Query         048482
Match_columns 403
No_of_seqs    128 out of 2026
Neff          10.5
Searched_HMMs 29240
Date          Mon Mar 25 17:13:51 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048482hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3swz_A Steroid 17-alpha-hydrox 100.0   9E-61 3.1E-65  462.1  30.3  382    3-401    55-480 (494)
  2 3tbg_A Cytochrome P450 2D6; mo 100.0 6.3E-60 2.2E-64  454.6  32.2  383    4-401    57-477 (479)
  3 3pm0_A Cypib1, cytochrome P450 100.0 1.1E-60 3.7E-65  463.2  26.0  385    3-401    54-485 (507)
  4 3qz1_A Steroid 21-hydroxylase; 100.0 3.9E-60 1.3E-64  458.0  27.9  377    4-401    70-485 (496)
  5 3mdm_A Cholesterol 24-hydroxyl 100.0 7.6E-60 2.6E-64  451.2  26.9  371    4-401    37-443 (456)
  6 3czh_A Cytochrome P450 2R1; vi 100.0 4.4E-59 1.5E-63  448.5  31.9  377    4-400    61-476 (481)
  7 2fdv_A Cytochrome P450 2A6; CY 100.0   3E-59   1E-63  449.2  30.5  378    3-401    56-474 (476)
  8 3nxu_A Cytochrome P450 3A4; al 100.0 9.1E-60 3.1E-64  454.2  25.1  380    3-401    59-476 (485)
  9 3k9v_A 1,25-dihydroxyvitamin D 100.0 6.9E-59 2.4E-63  447.7  31.3  366    4-399    75-482 (482)
 10 1po5_A Cytochrome P450 2B4; ox 100.0 6.3E-59 2.2E-63  447.0  30.9  379    3-401    56-474 (476)
 11 1r9o_A Cytochrome P450 2C9; mo 100.0   1E-58 3.5E-63  445.8  30.8  379    3-401    57-475 (477)
 12 3n9y_A Cholesterol SIDE-chain  100.0 6.3E-59 2.2E-63  448.5  27.8  377    4-402    59-477 (487)
 13 3e6i_A CYPIIE1, P450-J, cytoch 100.0 3.4E-58 1.2E-62  442.1  32.3  378    3-402    56-474 (476)
 14 3ld6_A Lanosterol 14-alpha dem 100.0 6.1E-60 2.1E-64  452.3  19.1  366    4-400    58-454 (461)
 15 3s79_A Cytochrome P450 19A1; o 100.0 4.9E-58 1.7E-62  444.1  28.7  373    3-402    94-498 (503)
 16 2hi4_A Cytochrome P450 1A2; CY 100.0 5.3E-58 1.8E-62  442.7  28.5  380    4-401    62-489 (495)
 17 2ve3_A Putative cytochrome P45 100.0   4E-58 1.4E-62  437.4  26.3  360    3-400    56-444 (444)
 18 2cib_A Cytochrome P450 51; hem 100.0 1.4E-57 4.9E-62  434.9  21.7  368    4-401    51-450 (455)
 19 3dbg_A Putative cytochrome P45 100.0 3.2E-57 1.1E-61  434.1  21.1  364    4-400    68-462 (467)
 20 2ij2_A Cytochrome P450 BM3; mo 100.0 4.7E-56 1.6E-60  426.1  25.2  368    3-401    49-453 (470)
 21 3gw9_A Sterol 14alpha-demethyl 100.0 2.1E-56 7.3E-61  426.6  21.6  365    3-400    50-450 (450)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 9.3E-55 3.2E-59  416.5  19.2  365    3-398    57-453 (461)
 23 3nc3_A Cytochrome P450 CYPX; c 100.0 1.9E-52 6.4E-57  396.9  20.6  350    3-398    76-440 (441)
 24 3dax_A Cytochrome P450 7A1; ch 100.0 1.8E-52 6.2E-57  403.8  17.9  371    4-399    60-485 (491)
 25 3tkt_A Cytochrome P450; aromat 100.0 3.7E-51 1.2E-55  389.2  26.2  331    3-369    73-427 (450)
 26 4fb2_A P450CIN; heme, monooxyg 100.0 1.2E-51   4E-56  387.0  22.1  337    3-403    46-397 (398)
 27 2xkr_A CYP142, putative cytoch 100.0 3.6E-51 1.2E-55  383.8  24.9  341    3-401    40-396 (398)
 28 3v8d_A Cholesterol 7-alpha-mon 100.0 1.5E-52 5.2E-57  404.3  15.8  368    3-397    59-483 (491)
 29 3ejb_B Biotin biosynthesis cyt 100.0 5.1E-51 1.7E-55  383.7  25.5  345    3-401    38-398 (404)
 30 1cpt_A Cytochrome P450-TERP; o 100.0 5.5E-51 1.9E-55  386.0  25.5  352    3-399    51-428 (428)
 31 2cd8_A Cytochrome P450 monooxy 100.0 1.8E-50 6.1E-55  382.9  26.7  340    3-401    72-430 (436)
 32 1q5d_A P450 epoxidase; cytochr 100.0 2.5E-51 8.4E-56  387.2  20.2  345    3-402    49-419 (419)
 33 2jjn_A Cytochrome P450 113A1;  100.0 1.4E-50 4.9E-55  381.2  24.4  346    3-403    50-410 (411)
 34 3oft_A Cytochrome P450, CYP101 100.0 7.8E-51 2.7E-55  381.4  22.2  317    3-371    48-375 (396)
 35 3buj_A CALO2; heme, iron, meta 100.0 9.7E-51 3.3E-55  380.7  22.7  340    3-399    35-396 (397)
 36 3aba_A Cytochrome P450; oxidor 100.0 3.3E-50 1.1E-54  377.6  25.6  342    3-400    45-403 (403)
 37 3lxh_A Cytochrome P450; heme,  100.0   1E-50 3.5E-55  383.3  22.3  345    3-401    64-419 (421)
 38 2uuq_A CYP130, cytochrome P450 100.0 4.7E-51 1.6E-55  384.3  19.9  340    3-400    53-414 (414)
 39 1izo_A P450bsbeta, cytochrome  100.0 9.7E-50 3.3E-54  376.5  28.4  354    3-400    46-416 (417)
 40 3tyw_A Putative cytochrome P45 100.0 5.8E-50   2E-54  377.7  26.1  312    3-370    55-389 (417)
 41 3a4g_A Vitamin D hydroxylase;  100.0 4.3E-50 1.5E-54  377.4  24.1  338    3-401    45-403 (411)
 42 3mgx_A Putative P450 monooxyge 100.0 1.5E-50 5.1E-55  380.6  20.9  338    3-399    64-415 (415)
 43 2z3t_A Cytochrome P450; monoxy 100.0 5.2E-50 1.8E-54  378.5  24.7  341    3-399    47-416 (425)
 44 3ivy_A Cytochrome P450 CYP125; 100.0   3E-50   1E-54  381.3  22.6  342    4-401    71-430 (433)
 45 1ued_A P450 OXYC, P450 monooxy 100.0 1.5E-49 5.2E-54  373.4  27.0  336    3-396    55-406 (406)
 46 1jfb_A Nitric-oxide reductase  100.0 1.6E-49 5.3E-54  373.6  26.6  324    3-370    43-382 (404)
 47 1odo_A Putative cytochrome P45 100.0 1.9E-49 6.6E-54  373.1  25.4  344    3-398    40-407 (408)
 48 3r9b_A Cytochrome P450 164A2;  100.0 6.3E-50 2.2E-54  377.9  22.1  344    4-400    52-418 (418)
 49 2wm5_A CYP124, putative cytoch 100.0 5.5E-49 1.9E-53  372.4  28.3  323    3-369    76-414 (435)
 50 3b6h_A Prostacyclin synthase;  100.0   5E-50 1.7E-54  387.4  21.6  370    4-400    65-490 (498)
 51 1lfk_A OXYB, P450 monooxygenas 100.0 1.2E-49 4.2E-54  373.2  23.5  315    2-369    41-375 (398)
 52 3abb_A CYP105D6, cytochrome P4 100.0 8.3E-50 2.8E-54  375.6  22.4  336    3-399    50-407 (408)
 53 3rwl_A Cytochrome P450 alkane  100.0 2.6E-49 8.8E-54  373.7  25.6  343    3-398    64-426 (426)
 54 3b98_A Prostaglandin I2 syntha 100.0 3.3E-51 1.1E-55  393.4  12.8  366    4-401    65-472 (475)
 55 2zwu_A Camphor 5-monooxygenase 100.0 4.9E-50 1.7E-54  377.3  20.4  335    3-402    63-413 (415)
 56 2z36_A MOXA, cytochrome P450 t 100.0 4.5E-49 1.5E-53  370.7  26.3  340    3-397    48-408 (413)
 57 2dkk_A Cytochrome P450; CYP158 100.0 1.6E-49 5.4E-54  373.4  23.1  340    3-400    54-411 (411)
 58 1z8o_A 6-deoxyerythronolide B  100.0 2.3E-49   8E-54  372.0  23.7  334    3-396    39-402 (404)
 59 2zbx_A Cytochrome P450-SU1; be 100.0   7E-49 2.4E-53  369.6  27.0  334    3-397    51-407 (412)
 60 1s1f_A Putative cytochrome P45 100.0 4.1E-49 1.4E-53  370.5  25.2  333    3-397    51-405 (406)
 61 3awm_A Fatty acid alpha-hydrox 100.0   1E-48 3.5E-53  369.3  25.6  353    3-399    45-413 (415)
 62 1n97_A CYP175A1; electron tran 100.0 5.7E-50 1.9E-54  374.5  16.8  336    3-401    43-388 (389)
 63 2y5n_A MYCG, P-450-like protei 100.0 4.7E-49 1.6E-53  370.9  23.0  338    3-395    63-416 (417)
 64 1gwi_A CYP154C1, cytochrome P4 100.0 4.3E-49 1.5E-53  370.8  19.9  339    3-400    43-410 (411)
 65 2wiy_A XPLA-heme, cytochrome P 100.0 2.5E-48 8.6E-53  363.5  24.3  321    3-370    42-374 (394)
 66 3oo3_A OXY protein; cytochrome 100.0   9E-48 3.1E-52  359.2  26.8  326    3-395    41-383 (384)
 67 2xbk_A PIMD protein; epoxidati 100.0 6.7E-48 2.3E-52  361.3  24.5  327    3-395    52-403 (404)
 68 3p3o_A Cytochrome P450; monoox 100.0 4.7E-48 1.6E-52  364.3  18.0  341    4-398    57-415 (416)
 69 4dnj_A Putative cytochrome P45 100.0 3.3E-47 1.1E-51  357.7  21.9  340    3-398    57-411 (412)
 70 1n40_A P450 MT2, cytochrome P4 100.0 2.3E-47   8E-52  357.4  18.7  330    3-395    42-395 (396)
 71 4dxy_A Cytochrome P450, CYP101 100.0 4.5E-46 1.5E-50  349.5  26.5  324    3-371    63-394 (417)
 72 2rfb_A Cytochrome P450; heme,  100.0 1.7E-46 5.8E-51  344.9  22.1  299    3-369    12-323 (343)
 73 1io7_A Cytochrome P450 CYP119; 100.0 4.3E-47 1.5E-51  352.2  18.3  329    3-400    20-368 (368)
 74 3b4x_A 367AA long hypothetical 100.0   4E-46 1.4E-50  345.3  24.1  323    3-397    20-365 (367)
 75 3dan_A Cytochrome P450 74A2; A 100.0 1.1E-43 3.8E-48  340.8  16.4  299   41-369   109-453 (473)
 76 3dsk_A Cytochrome P450 74A, ch 100.0 1.6E-44 5.6E-49  348.5   8.7  298   41-369   127-471 (495)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 5.4E-32 1.8E-36  248.8   6.1  141  216-370   214-361 (381)
 78 2yjn_B Erycii, DTDP-4-keto-6-d  46.2    0.78 2.7E-05   41.6  -4.9   84    3-110    80-170 (381)
 79 2gvi_A Conserved hypothetical   27.6      28 0.00097   28.1   2.1   20  340-359    19-38  (204)
 80 1nrj_A Signal recognition part  25.6      21 0.00073   26.6   0.9   22  340-361    18-39  (158)
 81 3bej_E Nuclear receptor coacti  24.8      71  0.0024   15.6   2.7   21  342-362     1-21  (26)
 82 2e2s_A Agelenin; cystine knot,  24.1      44  0.0015   17.8   1.6   15  331-345     8-22  (36)
 83 3ijw_A Aminoglycoside N3-acety  21.0      39  0.0013   28.6   1.7   23  288-310    64-86  (268)

No 1  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=9e-61  Score=462.13  Aligned_cols=382  Identities=20%  Similarity=0.341  Sum_probs=306.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchH--HHhhhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSV--RRVQSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~--~~l~~~~~~i~~~~~   80 (403)
                      .+|++||+++++||.+++..|++|+.......+...+.+++++.+|+.|+.+||++ .+.|+.  ..+..+.+.+.+++.
T Consensus        55 ~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~  133 (494)
T 3swz_A           55 TVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEIS  133 (494)
T ss_dssp             EEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHH
Confidence            36899999999999999899999987655555544456777887899999999998 788874  457789999999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhhc--------cCCchhhHHHHHH----HHHHHhcccccchhhhhhhhhhhhh
Q 048482           81 SLITKIRLSCFNKGSPLNLLEMLLIASKEE--------NTGQSNKFGELLR----RLEEQFAAFCVGDTFLFLGCLDVLS  148 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~~~~~~~v--------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~  148 (403)
                      .+++.|...   .++.+|+...+..+++++        .++..++....+.    .+...+....+..++|++.+++  .
T Consensus       134 ~l~~~l~~~---~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p--~  208 (494)
T 3swz_A          134 TLCDMLATH---NGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP--N  208 (494)
T ss_dssp             HHHHHHHHT---TTEEECCHHHHHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC--C
T ss_pred             HHHHHHHHc---CCCcccHHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC--c
Confidence            999999864   577899999999999998        2222222222222    2233334445566677776653  2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCC--------CCCCCCHHHHHHHHHH
Q 048482          149 GLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGM--------LGAELSQDNLKAVILD  220 (403)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--------~~~~~s~~~i~~~~~~  220 (403)
                      ...++..+..+.+.+++..+++++++....   ..     ..|+++.|++...+..        .+..+++++|++++..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-----~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~  280 (494)
T 3swz_A          209 KTLEKLKSHVKIRNDLLNKILENYKEKFRS---DS-----ITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGD  280 (494)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTTTCCT---TC-----CCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cc-----hhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHH
Confidence            345667777788888888888888765422   22     5799999998764321        1235899999999999


Q ss_pred             HHhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------
Q 048482          221 MFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------  279 (403)
Q Consensus       221 ~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------  279 (403)
                      +++||+|||+++++|++++|++||++|+||++||+++++.+..++++++.+||||+|||                     
T Consensus       281 ~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d  360 (494)
T 3swz_A          281 IFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVD  360 (494)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSS
T ss_pred             HhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCC
Confidence            99999999999999999999999999999999999999988889999999999999999                     


Q ss_pred             EeecccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCC-CCCCccccccCCCCCCCCChHHHHHHHHHHHHH
Q 048482          280 VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDC-KSQDFEFISFGAGRRGYLGTSFALVEVEYVIAN  358 (403)
Q Consensus       280 ~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~-~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~  358 (403)
                      ++++||.|||||.|+++.+++||||++|+||++|+||||++++... ......|+|||+|+|.|+|++||++|++++|+.
T Consensus       361 ~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~  440 (494)
T 3swz_A          361 SSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAW  440 (494)
T ss_dssp             EEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHH
T ss_pred             ceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence            7789999999999999999999999999999999999999865332 224568999999999999999999999999999


Q ss_pred             HHhcceeecCCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          359 LLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       359 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      |+++|+|+++++...  .......+++..|+ +++|++++|++
T Consensus       441 ll~~f~~~~~~~~~~--~~~~~~~~~~~~p~-~~~v~~~~R~~  480 (494)
T 3swz_A          441 LLQRFDLEVPDDGQL--PSLEGIPKVVFLID-SFKVKIKVRQA  480 (494)
T ss_dssp             HHHHEEEECCSSCCC--CCCSCEESSSEECC-CCCEEEEECHH
T ss_pred             HHHhcEEeeCCCCCC--CCCCCccceeecCC-CcEEEEEEcCc
Confidence            999999998765432  22333446666664 89999999864


No 2  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=6.3e-60  Score=454.56  Aligned_cols=383  Identities=22%  Similarity=0.339  Sum_probs=292.8

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccceeecc--ccceecCCCchhhHHHHhHHHHhhchHHHhhh--hhhhHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYE--CQGIGFSNYGEYWRQVRKICVLQLLSVRRVQS--FQHVRDGEV   79 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~--~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~--~~~~i~~~~   79 (403)
                      +|++||+++++||.+++..|++|+.......+..+  +.+++++.+|+.|+.+|+.+ .+.|+...+..  +...+....
T Consensus        57 vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~  135 (479)
T 3tbg_A           57 VVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEA  135 (479)
T ss_dssp             EEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHhCChhhcCCCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHH
Confidence            67899999999999999999999877666655432  45667788899999999998 78887776643  456666666


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHHHHHHhhc--------cCC-chhhHHHHHHHHHHHhccccc--chhhhhhhhhhhhh
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEMLLIASKEE--------NTG-QSNKFGELLRRLEEQFAAFCV--GDTFLFLGCLDVLS  148 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v--------~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~  148 (403)
                      ..+...+...   .+..+|+.+++..+++++        .++ .+.+.................  ...+....+...+.
T Consensus       136 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (479)
T 3tbg_A          136 ACLCAAFANH---SGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP  212 (479)
T ss_dssp             HHHHHHHHTT---TTCCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSH
T ss_pred             HHHHHHHHhc---cCCcccHHHHHHHHHHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccch
Confidence            6666666543   677899999999999988        222 223333333333332222111  11111111111223


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhc--CCCCCCCCHHHHHHHHHHHHhcCc
Q 048482          149 GLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKD--GMLGAELSQDNLKAVILDMFVAGT  226 (403)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~~s~~~i~~~~~~~~~ag~  226 (403)
                      ....+.....+...+.+.+.++++.+....  ...     ..|+++.++.....  ......++++++++++..+++||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  285 (479)
T 3tbg_A          213 ALAGKVLRFQKAFLTQLDELLTEHRMTWDP--AQP-----PRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGM  285 (479)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHHHCCT--TSC-----CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccc-----cchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhh
Confidence            344555666677777788888777766433  222     56777766654322  222457999999999999999999


Q ss_pred             cchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------Eeeccc
Q 048482          227 DTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------VRWRDY  285 (403)
Q Consensus       227 ~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------~~~~g~  285 (403)
                      |||+++++|++++|++||++|+||++||+.+.+.+..++++++.+||||+|||                     ++++||
T Consensus       286 dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~  365 (479)
T 3tbg_A          286 VTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGF  365 (479)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTE
T ss_pred             hhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCE
Confidence            99999999999999999999999999999999988889999999999999999                     789999


Q ss_pred             ccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhccee
Q 048482          286 NILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDW  365 (403)
Q Consensus       286 ~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~  365 (403)
                      .|||||.|+++.+++||||++|+||++|+||||++++.+ ...+..|+|||+|+|.|+|++||++|++++||.||++|+|
T Consensus       366 ~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~  444 (479)
T 3tbg_A          366 RIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGH-FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF  444 (479)
T ss_dssp             EECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTTCC-BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred             EecCCCeeeechhhhcCChhhCCCccccCccccCCCCcc-cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEE
Confidence            999999999999999999999999999999999987633 4467789999999999999999999999999999999999


Q ss_pred             ecCCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          366 NLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      +++++..  ........++++.|+ +++|+++||+.
T Consensus       445 ~~~~~~~--~~~~~~~~~~~~~P~-~~~v~~~pRs~  477 (479)
T 3tbg_A          445 SVPTGQP--RPSHHGVFAFLVSPS-PYELCAVPRHH  477 (479)
T ss_dssp             ECCTTSC--CCCSCEEESSSEEEC-CCCBEEEEC--
T ss_pred             EeCCCCC--CccccccceeeecCC-CeEEEEEECCC
Confidence            9877642  222344567777775 89999999985


No 3  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-60  Score=463.17  Aligned_cols=385  Identities=19%  Similarity=0.283  Sum_probs=304.3

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhh------hhhhhHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQ------SFQHVRD   76 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~------~~~~~i~   76 (403)
                      -+|++||+++++||.+++..|++++......... .+.+++++.+|+.|+.+||++ .+.|+.....      .+.+.+.
T Consensus        54 ~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~  131 (507)
T 3pm0_A           54 IVVLNGERAIHQALVQQGSAFADRPSFASFRVVS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVL  131 (507)
T ss_dssp             EEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHGG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHhCcHhhCCCCcchHHHhhc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHH
Confidence            3678999999999998888999888765444333 356777777899999999998 7776644433      3899999


