BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048482
(403 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 158/363 (43%), Gaps = 60/363 (16%)
Query: 41 GIGFSNYGEYWRQVRKICVLQLLSV--------RRVQS-----FQHVRDGEVSSLITKIR 87
GI FSN + W+++R+ ++ L + R+Q + +R S
Sbjct: 93 GIAFSN-AKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFI 151
Query: 88 LSCFNKGSPLNLLEMLLIASKEENTGQSNKFGELLRRLEEQFAAFCVGDTFL-----FLG 142
L C +P N++ ++ ++ + + +F +L+ L E +G +L F
Sbjct: 152 LGC----APCNVICSVIFHNRFDY--KDEEFLKLMESLHENVE--LLGTPWLQVYNNFPA 203
Query: 143 CLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVD-ILLQLRK 201
LD G+ L A I + ++EH N +DF+D L+++ +
Sbjct: 204 LLDYFPGIHKTLLKNADYIKNFIMEKVKEHQK--------LLDVNNPRDFIDCFLIKMEQ 255
Query: 202 DGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
+ L E + ++L + D+F AGT+TT+TTL +++ L+K+P R +EE+ V
Sbjct: 256 ENNL--EFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRH 313
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+ M+D +M Y V VR+R+Y I T +I + ++
Sbjct: 314 RSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSV 373
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
D + + P+ F FL+ + K D+ F+ F AG+R +G A +E+ + ++L
Sbjct: 374 LHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSIL 432
Query: 361 YWF 363
F
Sbjct: 433 QNF 435
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 156/394 (39%), Gaps = 46/394 (11%)
Query: 14 EMFKTHDIVISNRPKTTPANILLY--ECQGIGFSNYGEYWRQVRKICVLQLLSVR-RVQS 70
E TH ++RP IL + QG+ + YG WR+ R+ V L ++ +S
Sbjct: 67 EALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKS 126
Query: 71 FQHVRDGEVSSLITKIRLSCFNKGSPLNLLEMLL---IASKEENTGQSNKFGE--LLRRL 125
+ E + L P LL+ + IAS G+ ++ + LR L
Sbjct: 127 LEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASL--TCGRRFEYDDPRFLRLL 184
Query: 126 EEQFAAFCVGDTFL--FLGCLDVL---SGLIGRLNATARAIDALLDRVIEEHTNRAXXXX 180
+ FL L + VL L G++ +A LD ++ EH
Sbjct: 185 DLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEH-------R 237
Query: 181 XXXXXXXNKKDFVDILL--QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMA 238
+D + L + G + + +NL+ V+ D+F AG TT+TTL W +
Sbjct: 238 MTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLL 297
Query: 239 ELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV-------------------- 278
++ +P +R ++E+ V +M D M Y V
Sbjct: 298 LMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTS 357
Query: 279 -SVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGA 337
+ + + I T +I N ++ +D W++P F + FL++ + F+ F A
Sbjct: 358 RDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSA 416
Query: 338 GRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGK 371
GRR LG A +E+ +LL F +++P G+
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 160/365 (43%), Gaps = 59/365 (16%)
Query: 41 GIGFSNYGEYWRQVRKICVLQLLSV--------RRVQS-----FQHVRDGEVSSLITKIR 87
GI FSN G+ W+++R+ ++ L + RVQ + +R + S
Sbjct: 92 GIVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI 150
Query: 88 LSCFNKGSPLNLLEMLLIASKEENTGQSNKFGELLRRLEEQFAAFC-----VGDTFLFLG 142
L C +P N++ ++ + + Q +F L+ +L E V + F L
Sbjct: 151 LGC----APCNVICSIIFHKRFDYKDQ--QFLNLMEKLNENIEILSSPWIQVYNNFPAL- 203
Query: 143 CLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVD-ILLQLRK 201
LD G +L + + + ++EH N +DF+D L+++ K
Sbjct: 204 -LDYFPGTHNKLLKNVAFMKSYILEKVKEHQE--------SMDMNNPQDFIDCFLMKMEK 254
Query: 202 DGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
+ +E + ++L+ +D+F AGT+TT+TTL +A+ L+K+P + +EE+ V
Sbjct: 255 EKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR 314
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ M+D M Y V +++R+Y I T ++++ +
Sbjct: 315 NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTS 374
Query: 300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANL 359
+ D + + PE F FL+ + K + F+ F AG+R +G + A +E+ + ++
Sbjct: 375 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSI 433
Query: 360 LYWFD 364
L F+
Sbjct: 434 LQNFN 438
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 156/394 (39%), Gaps = 46/394 (11%)
Query: 14 EMFKTHDIVISNRPKTTPANILLY--ECQGIGFSNYGEYWRQVRKICVLQLLSVR-RVQS 70
E TH ++RP IL + QG+ + YG WR+ R+ V L ++ +S
Sbjct: 67 EALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKS 126
Query: 71 FQHVRDGEVSSLITKIRLSCFNKGSPLNLLEMLL---IASKEENTGQSNKFGE--LLRRL 125
+ E + L P LL+ + IAS G+ ++ + LR L
Sbjct: 127 LEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASL--TCGRRFEYDDPRFLRLL 184
Query: 126 EEQFAAFCVGDTFL--FLGCLDV---LSGLIGRLNATARAIDALLDRVIEEHTNRAXXXX 180
+ FL L + V + L G++ +A LD ++ EH
Sbjct: 185 DLAQEGLKEESGFLREVLNAVPVDRHIPALAGKVLRFQKAFLTQLDELLTEH-------R 237
Query: 181 XXXXXXXNKKDFVDILL--QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMA 238
+D + L + G + + +NL+ V+ D+F AG TT+TTL W +
Sbjct: 238 MTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLL 297
Query: 239 ELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV-------------------- 278
++ +P +R ++E+ V +M D M Y V
Sbjct: 298 LMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTS 357
Query: 279 -SVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGA 337
+ + + I T +I N ++ +D W++P F + FL++ + F+ F A
Sbjct: 358 RDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSA 416
Query: 338 GRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGK 371
GRR LG A +E+ +LL F +++P G+
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 157/365 (43%), Gaps = 59/365 (16%)
Query: 41 GIGFSNYGEYWRQVRKICVLQLLSV--------RRVQS-----FQHVRDGEVSSLITKIR 87
GI FSN G+ W+++R+ ++ L + RVQ + +R + S
Sbjct: 94 GIVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI 152
Query: 88 LSCFNKGSPLNLLEMLLIASKEENTGQS-----NKFGELLRRLEEQFAAFCVGDTFLFLG 142
L C +P N++ ++ + + Q K E ++ L + C F
Sbjct: 153 LGC----APCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNN----FSP 204
Query: 143 CLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVD-ILLQLRK 201
+D G +L + + + ++EH N +DF+D L+++ K
Sbjct: 205 IIDYFPGTHNKLLKNVAFMKSYILEKVKEHQE--------SMDMNNPQDFIDCFLMKMEK 256
Query: 202 DGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
+ +E + ++L+ +D+F AGT+TT+TTL +A+ L+K+P + +EE+ V
Sbjct: 257 EKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR 316
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ M+D M Y V +++R+Y I T ++++ +
Sbjct: 317 NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTS 376
Query: 300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANL 359
+ D + + PE F FL+ + K + F+ F AG+R +G + A +E+ + ++
Sbjct: 377 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSI 435
Query: 360 LYWFD 364
L F+
Sbjct: 436 LQNFN 440
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 152/368 (41%), Gaps = 61/368 (16%)
Query: 40 QGIGF-SNYGEYWRQVRKICVLQLLSV--------RRVQSFQH-----VRDGEVSSLITK 85
+G+G S+ G+ W+++R+ + L + RVQ H +R + S
Sbjct: 90 KGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPT 149
Query: 86 IRLSCFNKGSPLNLLEMLLIASKEENTGQSNKFGELLRRLEEQFAAFC-----VGDTFLF 140
L C +P N++ ++ + + Q+ F L++R E F V + F
Sbjct: 150 FILGC----APCNVICSVVFQKRFDYKDQN--FLTLMKRFNENFRILNSPWIQVCNNFPL 203
Query: 141 LGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVD---ILL 197
L +D G ++ + + ++EH N +DF+D I +
Sbjct: 204 L--IDCFPGTHNKVLKNVALTRSYIREKVKEH--------QASLDVNNPRDFIDCFLIKM 253
Query: 198 QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSV 257
+ KD +E + +NL + D+FVAGT+TT+TTL + + L+K+P + +EE+ V
Sbjct: 254 EQEKDNQ-KSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHV 312
Query: 258 AKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVN 296
+ M+D M Y V ++R+Y I T ++
Sbjct: 313 IGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMAL 372
Query: 297 AWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVI 356
++ D + + P F FL+ + K D+ F+ F AG+R G A +E+ +
Sbjct: 373 LTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFL 431
Query: 357 ANLLYWFD 364
+L F+
Sbjct: 432 TTILQNFN 439
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 190 KDFVDILLQLRKDGML----GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPT 245
+D D L++ ++ L +LS + + ++LD+F AG DT T + W++ LV NP
Sbjct: 252 RDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPR 311
Query: 246 SMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVSVR----------------WRDYNI-- 287
++ +EE+ +V + D + Y++ + RD ++
Sbjct: 312 VQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKG 371
Query: 288 --LAKTR-VIVNAWAIQRDPQGWDRPEDFLSDKFL--NSLVDCKSQDFEFISFGAGRRGY 342
+ K R V VN W I D + W P +FL ++FL + +D K + I FG G+R
Sbjct: 372 FYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKC 430
Query: 343 LGTSFALVEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLVV 386
+G + A EV +A LL ++++PLG ++M + GL +
Sbjct: 431 IGETIARWEVFLFLAILLQRVEFSVPLGV---KVDMTPIYGLTM 471
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 162/386 (41%), Gaps = 52/386 (13%)
