~~--~-~~~~~~~l~ 391 (621)
T TIGR01787 330 LSQIPDN-------PPGDWKV--Y---RH--NLKPGGWAFSF-LNCGYPDVDDTAVVALKAVLLLQE--D-EHVKRDRLR 391 (621)
T ss_pred HHhCCCC-------CCCchhh--h---CC--CCCCCcccCcc-CCCCCCCchhHHHHHHHHHHhhcC--c-ccccHHHHH
Confidence 7775431 0122111 0 00 00001112221 011123466554444333222221 2 123368899
Q ss_pred HHHHHHHhcccCC-CcccCC
Q 048475 252 KGMRLILSLCLSE-GFDTFP 270 (575)
Q Consensus 252 ~al~wi~~~~~~d-Gf~~yp 270 (575)
+|++|++..-+.| |+-.|.
T Consensus 392 ~a~~~Ll~~Qn~dGGw~ay~ 411 (621)
T TIGR01787 392 DAVNWILGMQSSNGGFAAYD 411 (621)
T ss_pred HHHHHHHHHcCCCCCEeeec
Confidence 9999999864444 455443
No 33
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=60.35 E-value=92 Score=36.45 Aligned_cols=134 Identities=16% Similarity=0.070 Sum_probs=74.8
Q ss_pred CCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCCCCCcccchHHHHHHHhcCC---ChHHHHHHHHHHHhhchh
Q 048475 100 EPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNG---EPEIVKNFILKTLRLQSW 176 (575)
Q Consensus 100 ~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g---~peiaR~~L~~ll~lQs~ 176 (575)
..++.+.++++.+++-++.-.| | .... + .=.++| |++.+..+++..| +...++.....|.+.|-.
T Consensus 284 ~~~~~~~~~l~~l~~~~~~~~~---g-~~~~-~-----~~s~vW--DTa~ai~AL~~ag~~~~~p~l~kA~~~L~~~Qi~ 351 (635)
T TIGR01507 284 QHDAFIKLGWEGIDLYGVELDD---S-WMFQ-A-----CVSPVW--DTALAVLALREAGLPADHDALVKAGEWLLDKQIT 351 (635)
T ss_pred CCCHHHHHHHHHHHHheEecCC---c-eEec-C-----CCCcHH--HHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhccc
Confidence 5688999999999888755322 2 2211 1 112555 7777777775555 344667778888876643
Q ss_pred hhhccccccCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCccccCcHHHHHHHHH
Q 048475 177 EKKIDRFQLGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRL 256 (575)
Q Consensus 177 e~~ld~~~~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al~w 256 (575)
.. +.|+. +.. ....+--.|+. .-..+..||-|..-+.++..- .+.+.. .....+++|++|
T Consensus 352 ~~--~~w~~---------~~~-----~~~~GGW~f~~-~~~~~pd~ddTa~~L~AL~~~--~~~~~~-~~~~~i~ra~~w 411 (635)
T TIGR01507 352 VP--GDWAV---------KRP-----NLEPGGWAFQF-DNVYYPDVDDTAVVVWALNGL--RLPDER-RRRDAMTKAFRW 411 (635)
T ss_pred CC--CCccc---------cCC-----CCCCCccCCCC-CCCCCCCchhHHHHHHHHHHc--CCCccc-cchHHHHHHHHH
Confidence 11 11110 000 01112223321 112256799999888887653 122221 225799999999
Q ss_pred HHhcccCCC
Q 048475 257 ILSLCLSEG 265 (575)
Q Consensus 257 i~~~~~~dG 265 (575)
|+..-+.||
T Consensus 412 Ll~~Qn~dG 420 (635)
T TIGR01507 412 IAGMQSSNG 420 (635)
T ss_pred HHHhcCCCC
Confidence 998655553
No 34
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=41.35 E-value=3.2e+02 Score=32.10 Aligned_cols=140 Identities=16% Similarity=0.075 Sum_probs=73.6
Q ss_pred CCCchHHHHHHHHHHhhccccC--------CcceeeecCCCCccccCCCCCcccchHHHHHHHhcCCCh------HHHHH
Q 048475 100 EPHPMVGEAWDALRRSLVYFRG--------KPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEP------EIVKN 165 (575)
Q Consensus 100 ~~~~~~~~a~e~L~~s~v~~~~--------~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~p------eiaR~ 165 (575)
++++.+.+|.+-|++.-|.-.| .+.|--+=.. ....|..++ |+..+..+++..+.+ +-++.