Q ss_pred             HHHHHHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-----chhhHHHH---HHHHHHHhcccccchhhhhhhhh
Q 048482           77 GEVSSLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-----QSNKFGEL---LRRLEEQFAAFCVGDTFLFLGCL  144 (403)
Q Consensus        77 ~~~~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~  144 (403)
                      ++++.+++.|.+.. .++..+|+.+++..+++++    .|+     .++++...   ...+...+........+|++.++
T Consensus       132 ~~~~~l~~~l~~~~-~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l  210 (507)
T 3pm0_A          132 SEARELVALLVRGS-ADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYF  210 (507)
T ss_dssp             HHHHHHHHHHHHTT-GGGCCBCCHHHHHHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGS
T ss_pred             HHHHHHHHHHHhhc-ccCCCcChHHHHHHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHc
Confidence            99999999998753 2467899999999999999    222     22333332   23333333333455566766655


Q ss_pred             hh-hhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCC------CCCCCHHHHHHH
Q 048482          145 DV-LSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGML------GAELSQDNLKAV  217 (403)
Q Consensus       145 ~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~~s~~~i~~~  217 (403)
                      +. +....++..+..+.+.+++.+.|+++++....  ...     ..|+++.|++.......      +..+++++++++
T Consensus       211 p~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~-----~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~  283 (507)
T 3pm0_A          211 PNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRP--GAA-----PRDMMDAFILSAEKKAAGDSHGGGARLDLENVPAT  283 (507)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCC-----CCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccC-----CccHHHHHHHHhhhhccccccCCCCCCCHHHHHHH
Confidence            21 11245677788889999999999998876532  123     67999999965442211      125899999999


Q ss_pred             HHHHHhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE------------------
Q 048482          218 ILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS------------------  279 (403)
Q Consensus       218 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i------------------  279 (403)
                      +..+++||+|||+.+++|++++|++||++|+||++||+++.+.+..++++++.+||||+|||                  
T Consensus       284 ~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~  363 (507)
T 3pm0_A          284 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHAT  363 (507)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEEC
T ss_pred             HHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccc
Confidence            99999999999999999999999999999999999999999887788999999999999999                  


Q ss_pred             ---EeecccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCC-CCccccccCCCCCCCCChHHHHHHHHHH
Q 048482          280 ---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKS-QDFEFISFGAGRRGYLGTSFALVEVEYV  355 (403)
Q Consensus       280 ---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~-~~~~~~~FG~G~r~C~G~~~A~~~~~~~  355 (403)
                         ++++||.|||||.|+++.+++||||++|+||++|+||||++.+..... .+..|+|||+|+|.|+|++||.+|++++
T Consensus       364 ~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~  443 (507)
T 3pm0_A          364 TANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLF  443 (507)
T ss_dssp             SSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHH
T ss_pred             cCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHH
Confidence               788999999999999999999999999999999999999976533211 2358999999999999999999999999


Q ss_pred             HHHHHhcceeecCCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          356 IANLLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       356 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      |+.|+++|+|++.++.   +.+.....++++.|+ +++|++++|+.
T Consensus       444 la~ll~~f~~~~~~~~---~~~~~~~~~~~~~p~-~~~v~~~~R~~  485 (507)
T 3pm0_A          444 ISILAHQCDFRANPNE---PAKMNFSYGLTIKPK-SFKVNVTLRES  485 (507)
T ss_dssp             HHHHHHHEEEEECTTC---CSCCCEEESSSEEEC-SCCEEEEESSC
T ss_pred             HHHHHHHeEEecCCCC---CCCCCCCCCccccCC-CcEEEEEEccc
Confidence            9999999999987653   233444456677666 67999999975


No 4  
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=3.9e-60  Score=458.02  Aligned_cols=377  Identities=21%  Similarity=0.302  Sum_probs=296.2

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSLI   83 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~li   83 (403)
                      .+++||+++++||.+++..|++|+..........+..+++++++|+.|+.+||++ .+.|+.+.++.+.+.++++++.++
T Consensus        70 vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~  148 (496)
T 3qz1_A           70 VVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFC  148 (496)
T ss_dssp             EEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHH
Confidence            6789999999999988888998887655444433223666665699999999998 899997778889999999999999


Q ss_pred             HHHHHhccCCCCceeHHHHHHHHHhhc----cCCc--hhhHHHHHHHHHHHhccc-----ccchhhhhhhhhhhhhchHH
Q 048482           84 TKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ--SNKFGELLRRLEEQFAAF-----CVGDTFLFLGCLDVLSGLIG  152 (403)
Q Consensus        84 ~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~  152 (403)
                      +.|...   .++++|+.+++..+++++    .|+.  +..+......+...+...     .....+|++.+++  ....+
T Consensus       149 ~~l~~~---~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp--~~~~~  223 (496)
T 3qz1_A          149 ERMRVQ---AGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFP--NPGLW  223 (496)
T ss_dssp             HHHHTT---CSCCCHHHHHHTHHHHHHTTTTSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCC--CHHHH
T ss_pred             HHHHhc---CCCccCHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCC--hHHHH
Confidence            999863   577899999999999999    3443  233333333333333221     1233455554442  13456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCC---CCCCCCHHHHHHHHHHHHhcCccch
Q 048482          153 RLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGM---LGAELSQDNLKAVILDMFVAGTDTT  229 (403)
Q Consensus       153 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---~~~~~s~~~i~~~~~~~~~ag~~tt  229 (403)
                      +..++.+.+.+++.+.|+++++....   ..     ..|+++.|++...+..   +...++++++++++..+++||+|||
T Consensus       224 ~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-----~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTt  295 (496)
T 3qz1_A          224 RLKQAIENRDHMVEKQLRRHKESMVA---GQ-----WRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETT  295 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCCS---SC-----CSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccC---CC-----ccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHH
Confidence            77888899999999999999876522   23     6789999998765431   1126899999999999999999999


Q ss_pred             HHHHHHHHHHHhhChhhHHHHHHHHHHHhcC----CCcCChhhccCCCcceEEE---------------------Eeecc
Q 048482          230 ATTLEWAMAELVKNPTSMKRAREEVRSVAKG----KLNIDMKDIEKMDYLKCVS---------------------VRWRD  284 (403)
Q Consensus       230 ~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~----~~~~~~~~~~~lp~l~a~i---------------------~~~~g  284 (403)
                      +++++|++++|++||++|+||++||+++++.    +..+ ++++.+||||+|||                     ++++|
T Consensus       296 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g  374 (496)
T 3qz1_A          296 ASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFG  374 (496)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSS
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECC
Confidence            9999999999999999999999999999986    4556 99999999999999                     77899


Q ss_pred             cccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce
Q 048482          285 YNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD  364 (403)
Q Consensus       285 ~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~  364 (403)
                      +.|||||.|.++.+++||||++|+||++|+||||++.+     ....++|||+|+|.|+|++||++|++++++.|+++|+
T Consensus       375 ~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~  449 (496)
T 3qz1_A          375 YDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPG-----ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFT  449 (496)
T ss_dssp             SEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC--------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEeCCCCEEEechHHhhCChhhcCCcccCCcccccCCC-----CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcE
Confidence            99999999999999999999999999999999999764     1237999999999999999999999999999999999


Q ss_pred             eecCCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          365 WNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      |++.++..+.+++.....+++..|+ +++|++++|+.
T Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R~~  485 (496)
T 3qz1_A          450 LLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPRGV  485 (496)
T ss_dssp             CCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCCCCC--
T ss_pred             EeCCCCCCCCCCCcccCcceEecCC-ceEEEEEEecc
Confidence            9987543222222222256677776 89999999974


No 5  
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=7.6e-60  Score=451.18  Aligned_cols=371  Identities=17%  Similarity=0.252  Sum_probs=292.6

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCc-c-cee--eccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTP-A-NIL--LYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~-~-~~~--~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~   79 (403)
                      .+++||+++++||.+  ..|.+++.... . ..+  ...|.+++++.+|+.|+++||++ ++.|+.+.++.+.+.+.+++
T Consensus        37 vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~  113 (456)
T 3mdm_A           37 VIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVI-DLAFSRSSLVSLMETFNEKA  113 (456)
T ss_dssp             EEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHHHHHH-GGGGSHHHHHTTHHHHHHHH
T ss_pred             EEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHHHHHHhhc-ccccCHHHHHHHHHHHHHHH
Confidence            689999999999963  34554432111 0 011  11245666666799999999998 89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC--------chhhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG--------QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +.+++.|.... +++.++|+.+++..+++++    .|+        ....+...+..+...+..    ...++..+++..
T Consensus       114 ~~l~~~l~~~~-~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~  188 (456)
T 3mdm_A          114 EQLVEILEAKA-DGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITA----SRNTLAKFLPGK  188 (456)
T ss_dssp             HHHHHHHHHTC-SSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHHHHHHHHHHH----HHHSCGGGCGGG
T ss_pred             HHHHHHHHHhc-CCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHHHHHHHHHHH----HHHHHHHhCchh
Confidence            99999998753 3457899999999999999    221        223444444444433221    112333333211


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ....+...+..+.+.+++.++|+++++.... +...     ..|+++.|++...     ..++++++++++..+++||+|
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~-----~~d~l~~ll~~~~-----~~~~~~~l~~~~~~l~~AG~d  257 (456)
T 3mdm_A          189 RKQLREVRESIRFLRQVGRDWVQRRREALKR-GEEV-----PADILTQILKAEE-----GAQDDEGLLDNFVTFFIAGHE  257 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC-----CCCHHHHHHHHTS-----SCSSSHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccc-----hhhHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHH
Confidence            1223455667778888888999888876533 1222     5699999998742     267899999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------Eeeccccc
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRDYNI  287 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g~~i  287 (403)
                      ||+.+++|++++|++||++|+||++|++++.+....++++++.+||||+|||                    ++++||.|
T Consensus       258 TTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~I  337 (456)
T 3mdm_A          258 TSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRV  337 (456)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCSSCCEEEEECSCEEETTEEE
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCCccccccccCCceeECCEEE
Confidence            9999999999999999999999999999999988889999999999999999                    78999999


Q ss_pred             CCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeec
Q 048482          288 LAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNL  367 (403)
Q Consensus       288 p~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~  367 (403)
                      ||||.|+++.+++||||++|+||++|+||||++..   ......|+|||+|+|.|+|++||++|++++|+.|+++|+|++
T Consensus       338 p~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  414 (456)
T 3mdm_A          338 PGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA---PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRL  414 (456)
T ss_dssp             CSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTS---CCCSSSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred             CCCCEEEeehHHhcCCchhcCCccccCccccCCCC---CCCCCcccCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEe
Confidence            99999999999999999999999999999999763   234567999999999999999999999999999999999998


Q ss_pred             CCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          368 PLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      .++..   .  ......++.|+.+++|++++|+.
T Consensus       415 ~~~~~---~--~~~~~~~~~p~~~~~~~~~~r~~  443 (456)
T 3mdm_A          415 VPGQR---F--GLQEQATLKPLDPVLCTLRPRGW  443 (456)
T ss_dssp             CTTCC---C--CEEESSSEEESSCCEEEEEECCC
T ss_pred             CCCCc---c--eeecceEEecCCCeEEEEEEcCC
Confidence            76532   2  22335677888899999999864


No 6  
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=4.4e-59  Score=448.50  Aligned_cols=377  Identities=22%  Similarity=0.308  Sum_probs=295.4

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHh--hhhhhhHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRV--QSFQHVRDGEVSS   81 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l--~~~~~~i~~~~~~   81 (403)
                      ++++||+++++||.+++..|++++.......+. .+.+++++.+|+.|+++||++ .+.|+...+  ..+.+.+.++++.
T Consensus        61 v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~  138 (481)
T 3czh_A           61 VVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKF  138 (481)
T ss_dssp             EEEESHHHHHHHHTTTTTTTCBCCCCHHHHHHH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHhhchHhhCCCCCcHHHHhhc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHH
Confidence            578999999999988777898877543222222 123556667799999999998 899987654  6789999999999


Q ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-----chhhHHHHHHHHHHHhccc---c--cchhhhhhhhhhhh
Q 048482           82 LITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-----QSNKFGELLRRLEEQFAAF---C--VGDTFLFLGCLDVL  147 (403)
Q Consensus        82 li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-----~~~~~~~~~~~~~~~~~~~---~--~~~~~p~~~~~~~~  147 (403)
                      +++.|...   .++.+|+.+.+..+++++    .|+     .+.++......+...+...   .  ....+|++.+++  
T Consensus       139 l~~~l~~~---~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp--  213 (481)
T 3czh_A          139 FNDAIETY---KGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILP--  213 (481)
T ss_dssp             HHHHHHTT---TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCS--
T ss_pred             HHHHHHHc---CCCCcCHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCC--
Confidence            99999763   456799999999999998    222     2233433333333322211   1  334456554332  


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCC--CCCCCCHHHHHHHHHHHHhcC
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGM--LGAELSQDNLKAVILDMFVAG  225 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~s~~~i~~~~~~~~~ag  225 (403)
                      ....++..++.+.+.+++.++|+++++....   ..     ..|+++.|++...+..  ++..++++++++++..+++||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG  285 (481)
T 3czh_A          214 FGKHQQLFRNAAVVYDFLSRLIEKASVNRKP---QL-----PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAG  285 (481)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT---TC-----CSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---Cc-----hHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhc
Confidence            1345667788888999999999998875321   22     5799999998754321  123699999999999999999


Q ss_pred             ccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------Eeecc
Q 048482          226 TDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------VRWRD  284 (403)
Q Consensus       226 ~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------~~~~g  284 (403)
                      +|||+++++|++++|++||++|+||++|++++++.+..++++++.+||||+|||                     ++++|
T Consensus       286 ~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G  365 (481)
T 3czh_A          286 TETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRG  365 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETT
T ss_pred             cchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeC
Confidence            999999999999999999999999999999999877778999999999999999                     78899


Q ss_pred             cccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce
Q 048482          285 YNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD  364 (403)
Q Consensus       285 ~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~  364 (403)
                      +.|||||.|+++.+++||||++|+||++|+||||++++.. ...+..|+|||+|+|.|+|++||++|++++|+.|+++|+
T Consensus       366 ~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~-~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~  444 (481)
T 3czh_A          366 YSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGY-FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH  444 (481)
T ss_dssp             EEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSC-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred             EEcCCCCEEEechHHHhCCcccCCCccccCCCceeCCCCC-CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheE
Confidence            9999999999999999999999999999999999975422 245678999999999999999999999999999999999


Q ss_pred             eecCCCCccCCccccccCCcccccCCCceeeeccCC
Q 048482          365 WNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  400 (403)
                      +++.++..   .+.....+++..|. ++.++++||-
T Consensus       445 ~~~~~~~~---~~~~~~~~~~~~p~-~~~~~~~~~~  476 (481)
T 3czh_A          445 LHFPHELV---PDLKPRLGMTLQPQ-PYLICAERRH  476 (481)
T ss_dssp             EECGGGCC---CCCCCCSSSSCCCC-CCCBEEEECC
T ss_pred             EeCCCCCC---CCcccCCCceecCC-ceEEEEEecc
Confidence            99865431   22223346666655 6788888874


No 7  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=3e-59  Score=449.24  Aligned_cols=378  Identities=20%  Similarity=0.273  Sum_probs=295.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHh--hhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRV--QSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l--~~~~~~i~~~~~   80 (403)
                      .++++||+++++||.++...|++++......... .+.+++++ +|+.|+++||++ .+.|+...+  +.+.+.+.++++
T Consensus        56 ~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~-~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~  132 (476)
T 2fdv_A           56 VVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF-KGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAG  132 (476)
T ss_dssp             EEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHH-TTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhc-CCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHH
Confidence            3678999999999987777888776543222222 24555555 699999999998 899988776  789999999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-----chhhHHHHHHHHHHHhccc-----ccchhhhh-hhhhh
Q 048482           81 SLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-----QSNKFGELLRRLEEQFAAF-----CVGDTFLF-LGCLD  145 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~p~-~~~~~  145 (403)
                      .+++.|...   .++.+|+.+++..+++++    .|+     .+.++.+....+...+...     .+...+|+ +.+  
T Consensus       133 ~l~~~l~~~---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~--  207 (476)
T 2fdv_A          133 FLIDALRGT---GGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKH--  207 (476)
T ss_dssp             HHHHHHHHT---TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHhc---CCCccChHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHh--
Confidence            999999764   457899999999999998    222     2223434333333322211     12234554 222  


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcC--CCCCCCCHHHHHHHHHHHHh
Q 048482          146 VLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDG--MLGAELSQDNLKAVILDMFV  223 (403)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~~s~~~i~~~~~~~~~  223 (403)
                       ++...++..++.+.+.+++.+.|+++++...   ...     ..|+++.|++...+.  .++..++++++++++..+++
T Consensus       208 -l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~-----~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~  278 (476)
T 2fdv_A          208 -LPGPQQQAFQLLQGLEDFIAKKVEHNQRTLD---PNS-----PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFI  278 (476)
T ss_dssp             -SCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC---TTS-----CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHH
T ss_pred             -cCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCC-----CccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHH
Confidence             2344566778888999999999999886531   122     579999999875431  11346999999999999999


Q ss_pred             cCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------Eee
Q 048482          224 AGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------VRW  282 (403)
Q Consensus       224 ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------~~~  282 (403)
                      ||+|||+.+++|++++|++||++|+||++||+++++.+..++++++.+||||+|||                     +++
T Consensus       279 AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~  358 (476)
T 2fdv_A          279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF  358 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE
T ss_pred             hccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeE
Confidence            99999999999999999999999999999999999876778999999999999999                     788


Q ss_pred             cccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhc
Q 048482          283 RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYW  362 (403)
Q Consensus       283 ~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~  362 (403)
                      +|+.|||||.|.++.+++||||++|+||++|+||||++.+.. ...+..|+|||+|+|.|+|++||++|++++|+.|+++
T Consensus       359 ~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~~-~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~  437 (476)
T 2fdv_A          359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ-FKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQN  437 (476)
T ss_dssp             TTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSC-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCCC-CCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999975432 2245689999999999999999999999999999999


Q ss_pred             ceeecCCCCccCCccccc-cCCcccccCCCceeeeccCCC
Q 048482          363 FDWNLPLGKVEENLNMFE-VNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       363 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      |++++.++..  ..+... ..+++..| .+++|++++|+.
T Consensus       438 f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 2fdv_A          438 FRLKSSQSPK--DIDVSPKHVGFATIP-RNYTMSFLPRHH  474 (476)
T ss_dssp             EEEEESSCGG--GCCCSCSEESSSEEC-CCCCEEEEEC--
T ss_pred             cEEEcCCCCC--CCCccccccceeecC-CceEEEEEeccc
Confidence            9999876532  112223 45667777 589999999964


No 8  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=9.1e-60  Score=454.17  Aligned_cols=380  Identities=19%  Similarity=0.265  Sum_probs=284.8

Q ss_pred             ccccCCHHHHHHHHHhc-cccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTH-DIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS   81 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~-~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~   81 (403)
                      ..+++||+++++||.++ ...|.+++.......   .+.+ ++..+|+.|+++||++ ++.|+.++++.+.+.++++++.
T Consensus        59 ~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~---~~~~-l~~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~  133 (485)
T 3nxu_A           59 VLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF---MKSA-ISIAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDV  133 (485)
T ss_dssp             EEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG---GGGS-TTTCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhccchhhccCCcccccccc---cccC-ccccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHH
Confidence            36899999999999877 567887765443332   2344 4445699999999998 8999999999999999999999


Q ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC--------chhhHHHHHHHHHHHhcc---cccchhhhhhhhhhh
Q 048482           82 LITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG--------QSNKFGELLRRLEEQFAA---FCVGDTFLFLGCLDV  146 (403)
Q Consensus        82 li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~  146 (403)
                      +++.|.+.. .+++++|+.+++..+++++    .|+        ..+.+.+...........   ......+|++.++..
T Consensus       134 l~~~l~~~~-~~g~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~  212 (485)
T 3nxu_A          134 LVRNLRREA-ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILE  212 (485)
T ss_dssp             HHHHHHHHH-HHTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHH
T ss_pred             HHHHHHHHh-ccCCcCcHHHHHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHH
Confidence            999997643 2467899999999999999    222        122333222221110000   001122333322210


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCC--CCCCCCHHHHHHHHHHHHhc
Q 048482          147 LSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGM--LGAELSQDNLKAVILDMFVA  224 (403)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~s~~~i~~~~~~~~~a  224 (403)
                      ..............+.+.+...++++.+..    ...     ..|+++.|++......  .+..++++++++++..+++|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~A  283 (485)
T 3nxu_A          213 VLNICVFPREVTNFLRKSVKRMKESRLEDT----QKH-----RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA  283 (485)
T ss_dssp             HTTCCSSCHHHHHHHHHHHHHHHHHHHHCC------------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHH
T ss_pred             HhhhhhchHHHHHHHHHHHHHHHHHHHhcc----CCC-----cccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHH
Confidence            001011112334445555666665554321    222     6799999998764321  13469999999999999999