Query: 24 SNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRV-QSFQHVRDGEVSSL 82
S RP+ +I +GI F++ G +W+ R++ + + Q + + E+S+L
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTL 135
Query: 83 ITKIRLSCFNKGSPLNLLEMLLIASKEE------NTGQSNKFGEL--LRRLEEQFAAFCV 134
+ + G +++ + +A NT N EL ++ E
Sbjct: 136 CDML---ATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLS 192
Query: 135 GDTFL-FLGCLDVLSG-LIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDF 192
D+ + + L + + +L + + + LL++++E + + +
Sbjct: 193 KDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSIT--------NM 244
Query: 193 VDILLQLR---KDGMLGAE-----LSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNP 244
+D L+Q + +G G + LS +++ I D+F AG +TT + ++W +A L+ NP
Sbjct: 245 LDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNP 304
Query: 245 TSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV---SVRWR------------------ 283
K+ EE+ + D ++ L+ +R R
Sbjct: 305 QVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIG 364
Query: 284 DYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSL-VDCKSQDFEFISFGAGRRGY 342
++ + T VI+N WA+ + + W +P+ F+ ++FLN S ++ FGAG R
Sbjct: 365 EFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSC 424
Query: 343 LGTSFALVEVEYVIANLLYWFDWNLP 368
+G A E+ ++A LL FD +P
Sbjct: 425 IGEILARQELFLIMAWLLQRFDLEVP 450
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 142/368 (38%), Gaps = 47/368 (12%)
Query: 36 LYECQGIGFSNYGEYWRQVRK--ICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNK 93
L++ G+ FSN GE +Q+R+ I L+ V + + +++ E LI +R +
Sbjct: 88 LFKGYGVAFSN-GERAKQLRRFSIATLRGFGVGKRGIEERIQE-EAGFLIDALRGTHGAN 145
Query: 94 GSPLNLLEMLL------IASKEENTGQSNKFGELLRRL--EEQFAAFCVGDTFLFLGCLD 145
P L + I + + +F LLR + QF A G +
Sbjct: 146 IDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLYEMFSS-- 203
Query: 146 VLSGLIGRLNATARAIDALLDRVIE--EHTNRAXXXXXXXXXXXNKKDFVDILL--QLRK 201
V+ L G + + L D + + EH R + +DF+D L +
Sbjct: 204 VMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPN-------SPRDFIDSFLIRMQEE 256
Query: 202 DGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
+ E NL L++F AGT+T +TTL + L+K+P + EE+ V
Sbjct: 257 EKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+D KM Y + V ++RD+ + T V ++
Sbjct: 317 RQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSV 376
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
RDP+ + P DF FL+ K D F+ F G+R G A +E+ ++
Sbjct: 377 LRDPRFFSNPRDFNPQHFLDKKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFFTTIM 435
Query: 361 YWFDWNLP 368
F + P
Sbjct: 436 QNFRFKSP 443
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 151/383 (39%), Gaps = 59/383 (15%)
Query: 36 LYECQGIGFSNYGEYWRQVRKICVLQL----LSVRRVQSFQHVRDGEVSSLITKIRLSCF 91
+ G+ F+N G W+ +R+ V + + R V+ + +++ E LI ++R S
Sbjct: 88 FFRGYGVIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVE--ERIQE-EAQCLIEELRKS-- 141
Query: 92 NKGSPLNLLEMLLIASKEENTGQSNKFG--------ELLRRLEEQFAAFCV-----GDTF 138
KG+ ++ L S N S FG E L+ L + F + G F
Sbjct: 142 -KGALMD--PTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLF 198
Query: 139 -LFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVDI-L 196
LF G L G ++ + I+A + +E+H +D +D L
Sbjct: 199 ELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRE--------TLDPSAPRDLIDTYL 250
Query: 197 LQLRKD-GMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR 255
L + K+ +E S NL L +F AGT+TT+TTL + ++K P +R E+
Sbjct: 251 LHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIE 310
Query: 256 SVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVI 294
V ++ D KM Y + V +R Y I T V
Sbjct: 311 QVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVF 370
Query: 295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEY 354
+ DP +++P+ F D FL++ K + FI F G+R LG A E+
Sbjct: 371 LILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFL 429
Query: 355 VIANLLYWFDWNLPLGKVEENLN 377
+L F P+ + +L
Sbjct: 430 FFTTILQNFSMASPVAPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 154/375 (41%), Gaps = 59/375 (15%)
Query: 36 LYECQGIGFSNYGEYWRQVRKICVLQL----LSVRRVQSFQHVRDGEVSSLITKIRLSCF 91
+++ G+ F+N GE WR +R+ + + + R V+ + +++ E L+ ++R S
Sbjct: 88 IFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVE--ERIQE-EARCLVEELRKS-- 141
Query: 92 NKGSPLNLLEMLLIASKEENTGQSNKFGE-------LLRRLEEQFAAFCVGDTFLFLGCL 144
KG+ L+ LL S N S FG+ + RL + F +
Sbjct: 142 -KGALLD--NTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVF 198
Query: 145 DVLSGLIGRLNATARAI-------DALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVDI-L 196
++ SG + T R I + + + +E+H RA N +DF+D+ L
Sbjct: 199 ELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKH--RATLDPS------NPRDFIDVYL 250
Query: 197 LQLRKDGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR 255
L++ KD +E NL +L +F AGT+TT+TTL + ++K P +R ++E+
Sbjct: 251 LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 310
Query: 256 SVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVI 294
V + D KM Y V ++R Y I T V
Sbjct: 311 QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVF 370
Query: 295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEY 354
+ DP+ ++ P F FL++ K + F+ F G+R LG A E+
Sbjct: 371 PVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFL 429
Query: 355 VIANLLYWFDWNLPL 369
+L F P+
Sbjct: 430 FFTTILQNFSIASPV 444
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 155/375 (41%), Gaps = 59/375 (15%)
Query: 36 LYECQGIGFSNYGEYWRQVRKICVLQL----LSVRRVQSFQHVRDGEVSSLITKIRLSCF 91
+++ G+ F+N GE WR +R+ + + + R V+ + +++ E L+ ++R S
Sbjct: 88 IFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVE--ERIQE-EARCLVEELRKS-- 141
Query: 92 NKGSPLNLLEMLLIASKEENTGQSNKFGE--------LLRRLE-----EQFAAFCVGDTF 138
KG+ L+ LL S N S FG+ LR L+ + F
Sbjct: 142 -KGALLD--NTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVF 198
Query: 139 -LFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVDI-L 196
LF G L G ++ + I+ + + +E+H RA N +DF+D+ L
Sbjct: 199 ELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH--RATLDPS------NPRDFIDVYL 250
Query: 197 LQLRKDGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR 255
L++ KD +E NL +L +F AGT+TT+TTL + ++K P +R ++E+
Sbjct: 251 LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 310
Query: 256 SVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVI 294
V + D KM Y V ++R Y I T V
Sbjct: 311 QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVF 370
Query: 295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEY 354
+ DP+ ++ P F FL++ K + F+ F G+R LG A E+
Sbjct: 371 PVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFL 429
Query: 355 VIANLLYWFDWNLPL 369
+L F P+
Sbjct: 430 FFTTILQNFSIASPV 444
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 155/375 (41%), Gaps = 59/375 (15%)
Query: 36 LYECQGIGFSNYGEYWRQVRKICVLQL----LSVRRVQSFQHVRDGEVSSLITKIRLSCF 91
+++ G+ F+N GE WR +R+ + + + R V+ + +++ E L+ ++R S
Sbjct: 88 IFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVE--ERIQE-EARCLVEELRKS-- 141
Query: 92 NKGSPLNLLEMLLIASKEENTGQSNKFGE--------LLRRLE-----EQFAAFCVGDTF 138
KG+ L+ LL S N S FG+ LR L+ + F
Sbjct: 142 -KGALLD--NTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVF 198
Query: 139 -LFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVDI-L 196
LF G L G ++ + I+ + + +E+H RA N +DF+D+ L
Sbjct: 199 ELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH--RATLDPS------NPRDFIDVYL 250
Query: 197 LQLRKDGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR 255
L++ KD +E NL +L +F AGT+TT+TTL + ++K P +R ++E+
Sbjct: 251 LRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 310
Query: 256 SVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVI 294
V + D KM Y V ++R Y I T V
Sbjct: 311 QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVF 370
Query: 295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEY 354
+ DP+ ++ P F FL++ K + F+ F G+R LG A E+
Sbjct: 371 PVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFL 429
Query: 355 VIANLLYWFDWNLPL 369
+L F P+
Sbjct: 430 FFTTILQNFSIASPV 444
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 155/375 (41%), Gaps = 59/375 (15%)
Query: 36 LYECQGIGFSNYGEYWRQVRKICVLQL----LSVRRVQSFQHVRDGEVSSLITKIRLSCF 91
+++ G+ F+N GE WR +R+ + + + R V+ + +++ E L+ ++R S
Sbjct: 88 IFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVE--ERIQE-EARCLVEELRKS-- 141
Query: 92 NKGSPLNLLEMLLIASKEENTGQSNKFGE--------LLRRLE-----EQFAAFCVGDTF 138
KG+ L+ LL S N S FG+ LR L+ + F
Sbjct: 142 -KGALLD--NTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVF 198
Query: 139 -LFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVDI-L 196
LF G L G ++ + I+ + + +E+H RA N +DF+D+ L
Sbjct: 199 ELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH--RATLDPS------NPRDFIDVYL 250