T Consensus 333 ~~~p~l~kA~~~L~~~Qi~~~~~w~~~~~~~~~GGW~f~~---~~~~~pd~d--dTa~~L~AL~~~~~~~~~~~~~~i~r 407 (635)
T TIGR01507 333 ADHDALVKAGEWLLDKQITVPGDWAVKRPNLEPGGWAFQF---DNVYYPDVD--DTAVVVWALNGLRLPDERRRRDAMTK 407 (635)
T ss_pred CCCHHHHHHHHHHHhhcccCCCCccccCCCCCCCccCCCC---CCCCCCCch--hHHHHHHHHHHcCCCccccchHHHHH
Confidence 4588999999999888754221 1111111000 012455554 777666666444321 47777
Q ss_pred HHHHHHhhchhhhhccccccCCCCCCCcccccccccCCCc-ccccCcCcc-cCCCcCCccchHHHHHHHHHHHHHhCCcc
Q 048475 166 FILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPIRNTE-TLIADFGES-AIGRVAPVDSGFWWIILLRAYTKSTGDSS 243 (575)
Q Consensus 166 ~L~~ll~lQs~e~~ld~~~~~~G~mP~sfkv~h~~~~~~~-~~~~dfGe~-~iGrv~~VDStlWfIIll~aY~~~TGD~~ 243 (575)
.+..++..|. .+|-.++.=+ .++.. ....+|+.. +.-....+|-|.-=+.++... |+..
T Consensus 408 a~~wLl~~Qn----------~dGgw~af~~-----~~~~~~l~~~~f~d~~~~~D~~~~d~Ta~~l~al~~~----g~~~ 468 (635)
T TIGR01507 408 AFRWIAGMQS----------SNGGWGAFDV-----DNTSDLLNHIPFCDFGAVTDPPTADVTARVLECLGSF----GYDD 468 (635)
T ss_pred HHHHHHHhcC----------CCCCEecccC-----CcchhHHhcCCccccccccCCCCccHHHHHHHHHHHh----CCCc
Confidence 8888898775 3444433100 00000 011223310 111234578776555555543 2211
Q ss_pred ccCcHHHHHHHHHHHhcccCCC
Q 048475 244 LAELPECQKGMRLILSLCLSEG 265 (575)
Q Consensus 244 fl~~p~vq~al~wi~~~~~~dG 265 (575)
..+.|++|++||.+.-..||
T Consensus 469 --~~~~i~rav~~L~~~Q~~dG 488 (635)
T TIGR01507 469 --AWPVIERAVEYLKREQEPDG 488 (635)
T ss_pred --hhHHHHHHHHHHHHccCCCC
Confidence 16899999999997655555
No 35
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=38.75 E-value=7.1e+02 Score=29.26 Aligned_cols=141 Identities=15% Similarity=0.013 Sum_probs=74.3
Q ss_pred CCCchHHHHHHHHHHhhccccCCcc-eeeecCCCCccccCCCCCcccchHHHHHHHhcCCC-h----HHHHHHHHHHHhh
Q 048475 100 EPHPMVGEAWDALRRSLVYFRGKPV-GTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGE-P----EIVKNFILKTLRL 173 (575)
Q Consensus 100 ~~~~~~~~a~e~L~~s~v~~~~~pv-GtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~-p----eiaR~~L~~ll~l 173 (575)
..|+.++++++.|++.++. .+. |.-.-.-++ .+| |+.++..++...|. . +..+..+..+.+.