Q ss_pred             CccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------Eeecc
Q 048482          225 GTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRD  284 (403)
Q Consensus       225 g~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g  284 (403)
                      |+|||+++++|++++|++||++|+||++||+++.+....++++++.+||||+|||                    ++++|
T Consensus       284 G~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g  363 (485)
T 3nxu_A          284 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING  363 (485)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETT
T ss_pred             hhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECC
Confidence            9999999999999999999999999999999999887789999999999999999                    78999


Q ss_pred             cccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce
Q 048482          285 YNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD  364 (403)
Q Consensus       285 ~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~  364 (403)
                      +.|||||.|+++.+++||||++|+||++|+||||++.+.. ...+..|+|||+|+|.|+|++||++|++++|+.|+++|+
T Consensus       364 ~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~  442 (485)
T 3nxu_A          364 MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFS  442 (485)
T ss_dssp             EEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHHT-TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEE
T ss_pred             EEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCccc-cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcE
Confidence            9999999999999999999999999999999999976432 335678999999999999999999999999999999999


Q ss_pred             eecCCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          365 WNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      |++.++..   .+.....+.++.|+.+++|++++|+.
T Consensus       443 ~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~r~~  476 (485)
T 3nxu_A          443 FKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESRDG  476 (485)
T ss_dssp             EECCTTCC---SSCCBCSSSSCCBSSCCEEEEEEC--
T ss_pred             EEeCCCCC---CCcccCCCeeccCCCCeEEEEEEccC
Confidence            99876532   12333456677888899999999975


No 9  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=6.9e-59  Score=447.66  Aligned_cols=366  Identities=18%  Similarity=0.229  Sum_probs=289.3

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccc---eeeccccceecCCCchhhHHHHhHHHHhh-chHHHhhhhhhhHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPAN---ILLYECQGIGFSNYGEYWRQVRKICVLQL-LSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~---~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~-f~~~~l~~~~~~i~~~~   79 (403)
                      .+++||+++++||.+ ...|.+++......   .....+.++++ .+|+.|+++||++ .+. ++.+.++.+.+.+++++
T Consensus        75 vvv~dp~~~~~il~~-~~~~~~r~~~~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~i~~~~  151 (482)
T 3k9v_A           75 VHLGSPSLLEALYRT-ESAHPQRLEIKPWKAYRDHRNEAYGLMI-LEGQEWQRVRSAF-QKKLMKPVEIMKLDKKINEVL  151 (482)
T ss_dssp             EEECSHHHHHHHHHT-CCSSCCCCCCHHHHHHHHHHTCCCCTTT-CCHHHHHHHHHHH-HHHHTCHHHHGGGHHHHHHHH
T ss_pred             EEEcCHHHHHHHHHh-cCCCCCCCCchHHHHHHHhcCCCCCcee-CCCchHHHHHHHh-hHHhcChHHHHHHHHHHHHHH
Confidence            578999999999986 45788776543221   11112345444 4699999999998 666 47888999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHHHHHHhhc--------cCC--c------hhhHHHHHHHHHHHhcccccchhhh--hh
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEMLLIASKEE--------NTG--Q------SNKFGELLRRLEEQFAAFCVGDTFL--FL  141 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v--------~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~p--~~  141 (403)
                      +.+++.|.+.....++++|+.+++..+++++        .++  .      ...+.+.+..+...+.   ....+|  +.
T Consensus       152 ~~l~~~l~~~~~~~g~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~  228 (482)
T 3k9v_A          152 ADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFG---KMMVTPVELH  228 (482)
T ss_dssp             HHHHHHHHHHCCTTSCCTTHHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGG---GGSSSCHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHH---HHHhhhHHHH
Confidence            9999999886533567899999999999999        221  1      1234444443333222   222223  12


Q ss_pred             hhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHH
Q 048482          142 GCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDM  221 (403)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~  221 (403)
                      .++.  ...+++..+..+.+.+++.+.|++++++...   ..     ..|+++.+++.       ..++++++.+++..+
T Consensus       229 ~~l~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~-------~~l~~~ei~~~~~~~  291 (482)
T 3k9v_A          229 KRLN--TKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQ---QP-----GADFLCDIYQQ-------DHLSKKELYAAVTEL  291 (482)
T ss_dssp             HHHT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CT-----TSCHHHHHHHH-------TCCCHHHHHHHHHHH
T ss_pred             HhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CC-----chHHHHHHHhc-------cCCCHHHHHHHHHHH
Confidence            2221  2344566677788888889999998876422   22     46788888764       268999999999999


Q ss_pred             HhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------Ee
Q 048482          222 FVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VR  281 (403)
Q Consensus       222 ~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~  281 (403)
                      ++||+|||+++++|++++|++||++|+||++||+++++.+..++++++.+||||+|||                    ++
T Consensus       292 ~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~  371 (482)
T 3k9v_A          292 QLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTV  371 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEE
T ss_pred             HHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCcee
Confidence            9999999999999999999999999999999999999987788999999999999999                    78


Q ss_pred             ecccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHh
Q 048482          282 WRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLY  361 (403)
Q Consensus       282 ~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~  361 (403)
                      ++||.|||||.|.++.+++||||++|+||++|+||||++.+.  ...+..|+|||+|+|.|+|++||++|++++|+.|++
T Consensus       372 ~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~--~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~  449 (482)
T 3k9v_A          372 LGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK--KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQ  449 (482)
T ss_dssp             ETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGGTCTTS--CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHH
T ss_pred             eCCEEECCCCEEEEccccccCCCccCCCcCccCccccCCCCC--CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999998653  245678999999999999999999999999999999


Q ss_pred             cceeecCCCCccCCccccccCCcccccCCCceeeeccC
Q 048482          362 WFDWNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLY  399 (403)
Q Consensus       362 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  399 (403)
                      +|++++.++.   +  .......++.|+.+++|++++|
T Consensus       450 ~f~~~~~~~~---~--~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          450 KYDIVATDNE---P--VEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             HEEEEESCCC---C--CCEEESSSEEESSSCCEEEEEC
T ss_pred             hcEEeccCCC---C--cccccceeecCCCCcceEEeeC
Confidence            9999976543   2  2233456778888999999887


No 10 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=6.3e-59  Score=447.03  Aligned_cols=379  Identities=22%  Similarity=0.310  Sum_probs=296.0

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHH--HhhhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVR--RVQSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~--~l~~~~~~i~~~~~   80 (403)
                      ..+++||+++++||.+++..|++++......... .+.+++++ +|+.|+++||++ .+.|+..  .++.+.+.+.++++
T Consensus        56 ~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~-~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~  132 (476)
T 1po5_A           56 VVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIF-QGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEAR  132 (476)
T ss_dssp             EEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCC-SSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhc-CCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHH
Confidence            3688999999999987777888776433232222 24555555 699999999997 7888877  45778999999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-----chhhHHHHHHHHHHHhcccc-----cchhhhhhhhhhh
Q 048482           81 SLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-----QSNKFGELLRRLEEQFAAFC-----VGDTFLFLGCLDV  146 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~~~~~~  146 (403)
                      .+++.|...   .++.+|+.+++..+++++    .|+     .+.++......+...+....     ....+|++  +.+
T Consensus       133 ~l~~~l~~~---~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~~~  207 (476)
T 1po5_A          133 CLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF--LKH  207 (476)
T ss_dssp             HHHHHHHHT---TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHH--HHT
T ss_pred             HHHHHHHhc---CCCccCHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHH--HHh
Confidence            999999864   457899999999999999    222     22345555544444442211     12234431  122


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhc--CCCCCCCCHHHHHHHHHHHHhc
Q 048482          147 LSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKD--GMLGAELSQDNLKAVILDMFVA  224 (403)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~~s~~~i~~~~~~~~~a  224 (403)
                      ++...++..++.+.+.+++.+.|+++++....   ..     ..|+++.|++...+  +.++..++++++++++..+++|
T Consensus       208 lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~A  279 (476)
T 1po5_A          208 FPGTHRQIYRNLQEINTFIGQSVEKHRATLDP---SN-----PRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFA  279 (476)
T ss_dssp             SSCSHHHHHHHHHHHHHHHHHHHHHHHTTCCT---TS-----CCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CC-----cccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhh
Confidence            23444667778889999999999998875311   22     57999999865432  1112358999999999999999


Q ss_pred             CccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------Eeec
Q 048482          225 GTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------VRWR  283 (403)
Q Consensus       225 g~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------~~~~  283 (403)
                      |+|||+++++|++++|++||++|+||++||+++++.+..++++++.+||||+|||                     ++++
T Consensus       280 G~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~  359 (476)
T 1po5_A          280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR  359 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEET
T ss_pred             ccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceec
Confidence            9999999999999999999999999999999999877778999999999999999                     7889


Q ss_pred             ccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc
Q 048482          284 DYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF  363 (403)
Q Consensus       284 g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f  363 (403)
                      ||.|||||.|.++.+++||||++|+||++|+||||++++... ..+..|+|||+|+|.|+|++||++|++++|+.|+++|
T Consensus       360 g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f  438 (476)
T 1po5_A          360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGAL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF  438 (476)
T ss_dssp             TEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCCCCc-cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhce
Confidence            999999999999999999999999999999999999754322 2456899999999999999999999999999999999


Q ss_pred             eeecCCCCccCCccccc-cCCcccccCCCceeeeccCCC
Q 048482          364 DWNLPLGKVEENLNMFE-VNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       364 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      ++++.++..  ..+... ..++++.| .+++|++++|+.
T Consensus       439 ~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          439 SIASPVPPE--DIDLTPRESGVGNVP-PSYQIRFLARHH  474 (476)
T ss_dssp             EEECSSCGG--GCCCCCCSTTSSCCC-CCCCBEEEECC-
T ss_pred             EEeCCCCCC--CCCccCCcCceeecC-cceEEEEEecCC
Confidence            999876532  112223 45667777 589999999974


No 11 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=1e-58  Score=445.80  Aligned_cols=379  Identities=22%  Similarity=0.291  Sum_probs=292.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHH--HhhhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVR--RVQSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~--~l~~~~~~i~~~~~   80 (403)
                      .++++||+++++||.+++..|++++......... .+.+++++ +|+.|+++||++ .+.|+..  .++.+.+.+.++++
T Consensus        57 ~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~-~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~  133 (477)
T 1r9o_A           57 IVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEAR  133 (477)
T ss_dssp             EEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTT-CTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhcccHhhCCCCcchhhhhcc-CCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHH
Confidence            4688999999999987777888776543222221 24555555 699999999997 7888876  45778999999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-----chhhHHHHHHHHHHHhcc---c--ccchhhhhhhhhhh
Q 048482           81 SLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-----QSNKFGELLRRLEEQFAA---F--CVGDTFLFLGCLDV  146 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-----~~~~~~~~~~~~~~~~~~---~--~~~~~~p~~~~~~~  146 (403)
                      .+++.|...   .++.+|+.+++..+++++    .|+     .+.++......+...+..   .  .+...+|++.  ..
T Consensus       134 ~l~~~l~~~---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~--~~  208 (477)
T 1r9o_A          134 CLVEELRKT---KASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPII--DY  208 (477)
T ss_dssp             HHHHHHHTT---TTSCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCC--SC
T ss_pred             HHHHHHHhc---CCCccChHHHHHHHHHHHHHHHHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHH--Hh
Confidence            999999764   456899999999999998    222     222344444443333311   1  1223455421  11


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhc--CCCCCCCCHHHHHHHHHHHHhc
Q 048482          147 LSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKD--GMLGAELSQDNLKAVILDMFVA  224 (403)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~~s~~~i~~~~~~~~~a  224 (403)
                      ++...++..++...+.+++.++|+++++....   ..     ..|+++.|++...+  +.++..++++++++++..+++|
T Consensus       209 lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~A  280 (477)
T 1r9o_A          209 FPGTHNKLLKNVAFMKSYILEKVKEHQESMDM---NN-----PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGA  280 (477)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCT---TC-----CCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CC-----chHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhc
Confidence            23334667778888999999999998875311   22     57999999865432  1113469999999999999999


Q ss_pred             CccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------Eeec
Q 048482          225 GTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------VRWR  283 (403)
Q Consensus       225 g~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------~~~~  283 (403)
                      |+|||+.+++|++++|++||++|+||++||+++++.+..++++++.+||||+|||                     ++++
T Consensus       281 G~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~  360 (477)
T 1r9o_A          281 GTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFR  360 (477)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEET
T ss_pred             ccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCcccc
Confidence            9999999999999999999999999999999999877778999999999999999                     7889


Q ss_pred             ccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc
Q 048482          284 DYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF  363 (403)
Q Consensus       284 g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f  363 (403)
                      |+.|||||.|.++.+++||||++|+||++|+||||++.+... ..+..|+|||+|+|.|+|++||++|++++|+.|+++|
T Consensus       361 g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~~~-~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  439 (477)
T 1r9o_A          361 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNF-KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNF  439 (477)
T ss_dssp             TEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSCB-CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             ceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCCCc-CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999754322 2456899999999999999999999999999999999


Q ss_pred             eeecCCCCccCCccccc-cCCcccccCCCceeeeccCCC
Q 048482          364 DWNLPLGKVEENLNMFE-VNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       364 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      +|++.++..  ..+... ..+++..| .+++|++++|+.
T Consensus       440 ~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~~~~~~R~~  475 (477)
T 1r9o_A          440 NLKSLVDPK--NLDTTPVVNGFASVP-PFYQLCFIPIHH  475 (477)
T ss_dssp             EEEESSCGG--GCCCCCBCCSSSCBC-CCCCEEEEECCC
T ss_pred             EEecCCCCC--CCCccCCcCceeecC-CCeEEEEEEecc
Confidence            999876532  111222 45666666 589999999874


No 12 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=6.3e-59  Score=448.52  Aligned_cols=377  Identities=18%  Similarity=0.184  Sum_probs=284.9

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccc---eeeccccceecCCCchhhHHHHhHHHHh-hchHHHhhhhhhhHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPAN---ILLYECQGIGFSNYGEYWRQVRKICVLQ-LLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~---~~~~~~~~~~~~~~g~~w~~~Rk~~~~~-~f~~~~l~~~~~~i~~~~   79 (403)
                      .+++||+++++||.++ ..|++|+......   .....+.+ +++.+|+.|+++||++ .+ +|+.+.++.+.+.+++++
T Consensus        59 vvv~dp~~~~~il~~~-~~f~~r~~~~~~~~~~~~~~~~~~-l~~~~g~~w~~~Rr~l-~~~~fs~~~l~~~~~~i~~~~  135 (487)
T 3n9y_A           59 VYVIDPEDVALLFKSE-GPNPERFLIPPWVAYHQYYQRPIG-VLLKKSAAWKKDRVAL-NQEVMAPEATKNFLPLLDAVS  135 (487)
T ss_dssp             EEECCHHHHHHHHHTC-CSSCCCCCCHHHHHHHHHTTCCCC-GGGCCHHHHHHHHHHH-HHHHTSHHHHTTHHHHHHHHH
T ss_pred             EEEcCHHHHHHHHHhC-CCCCCCCCCcHHHHHHHHccccCC-CccCCcHHHHHHHHhc-CcccCCchHHHHhhhHHHHHH
Confidence            6889999999999765 4788877543221   11112344 4555699999999998 66 699999999999999999


Q ss_pred             HHHHHHHHHhcc---CCCCceeHHHHHHHHHhhc----cCC-------c--hhhHHHHHHHHHHHhcccccchhhhh--h
Q 048482           80 SSLITKIRLSCF---NKGSPLNLLEMLLIASKEE----NTG-------Q--SNKFGELLRRLEEQFAAFCVGDTFLF--L  141 (403)
Q Consensus        80 ~~li~~l~~~~~---~~~~~vd~~~~~~~~~~~v----~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~p~--~  141 (403)
                      +++++.|.+...   .++..+|+.+++..+++++    .|+       .  +.........+...+........+|.  +
T Consensus       136 ~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~  215 (487)
T 3n9y_A          136 RDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLF  215 (487)
T ss_dssp             HHHHHHHHHHHHHHTSSSEEECCHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHH
T ss_pred             HHHHHHHHHHhcccccCCCCccHHHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence            999999987431   2345799999999999999    221       1  12222333333333222112222232  1


Q ss_pred             hhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHH
Q 048482          142 GCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDM  221 (403)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~  221 (403)
                      .++.  ...+++..+..+.+.+++.+.|+++.++.......   .....|+++.|++.       ..++++++++++..+
T Consensus       216 ~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~  283 (487)
T 3n9y_A          216 RLFR--TKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSV---HHDYRGILYRLLGD-------SKMSFEDIKANVTEM  283 (487)
T ss_dssp             HHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSSCCCHHHHHHHS-------CSSCHHHHHHHHHHH
T ss_pred             hhcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---ccchHHHHHHHHhc-------CCCCHHHHHHHHHHH
Confidence            1111  22334455555666667777776655432110010   11257899999874       268999999999999


Q ss_pred             HhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------Ee
Q 048482          222 FVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VR  281 (403)
Q Consensus       222 ~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~  281 (403)
                      ++||+|||+++++|++++|++||++|+||++||+++.+....++++++.+||||+|||                    ++
T Consensus       284 ~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~  363 (487)
T 3n9y_A          284 LAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLV  363 (487)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEE
T ss_pred             HHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCcee
Confidence            9999999999999999999999999999999999999876666799999999999999                    78


Q ss_pred             ecccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHh
Q 048482          282 WRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLY  361 (403)
Q Consensus       282 ~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~  361 (403)
                      ++||.|||||.|+++.+++||||++|+||++|+||||++.+.  ...+..++|||.|+|.|+|++||++|++++|+.|++
T Consensus       364 ~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~--~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~  441 (487)
T 3n9y_A          364 LRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDK--NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLE  441 (487)
T ss_dssp             ETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTCSCT--TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHH
T ss_pred             eCCEEECCCCEEEeCcHHhcCCcccCCCcccCChhhcCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998542  234678999999999999999999999999999999


Q ss_pred             cceeecCCCCccCCccccccCCcccccCCCceeeeccCCCC
Q 048482          362 WFDWNLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSPY  402 (403)
Q Consensus       362 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  402 (403)
                      +|+|++.++.   +  +....++++.|+.+++|++++|+++
T Consensus       442 ~f~~~~~~~~---~--~~~~~~~~~~p~~~~~~~~~~r~~~  477 (487)
T 3n9y_A          442 NFRVEIQHLS---D--VGTTFNLILMPEKPISFTFWPFNQE  477 (487)
T ss_dssp             HEEEECTTCC---C--CCEEESSSEEESSCCCEEEEEC---
T ss_pred             hCEEEecCCc---c--cccceeeeecCCCCceeEEEECCcc
Confidence            9999987652   2  3334567888999999999999875


No 13 
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=3.4e-58  Score=442.15  Aligned_cols=378  Identities=21%  Similarity=0.267  Sum_probs=295.9

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHh--hhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRV--QSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l--~~~~~~i~~~~~   80 (403)
                      ..+++||+++++||.+++..|++++.......+.  +.++++ .+|+.|+++||+. .+.|+...+  ..+.+.+.++++
T Consensus        56 ~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~~~--~~~l~~-~~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~  131 (476)
T 3e6i_A           56 MVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHR--DRGIIF-NNGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAH  131 (476)
T ss_dssp             EEEECSHHHHHHHHHTSTTTTCEECCCGGGGGGT--TSSSTT-CCSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhcchHhhCCCCCCchhheec--CCCEEe-cCCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHH
Confidence            3679999999999998888898887655444332  235554 4599999999987 677765443  346799999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhhc----c----CC-chhhHHHHHHHHHHHhcccc-----cchhhh-hhhhhh
Q 048482           81 SLITKIRLSCFNKGSPLNLLEMLLIASKEE----N----TG-QSNKFGELLRRLEEQFAAFC-----VGDTFL-FLGCLD  145 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~----~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~p-~~~~~~  145 (403)
                      .+++.|.+.   .++.+|+.+++..+++++    .    ++ .++++......+...+....     ....+| ++.+  
T Consensus       132 ~l~~~l~~~---~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--  206 (476)
T 3e6i_A          132 FLLEALRKT---QGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHY--  206 (476)
T ss_dssp             HHHHHHHTT---TTSCBCTHHHHTHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTT--
T ss_pred             HHHHHHHHh---CCCCcChHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH--
Confidence            999999764   567899999999999998    2    22 23344444444443332211     112233 3322  


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCC--CCCCCCHHHHHHHHHHHHh
Q 048482          146 VLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGM--LGAELSQDNLKAVILDMFV  223 (403)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~s~~~i~~~~~~~~~  223 (403)
                       ++...++..+..+.+.+++.+.|+++++....   ..     ..|+++.|++...++.  .+..++++++++++..+++
T Consensus       207 -lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-----~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~  277 (476)
T 3e6i_A          207 -LPGSHRKVIKNVAEVKEYVSERVKEHHQSLDP---NC-----PRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFF  277 (476)
T ss_dssp             -SCSHHHHHHHHHHHHHHHHHHHHHHHHHTCCT---TS-----CCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHH
T ss_pred             -cCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---CC-----CccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHh
Confidence             24456677888899999999999999876422   22     5689999998765432  2346899999999999999