Query: 197 LQLRKDGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR 255
L++ KD +E NL +L +F AGT+TT+TTL + ++K P +R ++E+
Sbjct: 251 LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 310
Query: 256 SVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVI 294
V + D KM Y V ++R Y I T V
Sbjct: 311 QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVF 370
Query: 295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEY 354
+ DP+ ++ P F FL++ K + F+ F G+R LG A E+
Sbjct: 371 PVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFL 429
Query: 355 VIANLLYWFDWNLPL 369
+L F P+
Sbjct: 430 FFTTILQNFSIASPV 444
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 153/365 (41%), Gaps = 59/365 (16%)
Query: 41 GIGFSNYGEYWRQVRKICVLQLLSV--------RRVQS-----FQHVRDGEVSSLITKIR 87
GI FSN G+ W+++R+ ++ L + RVQ + +R + S
Sbjct: 94 GIVFSN-GKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI 152
Query: 88 LSCFNKGSPLNLLEMLLIASKEENTGQS-----NKFGELLRRLEEQFAAFCVGDTFLFLG 142
L C +P N++ ++ + + Q K E +R + + C F
Sbjct: 153 LGC----APCNVICSIIFQKRFDYKDQQFLNLMEKLNENIRIVSTPWIQICNN----FPT 204
Query: 143 CLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVD-ILLQLRK 201
+D G +L +++ + ++EH N +DF+D L+++ K
Sbjct: 205 IIDYFPGTHNKLLKNLAFMESDILEKVKEHQE--------SMDINNPRDFIDCFLIKMEK 256
Query: 202 DGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
+ +E + +NL D+ AGT+TT+TTL +A+ L+K+P + +EE+ V
Sbjct: 257 EKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGR 316
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ M+D M Y V V++R+Y I T ++ + +
Sbjct: 317 NRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTS 376
Query: 300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANL 359
+ D + + PE F FL+ + K ++ F+ F AG+R +G A +E+ + +
Sbjct: 377 VLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFI 435
Query: 360 LYWFD 364
L F+
Sbjct: 436 LQNFN 440
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 154/375 (41%), Gaps = 59/375 (15%)
Query: 36 LYECQGIGFSNYGEYWRQVRKICVLQL----LSVRRVQSFQHVRDGEVSSLITKIRLSCF 91
+++ G+ F+N GE WR +R+ + + + R V+ + +++ E L+ ++R S
Sbjct: 88 IFQGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVE--ERIQE-EARCLVEELRKS-- 141
Query: 92 NKGSPLNLLEMLLIASKEENTGQSNKFGE--------LLRRLE-----EQFAAFCVGDTF 138
KG+ L+ LL S N S FG+ LR L+ + F
Sbjct: 142 -KGALLD--NTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVF 198
Query: 139 -LFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRAXXXXXXXXXXXNKKDFVDI-L 196
LF G L G ++ + I+ + + +E+H RA N +DF+D+ L
Sbjct: 199 ELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH--RATLDPS------NPRDFIDVYL 250
Query: 197 LQLRKDGM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR 255
L++ KD +E NL +L +F AGT+TT+TTL + ++K P +R ++E+
Sbjct: 251 LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 310
Query: 256 SVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVI 294
V + D KM Y V ++R Y I T V
Sbjct: 311 QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVF 370
Query: 295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEY 354
+ DP+ ++ P F FL++ K + F+ F G+R G A E+
Sbjct: 371 PVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICAGEGIARTELFL 429
Query: 355 VIANLLYWFDWNLPL 369
+L F P+
Sbjct: 430 FFTTILQNFSIASPV 444
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 138/352 (39%), Gaps = 47/352 (13%)
Query: 36 LYECQGIGFSNYGEYWRQVRK--ICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNK 93
+++ G+ FSN GE +Q+R+ I L+ V + + +++ E LI +R +
Sbjct: 88 VFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQE-EAGFLIDALRGTGGAN 145
Query: 94 GSPLNLLEMLL------IASKEENTGQSNKFGELLRRL--EEQFAAFCVGDTFLFLGCLD 145
P L + I + + +F LLR + QF + G +
Sbjct: 146 IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLYEMFSS-- 203
Query: 146 VLSGLIGRLNATARAIDALLDRVIE--EHTNRAXXXXXXXXXXXNKKDFVDILL--QLRK 201
V+ L G + + L D + + EH R + +DF+D L +
Sbjct: 204 VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPN-------SPRDFIDSFLIRMQEE 256
Query: 202 DGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
+ E NL L++F AGT+T +TTL + L+K+P + EE+ V
Sbjct: 257 EKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+D KM Y++ V ++RD+ + T V ++
Sbjct: 317 RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSV 376
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEV 352
RDP + P+DF FLN K D F+ F G+R G A +E+
Sbjct: 377 LRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMEL 427
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 140/363 (38%), Gaps = 47/363 (12%)
Query: 36 LYECQGIGFSNYGEYWRQVRK--ICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNK 93
+++ G+ FSN GE +Q+R+ I L+ V + + +++ E LI +R +
Sbjct: 88 VFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQE-EAGFLIDALRGTGGAN 145
Query: 94 GSPLNLLEMLL------IASKEENTGQSNKFGELLRRLEE--QFAAFCVGDTFLFLGCLD 145
P L + I + + +F LLR + QF + G +
Sbjct: 146 IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSS-- 203
Query: 146 VLSGLIGRLNATARAIDALLDRVIE--EHTNRAXXXXXXXXXXXNKKDFVDILL--QLRK 201
V+ L G + + L D + + EH R + +DF+D L +
Sbjct: 204 VMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPN-------SPRDFIDSFLIRMQEE 256
Query: 202 DGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
+ E NL L +F+ GT+T +TTL + L+K+P + EE+ V
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+D KM Y++ V ++RD+ + T V ++
Sbjct: 317 RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSV 376
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
RDP + P+DF FLN K D F+ F G+R G A +E+ ++
Sbjct: 377 LRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVM 435
Query: 361 YWF 363
F
Sbjct: 436 QNF 438
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 142/352 (40%), Gaps = 47/352 (13%)
Query: 36 LYECQGIGFSNYGEYWRQVRK--ICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNK 93
+++ G+ FSN GE +Q+R+ I L+ V + + +++ E LI +R +
Sbjct: 88 VFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQE-EAGFLIDALRGTGGAN 145
Query: 94 GSPLNLLEMLL------IASKEENTGQSNKFGELLRRLEE--QFAAFCVGDTFLFLGCLD 145
P L + I + + +F LLR + QF + G +
Sbjct: 146 IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSS-- 203
Query: 146 VLSGLIGRLNATARAIDALLDRVIE--EHTNRAXXXXXXXXXXXNKKDFVD-ILLQLRKD 202
V+ L G + + L D + + EH R + +DF+D L++++++
Sbjct: 204 VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPN-------SPRDFIDSFLIRMQEE 256
Query: 203 GM-LGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
E NL L++F+ GT+T +TTL + L+K+P + EE+ V
Sbjct: 257 EKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+D KM Y++ V ++RD+ + T V ++
Sbjct: 317 RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSV 376
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEV 352
RDP + P+DF FLN K D F+ F G+R G A +E+
Sbjct: 377 LRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMEL 427
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 137/352 (38%), Gaps = 47/352 (13%)
Query: 36 LYECQGIGFSNYGEYWRQVRK--ICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNK 93
+++ G+ FSN GE +Q+R+ I L+ V + + +++ E LI +R +
Sbjct: 88 VFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQE-EAGFLIDALRGTGGAN 145
Query: 94 GSPLNLLEMLL------IASKEENTGQSNKFGELLRRLEE--QFAAFCVGDTFLFLGCLD 145
P L + I + + +F LLR + QF + G +
Sbjct: 146 IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSS-- 203
Query: 146 VLSGLIGRLNATARAIDALLDRVIE--EHTNRAXXXXXXXXXXXNKKDFVDILL--QLRK 201
V+ L G + + L D + + EH R + +DF+D L +
Sbjct: 204 VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPN-------SPRDFIDSFLIRMQEE 256
Query: 202 DGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
+ E NL L +FV GT+T +TTL + L+K+P + EE+ V
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+D KM Y++ V ++RD+ + T V ++
Sbjct: 317 RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSV 376
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEV 352
RDP + P+DF FLN K D F+ F G+R G A +E+
Sbjct: 377 LRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMEL 427
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 47/352 (13%)
Query: 36 LYECQGIGFSNYGEYWRQVRK--ICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNK 93
+++ G+ FSN GE +Q+R+ I L+ V + + +++ E LI +R +
Sbjct: 88 VFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQE-EAGFLIDALRGTGGAN 145
Query: 94 GSPLNLLEMLL------IASKEENTGQSNKFGELLRRLEE--QFAAFCVGDTFLFLGCLD 145
P L + I + + +F LLR + QF + G +
Sbjct: 146 IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSS-- 203
Query: 146 VLSGLIGRLNATARAIDALLDRVIE--EHTNRAXXXXXXXXXXXNKKDFVDILL--QLRK 201
V+ L G + + L D + + EH R + +DF+D L +
Sbjct: 204 VMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPN-------SPRDFIDSFLIRMQEE 256
Query: 202 DGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK 261
+ E NL L +F+ GT+T +TTL + L+K+P + EE+ V
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN 316