T Consensus 273 ~~~p~~~k~l~~l~~~~~~---~~~~g~~~q~~~s-------~~W--DTala~~AL~e~g~~~~~~~~~l~kA~~wL~~~ 340 (634)
T TIGR03463 273 PDGPEVAAHLEGLEDYRYE---DDDRGLRYNGYNS-------SEW--DTAFAVQALAATPETAGRHRRMLERAARFLEAN 340 (634)
T ss_pred CCCHHHHHHHHHHHhhEEE---cCCCCEEEeeCCC-------Cch--hHHHHHHHHHHcCCCchhhhHHHHHHHHHHHHh
Confidence 4789999999999998733 233 321111111 223 67777777765552 1 3456788888887
Q ss_pred chhhhhccccc-cCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHHHHHHHHHHHHhCCc--cccCcHHH
Q 048475 174 QSWEKKIDRFQ-LGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDS--SLAELPEC 250 (575)
Q Consensus 174 Qs~e~~ld~~~-~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWfIIll~aY~~~TGD~--~fl~~p~v 250 (575)
|-.+..-| +. .-+. ...+--.|...- ..+..+|-|.=-+.++.... ..|+. +-+..+.+
T Consensus 341 Q~~~~~gd-~~~~~~~---------------~~~GGW~f~~~~-~~~pdsD~Ta~~L~Al~~~~-~~~~~~~~~~~~~~l 402 (634)
T TIGR03463 341 QMLEDTAE-PQRFFRD---------------PAKGGWCFSDGD-HGWPVSDCTAEALSASLVLE-PLGLNPEERVPQARL 402 (634)
T ss_pred cCCcCCCC-chhcCCC---------------CCCCccccccCC-CCCCccccHHHHHHHHHHHh-hcCCcccccccHHHH
Confidence 75443211 11 0000 011111121000 11334777765555555543 23332 22446889
Q ss_pred HHHHHHHHhcccCC-CcccCC
Q 048475 251 QKGMRLILSLCLSE-GFDTFP 270 (575)
Q Consensus 251 q~al~wi~~~~~~d-Gf~~yp 270 (575)
++|++||+..-+.| ||-.|.
T Consensus 403 ~~av~~Ll~~Qn~dGGw~~y~ 423 (634)
T TIGR03463 403 QDAVEFILSRQNEDGGFGTYE 423 (634)
T ss_pred HHHHHHHHHhcCCCCCEeccC
Confidence 99999999764444 565554
No 36
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=34.70 E-value=83 Score=26.88 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=19.5
Q ss_pred ccchHHHHHHHHHHHHHhCCccccCcHHHHHHHHHHHhc
Q 048475 222 VDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSL 260 (575)
Q Consensus 222 VDStlWfIIll~aY~~~TGD~~fl~~p~vq~al~wi~~~ 260 (575)
++.|..=+.++..+-.. .| .+.++++++||++.
T Consensus 72 ~~~t~~~l~~l~~~~~~-~~-----~~~~~~a~~~l~~~ 104 (113)
T PF13249_consen 72 VYTTYVALAALELLGRP-DD-----EEAVRKAVDWLLSC 104 (113)
T ss_dssp HHHHHHHHHHHHHHT-G-GC-----HTTHCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCC-cc-----cHHHHHHHHHHHHh
Confidence 55555555555333222 22 56789999999974
No 37
>PLN02993 lupeol synthase
Probab=29.93 E-value=1.1e+03 Score=28.73 Aligned_cols=139 Identities=12% Similarity=0.048 Sum_probs=73.9
Q ss_pred CCCchHHHHHHHHHHhhccccCCcceeeecCCCCccccCCCCCcccchHHHHHHHhcCCCh----HHHHHHHHHHHhhch
Q 048475 100 EPHPMVGEAWDALRRSLVYFRGKPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEP----EIVKNFILKTLRLQS 175 (575)
Q Consensus 100 ~~~~~~~~a~e~L~~s~v~~~~~pvGtlAa~d~~~~~~nY~~vFgRD~vISaL~~L~~g~p----eiaR~~L~~ll~lQs 175 (575)
..++.+.++++.+.+-++.- ..|.-.-. -=++|| |+..+..+++..|-+ ..++..+..+.+.|-
T Consensus 386 p~~~~~~~~l~ri~d~lw~~---edgm~~q~-------~gSqvW--DTa~a~qAl~~agl~~~~~~~l~kA~~~L~~~Qv 453 (763)
T PLN02993 386 PNGDHFKKHLARIPDYMWVA---EDGMKMQS-------FGSQLW--DTGFAIQALLASDLSDETDDVLRRGHNYIKKSQV 453 (763)
T ss_pred CCCHHHHHHHHHhhhcEEEe---CCceEEcC-------CCCchH--HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhc
Confidence 56788889998888866432 22322211 123777 888888888777643 456667888887776
Q ss_pred hhhhccccc-cCCCCCCCcccccccccCCCcccccCcCcccCCCcCCccchHHH---HHHHHHHHHHhCCc--cccCcHH
Q 048475 176 WEKKIDRFQ-LGEGVMPASFKVLHDPIRNTETLIADFGESAIGRVAPVDSGFWW---IILLRAYTKSTGDS--SLAELPE 249 (575)
Q Consensus 176 ~e~~ld~~~-~~~G~mP~sfkv~h~~~~~~~~~~~dfGe~~iGrv~~VDStlWf---IIll~aY~~~TGD~--~fl~~p~ 249 (575)
.+..-+.|+ .-+..=|... .|. ..-..+.-+|-|.== ++++..-- -|. +-+....