Q ss_pred             cCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---------------------Eee
Q 048482          224 AGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---------------------VRW  282 (403)
Q Consensus       224 ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---------------------~~~  282 (403)
                      ||+|||+++++|++++|++||++|+||++||+++.+.+..++++++.+||||+|||                     +++
T Consensus       278 AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~  357 (476)
T 3e6i_A          278 AGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIF  357 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE
T ss_pred             cchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeE
Confidence            99999999999999999999999999999999999877788999999999999999                     788


Q ss_pred             cccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhc
Q 048482          283 RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYW  362 (403)
Q Consensus       283 ~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~  362 (403)
                      +||.|||||.|+++.+++||||++|+||++|+||||++.+.. ...+..|+|||+|+|.|+|++||++|++++|+.|+++
T Consensus       358 ~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~  436 (476)
T 3e6i_A          358 RGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGK-FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQH  436 (476)
T ss_dssp             TTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSS-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCCCCC-ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999976533 2346689999999999999999999999999999999


Q ss_pred             ceeecCCCCccCCccccc-cCCcccccCCCceeeeccCCCC
Q 048482          363 FDWNLPLGKVEENLNMFE-VNGLVVHKKLPLHPVPTLYSPY  402 (403)
Q Consensus       363 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~~~  402 (403)
                      |+|++..+..  .++... ..+++..|+ +++|++++|+..
T Consensus       437 f~~~~~~~~~--~~~~~~~~~~~~~~p~-~~~~~~~~R~~~  474 (476)
T 3e6i_A          437 FNLKPLVDPK--DIDLSPIHIGFGCIPP-RYKLCVIPRSHH  474 (476)
T ss_dssp             EEEEESSCTT--TCCCSCSEESSSEECC-CCCEEEEECC--
T ss_pred             cEeecCCCCC--CCCCCcccCccccCCC-CeEEEEEecccc
Confidence            9999754432  233332 256666665 799999999864


No 14 
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=6.1e-60  Score=452.28  Aligned_cols=366  Identities=17%  Similarity=0.255  Sum_probs=289.5

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSLI   83 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~li   83 (403)
                      +|++||+++++||.+++..|+.++......... .|.+++++.+|+.|+.+|+++ .+.|+...++.+.+.+++++.+++
T Consensus        58 vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~  135 (461)
T 3ld6_A           58 TYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPV-FGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYF  135 (461)
T ss_dssp             EEECSHHHHHHHHHCCTTTEESHHHHHHHHHHH-HCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEeCHHHHHHHHhCCccccCCCcchhhhhhcc-CCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHH
Confidence            688999999999998888887765432222111 257777777899999999998 899999999999999999999999


Q ss_pred             HHHHHhccCCCCceeHHHHHHHHHhhc----cCCc------hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHH
Q 048482           84 TKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ------SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        84 ~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  153 (403)
                      +.|.     ++..+|+.+.+..+++++    .|+.      .+.+......+...+..  ....+|.+  ++  .....+
T Consensus       136 ~~~~-----~~~~~~~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~--~~~~~~  204 (461)
T 3ld6_A          136 ESWG-----ESGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSH--AAWLLPGW--LP--LPSFRR  204 (461)
T ss_dssp             GGGC-----SEEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSSH--HHHHSCTT--SC--CHHHHH
T ss_pred             HHHh-----hcCCccHHHHHHHHHHHHHHHHHcCcchhhhhhhhhhhhhhhhhhhhhh--HHHhhhhh--cc--CcHHHH
Confidence            8885     445789999999999888    2331      12222222222211111  11122221  11  134456


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTL  233 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l  233 (403)
                      ..++.+.+.+++.+.|++++.+..     .     .+|+++.|++...+++  ..++++++++.+..+++||+|||+.++
T Consensus       205 ~~~~~~~l~~~~~~~i~~r~~~~~-----~-----~~d~l~~ll~~~~~~~--~~ls~~ei~~~~~~~~~aG~dTt~~~l  272 (461)
T 3ld6_A          205 RDRAHREIKDIFYKAIQKRRQSQE-----K-----IDDILQTLLDATYKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTS  272 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCC-----C-----CCSHHHHHHTCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC-----C-----CcchhhhhHHhhhccc--CCCCHHHHHHHHHhhhhcccccccccc
Confidence            677888899999999998876532     2     6799999998765543  479999999999999999999999999


Q ss_pred             HHHHHHHhhChhhHHHHHHHHHHHhcCC-CcCChhhccCCCcceEEE--------------------EeecccccCCCcE
Q 048482          234 EWAMAELVKNPTSMKRAREEVRSVAKGK-LNIDMKDIEKMDYLKCVS--------------------VRWRDYNILAKTR  292 (403)
Q Consensus       234 ~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i--------------------~~~~g~~ip~Gt~  292 (403)
                      +|++++|+.||++|+||++|++++.+.. ...+++++.+||||+|||                    ++++||.|||||.
T Consensus       273 ~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~  352 (461)
T 3ld6_A          273 AWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQ  352 (461)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCE
T ss_pred             hhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHHhhhhheeeeccccCCchhccccccccceeeCCcccCCCCe
Confidence            9999999999999999999999999864 456889999999999999                    8899999999999


Q ss_pred             EEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCCCc
Q 048482          293 VIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKV  372 (403)
Q Consensus       293 v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  372 (403)
                      |+++.+++||||++|+||++|+||||++++.. ...+..|+|||+|+|.|+|++||++|++++|+.|+++|+|++.++..
T Consensus       353 v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~  431 (461)
T 3ld6_A          353 VCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF  431 (461)
T ss_dssp             EEECHHHHTTCTTTCTTTTSCCGGGGGSCCHH-HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC
T ss_pred             eeechHhhcCCccccCCccccCccccCCCCcc-cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCC
Confidence            99999999999999999999999999986532 23466899999999999999999999999999999999999887643


Q ss_pred             cCCccccccCCcccccCCCceeeeccCC
Q 048482          373 EENLNMFEVNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~v~~~~r~  400 (403)
                      +    .....+++..|+ ++.|++++|+
T Consensus       432 ~----~~~~~~~~~~p~-~~~v~~~~Rs  454 (461)
T 3ld6_A          432 P----TVNYTTMIHTPE-NPVIRYKRRS  454 (461)
T ss_dssp             C----CBCCSSSSCCBS-SCEEEEEECC
T ss_pred             C----cccccceEEcCC-ceEEEEEECC
Confidence            2    122234444444 7889999997


No 15 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=4.9e-58  Score=444.08  Aligned_cols=373  Identities=20%  Similarity=0.290  Sum_probs=295.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCcc-ceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPA-NILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS   81 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~-~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~   81 (403)
                      .++++||+++++||.+  ..|++++..... ......+.+++++.+|+.|+++||++ .+.|+...++++.+.+.+++.+
T Consensus        94 ~vvv~~p~~~~~il~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~  170 (503)
T 3s79_A           94 TLIISKSSSMFHIMKH--NHYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKT  170 (503)
T ss_dssp             EEEECCHHHHHHHHHS--GGGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhc--CCCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHH
Confidence            4689999999999953  467777654322 22223456777888899999999998 8999999999999999999999


Q ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhhc----cCCc---hhhHHHHHHHHHHHhcccc-cchhhhhhhhhhhhhchHHH
Q 048482           82 LITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ---SNKFGELLRRLEEQFAAFC-VGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        82 li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~  153 (403)
                      +++.|.... +.++.+|+.++++.+++++    .|+.   +.++...+..+...+.... ....+..      +++..++
T Consensus       171 ~l~~l~~~~-~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  243 (503)
T 3s79_A          171 HLDRLEEVT-NESGYVDVLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFK------ISWLYKK  243 (503)
T ss_dssp             HHTTGGGTB-CTTSCBCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHHHHH------SGGGTHH
T ss_pred             HHHHHHHHh-cCCCeEcHHHHHHHHHHHHHHHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHHHhh------cchhHHH
Confidence            999887643 3456899999999999999    2332   3344444444433322211 1111111      1233466


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTL  233 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l  233 (403)
                      ..++.+.+.+++.++|+++++....+....    ...|+++.|++...++    +++++++++.+..+++||+|||++++
T Consensus       244 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~~Tta~~l  315 (503)
T 3s79_A          244 YEKSVKDLKDAIEVLIAEKRRRISTEEKLE----ECMDFATELILAEKRG----DLTRENVNQCILEMLIAAPDTMSVSL  315 (503)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCTTTT----TTCCHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccc----hHHHHHHHHHHhcccC----CCCHHHHHHHHHHHHHHcccHHHHHH
Confidence            778888999999999999887653311111    1459999999876543    79999999999999999999999999


Q ss_pred             HHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------EeecccccCCCcEE
Q 048482          234 EWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRDYNILAKTRV  293 (403)
Q Consensus       234 ~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g~~ip~Gt~v  293 (403)
                      +|++++|++||++|+|+++||+++++ +..++++++.+||||+|||                    ++++||.|||||.|
T Consensus       316 ~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v  394 (503)
T 3s79_A          316 FFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNI  394 (503)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEE
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEE
Confidence            99999999999999999999999998 5678999999999999999                    78999999999999


Q ss_pred             EEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCCCcc
Q 048482          294 IVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVE  373 (403)
Q Consensus       294 ~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~  373 (403)
                      +++.+++||| ++|+||++|+||||++..     ....|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++...
T Consensus       395 ~~~~~~~~~d-~~~~dp~~F~PeRf~~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~  468 (503)
T 3s79_A          395 ILNIGRMHRL-EFFPKPNEFTLENFAKNV-----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCV  468 (503)
T ss_dssp             EECHHHHTTT-SSCSSTTSCCGGGGSSCC-----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCT
T ss_pred             EeehHHhCCC-ccCCChhhCChhhcCCCC-----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCc
Confidence            9999999998 999999999999999652     3457999999999999999999999999999999999998766432


Q ss_pred             CCccccccCCcccccCCC---ceeeeccCCCC
Q 048482          374 ENLNMFEVNGLVVHKKLP---LHPVPTLYSPY  402 (403)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~---~~v~~~~r~~~  402 (403)
                      +  +.....+++..|+.+   ++|++++|+..
T Consensus       469 ~--~~~~~~~~~~~p~~~~~~~~v~~~~R~~~  498 (503)
T 3s79_A          469 E--SIQKIHDLSLHPDETKNMLEMIFTPRNSD  498 (503)
T ss_dssp             T--TSCEEESSSEEECTTSCCCCEEEEECC--
T ss_pred             c--ccccccceeecCCCccceeeEEeccCCch
Confidence            2  334456777777765   99999999863


No 16 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=5.3e-58  Score=442.66  Aligned_cols=380  Identities=20%  Similarity=0.337  Sum_probs=292.5

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecC-CCchhhHHHHhHHHHhhchHH---Hh---h---hhhh
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFS-NYGEYWRQVRKICVLQLLSVR---RV---Q---SFQH   73 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~-~~g~~w~~~Rk~~~~~~f~~~---~l---~---~~~~   73 (403)
                      .+++||+++++||.+++..|++++.......+. .+.+++++ .+|+.|+++||++ ++.|+..   ++   +   .+.+
T Consensus        62 vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~~-~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~  139 (495)
T 2hi4_A           62 LVLSRLDTIRQALVRQGDDFKGRPDLYTSTLIT-DGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEE  139 (495)
T ss_dssp             EEECSHHHHHHHHTTTGGGSCBCCCCHHHHTST-TSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHH
T ss_pred             EEECCHHHHHHHHHhcchhhCCCCCcHHHHHhc-CCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHH
Confidence            578999999999987777898887543322222 24566666 4699999999998 7876532   22   2   6899


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-----chhhHHHHHHHHHHHhc---ccccchhhhhh
Q 048482           74 VRDGEVSSLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-----QSNKFGELLRRLEEQFA---AFCVGDTFLFL  141 (403)
Q Consensus        74 ~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~p~~  141 (403)
                      .+.++++.+++.|.... .+++.+|+.+++..+++++    .|+     .+.++.........++.   .......+|++
T Consensus       140 ~i~~~~~~l~~~l~~~~-~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l  218 (495)
T 2hi4_A          140 HVSKEAKALISRLQELM-AGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPIL  218 (495)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTSCBCHHHHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGG
T ss_pred             HHHHHHHHHHHHHHHhc-cCCCccchHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHH
Confidence            99999999999998743 2466899999999999998    222     12233333322222222   22234456665


Q ss_pred             hhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcC--CCCCCCCHHHHHHHHH
Q 048482          142 GCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDG--MLGAELSQDNLKAVIL  219 (403)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~~s~~~i~~~~~  219 (403)
                      .+++  ....++..++.+.+.+++.+.|+++++....   ..     ..|+++.|++...+.  .++..++++++++++.
T Consensus       219 ~~lp--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~  288 (495)
T 2hi4_A          219 RYLP--NPALQRFKAFNQRFLWFLQKTVQEHYQDFDK---NS-----VRDITGALFKHSKKGPRASGNLIPQEKIVNLVN  288 (495)
T ss_dssp             GGSC--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCCT---TC-----CCSHHHHHHHHHHHCCEETTEECCTHHHHTHHH
T ss_pred             HhcC--chHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cc-----cccHHHHHHHHhhhccCccccCCCHHHHHHHHH
Confidence            4442  1245667788889999999999999876321   22     579999999764321  1123589999999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------
Q 048482          220 DMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------  279 (403)
Q Consensus       220 ~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------  279 (403)
                      .+++||+|||+++++|++++|++||++|+||++||+++.+.+..++++++.+||||+|||                    
T Consensus       289 ~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~  368 (495)
T 2hi4_A          289 DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTR  368 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSS
T ss_pred             HHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCC
Confidence            999999999999999999999999999999999999999877778999999999999999                    


Q ss_pred             -EeecccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccC-C-CCCCccccccCCCCCCCCChHHHHHHHHHHH
Q 048482          280 -VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVD-C-KSQDFEFISFGAGRRGYLGTSFALVEVEYVI  356 (403)
Q Consensus       280 -~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~-~-~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l  356 (403)
                       ++++|+.|||||.|.++.+++||||++|+||++|+||||++.+.. . ...+..|+|||+|+|.|+|++||++|++++|
T Consensus       369 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~l  448 (495)
T 2hi4_A          369 DTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFL  448 (495)
T ss_dssp             CEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHH
T ss_pred             CeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence             788999999999999999999999999999999999999975422 0 1235679999999999999999999999999


Q ss_pred             HHHHhcceeecCCCCccCCccccccCCcccccCCCc-eeeeccCCC
Q 048482          357 ANLLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPL-HPVPTLYSP  401 (403)
Q Consensus       357 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~r~~  401 (403)
                      +.|+++|+|++.++..   .++....+++..|. ++ +|+++ |..
T Consensus       449 a~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~-~~~~v~~~-R~~  489 (495)
T 2hi4_A          449 AILLQQLEFSVPPGVK---VDLTPIYGLTMKHA-RCEHVQAR-RFS  489 (495)
T ss_dssp             HHHHHHCEEECCTTCC---CCCCCBCSSSCBCC-CCCCBEEE-CCC
T ss_pred             HHHHHhCEEeCCCCCC---CCccccCCceecCC-CcceEEEE-Ecc
Confidence            9999999999875532   22333457777776 45 88888 753


No 17 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=4e-58  Score=437.39  Aligned_cols=360  Identities=21%  Similarity=0.267  Sum_probs=284.0

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeecccc-ceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQ-GIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS   81 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~-~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~   81 (403)
                      .++++||+++++|+.+++..|+.+.. .....+.  |. ++++ .+|+.|+.+|+++ .+.|++++++.+.+.+++++++
T Consensus        56 ~vvv~~~~~~~~il~~~~~~~~~~~~-~~~~~~~--g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~  130 (444)
T 2ve3_A           56 VIFISGALANRFLFTKEQETFQATWP-LSTRILL--GPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQG  130 (444)
T ss_dssp             EEEECSHHHHHHHTSSCTTTEEEECC-HHHHHHH--CTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHhCCCcccccchh-HHHHHHh--Ccccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHH
Confidence            46899999999999876656763321 1111111  33 4444 5699999999998 8999999999999999999999


Q ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC-ch---hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHH
Q 048482           82 LITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG-QS---NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        82 li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  153 (403)
                      +++.|.     .++.+|+.+.+..+++++    .|+ ..   .++.+.+..+...+..  +...+|        ...+++
T Consensus       131 l~~~l~-----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~p--------~~~~~~  195 (444)
T 2ve3_A          131 YLEQWG-----KANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFS--LPIPLP--------NTLFGK  195 (444)
T ss_dssp             HHHHHH-----HSSEEEHHHHHHHHHHHHHHHHHTCHHHHSCTTHHHHHHHHHHHHSS--CCCCST--------TSHHHH
T ss_pred             HHHHhc-----CCCcEeHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHHhc--CCccCC--------CcHHHH
Confidence            999995     345799999999999999    344 11   2333333333222111  111111        112345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTL  233 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l  233 (403)
                      ..++.+.+.+++.++|+++++..     ..     .+|+++.|++...++  +..++++++++++..+++||+|||+.++
T Consensus       196 ~~~~~~~~~~~~~~~i~~r~~~~-----~~-----~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~Tt~~~l  263 (444)
T 2ve3_A          196 SQRARALLLAELEKIIKARQQQP-----PS-----EEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSAL  263 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSC-----CC-----CSSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-----CC-----ccCHHHHHHhccccC--CCCCCHHHHHHHHHHHHHHcchHHHHHH
Confidence            66778889999999999988652     12     679999999875432  2369999999999999999999999999


Q ss_pred             HHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------EeecccccCCCcEE
Q 048482          234 EWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRDYNILAKTRV  293 (403)
Q Consensus       234 ~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g~~ip~Gt~v  293 (403)
                      +|++++|++||++|+||++|++.+.+.. .++++++.+||||+|||                    ++++||.|||||.|
T Consensus       264 ~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V  342 (444)
T 2ve3_A          264 SSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLV  342 (444)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHTTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECTTCEE
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhhcChHHHHHHHHHHhcCCCccCccceeCCCeeECCEEECCCCEE
Confidence            9999999999999999999999988755 68999999999999999                    78899999999999


Q ss_pred             EEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCCCcc
Q 048482          294 IVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVE  373 (403)
Q Consensus       294 ~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~  373 (403)
                      .++.+++||||++|+||++|+||||++.+......++.|+|||+|+|.|+|++||++|++++|+.|+++|++++.++.. 
T Consensus       343 ~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-  421 (444)
T 2ve3_A          343 SYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQN-  421 (444)
T ss_dssp             EEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCC-
T ss_pred             EechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCC-
Confidence            9999999999999999999999999975432334556799999999999999999999999999999999999865532 


Q ss_pred             CCccccccCCcccccCCCceeeeccCC
Q 048482          374 ENLNMFEVNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~v~~~~r~  400 (403)
                          .....+.++.|..+++|++++|+
T Consensus       422 ----~~~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          422 ----LELVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             ----CCEEESSSEEETTCCEEEEEEC-
T ss_pred             ----cceeccccccCCCCceEEEEeCC
Confidence                12233556778889999999884


No 18 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=1.4e-57  Score=434.91  Aligned_cols=368  Identities=15%  Similarity=0.251  Sum_probs=267.4

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSLI   83 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~li   83 (403)
                      +|++||+++++||.+++..|++++........  .|.++ +. +|+.|+.+|+++ ++.|+.+.++.+.+.+.++++.++
T Consensus        51 ~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~--~g~~~-~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~  125 (455)
T 2cib_A           51 VLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI--FGEGV-VF-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMI  125 (455)
T ss_dssp             EEECSHHHHHHHHHCCTTTEECTTSCGGGHHH--HC-----------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHhcCccccCcccchhHHHhh--cCCcc-cc-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHH
Confidence            56799999999998766678877643222111  13343 33 599999999998 899999999999999999999999


Q ss_pred             HHHHHhccCCCCceeHHHHHHHHHhhc----cCCc------hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHH
Q 048482           84 TKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ------SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        84 ~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  153 (403)
                      +.|.     .++.+|+.+++..+++++    .|+.      +.++.+....+...+  .....++|++.     ....++
T Consensus       126 ~~~~-----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~-----~~~~~~  193 (455)
T 2cib_A          126 ADWG-----EAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGT--DPLAYVDPYLP-----IESFRR  193 (455)
T ss_dssp             TTCC-----SEEEEEHHHHHHHHHHHHHHHHHTCHHHHTTCCHHHHHHHHHHHTTC--CGGGGTCTTCS-----CHHHHH
T ss_pred             HHhC-----CCCcEeHHHHHHHHHHHHHHHHHcCCCcchhhhHHHHHHHHHHHhhh--hHHHHhcccCC-----ChhHHH
Confidence            9874     235799999999999998    2321      234444444332111  11122334321     123345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCC-CCHHHHHHHHHHHHhcCccchHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAE-LSQDNLKAVILDMFVAGTDTTATT  232 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~-~s~~~i~~~~~~~~~ag~~tt~~~  232 (403)
                      ..++...+.+++.++|+++++....   ..    ...|+++.|++...+++  .. ++++++++++..+++||+|||+++
T Consensus       194 ~~~~~~~~~~~~~~~i~~r~~~~~~---~~----~~~dll~~ll~~~~~~~--~~~l~~~~i~~~~~~l~~AG~eTta~~  264 (455)
T 2cib_A          194 RDEARNGLVALVADIMNGRIANPPT---DK----SDRDMLDVLIAVKAETG--TPRFSADEITGMFISMMFAGHHTSSGT  264 (455)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCC------------CCCHHHHHHHCBCTTS--SBSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccC---CC----CcccHHHHHHHhhhhcC--CCCCCHHHHHHHHHHHHHhccccHHHH
Confidence            6677888999999999998875321   11    02399999998754332  24 899999999999999999999999