Query: 262 LNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWAI 300
+D KM Y++ V ++RD+ + T V ++
Sbjct: 317 RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSV 376
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEV 352
RDP + P+DF FLN K D F+ F G+R G A +E+
Sbjct: 377 LRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMEL 427
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 29/181 (16%)
Query: 207 AELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEV-RSVAKGK---- 261
+L + ++ ++D+F+ GT+TTA+TL WA+A L+ +P +R +EE+ R + G
Sbjct: 273 GQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSR 332
Query: 262 -----------LNIDMKDIEKMDYLKCVSVRWR--------DYNILAKTRVIVNAWAIQR 302
LN + ++ ++ + +++ R Y+I VI N
Sbjct: 333 VTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHL 392
Query: 303 DPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYW 362
D W++P +F D+FL + + ++FG G R LG S A +E+ V+A LL
Sbjct: 393 DETVWEQPHEFRPDRFLEPGANPSA-----LAFGCGARVCLGESLARLELFVVLARLLQA 447
Query: 363 F 363
F
Sbjct: 448 F 448
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 151/393 (38%), Gaps = 69/393 (17%)
Query: 22 VISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS 81
+ ++RP P + + + G+ S YG W R++ V SF++ G+ S
Sbjct: 79 IFADRP-CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAV---------NSFRYFGYGQ-KS 127
Query: 82 LITKI--RLSCFN------KGSPLNLLEML---------LIASKEENTGQSNKFGELLRR 124
+KI FN KG P + +++ LI E T + F ++
Sbjct: 128 FESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIEL 187
Query: 125 LEEQFAAFCVGDTFLF-----LGCLDVLSGLIGRLNATARAIDALLDRVIEEHT-NRAXX 178
E FL+ +G L G +L A + L R+IE+ + NR
Sbjct: 188 FSENVELAASASVFLYNAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 179 XXXXXXXXXNKKDFVDILLQLRKDGM--LGAELSQDNLKAVILDMFVAGTDTTATTLEWA 236
+ FVD L G + S++NL + ++ +AGT+TT L WA
Sbjct: 246 L---------PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWA 296
Query: 237 MAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV---SVRW----------- 282
+ + P + ++E+ + D KM Y + V +R+
Sbjct: 297 ILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHA 356
Query: 283 -------RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISF 335
R Y+I T VI N +++ D + W PE F ++FL+S ++ + F
Sbjct: 357 TSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPF 415
Query: 336 GAGRRGYLGTSFALVEVEYVIANLLYWFDWNLP 368
GRR LG A +E+ LL F + P
Sbjct: 416 SLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 190 KDFVDILLQLRKDG--MLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+D L + K G G + Q+ + ++ D+F AG DT T + W++ LV P
Sbjct: 257 RDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQ 316
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCVSVR----------------WRD-----YN 286
++ ++E+ +V + + D ++ YL+ + RD +
Sbjct: 317 RKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFY 376
Query: 287 ILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNS--LVDCKSQDFEFISFGAGRRGYLG 344
I K V VN W + DP+ W+ P +F ++FL + K + + FG G+R +G
Sbjct: 377 IPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIG 436
Query: 345 TSFALVEVEYVIANLLYWFDWNLPLG 370
A E+ +A LL ++++P G
Sbjct: 437 EVLAKWEIFLFLAILLQQLEFSVPPG 462
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 151/393 (38%), Gaps = 69/393 (17%)
Query: 22 VISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS 81
+ ++RP P + + + G+ S YG W R++ V SF++ G+ S
Sbjct: 79 IFADRP-CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAV---------NSFRYFGYGQ-KS 127
Query: 82 LITKI--RLSCFN------KGSPLNLLEML---------LIASKEENTGQSNKFGELLRR 124
+KI FN KG P + +++ LI E T + F ++
Sbjct: 128 FESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIEL 187
Query: 125 LEEQFAAFCVGDTFLF-----LGCLDVLSGLIGRLNATARAIDALLDRVIEEHT-NRAXX 178
E FL+ +G L G +L A + L R+IE+ + NR
Sbjct: 188 FSENVELAASASVFLYNAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 179 XXXXXXXXXNKKDFVDILLQLRKDGM--LGAELSQDNLKAVILDMFVAGTDTTATTLEWA 236
+ FVD L G + S++NL + ++ +AGT+TT L WA
Sbjct: 246 L---------PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWA 296
Query: 237 MAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV---SVRW----------- 282
+ + P + ++E+ + D KM Y + V +R+
Sbjct: 297 ILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHA 356
Query: 283 -------RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISF 335
R Y+I T VI N +++ D + W PE F ++FL+S ++ + F
Sbjct: 357 TSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPF 415
Query: 336 GAGRRGYLGTSFALVEVEYVIANLLYWFDWNLP 368
GRR LG A +E+ LL F + P
Sbjct: 416 SLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 188 NKKDFVDILL--QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPT 245
++ DF+ +++ Q K+ LS L A + AG +TT++ L + M EL +P
Sbjct: 246 HRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPD 305
Query: 246 SMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV--------------------SVRWRDY 285
++ +EE+ +V K + +M+YL V V
Sbjct: 306 VQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 365
Query: 286 NILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGT 345
I V++ ++A+ RDP+ W PE FL ++F D + + FG+G R +G
Sbjct: 366 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGM 424
Query: 346 SFALVEVEYVIANLLYWFDW 365
FAL+ ++ + +L F +
Sbjct: 425 RFALMNMKLALIRVLQNFSF 444
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 188 NKKDFVDILL--QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPT 245
++ DF+ +++ Q K+ LS L A + AG +TT++ L + M EL +P
Sbjct: 245 HRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPD 304
Query: 246 SMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV--------------------SVRWRDY 285
++ +EE+ +V K + +M+YL V V
Sbjct: 305 VQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 364
Query: 286 NILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGT 345
I V++ ++A+ RDP+ W PE FL ++F D + + FG+G R +G
Sbjct: 365 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGM 423
Query: 346 SFALVEVEYVIANLLYWFDW 365
FAL+ ++ + +L F +
Sbjct: 424 RFALMNMKLALIRVLQNFSF 443
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 188 NKKDFVDILL--QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPT 245
++ DF+ +++ Q K+ LS L A + AG +TT++ L + M EL +P
Sbjct: 247 HRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPD 306
Query: 246 SMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCV--------------------SVRWRDY 285
++ +EE+ +V K + +M+YL V V
Sbjct: 307 VQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 366
Query: 286 NILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGT 345
I V++ ++A+ RDP+ W PE FL ++F D + + FG+G R +G
Sbjct: 367 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGM 425
Query: 346 SFALVEVEYVIANLLYWFDW 365
FAL+ ++ + +L F +
Sbjct: 426 RFALMNMKLALIRVLQNFSF 445
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 26/190 (13%)
Query: 191 DFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRA 250
D+ IL +L D +++S +++KA + +M G DTT+ TL+W + E+ +N
Sbjct: 254 DYRGILYRLLGD----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDML 309
Query: 251 REEV---RSVAKGK----------LNIDMKDIEKMDYLKCVSVRW-------RDYNILAK 290
R EV R A+G L +K+ ++ + R+ RDY I AK
Sbjct: 310 RAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAK 369
Query: 291 TRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALV 350
T V V +A+ R+P + PE+F ++L+ D F + FG G R LG A +
Sbjct: 370 TLVQVAIYALGREPTFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAEL 427
Query: 351 EVEYVIANLL 360
E+ + N+L
Sbjct: 428 EMTIFLINML 437
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 26/190 (13%)
Query: 191 DFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRA 250
D+ IL +L D +++S +++KA + +M G DTT+ TL+W + E+ +N
Sbjct: 257 DYRGILYRLLGD----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDML 312
Query: 251 REEV---RSVAKGK----------LNIDMKDIEKMDYLKCVSVRW-------RDYNILAK 290
R EV R A+G L +K+ ++ + R+ RDY I AK
Sbjct: 313 RAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAK 372
Query: 291 TRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALV 350
T V V +A+ R+P + PE+F ++L+ D F + FG G R LG A +
Sbjct: 373 TLVQVAIYALGREPTFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAEL 430
Query: 351 EVEYVIANLL 360
E+ + N+L
Sbjct: 431 EMTIFLINML 440
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 190 KDFVDILL-QLRKDGMLGAEL-SQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+D D LL ++ K+ L + D + + D+F AGT+TT+TTL + + L+K P
Sbjct: 242 RDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIE 301
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYN 286
++ EE+ V +KD ++M Y+ V +R Y
Sbjct: 302 EKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYL 361
Query: 287 ILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTS 346
I T V+ ++ D Q + PE F + FLN K D+ F F G+R G