T Consensus 454 ~~~~~gdw~~~~r~~~~GgW---------------~Fs-~~~~gyp~sDdTAe~lka~l~l~~~~---~~~~~~~~~~~~ 514 (763)
T PLN02993 454 RENPSGDFKSMYRHISKGAW---------------TLS-DRDHGWQVSDCTAEALKCCMLLSMMP---ADVVGQKIDPEQ 514 (763)
T ss_pred cCCCCCchHhhCCCCCCCcC---------------cCc-cCCCCCCcCCchHHHHHHHHHHhhCc---cccccccchHHH
Confidence 543222222 1111111111 111 001113447766432 33443321 111 1233578
Q ss_pred HHHHHHHHHhcccCC-CcccC
Q 048475 250 CQKGMRLILSLCLSE-GFDTF 269 (575)
Q Consensus 250 vq~al~wi~~~~~~d-Gf~~y 269 (575)
+++|++||+..-+.| ||-.|
T Consensus 515 l~~av~wlL~mQn~dGG~aaf 535 (763)
T PLN02993 515 LYDSVNLLLSLQSENGGVTAW 535 (763)
T ss_pred HHHHHHHHHhhccCCCCEEee
Confidence 999999999874444 55444
No 38
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=27.90 E-value=1.6e+02 Score=32.28 Aligned_cols=76 Identities=17% Similarity=0.133 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCccccC---cHHHHHHHHHHHhcc--cCC-C-cccCCCccccCC-ccccCCch---HHHHHHHHHH
Q 048475 227 WWIILLRAYTKSTGDSSLAE---LPECQKGMRLILSLC--LSE-G-FDTFPTLLCADG-CCMIDRRM---ALFFMALRCA 295 (575)
Q Consensus 227 WfIIll~aY~~~TGD~~fl~---~p~vq~al~wi~~~~--~~d-G-f~~yptll~~Dg-~~miDrrm---aL~Y~ALr~a 295 (575)
--..+++.|+..|||.+|++ .|-+...-+...... +.+ | |. ...++=+|= ...+|-.. +..=..|+.|
T Consensus 109 dIa~a~~~Y~~~TgD~~~l~~~g~eil~etArfw~sr~~~~~~~g~y~-i~~V~GPDEY~~~V~NnayTN~ma~~~L~~A 187 (370)
T PF03632_consen 109 DIAYAIWQYYQATGDEEFLREYGAEILFETARFWASRVEYNEDTGRYE-IRNVTGPDEYHENVDNNAYTNAMAKWNLRLA 187 (370)
T ss_dssp HHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHHHHH-EEETTTTEEE---SB--SSTTS-SBS--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcHHHHHccCHHHHHHHHHHHHHheEEcCCCCeEE-ecccCchhcccCCCCCcHHHHHHHHHHHHHH
Confidence 34567899999999999997 444444444444321 221 2 21 111111111 12334333 7777889999
Q ss_pred HHhhccCC
Q 048475 296 LVLLKQDD 303 (575)
Q Consensus 296 a~L~~~~g 303 (575)
.++++..+
T Consensus 188 ~~~~~~~~ 195 (370)
T PF03632_consen 188 AEAAERLG 195 (370)
T ss_dssp HHHHTTS-
T ss_pred HHHHHHCc
Confidence 99999884
Done!