Q ss_pred             HHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------EeecccccCCCcE
Q 048482          233 LEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRDYNILAKTR  292 (403)
Q Consensus       233 l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g~~ip~Gt~  292 (403)
                      ++|++++|++||++|+||++||+++.+.+..++++++.+||||+|||                    ++++||.|||||.
T Consensus       265 l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~  344 (455)
T 2cib_A          265 ASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDL  344 (455)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCE
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHHHHHHhcCCcccccceeeCCCceECCEEECCCCE
Confidence            99999999999999999999999999876678899999999999999                    7889999999999


Q ss_pred             EEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCCCc
Q 048482          293 VIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKV  372 (403)
Q Consensus       293 v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  372 (403)
                      |+++.+++||||++|+||++|+||||++.+......+..|+|||+|+|.|+|++||++|++++|+.|+++|+|++..+  
T Consensus       345 V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~--  422 (455)
T 2cib_A          345 VAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP--  422 (455)
T ss_dssp             EEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC--
T ss_pred             EEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC--
Confidence            999999999999999999999999999653211113567999999999999999999999999999999999998632  


Q ss_pred             cCCcccc-ccCCcccccCCCceeeeccCCC
Q 048482          373 EENLNMF-EVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       373 ~~~~~~~-~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                        ..++. ...+++..|+.+++|++++|+.
T Consensus       423 --~~~~~~~~~~~~~~p~~~~~v~~~~R~~  450 (455)
T 2cib_A          423 --PESYRNDHSKMVVQLAQPAAVRYRRRTG  450 (455)
T ss_dssp             --GGGCCEECSSSSCEECSCCEEEEEEC--
T ss_pred             --ccccccccccccccCCCCceEEEEECcc
Confidence              11221 1235566677799999999975


No 19 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=3.2e-57  Score=434.09  Aligned_cols=364  Identities=18%  Similarity=0.262  Sum_probs=258.8

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCC-ccceeeccc-cceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTT-PANILLYEC-QGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS   81 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~-~~~~~~~~~-~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~   81 (403)
                      ++++||+++++||.++  .|..++... ....+  .| .+ ++..+|+.|+++|+++ ++.|+.+.++.+.+.++++++.
T Consensus        68 ~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~--~g~~~-l~~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~  141 (467)
T 3dbg_A           68 YAVTNPELTGALALNP--DYHIAGPLWESLEGL--LGKEG-VATANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHA  141 (467)
T ss_dssp             EEECSHHHHHHHHHCT--TC---------------------------------CGGG-HHHHSTTTSTTTHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHhCc--CcccccchHHHHHHh--cCCCC-cccCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHH
Confidence            5799999999999865  664333222 22222  13 44 4455699999999998 8999999999999999999999


Q ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhhc----cCCc--hh-hHHHHHHHHHHHhcccccchhhhh--hhhhhhhhchHH
Q 048482           82 LITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ--SN-KFGELLRRLEEQFAAFCVGDTFLF--LGCLDVLSGLIG  152 (403)
Q Consensus        82 li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~  152 (403)
                      +++.|.     .++.+|+.+.+..+++++    .|+.  .. ........+...+........+|+  +.+++  ....+
T Consensus       142 l~~~l~-----~~~~~d~~~~~~~~~~~vi~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~  214 (467)
T 3dbg_A          142 LTERWQ-----PGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLP--LPANR  214 (467)
T ss_dssp             HHHHSC-----TTSCEEHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC-----------------------
T ss_pred             HHHHhc-----cCCcCcHHHHHHHHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCC--ChHhH
Confidence            999985     466899999999999998    2321  11 122222222222222222233342  12211  23345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHH
Q 048482          153 RLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATT  232 (403)
Q Consensus       153 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~  232 (403)
                      +..++.+.+.+++.++|++++++.     ..     ..|+++.|++...+++  ..++++++++++..+++||+|||+.+
T Consensus       215 ~~~~~~~~~~~~~~~~i~~r~~~~-----~~-----~~dll~~ll~~~~~~~--~~ls~~ei~~~~~~l~~AG~eTTa~~  282 (467)
T 3dbg_A          215 RFNDALADLHLLVDEIIAERRASG-----QK-----PDDLLTALLEAKDDNG--DPIGEQEIHDQVVAILTPGSETIAST  282 (467)
T ss_dssp             ---CCHHHHHHHHHHHHHHHTTCC-----SS-----CCSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC-----CC-----chHHHHHHHhhccCCC--CCCCHHHHHHHHHHHHHHhHHHHHHH
Confidence            666777889999999999887653     22     6799999998755432  36999999999999999999999999


Q ss_pred             HHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------EeecccccCCCcE
Q 048482          233 LEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRDYNILAKTR  292 (403)
Q Consensus       233 l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g~~ip~Gt~  292 (403)
                      ++|++++|++||++|++|++|++.+.+. ..++++++.+||||+|||                    ++++|+.|||||.
T Consensus       283 l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~  361 (467)
T 3dbg_A          283 IMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGAD  361 (467)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSCEEETTEEECTTCE
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHHhhCHHHHHHHHHHhhcCCCccccceeeCCCccCCCEEECCCCE
Confidence            9999999999999999999999999886 568999999999999999                    7889999999999


Q ss_pred             EEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCCCc
Q 048482          293 VIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKV  372 (403)
Q Consensus       293 v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  372 (403)
                      |+++.+++||||++|+||++|+||||++.+.. ...+..|+|||+|+|.|+|++||++|++++|+.|+++|++++.++..
T Consensus       362 V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  440 (467)
T 3dbg_A          362 IIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN  440 (467)
T ss_dssp             EEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT-TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE
T ss_pred             EEEChHHhcCCchhcCCccccCCccCCCCccc-cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC
Confidence            99999999999999999999999999976432 33567899999999999999999999999999999999999876532


Q ss_pred             cCCccccccCCcccccCCCceeeeccCC
Q 048482          373 EENLNMFEVNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~v~~~~r~  400 (403)
                           .....++++.|+ ++.++...|-
T Consensus       441 -----~~~~~~~~~~p~-~l~~~~~~~~  462 (467)
T 3dbg_A          441 -----DAVRVGITLRPH-DLLVRPVARH  462 (467)
T ss_dssp             -----EEEEESSSEEEE-ECEEEEEECC
T ss_pred             -----CccceeeEecCC-CCccchhhhh
Confidence                 334457777777 7777776653


No 20 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=4.7e-56  Score=426.06  Aligned_cols=368  Identities=18%  Similarity=0.261  Sum_probs=281.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCcccee-eccccceecC-CCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANIL-LYECQGIGFS-NYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~-~~~~~~~~~~-~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~   80 (403)
                      .++++||+++++||.+  ..|.+ +.......+ ...+.+++++ .+|+.|+++||++ .+.|++..++.+.+.+.++++
T Consensus        49 ~v~v~~~~~~~~il~~--~~f~~-~~~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~  124 (470)
T 2ij2_A           49 TRYLSSQRLIKEACDE--SRFDK-NLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAV  124 (470)
T ss_dssp             EEEECCHHHHHHHTCT--TTEEE-CCCHHHHHHHHHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhh--cCcCc-CchhHHHHHHHhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHH
Confidence            3689999999999953  34643 222111111 1124555555 4799999999998 899999999999999999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCC----c-----hhhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           81 SLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG----Q-----SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      .+++.|...  ..++.+|+.+++..+++++    .|+    .     ...+...+...........  ...|++.++.  
T Consensus       125 ~l~~~l~~~--~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--  198 (470)
T 2ij2_A          125 QLVQKWERL--NADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL--QRANPDDPAY--  198 (470)
T ss_dssp             HHHHHHHTC--CTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC-----CTTSGGG--
T ss_pred             HHHHHHHhh--CCCCeEEHHHHHHHHHHHHHHHHHcCCcccccccCCCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc--
Confidence            999999753  2456899999999999998    222    1     1234444433332221111  1112332221  


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ....++..++.+.+.+++.++|+++++...     .     ..|+++.|++....+ ++..+++++|++++..+++||+|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-----~-----~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~~~~AG~d  267 (470)
T 2ij2_A          199 DENKRQFQEDIKVMNDLVDKIIADRKASGE-----Q-----SDDLLTHMLNGKDPE-TGEPLDDENIRYQIITFLIAGHE  267 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----C-----CSSHHHHHHHCCCTT-TCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhccc-----C-----chhHHHHHHhccCcc-cCCCCCHHHHHHHHHHHHHHhhH
Confidence            233455667778899999999998887531     2     579999999865321 12369999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE--------------------Eeecc-cc
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS--------------------VRWRD-YN  286 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i--------------------~~~~g-~~  286 (403)
                      ||+++++|++++|++||++|+||++|++++.+.+ .++++++.+||||+|||                    ++++| |.
T Consensus       268 Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~  346 (470)
T 2ij2_A          268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP  346 (470)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSS-SCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEE
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCCcccCCceE
Confidence            9999999999999999999999999999998864 58999999999999999                    67888 99


Q ss_pred             cCCCcEEEEehhhhhcCCCCC-CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhccee
Q 048482          287 ILAKTRVIVNAWAIQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDW  365 (403)
Q Consensus       287 ip~Gt~v~~~~~~~~rd~~~~-~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~  365 (403)
                      |||||.|+++.+++||||++| +||++|+|||| +.  .....+..|+|||+|+|.|+|++||++|++++|+.|+++|+|
T Consensus       347 Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~--~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~  423 (470)
T 2ij2_A          347 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN--PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF  423 (470)
T ss_dssp             ECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS--GGGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred             eCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC--CCcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeE
Confidence            999999999999999999999 99999999999 32  112234679999999999999999999999999999999999


Q ss_pred             ecCCCCccCCccccccCCcccccCCCceeeeccCCC
Q 048482          366 NLPLGKVEENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      + ..+.    .++....+++..|+ +++|++++|+.
T Consensus       424 ~-~~~~----~~~~~~~~~~~~p~-~~~v~~~~R~~  453 (470)
T 2ij2_A          424 E-DHTN----YELDIKETLTLKPE-GFVVKAKSKKI  453 (470)
T ss_dssp             E-CTTC----CCCCEEESSSEEET-TCEEEEEECCC
T ss_pred             e-eCCC----CccccccceEecCC-CeEEEEEEccC
Confidence            8 3221    12333346677777 99999999864


No 21 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=2.1e-56  Score=426.60  Aligned_cols=365  Identities=17%  Similarity=0.245  Sum_probs=289.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      -+|++||+++++|+.+++..|++++.......+  .|.++++..+|+.|+.+||++ .+.|+.+.++.+.+.+.++++.+
T Consensus        50 ~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l  126 (450)
T 3gw9_A           50 VTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPV--FGEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKF  126 (450)
T ss_dssp             EEEECCGGGTHHHHSSCTTTEESTGGGGGGHHH--HCTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHH
T ss_pred             EEEEeCHHHHHHHHhCChhhccchhhHHHHHHH--hcCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHH
Confidence            368899999999999888888877654333222  256677766799999999998 89999999999999999999999


Q ss_pred             HH-HHHHhccCCCCceeHHHHHHHHHhhc----cCCc-------hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhch
Q 048482           83 IT-KIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ-------SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGL  150 (403)
Q Consensus        83 i~-~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  150 (403)
                      ++ .|..    .++.+|+.+++..+++++    .|+.       ...+.+.+..+....  ......+|++.+++  ...
T Consensus       127 l~~~~~~----~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp--~~~  198 (450)
T 3gw9_A          127 MAANWDK----DEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL--IPAAVFLPILLKLP--LPQ  198 (450)
T ss_dssp             HHHHSCS----SEEEEEHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHTC--CGGGGTCGGGGGSC--CHH
T ss_pred             HHHHhcc----CCCcccHHHHHHHHHHHHHHHHHcCcchhhhhhhHHHHHHHHHHHhcc--ccchhcccchhccC--Cch
Confidence            99 6542    345799999999999998    3332       122333333332211  22344566665542  234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchH
Q 048482          151 IGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTA  230 (403)
Q Consensus       151 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~  230 (403)
                      .++..++.+.+.+++.++|+++++.... ....     ..|+++.|++...+++  ..++++++++++..+++||+|||+
T Consensus       199 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~-----~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~~~~AG~dTta  270 (450)
T 3gw9_A          199 SARCHEARTELQKILSEIIIARKEEEVN-KDSS-----TSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSS  270 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSCC-----CCSHHHHHHHCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCc-----cchHHHHHHHhhccCC--CCCCHHHHHHHHHHHHHHhhhHhH
Confidence            5567788889999999999988864311 1122     6799999998764432  369999999999999999999999


Q ss_pred             HHHHHHHHHHh--hChhhHHHHHHHHHHHhcCCCcCChhhc-cCCCcceEEE--------------------Eeeccccc
Q 048482          231 TTLEWAMAELV--KNPTSMKRAREEVRSVAKGKLNIDMKDI-EKMDYLKCVS--------------------VRWRDYNI  287 (403)
Q Consensus       231 ~~l~~~l~~L~--~~p~~q~~l~~Ei~~~~~~~~~~~~~~~-~~lp~l~a~i--------------------~~~~g~~i  287 (403)
                      .+++|++++|+  .||++|+++++|++++   ...++++++ .+||||+|||                    ++++||.|
T Consensus       271 ~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~i  347 (450)
T 3gw9_A          271 ITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVV  347 (450)
T ss_dssp             HHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEE
T ss_pred             HHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCChHHHHHhcHHHHHHHHHHHHhCCchhccccccccccccCCEEE
Confidence            99999999999  9999999999999887   345788999 9999999999                    78899999


Q ss_pred             CCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeec
Q 048482          288 LAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNL  367 (403)
Q Consensus       288 p~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~  367 (403)
                      ||||.|+++.+++||||++|+||++|+|||+.       ..+..|+|||+|+|.|+|++||.+|++++|+.|+++|+|++
T Consensus       348 p~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~-------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  420 (450)
T 3gw9_A          348 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDE-------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL  420 (450)
T ss_dssp             CTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC-------SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred             CCCCEEEEChHHhhCChhhcCCccccCCCcCc-------CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEe
Confidence            99999999999999999999999999999932       12567999999999999999999999999999999999998


Q ss_pred             CCCCccCCccccccCCcccccC-CCceeeeccCC
Q 048482          368 PLGKVEENLNMFEVNGLVVHKK-LPLHPVPTLYS  400 (403)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~r~  400 (403)
                      .++..+   +.. ..+++..|+ .+++|++++|+
T Consensus       421 ~~~~~~---~~~-~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          421 LRDEVP---DPD-YHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             SSSSCC---CEE-TTSSSCEECGGGCEEEEEECC
T ss_pred             cCCCCC---CCc-cccceecCCCCceEeEeeecC
Confidence            755321   122 234566677 79999999985


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=9.3e-55  Score=416.47  Aligned_cols=365  Identities=17%  Similarity=0.263  Sum_probs=283.1

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      -+|+++|++++++|.++...|..++..... .....|.++++..+|+.|+.+||++ .+.|+...++.+.+.+++++..+
T Consensus        57 ~vvv~~~~~~~~il~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~l  134 (461)
T 3i3k_A           57 FTYLLGSDAAALLFNSKNEDLNAEDVYSRL-TTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEY  134 (461)
T ss_dssp             EEEECSHHHHHHHHHCCTTTEESHHHHHHH-HHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeChHHHHHHHhccccccccchHHHHh-hhhhcCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHH
Confidence            367999999999998776666543321111 0111256777776799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHHHHHHhhc----cCCc------hhhHHHHHHHHHHHhcccc-cchhhhhhhhhhhhhchH
Q 048482           83 ITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQ------SNKFGELLRRLEEQFAAFC-VGDTFLFLGCLDVLSGLI  151 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~  151 (403)
                      ++.|..     +..+|+.+.+..+++++    .|+.      .+.+.+....+   ...+. ....+|  .|++  ....
T Consensus       135 l~~l~~-----~~~~dl~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P--~~l~--~~~~  202 (461)
T 3i3k_A          135 FESWGE-----SGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADL---DGGFSHAAWLLP--GWLP--LPSF  202 (461)
T ss_dssp             GGGGCS-----EEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHH---HTTSSHHHHHSC--TTSC--CHHH
T ss_pred             HHHhhh-----cCCcCHHHHHHHHHHHHHHHHHccHhhhhHHHHHHHHHHHHH---Hhccccchhhcc--cccC--CHHH
Confidence            998853     34589999999988888    2332      11222222222   11111 111222  1221  1245


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHH
Q 048482          152 GRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTAT  231 (403)
Q Consensus       152 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~  231 (403)
                      ++..++.+.+.+++.+.|+++++...     .     ..|+++.|++...+++  ..+++++++..+..+++||+|||+.
T Consensus       203 ~~~~~~~~~~~~~~~~~i~~~~~~~~-----~-----~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~l~~ag~~Tt~~  270 (461)
T 3i3k_A          203 RRRDRAHREIKDIFYKAIQKRRQSQE-----K-----IDDILQTLLDATYKDG--RPLTDDEVAGMLIGLLLAGQHTSST  270 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCC-----C-----CCSHHHHHHTCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccc-----c-----cccHHHHHHHhhhccC--CCCCHHHHHHHHHHHHhhccHHHHH
Confidence            66777888999999999999876532     2     6799999998764432  3699999999999999999999999


Q ss_pred             HHHHHHHHHhhChhhHHHHHHHHHHHhcCC-CcCChhhccCCCcceEEE--------------------EeecccccCCC
Q 048482          232 TLEWAMAELVKNPTSMKRAREEVRSVAKGK-LNIDMKDIEKMDYLKCVS--------------------VRWRDYNILAK  290 (403)
Q Consensus       232 ~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i--------------------~~~~g~~ip~G  290 (403)
                      +++|++++|++||++|+|+++|++++++.. ..++++++.++|||+|||                    ++++||.||||
T Consensus       271 ~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G  350 (461)
T 3i3k_A          271 TSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPG  350 (461)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTT
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHHhcChHHHHHHHHHHhcCCCccccccccCCCccCCCEEECCC
Confidence            999999999999999999999999999865 345899999999999999                    78899999999


Q ss_pred             cEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCC
Q 048482          291 TRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLG  370 (403)
Q Consensus       291 t~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  370 (403)
                      |.|+++.+++||||++|+||++|+||||++.+.. ...+..|+|||+|+|.|+|++||.+|++++|+.|+++|+|++.++
T Consensus       351 ~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~  429 (461)
T 3i3k_A          351 HQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDG  429 (461)
T ss_dssp             CEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHH-HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTT
T ss_pred             CEEEEChHHhcCCcccCCCcccCCCCCCCCCCCC-CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCC
Confidence            9999999999999999999999999999976421 224568999999999999999999999999999999999998766


Q ss_pred             CccCCccccccCCcccccCCCceeeecc
Q 048482          371 KVEENLNMFEVNGLVVHKKLPLHPVPTL  398 (403)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~  398 (403)
                      ..+   ... ...++..|..++.++-.+
T Consensus       430 ~~~---~~~-~~~~~~~p~~~~~~~~~~  453 (461)
T 3i3k_A          430 YFP---TVN-YTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             CCC---CBC-CSSSSCCBSSCEEEEEEC
T ss_pred             CCC---Ccc-cceeecCCCCceEEeecc
Confidence            321   122 345567788888776554