Sbjct: 362 IPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEG 420
Query: 347 FALVEVEYVIANLLYWFD 364
A +E+ ++ +L F+
Sbjct: 421 LARMELFLLLCAILQHFN 438
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 461
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 244 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 303
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 304 PVP-SYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 363 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 419
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 420 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 463
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 461
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V ++ +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTVWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L +EE L + + G V+ KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYELD-IEETLTL-KPKGFVIKAKSKKIPLGGIPS 461
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGKQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 244 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 303
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 304 PVP-SYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 363 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 419
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 420 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 463
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 244 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 303
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 304 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 363 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 419
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 420 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 463
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 461
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 191 DFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRA 250
D + LL+ + D G + + + ++ + G++T A+T+ W + L +P R
Sbjct: 243 DLLTALLEAKDDN--GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRI 300
Query: 251 REEVRSVAKGKLNIDMKDIEKMDYLKCV---SVRWRD-----------------YNILAK 290
R+EV +V G+ + +D+ K+ + V ++R R Y I A
Sbjct: 301 RDEVEAVTGGR-PVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAG 359
Query: 291 TRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALV 350
+I + +AIQRDP+ +D +F D++L + F AG+R F++
Sbjct: 360 ADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA-ANVPKYAMKPFSAGKRKCPSDHFSMA 418
Query: 351 EVEYVIANL 359
++ + A L
Sbjct: 419 QLTLITAAL 427
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG ++T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETL-LLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG ++T+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYEL-DIKETL-LLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L + + LVKNP +++A EE V
Sbjct: 247 KDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVD 306
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 307 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQ 365
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 366 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 422
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 423 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 466
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG ++T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L E L + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELDIKETQL--LKPEGFVVKAKSKKIPLGGIPS 460
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R G FAL E V+
Sbjct: 361 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACPGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 461
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ + G +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACEGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ + G +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ + G +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ + G +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ + G +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTVWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 461
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ + G +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPLGGIPS 460
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 417 MLKHFDFEDHTNYEL-DIKETL-VLKPEGFVVKAKSKKIPLGGIPS 460
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 242 KDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 301
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 302 PVP-SYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 361 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 417
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPLHPVPT 397
+L FD+ N L ++E L + + G VV KK+PL +P+
Sbjct: 418 MLKHFDFEDHTNYEL-DIKETL-VLKPEGFVVKAKSKKIPLGGIPS 461
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 206 GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNID 265
GA L +N+ A I D+F A DT +T L+W + + P R + E+ V
Sbjct: 272 GARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPC 331
Query: 266 MKDIEKMDYLKCV---SVRWRD------------------YNILAKTRVIVNAWAIQRDP 304
M D + Y+ ++R+ Y+I T V VN W++ DP
Sbjct: 332 MGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDP 391
Query: 305 QGWDRPEDFLSDKFL--NSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYW 362
W PE+F +FL + L++ K + F G+R +G + +++ I+ L +
Sbjct: 392 LKWPNPENFDPARFLDKDGLIN-KDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQ 450
Query: 363 FDW 365
D+
Sbjct: 451 CDF 453
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F +G G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPYGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 194 DILLQL--RKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAR 251
D+L Q+ KD G L N+ I+ +AG +TT+ L +A+ LVKNP +++
Sbjct: 232 DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVA 291
Query: 252 EEVRSVAKGKLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAK 290
EE V + K ++++ Y+ V +V +Y +
Sbjct: 292 EEATRVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKG 350
Query: 291 TRVIVNAWAIQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFAL 349
V+V + RD W D E+F ++F N F FG G+R +G FAL
Sbjct: 351 DEVMVLIPQLHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFAL 407
Query: 350 VEVEYVIANLLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
E V+ +L FD+ N L ++E L + + G VV KK+PL
Sbjct: 408 HEATLVLGMMLKHFDFEDHTNYEL-DIKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 193 VDILLQLRKDGML--GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRA 250
+D +LQ D G L+ D + +++ + +AG T++TT W L ++ T K+
Sbjct: 230 IDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKC 289
Query: 251 REEVRSVAKGKLNI----DMKDIEKMDYLKCV--SVRWRD-----------------YNI 287
E ++V L +KD+ +D +C+ ++R R Y I
Sbjct: 290 YLEQKTVCGENLPPLTYDQLKDLNLLD--RCIKETLRLRPPIMIMMRMARTPQTVAGYTI 347
Query: 288 LAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSF 347
+V V+ QR W DF D++L + F ++ FGAGR +G +F
Sbjct: 348 PPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD-NPASGEKFAYVPFGAGRHRCIGENF 406
Query: 348 ALVEVEYVIANLLYWFDWNL 367
A V+++ + + +L ++++L
Sbjct: 407 AYVQIKTIWSTMLRLYEFDL 426
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG + T+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F FG G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 212 DNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEV---RSVAKGK------- 261
+++KA I +M G +TT+ TL+W + E+ ++ + REEV R A+G
Sbjct: 275 EDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQM 334
Query: 262 ---LNIDMKDIEKMDYLKCVSVRW-------RDYNILAKTRVIVNAWAIQRDPQGWDRPE 311
L +K+ ++ + R+ +DY I AKT V V +A+ RDP + P+
Sbjct: 335 VPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPD 394
Query: 312 DFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
F ++L+ D F + FG G R +G A +E+ + ++L
Sbjct: 395 KFDPTRWLSK--DKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHIL 441
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F +G G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPWGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F G G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPHGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 209 LSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKD 268
LS+ L A + ++ +A +TTA +L W + L +NP + +R +EV+SV +D
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED 338
Query: 269 IEKMDYLK-CVSVRWR-------------------DYNILAKTRVIVNAWAIQRDPQGWD 308
+ M YLK C+ R +Y + T + +N + ++
Sbjct: 339 LRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFE 398
Query: 309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLP 368
F +++L + K F + FG G+R +G A +++ + ++ +D
Sbjct: 399 DSHKFRPERWLQK--EKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI--- 453
Query: 369 LGKVEENLNMFEVNGLVVHKKLPL 392
+ E + M + LV ++LP+
Sbjct: 454 VATDNEPVEMLHLGILVPSRELPI 477
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 201 KDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKG 260
KD G L +N++ I+ +AG +TT+ L +A+ LVKNP +++A EE V
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 261 KLNIDMKDIEKMDYLKCV---------------------SVRWRDYNILAKTRVIVNAWA 299
+ K ++++ Y+ V +V +Y + ++V
Sbjct: 301 PVP-SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 300 IQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN 358
+ RD W D E+F ++F N F G G+R +G FAL E V+
Sbjct: 360 LHRDKTIWGDDVEEFRPERFENP---SAIPQHAFKPAGNGQRACIGQQFALHEATLVLGM 416
Query: 359 LLYWFDW----NLPLGKVEENLNMFEVNGLVVH---KKLPL 392
+L FD+ N L ++E L + + G VV KK+PL
Sbjct: 417 MLKHFDFEDHTNYELD-IKETLTL-KPEGFVVKAKSKKIPL 455
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 35/232 (15%)
Query: 191 DFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRA 250
DF L+ K G +L+++N+ IL+M +A DT + +L + + + K+P +
Sbjct: 277 DFATELILAEKRG----DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAI 332
Query: 251 REEVRSVAKGKLNIDMKDIEK-----------MDYLKCVSVRWRD---------YNILAK 290
+E+++V G+ +I + DI+K M Y V + R Y +
Sbjct: 333 IKEIQTVI-GERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKG 391
Query: 291 TRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFE-FISFGAGRRGYLGTSFAL 349
T +I+N + R + + +P +F + F K+ + F FG G RG G A+
Sbjct: 392 TNIILNIGRMHR-LEFFPKPNEFTLENF------AKNVPYRYFQPFGFGPRGCAGKYIAM 444
Query: 350 VEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP 401
V ++ ++ LL F G+ E++ +++ L +H + + +++P
Sbjct: 445 VMMKAILVTLLRRFHVKTLQGQCVESIQ--KIHDLSLHPDETKNMLEMIFTP 494
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 23/204 (11%)
Query: 188 NKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+++D + ILL R D LS LK IL + AG +T + L L ++
Sbjct: 220 SEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIR 277
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCV--------------------SVRWRDYNI 287
+R R+E + + + + ++KM YL V +++ ++
Sbjct: 278 ERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHF 336
Query: 288 LAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSF 347
V DP + PE F ++F + F + FG G R LG F
Sbjct: 337 PKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEF 396
Query: 348 ALVEVEYVIANLLYWFDWNLPLGK 371
A +E++ L+ FDW L G+
Sbjct: 397 ARLEMKLFATRLIQQFDWTLLPGQ 420
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 204 MLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLN 263
+L AELS + +KA +++ DTTA L + EL +NP + R+E + A
Sbjct: 268 LLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISE 327
Query: 264 IDMKDIEKMDYLKCV--------------------SVRWRDYNILAKTRVIVNAWAIQRD 303
K ++ L+ + ++Y+I A T V V +++ R+
Sbjct: 328 HPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRN 387
Query: 304 PQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLG 344
+ RPE + ++L+ + ++F + FG G R LG
Sbjct: 388 AALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 188 NKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+ +D +D+L+ ++ + S D + + + M AG T++ T W + EL+++ +
Sbjct: 221 SDRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCV-------------------------SVRW 282
+E+ + ++ + ++ L+ V R
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 283 RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGY 342
+ +++A + I N R P+ + P DF+ ++ + + +I FGAGR
Sbjct: 340 HEGDLVAASPAISN-----RIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 343 LGTSFALVEVEYVIANLLYWFDWNL 367
+G +FA+++++ + + LL +++ +
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 188 NKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+ +D +D+L+ ++ + S D + + + M AG T++ T W + EL+++ +
Sbjct: 221 SDRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCV-------------------------SVRW 282
+E+ + ++ + ++ L+ V R
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 283 RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGY 342
+ +++A + I N R P+ + P DF+ ++ + + +I FGAGR
Sbjct: 340 HEGDLVAASPAISN-----RIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 343 LGTSFALVEVEYVIANLLYWFDWNL 367
+G +FA+++++ + + LL +++ +
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 188 NKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+ +D +D+L+ ++ + S D + + + M AG T++ T W + EL+++ +
Sbjct: 221 SDRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCV-------------------------SVRW 282
+E+ + ++ + ++ L+ V R
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 283 RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGY 342
+ +++A + I N R P+ + P DF+ ++ + + +I FGAGR
Sbjct: 340 HEGDLVAASPAISN-----RIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 343 LGTSFALVEVEYVIANLLYWFDWNL 367
+G +FA+++++ + + LL +++ +
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 188 NKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+ +D +D+L+ ++ + S D + + + M AG T++ T W + EL+++ +
Sbjct: 221 SDRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCV-------------------------SVRW 282
+E+ + ++ + ++ L+ V R
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 283 RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGY 342
+ +++A + I N R P+ + P DF+ ++ + + +I FGAGR
Sbjct: 340 HEGDLVAASPAISN-----RIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 343 LGTSFALVEVEYVIANLLYWFDWNL 367
+G +FA+++++ + + LL +++ +
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 191 DFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRA 250
D + IL +GM LS ++ A+IL++ +A T+ TL + L+ NP
Sbjct: 239 DLISILCTSEYEGM---ALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP------ 289
Query: 251 REEVRSVAKGKLNIDMKDIEKMDYLKCVSVRWRDYN---------ILAKTRVIVNAWAIQ 301
E++ V + + E + Y V + R + I T V A
Sbjct: 290 -EQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAAN 348
Query: 302 RDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
RDP+ +++P+ F + + S ++FG+G +GT+FA E+E ++AN++
Sbjct: 349 RDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIE-IVANIV 406
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 206 GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELV--KNPTSMKRAREEVRSVAKGKLN 263
G +SQ + +I+ AG T+ T W++ L+ +N + + +E+ +LN
Sbjct: 245 GTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFP-AQLN 303
Query: 264 IDMKDIEKMDYL-KCV--SVRWRDYNILAKTRVIVNAWAIQRD--PQG----------WD 308
D +E+M + +C S+R RD ++ R ++ + + P+G
Sbjct: 304 YD-NVMEEMPFAEQCARESIR-RDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQ 361
Query: 309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLP 368
E F + + N + K D F FGAG +G F L++V+ V+A +L +D+ L
Sbjct: 362 DEEAFPNPREWNPERNMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL- 420
Query: 369 LGKVEE 374
LG + E
Sbjct: 421 LGPLPE 426
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 206 GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELV--KNPTSMKRAREEVRSVAKGKLN 263
G +S + +I+ AG T+ T W+M L+ KN + + +E+ +LN
Sbjct: 259 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFP-AQLN 317
Query: 264 IDMKDIEKMDYL-KCV--SVRWRDYNIL-----AKTRVIVNAWAIQRDPQGWDRP----- 310
D +++M + +CV S+R RD +L K V V ++ + + P
Sbjct: 318 YD-NVMDEMPFAERCVRESIR-RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 375
Query: 311 --EDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNL 367
E F + + + D K D FI FGAG +G FAL++V+ ++A +D+ L
Sbjct: 376 DEEAFPNPRLWDPERDEKV-DGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 206 GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELV--KNPTSMKRAREEVRSVAKGKLN 263
G +S + +I+ AG T+ T W+M L+ KN + + +E+ +LN
Sbjct: 250 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFP-AQLN 308
Query: 264 IDMKDIEKMDYL-KCV--SVRWRDYNIL-----AKTRVIVNAWAIQRDPQGWDRP----- 310
D +++M + +CV S+R RD +L K V V ++ + + P
Sbjct: 309 YD-NVMDEMPFAERCVRESIR-RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 366
Query: 311 --EDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNL 367
E F + + + D K D FI FGAG +G FAL++V+ ++A +D+ L
Sbjct: 367 DEEAFPNPRLWDPERDEKV-DGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 206 GAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELV--KNPTSMKRAREEVRSVAKGKLN 263
G +S + +I+ AG T+ T W+M L+ KN + + +E+ +LN
Sbjct: 244 GTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFP-AQLN 302
Query: 264 IDMKDIEKMDYL-KCV--SVRWRDYNIL-----AKTRVIVNAWAIQRDPQGWDRP----- 310
D +++M + +CV S+R RD +L K V V ++ + + P
Sbjct: 303 YD-NVMDEMPFAERCVRESIR-RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHH 360
Query: 311 --EDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNL 367