No 23 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.9e-52  Score=396.90  Aligned_cols=350  Identities=16%  Similarity=0.181  Sum_probs=247.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .+++++|+.+++||.++. .|++++.........  +.+.++..+|+.|+++||++ .+.|+++.++.+.+.+++.++++
T Consensus        76 ~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~--~~~~l~~~dg~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l  151 (441)
T 3nc3_A           76 SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM--RGPVLAQMHGKEHSAKRRIV-VRSFIGDALDHLSPLIKQNAENL  151 (441)
T ss_dssp             EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC--C-------------CCHHHH-HHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHhcCcc-ccccccccccccccc--CCCccccCCcHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHH
Confidence            378999999999998654 488776544333222  34445566799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeH-HHHHHHHHhhc---cCC----chhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           83 ITKIRLSCFNKGSPLNL-LEMLLIASKEE---NTG----QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~-~~~~~~~~~~v---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++.|.     .++.+|+ .+....+++++   .|+    ..+.+......+...+......            .....+.
T Consensus       152 l~~l~-----~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~  214 (441)
T 3nc3_A          152 LAPYL-----ERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADFITSISQS------------PEARAHS  214 (441)
T ss_dssp             HTTTT-----TTTEEECCCCCHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHCSCCC------------HHHHHHH
T ss_pred             HHHHH-----hcCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCC------------hHHHHHH
Confidence            99986     3446775 34444566666   233    2233444444443332211100            1223456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++.+.+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+.+++
T Consensus       215 ~~~~~~l~~~~~~~i~~rr~~~------------~~Dll~~Ll~~~~~~---~~ls~~el~~~~~~ll~AG~eTTa~~l~  279 (441)
T 3nc3_A          215 LWCSEQLSQYLMPVIKERRVNP------------GSDLISILCTSEYEG---MALSDKDILALILNVLLAATEPADKTLA  279 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSC------------CSSHHHHHCC---------CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            6778889999999999987642            569999999876543   3799999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWD  308 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~  308 (403)
                      |++++|++||++|++|++|+..   ++.+    +..-..-.+.+..+.   ++++|+.|||||.|+++.+++||||++|+
T Consensus       280 ~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~LRl~pp~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~  355 (441)
T 3nc3_A          280 LMIYHLLNNPEQMNDVLADRSLVPRAIAE----TLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFE  355 (441)
T ss_dssp             HHHHHHHTSHHHHHHHHHCGGGHHHHHHH----HHHHSCSBCEEEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSS
T ss_pred             HHHHHHHhCHHHHHHHHhCHHHHHHHHHH----hhhcCCcccCccEEECCCEEECCEEECCCCEEEechHHhcCChhhCC
Confidence            9999999999999999999632   1111    111111122222222   78999999999999999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCcccc
Q 048482          309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVVH  387 (403)
Q Consensus       309 dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~  387 (403)
                      ||++|+||||+.........+..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.      .....+.++.
T Consensus       356 dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~------~~~~~~~~~~  429 (441)
T 3nc3_A          356 QPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF------CYAESGLYTR  429 (441)
T ss_dssp             STTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC------CCCEECSSBC
T ss_pred             CcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC------cccccCcccc
Confidence            9999999999765433333367899999999999999999999999999999999 99987652      1222345566


Q ss_pred             cCCCceeeecc
Q 048482          388 KKLPLHPVPTL  398 (403)
Q Consensus       388 ~~~~~~v~~~~  398 (403)
                      ....++|++.|
T Consensus       430 ~~~~lpv~~~~  440 (441)
T 3nc3_A          430 GPVSLLVAFDG  440 (441)
T ss_dssp             EESCCEEECC-
T ss_pred             CcceeEEEEec
Confidence            66678887764


No 24 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1.8e-52  Score=403.82  Aligned_cols=371  Identities=13%  Similarity=0.166  Sum_probs=256.7

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCC-ccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTT-PANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      +|++||+++++|+.++.. +..++... .....  .|.+.+...+|+.|+.+|+.+ .+.|+.+.++.+.+.+.+.+..+
T Consensus        60 vvv~dp~~~~~il~~~~~-~~~~~~~~~~~~~~--~g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~  135 (491)
T 3dax_A           60 HFITNPLSYHKVLCHGKY-FDWKKFHFATSAKA--FGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRI  135 (491)
T ss_dssp             EEECCGGGTHHHHSCCTT-EESSHHHHHHHHHH--HTCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcChHHHHHHHcCCcc-CChHHHHHHHHHHH--cCCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHH
Confidence            578999999999975431 22222111 11111  134444234589999999998 78999999999988888888877


Q ss_pred             HHHHHHhc--cCCCCceeHHHHHHHHHhhcc----CC----chhhHHHHHHHHHHHhcccccchhhhhhhh-hhhhhchH
Q 048482           83 ITKIRLSC--FNKGSPLNLLEMLLIASKEEN----TG----QSNKFGELLRRLEEQFAAFCVGDTFLFLGC-LDVLSGLI  151 (403)
Q Consensus        83 i~~l~~~~--~~~~~~vd~~~~~~~~~~~v~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~  151 (403)
                      ++.+....  ......+++...+..+++++.    |+    ..++.......+...+..  +...+|++.+ ++  ....
T Consensus       136 l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~lp--~~~~  211 (491)
T 3dax_A          136 MRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQ--FDKVFPALVAGLP--IHMF  211 (491)
T ss_dssp             HC----------CCEEEEHHHHHHHHHHHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHH--HHHHHHHHHTTCC--GGGS
T ss_pred             HHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHHcCcccccccchhhhhhHHHHHHHH--HHHHhHHHHHhCC--Hhhh
Confidence            76654320  012346788888888888872    32    222222233333322211  2334553322 21  1222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHH
Q 048482          152 GRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTAT  231 (403)
Q Consensus       152 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~  231 (403)
                      ++..+..+.+.+.+   ++++.+..     ..     ..|+++.+++...+.+   .++++++++.++.+++||+|||+.
T Consensus       212 ~~~~~~~~~~~~~~---~~~~~~~~-----~~-----~~d~l~~ll~~~~~~~---~~~~~~i~~~~~~~~~ag~~tta~  275 (491)
T 3dax_A          212 RTAHNAREKLAESL---RHENLQKR-----ES-----ISELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQANTIP  275 (491)
T ss_dssp             HHHHHHHHHHHHHT---SHHHHTTC-----BS-----CCHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             hHHHHHHHHHHHHH---HHHHhhcc-----cc-----hhHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHhccchHH
Confidence            33444444433332   23333221     12     6799999987654432   588999999999999999999999


Q ss_pred             HHHHHHHHHhhChhhHHHHHHHHHHHhcCCC----------cCChhhccCCCcceEEE-------------------Eee
Q 048482          232 TLEWAMAELVKNPTSMKRAREEVRSVAKGKL----------NIDMKDIEKMDYLKCVS-------------------VRW  282 (403)
Q Consensus       232 ~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~----------~~~~~~~~~lp~l~a~i-------------------~~~  282 (403)
                      +++|++++|++||++|+||++||+++++...          .++++++.+||||+|||                   +++
T Consensus       276 tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~R~~~~d~~l  355 (491)
T 3dax_A          276 ATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTL  355 (491)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEEECEEEEESSSEEE
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCCccceeEecCCeEe
Confidence            9999999999999999999999999987532          35899999999999999                   566


Q ss_pred             ----cccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCC--------CCCCccccccCCCCCCCCChHHHHH
Q 048482          283 ----RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDC--------KSQDFEFISFGAGRRGYLGTSFALV  350 (403)
Q Consensus       283 ----~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~--------~~~~~~~~~FG~G~r~C~G~~~A~~  350 (403)
                          +||.|||||.|+++.+++||||++|+||++|+||||++++...        ...+..|+|||+|+|.|+|++||++
T Consensus       356 ~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~  435 (491)
T 3dax_A          356 HLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIH  435 (491)
T ss_dssp             EETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHH
T ss_pred             ecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHH
Confidence                6899999999999999999999999999999999999654221        1245689999999999999999999


Q ss_pred             HHHHHHHHHHhcceeecCCCCccCCccccc-cCCc-ccccCCCceeeeccC
Q 048482          351 EVEYVIANLLYWFDWNLPLGKVEENLNMFE-VNGL-VVHKKLPLHPVPTLY  399 (403)
Q Consensus       351 ~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~v~~~~r  399 (403)
                      |++++|+.||++|+|++.++.. ...++.. ..++ +.+|+.+++++++..
T Consensus       436 e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~r~~  485 (491)
T 3dax_A          436 EIKQFLILMLSYFELELIEGQA-KCPPLDQSRAGLGILPPLNDIEFKYKFK  485 (491)
T ss_dssp             HHHHHHHHHHHHEEEEETTTTC-CCCCBCGGGTBEEECCBSSCCEEEEEEC
T ss_pred             HHHHHHHHHHHHeeEEEccCCC-CCCCCCcccccccccCCCCCceEEEEec
Confidence            9999999999999999876532 1122222 1343 467777888777654


No 25 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=3.7e-51  Score=389.22  Aligned_cols=331  Identities=14%  Similarity=0.103  Sum_probs=244.4

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeec-------------cccceecCCCchhhHHHHhHHHHhhchHHHhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLY-------------ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQ   69 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~-------------~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~   69 (403)
                      .+|+++++.+++||++. ..|++++..........             .+. .++..+|+.|+++||++ ++.|+++.++
T Consensus        73 ~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~-~l~~~dg~~h~~~R~~~-~~~fs~~~l~  149 (450)
T 3tkt_A           73 FWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVE-SLVQMDAPKHPKLRRLT-QDWFMPKNLA  149 (450)
T ss_dssp             EEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSC-CGGGCCTTHHHHHHHHH-HTTTSHHHHG
T ss_pred             EEEEecHHHHHHHHhCc-ccccCCCcccccccccccccccccccccccccc-CcccCCCHHHHHHHHHh-hhhhCHHHHH
Confidence            48999999999999754 78988875443222110             112 34555699999999998 8999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhh
Q 048482           70 SFQHVRDGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLD  145 (403)
Q Consensus        70 ~~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  145 (403)
                      .+.+.++++++++++.|.+    .++.+|+...+ ..+++++   .|+.+.+-...+......+.........++..++.
T Consensus       150 ~~~~~i~~~~~~ll~~l~~----~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (450)
T 3tkt_A          150 RLDGEIRKIANEAIDRMLG----AGEEGDFMALVAAPYPLHVVMQILGVPPEDEPKMLFLTQQMFGGQDEDMNKSGLKDL  225 (450)
T ss_dssp             GGHHHHHHHHHHHHHHHHH----TCSEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHHHHHHHTTSCCC------------
T ss_pred             HHHHHHHHHHHHHHHHHHh----cCCCEeeHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHhccccchhhccccccc
Confidence            9999999999999999985    36789987777 6888888   34322211122222222221111122223332222


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 048482          146 VLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAG  225 (403)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag  225 (403)
                      .+....++..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG  290 (450)
T 3tkt_A          226 PPEQISQIVAGAVAEFERYFAGLAAERRRNP------------TDDVATVIANAVVDG---EPMSDRDTAGYYIITASAG  290 (450)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTCEETT---EECCHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhccccC---CCCCHHHHHHHHHHHHHHH
Confidence            1234456778888899999999999988753            568999999876543   3699999999999999999


Q ss_pred             ccchHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhh
Q 048482          226 TDTTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWA  299 (403)
Q Consensus       226 ~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~  299 (403)
                      +|||+++++|++++|++||++|+||++|++.   ++.+    +..-..-.+.+.-+.   ++++|+.||||+.|+++.++
T Consensus       291 ~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~  366 (450)
T 3tkt_A          291 HDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEE----AIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVA  366 (450)
T ss_dssp             SHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHHCSBCEEEEEESSSEEETTEEECTTCEEEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHHCHHHHHHHHHH----HHHhCCCccCcceeeCCCeeECCEEECCCCEEEEChHH
Confidence            9999999999999999999999999999742   2211    111111122221112   88999999999999999999


Q ss_pred             hhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCC
Q 048482          300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPL  369 (403)
Q Consensus       300 ~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~  369 (403)
                      +||||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++|+ +++.+
T Consensus       367 ~~rDp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  427 (450)
T 3tkt_A          367 ANHDPAQFPEPRKFDPTRPA----------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG  427 (450)
T ss_dssp             HHTCTTTSSSTTSCCTTSCT----------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS
T ss_pred             hcCChhhCCCcCeeCCCCCC----------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence            99999999999999999952          35899999999999999999999999999999998 77653


No 26 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.2e-51  Score=387.03  Aligned_cols=337  Identities=14%  Similarity=0.091  Sum_probs=254.1

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+.+++||. +...|++++......... .+...++..+|+.|+++||++ .+.|+++.++.+.+.+.++++.+
T Consensus        46 ~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l  122 (398)
T 4fb2_A           46 HWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETG-EFELMMAGQDDPVHKKYRQLV-AKPFSPEATDLFTEQLRQSTNDL  122 (398)
T ss_dssp             EEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHHHHHHHHH-HTTTCHHHHHTTHHHHHHHHHHH
T ss_pred             EEEEccHHHHHHHHh-ChhhccCCcccccCCCCc-ccccCcccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHH
Confidence            478999999999994 566888877654322222 223345666799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHH-HHHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEM-LLIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++.|..     ++.+|+... ...+++++   .|+..    +.+.+....+..                    +....+.
T Consensus       123 ~~~l~~-----~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~--------------------~~~~~~~  177 (398)
T 4fb2_A          123 IDARIE-----LGEGDAATWLANEIPARLTAILLGLPPEDGDTYRRWVWAITH--------------------VENPEEG  177 (398)
T ss_dssp             HHTTTT-----TTEEEHCCCCCTTHHHHHHHHHTTSCGGGHHHHHHHHHHHHH--------------------CCCHHHH
T ss_pred             HHHHhh-----cCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhc--------------------CCCHHHH
Confidence            999863     335776433 34566665   23322    122222222111                    0122356


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++.+.+.+++.+.|++++++.            .+|+++.|++...++   ..++++++++.+..+++||+|||+.+++
T Consensus       178 ~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~l~~AG~~Tt~~~l~  242 (398)
T 4fb2_A          178 AEIFAELVAHARTLIAERRTNP------------GNDIMSRVIMSKIDG---ESLSEDDLIGFFTILLLGGIDNTARFLS  242 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHCCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHcccCC---CCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            7788889999999999998752            679999999876543   2699999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHHH---hcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRSV---AKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWD  308 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~~---~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~  308 (403)
                      |++++|++||++|+||++|++.+   +.+    +..-..-.| +..+.   ++++|+.|||||.|+++.+++||||++|+
T Consensus       243 ~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~  317 (398)
T 4fb2_A          243 SVFWRLAWDIELRRRLIAHPELIPNAVDE----LLRFYGPAM-VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFD  317 (398)
T ss_dssp             HHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHHCCBC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSS
T ss_pred             HHHHHHHhCHHHHHHHHhCHHHHHHHHHH----HHHhCCCcC-CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCC
Confidence            99999999999999999997532   211    111112223 22222   78999999999999999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCcccc
Q 048482          309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVVH  387 (403)
Q Consensus       309 dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~  387 (403)
                      ||++|+||||.          ..++|||+|+|.|+|++||.+|++++|+.|+++| ++++.++..     .....+.+..
T Consensus       318 dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-----~~~~~~~~~~  382 (398)
T 4fb2_A          318 SPDNIVIERTP----------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKE-----CEWLMGQVAG  382 (398)
T ss_dssp             STTSCCTTCCS----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTSC-----CEEECSSBCE
T ss_pred             CcCeeCCCCCC----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCCC-----ceeccccccc
Confidence            99999999982          3689999999999999999999999999999999 999876532     1222233333


Q ss_pred             cCCCceeeeccCCCCC
Q 048482          388 KKLPLHPVPTLYSPYP  403 (403)
Q Consensus       388 ~~~~~~v~~~~r~~~~  403 (403)
                      + ..++|++++|.+.|
T Consensus       383 ~-~~lpv~~~~~~~~s  397 (398)
T 4fb2_A          383 M-LHVPIIFPKGKRLS  397 (398)
T ss_dssp             E-EECEEECCCCCCCC
T ss_pred             c-ceeEEEEcCCCCCC
Confidence            3 46899999988765


No 27 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.6e-51  Score=383.75  Aligned_cols=341  Identities=15%  Similarity=0.106  Sum_probs=254.9

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+++++||.++ ..|++++... ....  .+.++++ .+|+.|+++||++ .+.|+++.++.+.+.+++.++++
T Consensus        40 ~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l  113 (398)
T 2xkr_A           40 LAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMID-MDDPAHLLRRKLV-NAGFTRKRVKDKEASIAALCDTL  113 (398)
T ss_dssp             CEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGG-CCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHH
T ss_pred             eEEEecHHHHHHHHhCc-ccccCccccC-Cccc--ccccccc-cCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHH
Confidence            47899999999999754 4788776432 1112  2344444 4699999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHH-HHHHHHHhhc---cCCc----hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLL-EMLLIASKEE---NTGQ----SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~-~~~~~~~~~v---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++.|..     ++.+|+. +.+..+++++   .|+.    .+.+......+....        .|.  ++   +...++.
T Consensus       114 ~~~l~~-----~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~--------~~~--~~---p~~~~~~  175 (398)
T 2xkr_A          114 IDAVCE-----RGECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFL--------SSH--VS---QEDFQIT  175 (398)
T ss_dssp             HHTTTT-----TSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHH--------TSC--CC---HHHHHHH
T ss_pred             HHhhhh-----cCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcc--------Ccc--cc---hhhHHHH
Confidence            999863     2379998 4456788877   2322    223333333332221        111  01   1234566


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+.+++
T Consensus       176 ~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~eTt~~~l~  240 (398)
T 2xkr_A          176 MDAFAAYNDFTRATIAARRADP------------TDDLVSVLVSSEVDG---ERLSDDELVMETLLILIGGDETTRHTLS  240 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            7788889999999999988642            578999999875432   3699999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWD  308 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~  308 (403)
                      |++++|++||++|+||++|++.   ++.+    +..-..-.|.+.-+.   ++++|+.|||||.|+++.+++||||++|+
T Consensus       241 ~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~  316 (398)
T 2xkr_A          241 GGTEQLLRNRDQWDLLQRDPSLLPGAIEE----MLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFC  316 (398)
T ss_dssp             HHHHHHHHSHHHHHHHHHCGGGHHHHHHH----HHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSS
T ss_pred             HHHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHhhcccccCcceEECCCeeECCEEECCCCEEEeChhhhcCChhhCC
Confidence            9999999999999999999752   2211    111111222222222   78999999999999999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCcccc-ccCCccc
Q 048482          309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMF-EVNGLVV  386 (403)
Q Consensus       309 dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~-~~~~~~~  386 (403)
                      ||++|+||||.+          .++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.   .  +. ...+...
T Consensus       317 dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~--~~~~~~~~~~  381 (398)
T 2xkr_A          317 EPEKFDVQRNPN----------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADD---S--VLPLRPANFV  381 (398)
T ss_dssp             STTSCCTTCSSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTT---C--CCCBCCCSSB
T ss_pred             CCCeeCCCCCCC----------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCc---c--eecccCcccc
Confidence            999999999842          389999999999999999999999999999999 59986431   1  21 0223445


Q ss_pred             ccCCCceeeeccCCC
Q 048482          387 HKKLPLHPVPTLYSP  401 (403)
Q Consensus       387 ~~~~~~~v~~~~r~~  401 (403)
                      .....++|+++||.+
T Consensus       382 ~~~~~lpv~~~p~~r  396 (398)
T 2xkr_A          382 SGLESMPVVFTPSPP  396 (398)
T ss_dssp             CCBSCCEEECCCCCC
T ss_pred             cCccceeEEecCCCC
Confidence            555678888887765


No 28 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=1.5e-52  Score=404.26  Aligned_cols=368  Identities=13%  Similarity=0.148  Sum_probs=272.6

Q ss_pred             ccccCCHHHHHHHHHhccc-cccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDI-VISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS   81 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~-~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~   81 (403)
                      .+|++||+++++||.++.. .|..++.......+   |.+.+...+|+.|+++|+.+ .++|+++.++.+.+.+.+++.+
T Consensus        59 ~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~  134 (491)
T 3v8d_A           59 VHFITNPLSYHKVLCHGKYFDWKKFHFALSAKAF---GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQR  134 (491)
T ss_dssp             EEEECCGGGHHHHHSCCTTEESSHHHHHHHHHHH---TCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHhcCCccchHHHHHHHHHHhc---CCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHH
Confidence            3789999999999965431 23322211111222   34444445699999999987 8999999999999999999999


Q ss_pred             HHHHHHHhccC--CCCceeHHHHHHHHHhhc----cCCc-----hhh---HHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           82 LITKIRLSCFN--KGSPLNLLEMLLIASKEE----NTGQ-----SNK---FGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        82 li~~l~~~~~~--~~~~vd~~~~~~~~~~~v----~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +++.+.....+  ....+++.+++..+++++    .|+.     ++.   +.+....+..      +...+|.+.+. ..
T Consensus       135 ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~-~p  207 (491)
T 3v8d_A          135 IMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQ------FDKVFPALVAG-LP  207 (491)
T ss_dssp             HHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHH------HHHHHHHHHTT-CC
T ss_pred             HHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHHHHcCccccccchhhhhhHHHHHHHHH------HHHHHHHHHhc-CC
Confidence            99865332211  345789999999999888    2321     111   2222222221      23334433221 11