E F + + + D K D FI FGAG +G FAL++V+ ++A +D+ L
Sbjct: 361 DEEAFPNPRLWDPERDEKV-DGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 215 KAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSV---AKGKLNI------- 264
K ++ ++ + +T T W++ ++++NP +MK A EEV+ A K+++
Sbjct: 260 KTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICL 318
Query: 265 ---DMKDIEKMDYLKCVSVRWR--------------------DYNILAKTRVIVNAWAIQ 301
++ D+ +D + S+R YNI + + +
Sbjct: 319 SQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH 378
Query: 302 RDPQGWDRPEDFLSDKFLNSLVDCKSQ--------DFEFISFGAGRRGYLGTSFALVEVE 353
DP+ + P F D++L+ K+ + ++ FG+G G FA+ E++
Sbjct: 379 LDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIK 438
Query: 354 YVIANLLYWFDWNLPLGKVE 373
+ +L +F+ L G+ +
Sbjct: 439 QFLILMLSYFELELIEGQAK 458
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 215 KAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSV---AKGKLNI------- 264
K ++ ++ + +T T W++ ++++NP +MK A EEV+ A K+++
Sbjct: 260 KTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICL 318
Query: 265 ---DMKDIEKMDYLKCVSVRWR--------------------DYNILAKTRVIVNAWAIQ 301
++ D+ +D + S+R YNI + + +
Sbjct: 319 SQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH 378
Query: 302 RDPQGWDRPEDFLSDKFLNSLVDCKSQ--------DFEFISFGAGRRGYLGTSFALVEVE 353
DP+ + P F D++L+ K+ + ++ FG+G G FA+ E++
Sbjct: 379 LDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIK 438
Query: 354 YVIANLLYWFDWNLPLGKVE 373
+ +L +F+ L G+ +
Sbjct: 439 QFLILMLSYFELELIEGQAK 458
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 26/168 (15%)
Query: 188 NKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSM 247
+D + ++L G++ S++ + + ++ G +T A+ + A+ L+ +P +
Sbjct: 201 GGEDLLALMLDAHDRGLM----SRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQL 256
Query: 248 KRAREEVRSVAKGKLNIDMKDIEKMDYLKCVSVRWRDYNI-------LAKTRVIVNAWAI 300
R +A+ +++ + D + R D ++ V+V A A
Sbjct: 257 DLLRRRPDLLAQA-----VEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAA 311
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFA 348
RDP+ +DRP+DF D + +SFGAG R LG+ A
Sbjct: 312 NRDPRRYDRPDDF----------DIERDPVPSMSFGAGMRYCLGSYLA 349
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 189 KKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMK 248
+ D + +LLQ DG + LS L A++ + AGTDTT + +A+ L+++P +++
Sbjct: 222 ENDVLTMLLQAEADG---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE 278
Query: 249 RAREEVRSVAKGKLNIDMKDIEKMD-YLKCVSVRWR----DY---NILAKTRVIVNAWAI 300
+ E G + + ++ + D L+ +VR+ +Y +I V + +
Sbjct: 279 LVKAE-----PGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSA 333
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
RD + RP+ F D + +++G G G S A +E E + +
Sbjct: 334 LRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIF 383
Query: 361 YWF 363
F
Sbjct: 384 RRF 386
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 189 KKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMK 248
+ D + +LLQ DG + LS L A++ + AGTDTT + +A+ L+++P +++
Sbjct: 222 ENDVLTMLLQAEADG---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE 278
Query: 249 RAREEVRSVAKGKLNIDMKDIEKMD-YLKCVSVRWR----DY---NILAKTRVIVNAWAI 300
+ E G + + ++ + + L+ +VR+ +Y +I V + +
Sbjct: 279 LVKAE-----PGLMRNALDEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSA 333
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
RD + RP+ F D + +++G G G S A +E E + +
Sbjct: 334 LRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIF 383
Query: 361 YWF 363
F
Sbjct: 384 RRF 386
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 220 DMFVAGTDTTATTLEWAMAELVKNP---TSMKRAREEVRSVAKGKLNIDMKDIEKMDYLK 276
++ + G +TT + A+ L P T+++ +V +V + L + +
Sbjct: 250 NVLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDTVVEEVLRWTSPAMHVLRVTT 309
Query: 277 C-VSVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISF 335
V++ RD + + T V+ A RDP +D P+ FL + N I+F
Sbjct: 310 ADVTINGRD--LPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKPN----------RHITF 357
Query: 336 GAGRRGYLGTSFALVEVEYVI 356
G G LG++ A +E+ V+
Sbjct: 358 GHGMHHCLGSALARIELSVVL 378
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 198 QLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSV 257
QL+ +G + AE+ + +A++L ++V + W M L+ +P +++ REE++
Sbjct: 243 QLQDEG-IDAEMQR---RAMLLQLWVTQGNAGPAAF-WVMGYLLTHPEALRAVREEIQGG 297
Query: 258 AKGKLNIDMKDIEKMDYLKCVSVRW---------------------RDYNILAKTRVIVN 296
+L K+ D + ++R ++Y++ R+ V
Sbjct: 298 KHLRLEERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVF 357
Query: 297 AW-AIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDF------EFISFGAGRRGYL--GTSF 347
+ + Q DPQ +PE F D+FLN+ K F ++ S G L G F
Sbjct: 358 PFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHF 417
Query: 348 ALVEVEYVIANLLYWFDWNL 367
A+ ++ ++ +L FD L
Sbjct: 418 AVHAIKELVFTILTRFDVEL 437
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 35/181 (19%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAM----------AELVKN 243
D++ +L D ++ ++ + L + + AG +TT + + + AEL K+
Sbjct: 219 DLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKD 278
Query: 244 PTSMKRAREE---VRSVAKG-KLNIDMKDIEKMDYLKCVSVRWRDYNILAKTRVIVNAWA 299
P M A +E V SVA L + +DIE +S R + A VI
Sbjct: 279 PDLMPAAVDELLRVLSVADSIPLRVAAEDIE-------LSGR----TVPADDGVIALLAG 327
Query: 300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANL 359
DP+ +D PE VD D ++FG G +G A +E+E + L
Sbjct: 328 ANHDPEQFDDPE----------RVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETL 377
Query: 360 L 360
L
Sbjct: 378 L 378
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 207 AELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDM 266
+L D + + L + VAG +TT + L+++P + + +V+ G + +
Sbjct: 226 GDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVS-GVVEELL 284
Query: 267 KDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLV 323
+ D++ ++ + I A V+V+ + RD + ++ P+ F
Sbjct: 285 RFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIF---------- 334
Query: 324 DCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
D + + FG G LG + A E+E + L
Sbjct: 335 DARRNARHHVGFGHGIHQCLGQNLARAELEIALGGLF 371
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 283 RDYNILAKTRVIVNAW-AIQRDPQGWDRPEDFLSDKFLNS--------LVDCKSQDFEFI 333
R++N+ R+++ + + QRDP+ + PE F ++FLN D K +
Sbjct: 351 REFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNM 410
Query: 334 SFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPLH 393
+GAG LG S+A+ ++ + +L D L VE + F+++ P H
Sbjct: 411 PWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVE--IPEFDLSRYGFGLMQPEH 468
Query: 394 PVPTLYSPYP 403
VP Y P
Sbjct: 469 DVPVRYRIRP 478
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 283 RDYNILAKTRVIVNAW-AIQRDPQGWDRPEDFLSDKFLNS--------LVDCKSQDFEFI 333
R++N+ R+++ + + QRDP+ + PE F ++FLN D K +
Sbjct: 363 REFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNM 422
Query: 334 SFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPLH 393
+GAG LG S+A+ ++ + +L D L VE + F+++ P H
Sbjct: 423 PWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVE--IPEFDLSRYGFGLMQPEH 480
Query: 394 PVPTLYSPYP 403
VP Y P
Sbjct: 481 DVPVRYRIRP 490
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 20/159 (12%)
Query: 207 AELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDM 266
E++ + ++ + AG DTT + A+ L + P R R + S+A+ +
Sbjct: 234 GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP-SLARNAFEEAV 292
Query: 267 K-DIEKMDYLKCVSVRWRDYNILAKT-----RVIVNAWAIQRDPQGWDRPEDFLSDKFLN 320
+ + + + + RD + T +V++ + RDP+ WD P+ +
Sbjct: 293 RFESPVQTFFRTTT---RDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY------- 342
Query: 321 SLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANL 359
D + + FG+G +G A +E E V+A L
Sbjct: 343 ---DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAAL 378
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 28/165 (16%)
Query: 206 GAELSQDNLKAVILDMFVAGTDTTATTLEWA----------MAELVKNPTSMKRAREEVR 255
G+ LS D + + + AG +TT L A + EL P S A EE+
Sbjct: 236 GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPAAVEELM 295
Query: 256 SVAKGKLNIDMKDIEKMDYLKCVSVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLS 315
+ + ++ + + Y +R D++I +RV+ + RDP + P+
Sbjct: 296 -----RYDPPVQAVTRWAY---EDIRLGDHDIPRGSRVVALLGSANRDPARFPDPD---- 343
Query: 316 DKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
++D + FG G LG + A E E + LL
Sbjct: 344 ------VLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 189 KKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMK 248
++D + +LL+ R+ +L+++ + + + +AG +TT + ++ L+++P +
Sbjct: 203 QQDMISMLLKGREKD----KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLL 258
Query: 249 RAREEVRSVAKGKLNIDMKDIEKMDYLKCVS-------VRWRDYNILAKT-----RVIVN 296
+ RE N D+ + L+ S V D +I T +V +
Sbjct: 259 KLRE----------NPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLL 308
Query: 297 AWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVI 356
A RDP + P+ F D +SFG G LG+S A +E + I
Sbjct: 309 LGAANRDPSIFTNPDVF----------DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAI 358
Query: 357 ANLL 360
LL
Sbjct: 359 NTLL 362
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 34/180 (18%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAR-- 251
D++ L + G + + A + + AG DTT+++ A+ L +NP + A+
Sbjct: 237 DVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD 296
Query: 252 ---------EEVRSVA--KGKLNIDMKDIEKMDYLKCVSVRWRDYNILAKTRVIVNAWAI 300
E VR A K + + D E R NI R++++ +
Sbjct: 297 PALIPRLVDEAVRWTAPVKSFMRTALADTEV-----------RGQNIKRGDRIMLSYPSA 345
Query: 301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
RD + + P++F +F N + FG G LG A +E++ LL
Sbjct: 346 NRDEEVFSNPDEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELL 395
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 32/184 (17%)
Query: 196 LLQLRK----DGMLGAELSQDNLKAVILDMF---------VAGTDTTATTLEWAMAELVK 242
L+Q R+ D ++ A ++ ++ V+ DMF +A DTTA + A L+
Sbjct: 196 LVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLD 255
Query: 243 NPTSMKRAREEVRSVAKG------KLNIDMKDIEKMDYLKCVSVRWRDYNILAKTRVIVN 296
+P + RE+ V L I E+ + V I +V+ +
Sbjct: 256 SPDQLALLREDPSLVGNAVEELLRYLTIGQFGGER---VATRDVELGGVRIAKGEQVVAH 312
Query: 297 AWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVI 356
A DP + PE F D + ++FG G +G A +E++ V
Sbjct: 313 VLAADFDPAFVEEPERF----------DITRRPAPHLAFGFGAHQCIGQQLARIELQIVF 362
Query: 357 ANLL 360
L
Sbjct: 363 ETLF 366
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 32/184 (17%)
Query: 196 LLQLRK----DGMLGAELSQDNLKAVILDMF---------VAGTDTTATTLEWAMAELVK 242
L+Q R+ D ++ A ++ ++ V+ DMF +A DTTA + A L+
Sbjct: 196 LVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLD 255
Query: 243 NPTSMKRAREEVRSVAKG------KLNIDMKDIEKMDYLKCVSVRWRDYNILAKTRVIVN 296
+P + RE+ V L I E+ + V I +V+ +
Sbjct: 256 SPDQLALLREDPSLVGNAVEELLRYLTIGQFGGER---VATRDVELGGVRIAKGEQVVAH 312
Query: 297 AWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVI 356
A DP + PE F D + ++FG G +G A +E++ V
Sbjct: 313 VLAADFDPAFVEEPERF----------DITRRPAPHLAFGFGAHQCIGQQLARIELQIVF 362
Query: 357 ANLL 360
L
Sbjct: 363 ETLF 366
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 32/184 (17%)
Query: 196 LLQLRK----DGMLGAELSQDNLKAVILDMF---------VAGTDTTATTLEWAMAELVK 242
L+Q R+ D ++ A ++ ++ V+ DMF +A DTTA + A L+
Sbjct: 196 LVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLD 255
Query: 243 NPTSMKRAREEVRSVAKG------KLNIDMKDIEKMDYLKCVSVRWRDYNILAKTRVIVN 296
+P + RE+ V L I E+ + V I +V+ +
Sbjct: 256 SPDQLALLREDPSLVGNAVEELLRYLTIGQFGGER---VATRDVELGGVRIAKGEQVVAH 312
Query: 297 AWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVI 356
A DP + PE F D + ++FG G +G A +E++ V
Sbjct: 313 VLAADFDPAFVEEPERF----------DITRRPAPHLAFGFGAHQCIGQQLARIELQIVF 362
Query: 357 ANLL 360
L
Sbjct: 363 ETLF 366
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 199 LRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVA 258
L D + E+ ++ L + + + +AG +TTA+ ++ L+ +P R + RS+
Sbjct: 219 LVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLV 277
Query: 259 KGKLNIDMKDIEKMDY----LKCVSVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFL 314
G + ++ + D + + I A VIV RD ++ P+
Sbjct: 278 PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD--- 334
Query: 315 SDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
+D ++FG G LG + A +E+E ++ L+
Sbjct: 335 -------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 199 LRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVA 258
L D + E+ ++ L + + + +AG +TTA+ ++ L+ +P R + RS+
Sbjct: 219 LVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLV 277
Query: 259 KGKLNIDMKDIEKMDY----LKCVSVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFL 314
G + ++ + D + + I A VIV RD ++ P+
Sbjct: 278 PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD--- 334
Query: 315 SDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
+D ++FG G LG + A +E+E ++ L+
Sbjct: 335 -------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 199 LRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVA 258
L D + E+ ++ L + + + +AG +TTA+ ++ L+ +P R + RS+
Sbjct: 219 LVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLV 277
Query: 259 KGKLNIDMKDIEKMDY----LKCVSVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFL 314
G + ++ + D + + I A VIV RD ++ P+
Sbjct: 278 PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD--- 334
Query: 315 SDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
+D ++FG G LG + A +E+E ++ L+
Sbjct: 335 -------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 199 LRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVA 258
L D + E+ ++ L + + + +AG +TTA+ ++ L+ +P R + RS+
Sbjct: 219 LVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLV 277
Query: 259 KGKLNIDMKDIEKMDY----LKCVSVRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFL 314
G + ++ + D + + I A VIV RD ++ P+
Sbjct: 278 PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD--- 334
Query: 315 SDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLL 360
+D ++FG G LG + A +E+E ++ L+
Sbjct: 335 -------ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 282 WRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAG 338
W + T V+++ + DP+ WD P++F ++F + + F+ I G G
Sbjct: 303 WNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF----AEREENLFDMIPQGGG 355
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTS---MKRA 250
DI+ QL + + G +LS D ++ + VAG +TT ++ M ++P K+
Sbjct: 228 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKV 287
Query: 251 REEV 254
R E
Sbjct: 288 RPET 291
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTS---MKRA 250
DI+ QL + + G +LS D ++ + VAG +TT ++ M ++P K+
Sbjct: 238 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKV 297
Query: 251 REEV 254
R E
Sbjct: 298 RPET 301
>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa
Length = 261
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 21 IVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLS 64
I+ S RP A + L E G ++Y EYW+ V+++ + LS
Sbjct: 54 ILTSERPGIFSAGLDLMEMYGRNPAHYAEYWKAVQELWLRLYLS 97
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTS---MKRA 250
DI+ QL + + G +LS D ++ + VAG +TT ++ M ++P K+
Sbjct: 229 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKV 288
Query: 251 REEV 254
R E
Sbjct: 289 RPET 292
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTS---MKRA 250
DI+ QL + + G +LS D ++ + VAG +TT ++ M ++P K+
Sbjct: 236 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKV 295
Query: 251 REEV 254
R E
Sbjct: 296 RPET 299
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTS---MKRA 250
DI+ QL + + G +LS D ++ + VAG +TT ++ M ++P K+
Sbjct: 245 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKV 304
Query: 251 REEV 254
R E
Sbjct: 305 RPET 308
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 194 DILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREE 253
DI+ +L + + G +LS D ++ + VAG +TT ++ M +NP + ++E
Sbjct: 221 DIVTKLIEADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQWELYKKE 280
Query: 254 VRSVAKGKL 262
A ++
Sbjct: 281 RPETAADEI 289
>pdb|1JEO|A Chain A, Crystal Structure Of The Hypothetical Protein Mj1247 From
Methanococcus Jannaschii At 2.0 A Resolution Infers A
Molecular Function Of 3-Hexulose-6-Phosphate Isomerase
Length = 180
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 319 LNSLVDCKSQDFEFISFGAGRRGYLGTSFAL 349
L+SL+D + + FG GR GY+G FA+
Sbjct: 30 LDSLIDRIIKAKKIFIFGVGRSGYIGRCFAM 60
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 218 ILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKC 277
+L + V G DTT ++ + L KNP + + V I ++ + +++
Sbjct: 259 VLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALVETMVPEI-IRWQTPLAHMRR 317
Query: 278 VSVRWRDYNILAKT-----RVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEF 332
++ D + KT +V++ ++ RD + DRPE+F+ D + + +
Sbjct: 318 TAI--ADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIID---------RPRPRQH 366
Query: 333 ISFGAGRRGYLGTSFALVEVEYVIANLLYWF 363
+SFG G +G A +++ + +L F
Sbjct: 367 LSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,427,340
Number of Sequences: 62578
Number of extensions: 450336
Number of successful extensions: 1122
Number of sequences better than 100.0: 123
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 917
Number of HSP's gapped (non-prelim): 133
length of query: 403
length of database: 14,973,337
effective HSP length: 101
effective length of query: 302
effective length of database: 8,652,959
effective search space: 2613193618
effective search space used: 2613193618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)