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ....++..++.+.+.+++.+.+.++++        .     ..|+++.+++...+.+   .+++++++..++.+++||++
T Consensus       208 ~~~~~~~~~a~~~l~~~~~~~~~~~~~--------~-----~~d~l~~l~~~~~~~~---~~~~~ei~~~~~~~~~ag~~  271 (491)
T 3v8d_A          208 IHMFRTAHNAREKLAESLRHENLQKRE--------S-----ISELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQA  271 (491)
T ss_dssp             GGGCHHHHHHHHHHHHHTSHHHHTTCB--------S-----CCHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccc--------c-----ccHHHHHHHHHhhccC---CCchHHHHHHHHHHHHHhHH
Confidence            344566777777777777666654432        1     5789999998766543   69999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCC----------CcCChhhccCCCcceEEE------------------
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRSVAKGK----------LNIDMKDIEKMDYLKCVS------------------  279 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~----------~~~~~~~~~~lp~l~a~i------------------  279 (403)
                      ||+.+++|++++|++||++|++|++||+++.+..          ..++++++.++|||+|||                  
T Consensus       272 tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~~~~~R~~~~  351 (491)
T 3v8d_A          272 NTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKE  351 (491)
T ss_dssp             THHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEEECEEEEESS
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCCCccceeccC
Confidence            9999999999999999999999999999998643          357889999999999999                  


Q ss_pred             -Eee----cccccCCCcEEEEehhhhhcCCCCCCCCCCCCCccccccccCC--------CCCCccccccCCCCCCCCChH
Q 048482          280 -VRW----RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDC--------KSQDFEFISFGAGRRGYLGTS  346 (403)
Q Consensus       280 -~~~----~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~--------~~~~~~~~~FG~G~r~C~G~~  346 (403)
                       +++    +|+.||||+.|.++.+++||||++|+||++|+||||++.+...        ...+..|+|||+|+|.|+|++
T Consensus       352 d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~  431 (491)
T 3v8d_A          352 DFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRL  431 (491)
T ss_dssp             SEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHH
T ss_pred             CeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHH
Confidence             677    8999999999999999999999999999999999999764321        124578999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcceeecCCCCc-cCCccccccCCcccccCCCceeeec
Q 048482          347 FALVEVEYVIANLLYWFDWNLPLGKV-EENLNMFEVNGLVVHKKLPLHPVPT  397 (403)
Q Consensus       347 ~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~  397 (403)
                      ||.+|++++|+.|+++|+|++.++.. .+..+.......+++|+.++.|+++
T Consensus       432 lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~  483 (491)
T 3v8d_A          432 FAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYK  483 (491)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeEEEEE
Confidence            99999999999999999999876632 2222322222335678888888775


No 29 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=5.1e-51  Score=383.68  Aligned_cols=345  Identities=16%  Similarity=0.165  Sum_probs=252.1

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccc----eeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPAN----ILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGE   78 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~----~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~   78 (403)
                      .++++||+.+++||.++ ..|++++......    .....+.++ +..+|+.|+++||++ ++.|+++.++.+.+.++++
T Consensus        38 ~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~  114 (404)
T 3ejb_B           38 GWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMM-LFQNQPDHRRLRTLA-SGAFTPRTTESYQPYIIET  114 (404)
T ss_dssp             EEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSG-GGCCTTHHHHHHHHH-HGGGSHHHHHTTHHHHHHH
T ss_pred             EEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcch-hhcCCchHHHHHHHH-HhhcCHHHHHHHHHHHHHH
Confidence            47899999999999866 6788776432211    111123454 445699999999998 8999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCceeHHHH-HHHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhch
Q 048482           79 VSSLITKIRLSCFNKGSPLNLLEM-LLIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGL  150 (403)
Q Consensus        79 ~~~li~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  150 (403)
                      ++.+++.|.     +++.+|+... ...+++++   .|+.+    +.+.+....+...+.       .|+.      ...
T Consensus       115 ~~~ll~~l~-----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~-------~p~~------~~~  176 (404)
T 3ejb_B          115 VHHLLDQVQ-----GKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTID-------FTRS------RKA  176 (404)
T ss_dssp             HHHHHHTTT-----TTSEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHGGGS-------TTCC------HHH
T ss_pred             HHHHHHHhh-----hcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcc-------CCCC------HHH
Confidence            999999986     3457887554 44577777   23322    223222222221111       1211      123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchH
Q 048482          151 IGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTA  230 (403)
Q Consensus       151 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~  230 (403)
                      .++..++...+.+++.+.|+++++..            .+|+++.|+ ...++   ..++++++++++..+++||+|||+
T Consensus       177 ~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll-~~~~~---~~ls~~el~~~~~~l~~AG~dTta  240 (404)
T 3ejb_B          177 LTEGNIMAVQAMAYFKELIQKRKRHP------------QQDMISMLL-KGREK---DKLTEEEAASTCILLAIAGHETTV  240 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHH-HC-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC------------cchHHHHHH-hcccC---CCCCHHHHHHHHHHHHHcchHHHH
Confidence            45677888899999999999988642            678999999 43332   379999999999999999999999


Q ss_pred             HHHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          231 TTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       231 ~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      ++++|++++|++||++|+||++|++.+-.- -..+..-..-.|.+..+.   ++++|+.|||||.|.++.+++||||++|
T Consensus       241 ~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~-i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~  319 (404)
T 3ejb_B          241 NLISNSVLCLLQHPEQLLKLRENPDLIGTA-VEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIF  319 (404)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHCGGGHHHH-HHHHHHHSCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS
T ss_pred             HHHHHHHHHHHHCHHHHHHHHhCHHHHHHH-HHHHHHhCCcccccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhC
Confidence            999999999999999999999997532110 000111111222222222   7899999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCccc
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVV  386 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~  386 (403)
                      +||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.      .....+.++
T Consensus       320 ~dp~~F~p~R~~----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~------~~~~~~~~~  383 (404)
T 3ejb_B          320 TNPDVFDITRSP----------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFE------WRYRPLFGF  383 (404)
T ss_dssp             SSTTSCCTTCSS----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--C------CCBCSCSSB
T ss_pred             CCcceeCCCCCC----------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCCC------ceeccCccc
Confidence            999999999982          3589999999999999999999999999999999 99987432      223345666


Q ss_pred             ccCCCceeeeccCCC
Q 048482          387 HKKLPLHPVPTLYSP  401 (403)
Q Consensus       387 ~~~~~~~v~~~~r~~  401 (403)
                      .....++|+++||..
T Consensus       384 ~~~~~lpv~~~~~~~  398 (404)
T 3ejb_B          384 RALEELPVTFEASWS  398 (404)
T ss_dssp             CCBSCCEEECC----
T ss_pred             CCcceeEEEEecccc
Confidence            777789999998865


No 30 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=5.5e-51  Score=386.02  Aligned_cols=352  Identities=15%  Similarity=0.137  Sum_probs=249.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCC-CCcc---c---e---ee---ccccceecCCCchhhHHHHhHHHHhhchHHHhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPK-TTPA---N---I---LL---YECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQ   69 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~-~~~~---~---~---~~---~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~   69 (403)
                      .+|+++|+.+++||.+ ...|++++. ....   .   .   .+   ..+.+++ ..+|+.|+++||++ ++.|+++.++
T Consensus        51 ~vvv~~~~~v~~vl~~-~~~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~-~~~g~~~~~~Rr~~-~~~fs~~~l~  127 (428)
T 1cpt_A           51 MWIATKHADVMQIGKQ-PGLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLT-SMDPPTHTAYRGLT-LNWFQPASIR  127 (428)
T ss_dssp             EEEECSHHHHHHHHHC-TTTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGG-GCCTTHHHHHHHHH-HTTSSHHHHG
T ss_pred             eEEEccHHHHHHHHcC-chhccCccccccCCcccccchhccccccccccccccc-cCChHHHHHHHHHh-hhhhCHHHHH
Confidence            5789999999999974 457888765 2221   1   1   11   0013444 44699999999998 8999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCCCceeHHHH-HHHHHhhc---cCCchhhHHHHHHHHHH-Hhcccc-cchhhhhhhh
Q 048482           70 SFQHVRDGEVSSLITKIRLSCFNKGSPLNLLEM-LLIASKEE---NTGQSNKFGELLRRLEE-QFAAFC-VGDTFLFLGC  143 (403)
Q Consensus        70 ~~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~p~~~~  143 (403)
                      .+.+.++++++++++.|..    .++.+|+... ...+++++   .|+...+-.+.+..+.. ++.... ....+|++.+
T Consensus       128 ~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~  203 (428)
T 1cpt_A          128 KLEENIRRIAQASVQRLLD----FDGECDFMTDCALYYPLHVVMTALGVPEDDEPLMLKLTQDFFGVHEPDEQAVAAPRQ  203 (428)
T ss_dssp             GGHHHHHHHHHHHHHHHHT----SSSEEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTTCC-------------
T ss_pred             HHHHHHHHHHHHHHHHHHH----hCCCeehHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHhcccccccccccccc
Confidence            9999999999999999974    2357999754 45677777   23322111111222222 111110 1112233322


Q ss_pred             hhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHh
Q 048482          144 LDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFV  223 (403)
Q Consensus       144 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~  223 (403)
                      +  .+...++..++.+.+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++
T Consensus       204 ~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~  266 (428)
T 1cpt_A          204 S--ADEAARRFHETIATFYDYFNGFTVDRRSCP------------KDDVMSLLANSKLDG---NYIDDKYINAYYVAIAT  266 (428)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHTTSC------------CSSHHHHHHHCBSSS---SBCCHHHHHHHHHHHHH
T ss_pred             c--chhhHHHHHHHHHHHHHHHHHHHHHHHcCC------------CCcHHHHHHhccccC---CCCCHHHHHHHHHHHHH
Confidence            1  013335677788889999999999887632            568999999875432   36999999999999999


Q ss_pred             cCccchHHHHHHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEeh
Q 048482          224 AGTDTTATTLEWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNA  297 (403)
Q Consensus       224 ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~  297 (403)
                      ||+|||+++++|++++|++||++|+||++|++   .++.+    +..-..-.+.+..+.   ++++||.|||||.|+++.
T Consensus       267 AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~  342 (428)
T 1cpt_A          267 AGHDTTSSSSGGAIIGLSRNPEQLALAKSDPALIPRLVDE----AVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSY  342 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECH
T ss_pred             HHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHH----HHHhCCcccccceeeCCCeeECCEEECCCCEEEeCH
Confidence            99999999999999999999999999999974   22221    111111112221222   789999999999999999


Q ss_pred             hhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCCCCccCCc
Q 048482          298 WAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPLGKVEENL  376 (403)
Q Consensus       298 ~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~  376 (403)
                      +++||||++|+||++|+||||.+          .++|||+|+|.|+|++||++|++++|+.|+++|+ +++.++.     
T Consensus       343 ~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-----  407 (428)
T 1cpt_A          343 PSANRDEEVFSNPDEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP-----  407 (428)
T ss_dssp             HHHTTCTTTCSSTTSCCTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCC-----
T ss_pred             HHhCCChhhCCChhhcCCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCc-----
Confidence            99999999999999999999941          3899999999999999999999999999999997 8876321     


Q ss_pred             cccccCCcccccCCCceeeeccC
Q 048482          377 NMFEVNGLVVHKKLPLHPVPTLY  399 (403)
Q Consensus       377 ~~~~~~~~~~~~~~~~~v~~~~r  399 (403)
                      ..  ....+.....+++|+++||
T Consensus       408 ~~--~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          408 RL--VATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             EE--CCCSSBCSEEECEEEEEEC
T ss_pred             cc--ccCccccCcceeeEEeeCC
Confidence            11  1233334445788888775


No 31 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=1.8e-50  Score=382.95  Aligned_cols=340  Identities=15%  Similarity=0.157  Sum_probs=249.4

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCcccee---eccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANIL---LYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~---~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~   79 (403)
                      .++++||+++++||.++  .|++++........   ...+.+++ ..+|+.|+++||++ ++.|+++.++.+.+.+++++
T Consensus        72 ~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~  147 (436)
T 2cd8_A           72 VWLVVGYDRARAVLADP--RFSKDWRNSTTPLTEAEAALNHNML-ESDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIV  147 (436)
T ss_dssp             EEEECSHHHHHHHHHCT--TEECCGGGCSSCCCTTGGGTCCSGG-GCCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcCC--CCccccccccccccccccccccccc-ccCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHH
Confidence            46899999999999865  68776531111110   11234444 45699999999998 89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchH
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLI  151 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  151 (403)
                      +++++.|.+.   .++.+|+...+ ..+++++   .|+..    +.+......+   +..   .              ..
T Consensus       148 ~~l~~~l~~~---~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~---~~~---~--------------~~  204 (436)
T 2cd8_A          148 DGLVDAMLAA---PDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVWTDAF---VFP---D--------------DP  204 (436)
T ss_dssp             HHHHHHHHTC---TTSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH---HSC---S--------------ST
T ss_pred             HHHHHHHHhc---cCCCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH---hcc---C--------------CH
Confidence            9999999742   35689998876 4688887   23221    2222222211   110   0              01


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHH
Q 048482          152 GRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTAT  231 (403)
Q Consensus       152 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~  231 (403)
                      ++..++...+.+++.++|++++++.            .+|+++.|++...++  +..++++++++++..+++||+|||+.
T Consensus       205 ~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTta~  270 (436)
T 2cd8_A          205 AQAQTAMAEMSGYLSRLIDSKRGQD------------GEDLLSALVRTSDED--GSRLTSEELLGMAHILLVAGHETTVN  270 (436)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTSC------------CCSHHHHHHHHHHHC--TTTSCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC------------CCCHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHHhhHHHHH
Confidence            3456778888999999999887642            568999999876542  13699999999999999999999999


Q ss_pred             HHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhhhhcCC
Q 048482          232 TLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWAIQRDP  304 (403)
Q Consensus       232 ~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~  304 (403)
                      +++|++++|++||++|+||++|++.   ++.+    +..-..-.| .+.-+.   ++++||.|||||.|+++.+++||||
T Consensus       271 ~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp  346 (436)
T 2cd8_A          271 LIANGMYALLSHPDQLAALRADMTLLDGAVEE----MLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTP  346 (436)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCT
T ss_pred             HHHHHHHHHHcCHHHHHHHhhChhhHHHHHHH----HHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCc
Confidence            9999999999999999999998632   2221    111111112 111111   7889999999999999999999999


Q ss_pred             CCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCC
Q 048482          305 QGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNG  383 (403)
Q Consensus       305 ~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~  383 (403)
                      ++|+||++|+||||          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .+  .....
T Consensus       347 ~~~~dP~~F~PeR~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~--~~~~~  412 (436)
T 2cd8_A          347 ERFPDPHRFDIRRD----------TAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPG--EL--VWYPN  412 (436)
T ss_dssp             TTSSSTTSCCTTSC----------CTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGG--GC--CBCCC
T ss_pred             ccCCCccccCCCCC----------CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCc--cc--eeccC
Confidence            99999999999996          13699999999999999999999999999999999 698854321  22  22234


Q ss_pred             cccccCCCceeeeccCCC
Q 048482          384 LVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       384 ~~~~~~~~~~v~~~~r~~  401 (403)
                      .++.+..+++|++++|++
T Consensus       413 ~~~~~~~~l~v~~~~r~~  430 (436)
T 2cd8_A          413 PMIRGLKALPIRWRRGRE  430 (436)
T ss_dssp             TTBCCBSCCEEC------
T ss_pred             cccCCcceeEEEEecCcc
Confidence            555667789999999975


No 32 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=2.5e-51  Score=387.20  Aligned_cols=345  Identities=16%  Similarity=0.136  Sum_probs=255.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCC-----CC-c--cceeecc-ccceecCCCchhhHHHHhHHHHhhchHHHhhhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPK-----TT-P--ANILLYE-CQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQH   73 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~-----~~-~--~~~~~~~-~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~   73 (403)
                      .+|++||+++++||.++.  |++++.     .. .  ...+... +.++++ .+|+.|+++||++ .+.|+++.++.+.+
T Consensus        49 ~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~  124 (419)
T 1q5d_A           49 SWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG-LPPEDHARVRKLV-NPSFTSRAIDLLRA  124 (419)
T ss_dssp             EEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT-SCHHHHHHHHHHH-GGGGSHHHHGGGHH
T ss_pred             EEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc-CCchHHHHHHHHH-HHhcCHHHHHHHHH
Confidence            578999999999998653  887762     11 0  1111101 344444 4699999999998 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeHHH-HHHHHHhhc---cCC----chhhHHHHHHHHHHHhcccccchhhhhhhhhh
Q 048482           74 VRDGEVSSLITKIRLSCFNKGSPLNLLE-MLLIASKEE---NTG----QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLD  145 (403)
Q Consensus        74 ~i~~~~~~li~~l~~~~~~~~~~vd~~~-~~~~~~~~v---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  145 (403)
                      .++++++++++.|..     ++.+|+.. .+..+++++   .|+    ..+.+......+.....    ...+|+.    
T Consensus       125 ~i~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~----~~~~P~~----  191 (419)
T 1q5d_A          125 EIQRTVDQLLDARSG-----QEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRFGSATARALG----VGLVPRV----  191 (419)
T ss_dssp             HHHHHHHHHHHHHTT-----SSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHHHHHHHHHTT----TTTSSCC----
T ss_pred             HHHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcc----cccccCC----
Confidence            999999999999963     23788865 446777777   233    22334444433333221    1112221    


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcc-cHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhc
Q 048482          146 VLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKK-DFVDILLQLRKDGMLGAELSQDNLKAVILDMFVA  224 (403)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~a  224 (403)
                        ....++..++...+.+++.++|++++++.            .+ |+++.|++...++   ..++++++++++..+++|
T Consensus       192 --~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~~dll~~ll~~~~~~---~~l~~~ei~~~~~~l~~A  254 (419)
T 1q5d_A          192 --DEETKTLVASVTEGLALLHGVLDERRRNP------------LENDVLTMLLQAEADG---SRLSTKELVALVGAIIAA  254 (419)
T ss_dssp             --CSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSCHHHHHHHHHHSS---TTCCHHHHHHHHHHHHHH
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHH
Confidence              12345677788899999999999988642            45 9999999886543   379999999999999999


Q ss_pred             CccchHHHHHHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEeh
Q 048482          225 GTDTTATTLEWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNA  297 (403)
Q Consensus       225 g~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~  297 (403)
                      |+|||+.+++|++++|++||++|+||++|++   .++.+    +..-..-.| .+..+.   ++++|+.|||||.|+++.
T Consensus       255 G~dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~  330 (419)
T 1q5d_A          255 GTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDE----VLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLI  330 (419)
T ss_dssp             HSHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEH
T ss_pred             hhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHH----HHHhCCccccccceeeCCCeEECCEEECCCCEEEecH
Confidence            9999999999999999999999999999953   22211    111111122 111122   788999999999999999


Q ss_pred             hhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCc
Q 048482          298 WAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENL  376 (403)
Q Consensus       298 ~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~  376 (403)
                      +++||||++|+||++|+||||          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.     
T Consensus       331 ~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----  395 (419)
T 1q5d_A          331 PSALRDGTVFSRPDVFDVRRD----------TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP-----  395 (419)
T ss_dssp             HHHTTCTTTSSSTTSCCTTSC----------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC-----
T ss_pred             HHhcCChhhCCChhhcCCCCC----------CCCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc-----
Confidence            999999999999999999994          13589999999999999999999999999999999 79987641     


Q ss_pred             cccccCCcccccCCCceeeeccCCCC
Q 048482          377 NMFEVNGLVVHKKLPLHPVPTLYSPY  402 (403)
Q Consensus       377 ~~~~~~~~~~~~~~~~~v~~~~r~~~  402 (403)
                      .+  ....+..+..+++|++++|+.|
T Consensus       396 ~~--~~~~~~~~~~~l~v~~~~r~~~  419 (419)
T 1q5d_A          396 VF--GYHPAFRNIESLNVILKPSKAG  419 (419)
T ss_dssp             EE--CCCSSBCCEEECEEESSCC---
T ss_pred             cc--ccccccCCCceeEEEEecCCCC
Confidence            12  2345666777999999999865


No 33 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=1.4e-50  Score=381.17  Aligned_cols=346  Identities=15%  Similarity=0.133  Sum_probs=254.5

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+++++||.++ ..|++++.... ......+.++++ .+|+.|+++||++ .+.|+++.++.+.+.++++++.+
T Consensus        50 ~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l  125 (411)
T 2jjn_A           50 VWHVFRHADVQTVLRDT-ATFSSDPTRVI-EGASPTPGMIHE-IDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSL  125 (411)
T ss_dssp             CEEECSHHHHHHHHHCT-TTEESCGGGGS-TTCCCCTTCGGG-CCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHH
T ss_pred             eEEECCHHHHHHHHcCc-ccccCcccccC-Cccccccccccc-CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHH
Confidence            57899999999999854 47887764221 111112344444 4699999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHH-HHHHHhhc---cC----CchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEM-LLIASKEE---NT----GQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++.  .     ++.+|+... ...+++++   .|    +..+.+.+....+.....        |.  ++  .+...++.
T Consensus       126 l~~--~-----~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~--------~~--~~--~p~~~~~~  186 (411)
T 2jjn_A          126 LAD--A-----GESFDLVDVLAFPLPVTIVAELLGLPPMDHEQFGDWSGALVDIQM--------DD--PT--DPALAERI  186 (411)
T ss_dssp             HHT--S-----CSEEEHHHHTTTHHHHHHHHHHHTCCSCCCSTTCCHHHHHHHSCC--------SC--TT--CHHHHHHH
T ss_pred             Hhc--C-----CCceeHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccC--------cc--cc--chHHHHHH
Confidence            988  1     237999844 45687777   12    222334333333332111        10  00  01234566


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+.+++
T Consensus       187 ~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~el~~~~~~~~~AG~eTt~~~l~  251 (411)
T 2jjn_A          187 ADVLNPLTAYLKARCAERRADP------------GDDLISRLVLAEVDG---RALDDEEAANFSTALLLAGHITTTVLLG  251 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhcccCC---CCCCHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            7788889999999999988642            568999999875432   3699999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWD  308 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~  308 (403)
                      |++++|++||++|+||++|++.   ++.+    +..-..-.|.+..+.   ++++|+.|||||.|+++.+++||||++|+
T Consensus       252 ~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~  327 (411)
T 2jjn_A          252 NIVRTLDEHPAHWDAAAEDPGRIPAIVEE----VLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHD  327 (411)
T ss_dssp             HHHHHHHHSTHHHHHHHHCGGGHHHHHHH----HHHHSCSSCEEEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSS
T ss_pred             HHHHHHHhCHHHHHHHHhCHHhHHHHHHH----HhhhCCCcCCcceEECCCeEECCEEECCCCEEEechhhhCCChhhcC
Confidence            9999999999999999999752   2211    111111122221222   78899999999999999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCCCCccCCccccccCCcccc
Q 048482          309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPLGKVEENLNMFEVNGLVVH  387 (403)
Q Consensus       309 dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~  387 (403)
                      ||++|+||||.+        ...++|||+|+|.|+|++||++|++++|+.|+++|+ +++.++.   .  +....+.+..
T Consensus       328 dP~~F~PeR~~~--------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~--~~~~~~~~~~  394 (411)
T 2jjn_A          328 DPDRFDPSRKSG--------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD---E--RLRHFEQIVL  394 (411)
T ss_dssp             STTSCCTTCCCS--------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS---C--CCCBCCSSSS
T ss_pred             CccccCCCCCCC--------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC---c--eecccccccc
Confidence            999999999853        135899999999999999999999999999999995 9986431   1  2112344555


Q ss_pred             cCCCceeeeccCCCCC
Q 048482          388 KKLPLHPVPTLYSPYP  403 (403)
Q Consensus       388 ~~~~~~v~~~~r~~~~  403 (403)
                      ....++|+++++.+-|
T Consensus       395 ~~~~lpv~~~~~~r~~  410 (411)
T 2jjn_A          395 GTRHLPVLAGSSPRQS  410 (411)
T ss_dssp             SBSCCEEECSCCTTCC
T ss_pred             CcceeEEEecCCCCCC
Confidence            5667888888876643


No 34 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=7.8e-51  Score=381.43  Aligned_cols=317  Identities=15%  Similarity=0.136  Sum_probs=240.1

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+.+++||.+ ...|++++......... .+...++..+|+.|+++||++ ++.|+++.++.+.+.+.+.++++
T Consensus        48 ~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l  124 (396)
T 3oft_A           48 HWIAARGDVVRELWGD-AERLSSQCLAVTPGLGK-VMQFIPLQQDGAEHKAFRTPV-MKGLASRFVVALEPKVQAVARKL  124 (396)
T ss_dssp             EEEECSHHHHHHHHHC-TTTEESTTCCSSTTHHH-HHCCTTTTCCHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcC-cccccCCcccCCCcccc-ccccCccccCCcHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHH
Confidence            4789999999999964 46888877432222111 123345556799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchh-hHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSN-KFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNAT  157 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  157 (403)
                      ++.|...     +.+|+...+ ..++.++   .|+... ...........++.                 ....++..++
T Consensus       125 ~~~l~~~-----~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~  182 (396)
T 3oft_A          125 MESLRPR-----GSCDFVSDFAEILPLNIFLTLIDVPLEDRPRLRQLGVQLTR-----------------PDGSMTVEQL  182 (396)
T ss_dssp             HHHHGGG-----SEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHS-----------------CCSSCCHHHH
T ss_pred             HHHhhhc-----CCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhC-----------------CCCHHHHHHH
Confidence            9999742     367875544 4455554   333222 11111111111111                 0113456778


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHHHH
Q 048482          158 ARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAM  237 (403)
Q Consensus       158 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~~l  237 (403)
                      .+.+.+++.++|+++++..            .+|+++.|++...++   ..++++++++.+..+++||+|||+.+++|++
T Consensus       183 ~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~el~~~~~~l~~AG~dTta~~l~~~l  247 (396)
T 3oft_A          183 KQAADDYLWPFIEKRMAQP------------GDDLFSRILSEPVGG---RPWTVDEARRMCRNLLFGGLDTVAAMIGMVA  247 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTSCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            8899999999999998762            679999999875543   3699999999999999999999999999999


Q ss_pred             HHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcc--eEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCCCC
Q 048482          238 AELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYL--KCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPED  312 (403)
Q Consensus       238 ~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l--~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~  312 (403)
                      ++|++||++|+||++|++.+-.    .-.+.++-.|-.  .-+.   ++++|+.|||||.|+++.+++||||++|+||++
T Consensus       248 ~~L~~~P~~~~~l~~E~~~l~a----~i~E~lRl~p~~~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~  323 (396)
T 3oft_A          248 LHLARHPEDQRLLRERPDLIPA----AADELMRRYPTVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEE  323 (396)
T ss_dssp             HHHHHCHHHHHHHHHCGGGHHH----HHHHHHHHCCCBEEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTS
T ss_pred             HHHHhCHHHHHHHHhCHHhHHH----HHHHHHHhcCcccCceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCc
Confidence            9999999999999999853211    000111111111  1111   789999999999999999999999999999999


Q ss_pred             CCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCC
Q 048482          313 FLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGK  371 (403)
Q Consensus       313 F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~  371 (403)
                      |+||||+.        +..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.
T Consensus       324 F~PeR~~~--------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~  375 (396)
T 3oft_A          324 VRFDRGLA--------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDK  375 (396)
T ss_dssp             CCSCCCCC--------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSS
T ss_pred             cCCCCCCC--------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCC
Confidence            99999974        34799999999999999999999999999999999 99987553


No 35 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=9.7e-51  Score=380.68  Aligned_cols=340  Identities=16%  Similarity=0.174  Sum_probs=252.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccc------eee-ccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPAN------ILL-YECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~------~~~-~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      .++++||+++++||.+  ..|++++......      .+. ..+.++++ .+|+.|+++||++ .+.|+++.++.+.+.+
T Consensus        35 ~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i  110 (397)
T 3buj_A           35 VWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILF-QDEPDHGRLRGVV-GPAFSPSALRRLEPVI  110 (397)
T ss_dssp             CEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGG-CCTTHHHHHHHHH-GGGSSTTTTGGGHHHH
T ss_pred             eEEEcCHHHHHHHHcC--CCcccCccccccccccccccccccccccccc-CCchhHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence            5789999999999974  4677553211000      111 10344444 4699999999998 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHH-HHHHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLE-MLLIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~-~~~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +++++++++.|..     ++.+|+.. ....+++++   .|+..    +.+......+...+.   .     .   +.  
T Consensus       111 ~~~~~~l~~~l~~-----~~~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~---~-----~---~~--  172 (397)
T 3buj_A          111 AGTVDDLLRPALA-----RGAMDVVDELAYPLALRAVLGLLGLPAADWGAVGRWSRDVGRTLD---R-----G---AS--  172 (397)
T ss_dssp             HHHHHHHHHHHHT-----TTEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHGGGC---S-----S---CC--
T ss_pred             HHHHHHHHHHHhh-----cCCeehHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHHhhcC---C-----C---CC--
Confidence            9999999999973     34799865 456788887   23322    223333222221111   0     0   00  


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      +...++..++.+.+.+++.++|+++++..            .+|+++.|++...++    .++++++++++..+++||+|
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~----~ls~~ei~~~~~~~~~AG~~  236 (397)
T 3buj_A          173 AEDMRRGHAAIAEFADYVERALARRRREG------------GEDLLALMLDAHDRG----LMSRNEIVSTVVTFIFTGHE  236 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CCSHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHcCC------------CCCHHHHHHHhhhcC----CCCHHHHHHHHHHHHHcCch
Confidence            12345667788889999999999988752            568999999876432    29999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhh
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQ  301 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~  301 (403)
                      ||+.+++|++++|++||++|+||++|++.   ++.+    +..-..-.|.+.-+.   ++++|+.|||||.|.++.+++|
T Consensus       237 Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~  312 (397)
T 3buj_A          237 TVASQVGNAVLSLLAHPDQLDLLRRRPDLLAQAVEE----CLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAAN  312 (397)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHH----HHHHSCSCCEEEEEESSCEEETTEEECTTCEEEEEHHHHT
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHhhCHHHHHHHHHH----HHhhcCcccCcceEECCCEEECCEEECCCCEEEEChhhhC
Confidence            99999999999999999999999999631   1111    011111112111111   7889999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccc
Q 048482          302 RDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFE  380 (403)
Q Consensus       302 rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~  380 (403)
                      |||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.| ++| ++++.++..  .  ...
T Consensus       313 rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~--~--~~~  377 (397)
T 3buj_A          313 RDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASD--A--LAY  377 (397)
T ss_dssp             TCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCST--T--CCB
T ss_pred             CCccccCCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCc--c--ccc
Confidence            999999999999999995          248999999999999999999999999999 999 899876521  1  222


Q ss_pred             cCCcccccCCCceeeeccC
Q 048482          381 VNGLVVHKKLPLHPVPTLY  399 (403)
Q Consensus       381 ~~~~~~~~~~~~~v~~~~r  399 (403)
                      ..+.++.+..+++|++++|
T Consensus       378 ~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          378 QPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             CSCSSCCCBSCCEEECCTT
T ss_pred             ccccccCCCcceeEEecCC
Confidence            3455667778999999887


No 36 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=3.3e-50  Score=377.56  Aligned_cols=342  Identities=15%  Similarity=0.152  Sum_probs=253.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCC--C-Cccceeec--cccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPK--T-TPANILLY--ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDG   77 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~--~-~~~~~~~~--~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~   77 (403)
                      .++++||+++++||.++  .|++++.  . .....+..  .+.++ +..+|+.|+++||++ ++.|+++.++.+.+.+++
T Consensus        45 ~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~  120 (403)
T 3aba_A           45 AWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSL-LWQDEPEHTSDRKLL-AKEFTVRRMQALRPNIQR  120 (403)
T ss_dssp             EEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCC-TTCCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHH
T ss_pred             EEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccc-ccCCchhHHHHHHHH-HhhcCHHHHHHHHHHHHH
Confidence            57899999999999854  5777642  1 11111111  23444 455799999999998 899999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHH
Q 048482           78 EVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        78 ~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  153 (403)
                      +++++++.|.+    .++.+|+...+ ..+++++   .|+...+-.+.+..+...+....    .          . .++
T Consensus       121 ~~~~ll~~l~~----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~----~----------~-p~~  181 (403)
T 3aba_A          121 IVDEHLDAIEA----RGGPVDLVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAMMRVD----Q----------D-AAA  181 (403)
T ss_dssp             HHHHHHHHHHH----HCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHSBSS----S----------C-HHH
T ss_pred             HHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcc----C----------c-HHH
Confidence            99999999974    24579988655 4677777   23322111111111111111100    0          0 145


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTL  233 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l  233 (403)
                      ..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+.++
T Consensus       182 ~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~dTt~~~l  246 (403)
T 3aba_A          182 TEAAGMRLGGLLYQLVQERRANP------------GDDLISALITTEDPD---GVVDDMFLMNAAGTLLIAAHDTTACMI  246 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTSCCTT---CCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66777889999999999988752            568999999875432   379999999999999999999999999


Q ss_pred             HHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhhhhcCCCC
Q 048482          234 EWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQG  306 (403)
Q Consensus       234 ~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~  306 (403)
                      +|++++|++||++|+||++|++.   ++.+    +..-..-.| .+.-+.   ++++||.|||||.|+++.+++||||++
T Consensus       247 ~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~  322 (403)
T 3aba_A          247 GLGTALLLDSPDQLALLREDPSLVGNAVEE----LLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAF  322 (403)
T ss_dssp             HHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred             HHHHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhh
Confidence            99999999999999999999632   2211    111112222 121222   788999999999999999999999999


Q ss_pred             CCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCcc
Q 048482          307 WDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLV  385 (403)
Q Consensus       307 ~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~  385 (403)
                      |+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .  .....+.+
T Consensus       323 ~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~--~~~~~~~~  388 (403)
T 3aba_A          323 VEEPERFDITRRP----------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVE--E--LRFRHDMV  388 (403)
T ss_dssp             SSSTTSCCTTSCC----------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG--G--SCBCTTBS
T ss_pred             CCCccccCCCCCC----------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCcc--c--cccccCcc
Confidence            9999999999983          3589999999999999999999999999999999 588765421  1  22334556


Q ss_pred             cccCCCceeeeccCC
Q 048482          386 VHKKLPLHPVPTLYS  400 (403)
Q Consensus       386 ~~~~~~~~v~~~~r~  400 (403)
                      ..+...++|++++|.
T Consensus       389 ~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          389 FYGVHELPVTWHHHH  403 (403)
T ss_dssp             SCCBSCCEEECCCCC
T ss_pred             cCCcceeEEEecCCC
Confidence            677789999998884


No 37 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=1e-50  Score=383.32  Aligned_cols=345  Identities=13%  Similarity=0.095  Sum_probs=253.9

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+.+++||. +...|++++.... ......+...++..+|+.|+++||++ ++.|+++.++.+.+.+++.++++
T Consensus        64 ~~vv~~~~~v~~vl~-~~~~f~~~~~~~~-~~~~~~~~~~~~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l  140 (421)
T 3lxh_A           64 HWIATRGTLIDEIYR-SPERFSSRVIWVP-REAGEAYDMVPTKLDPPEHTPYRKAI-DKGLNLAEIRKLEDQIRTIAVEI  140 (421)
T ss_dssp             EEEECSHHHHHHHHT-CTTTEETTCCSSS-HHHHHHCCCTTTTCCTTTHHHHHHHH-HHHHSHHHHHTTHHHHHHHHHHH
T ss_pred             eEEEcCHHHHHHHHc-ChhhccCCcccCC-cccccccccCCccCCcHHHHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHH
Confidence            478999999999995 5568888774322 22111112344555699999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHH-HHhcccccchhhhhhhhhhhhhchHHHHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLE-EQFAAFCVGDTFLFLGCLDVLSGLIGRLNAT  157 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  157 (403)
                      ++.|..     ++.+|+...+ ..++.++   .|+...+-...+..+. .++...   ..+|        ....++..++
T Consensus       141 ~~~l~~-----~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~---~~~p--------~~~~~~~~~~  204 (421)
T 3lxh_A          141 IEGFAD-----RGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPS---GNTP--------EEQGRSLEAA  204 (421)
T ss_dssp             HHTTTT-----TSEEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCC---CSSH--------HHHHHHHHHH
T ss_pred             HHHHhh-----cCCeehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccc---cCCC--------chhHHHHHHH
Confidence            999863     3468865444 4466666   2332221111122222 221110   0111        1234667788


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHHHH
Q 048482          158 ARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAM  237 (403)
Q Consensus       158 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~~l  237 (403)
                      .+.+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+.+++|++
T Consensus       205 ~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l  269 (421)
T 3lxh_A          205 NKGFFEYVAPIIAARRGGS------------GTDLITRILNVEIDG---KPMPDDRALGLVSLLLLGGLDTVVNFLGFMM  269 (421)
T ss_dssp             HHHHHHHHHHHHHHHTTCC------------CCSHHHHHHTSCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            8999999999999988752            679999999876543   3799999999999999999999999999999


Q ss_pred             HHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcc--eEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCCCC
Q 048482          238 AELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYL--KCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPED  312 (403)
Q Consensus       238 ~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l--~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~  312 (403)
                      ++|++||++|+||++|++.+-.-    -.+.++-.|-.  ..+.   ++++|+.|||||.|+++.+++||||++|+||++
T Consensus       270 ~~L~~~P~~~~~l~~E~~~l~a~----i~E~lRl~p~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~  345 (421)
T 3lxh_A          270 IYLSRHPETVAEMRREPLKLQRG----VEELFRRFAVVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMT  345 (421)
T ss_dssp             HHHTTCHHHHHHHHHCHHHHHHH----HHHHHHHCCCBEEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTS
T ss_pred             HHHHhCHHHHHHHHhCHHHHHHH----HHHHHHhcCccCCceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCe
Confidence            99999999999999998743210    01111111222  1111   889999999999999999999999999999999


Q ss_pred             CCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCcccccCCC
Q 048482          313 FLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVVHKKLP  391 (403)
Q Consensus       313 F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (403)
                      |+||||          +..|+|||+|+|.|+|++||++|++++|+.|+++| +|++.++..     .....+.+ .....
T Consensus       346 F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~-----~~~~~~~~-~~~~~  409 (421)
T 3lxh_A          346 VDLSRR----------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAV-----PIYHSGIV-AAVEN  409 (421)
T ss_dssp             CCTTCS----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCC-----CEEECSSB-CEEEC
T ss_pred             eCCCCC----------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCC-----ceeccccc-cCcee
Confidence            999995          34699999999999999999999999999999999 999875532     12223333 33347


Q ss_pred             ceeeeccCCC
Q 048482          392 LHPVPTLYSP  401 (403)
Q Consensus       392 ~~v~~~~r~~  401 (403)
                      ++|+++||+.
T Consensus       410 lpv~~~p~~~  419 (421)
T 3lxh_A          410 IPLEWEPQRV  419 (421)
T ss_dssp             CEEECCCC--
T ss_pred             eeEEEecccc
Confidence            8999998864


No 38 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=4.7e-51  Score=384.34  Aligned_cols=340  Identities=14%  Similarity=0.133  Sum_probs=252.0

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCC-ccc--ee-e-ccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTT-PAN--IL-L-YECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDG   77 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~-~~~--~~-~-~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~   77 (403)
                      .++++||+++++||.++ ..|++++... ...  .+ . ..+.+++++ +|+.|+++||++ ++.|+++.++.+.+.+++
T Consensus        53 ~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~  129 (414)
T 2uuq_A           53 YYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ-DPPVHTEFRKLV-SRGFTPRQVETVEPTVRK  129 (414)
T ss_dssp             EEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC-CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC-CchhHHHHHHHh-hhhcCHHHHHHHHHHHHH
Confidence            47899999999999865 6788876542 121  21 1 224555555 699999999998 899999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeHH-HHHHHHHhhc---cCCc----hhhHHHHHHHHHHHhcccccchhh-hhhhhhhhhh
Q 048482           78 EVSSLITKIRLSCFNKGSPLNLL-EMLLIASKEE---NTGQ----SNKFGELLRRLEEQFAAFCVGDTF-LFLGCLDVLS  148 (403)
Q Consensus        78 ~~~~li~~l~~~~~~~~~~vd~~-~~~~~~~~~v---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~  148 (403)
                      +++++++.|...     +.+|+. +++..+++++   .|+.    .+.+......+...       ..+ |.        
T Consensus       130 ~~~~ll~~l~~~-----~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~-------~~~~p~--------  189 (414)
T 2uuq_A          130 FVVERLEKLRAN-----GGGDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAA-------NAVDGA--------  189 (414)
T ss_dssp             HHHHHHHHHHHT-----TEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHH-------HHC-----------
T ss_pred             HHHHHHHHHHhc-----CCccHHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHHhh-------cccCCc--------
Confidence            999999999752     359996 5567888888   2332    22333332222211       011 11        


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccc
Q 048482          149 GLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDT  228 (403)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~t  228 (403)
                       . .+..++...+.+++.++|++++++.            .+|+++.|++....+ ++..++++++++++..+++||+||
T Consensus       190 -~-~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~l~~AG~eT  254 (414)
T 2uuq_A          190 -T-TGALDAVGSMMAYFTGLIERRRTEP------------ADDAISHLVAAGVGA-DGDTAGTLSILAFTFTMVTGGNDT  254 (414)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHTTSC------------CSSHHHHHHHTTTTC-TTCHHHHHHHHHHHHHHHHHHSHH
T ss_pred             -h-hHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhccccc-CCCCCCHHHHHHHHHHHHHhhHHH
Confidence             0 1344567788889999999887642            568999999875410 123689999999999999999999


Q ss_pred             hHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhc
Q 048482          229 TATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQR  302 (403)
Q Consensus       229 t~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~r  302 (403)
                      |+++++|++++|++||++|+||++|++.   ++.+    +..-..-.|.+..+.   ++++|+.|||||.|+++.+++||
T Consensus       255 t~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r  330 (414)
T 2uuq_A          255 VTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEE----LLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANR  330 (414)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTT
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHH----HHHhCCCcCCcceEECCCEEECCEEECCCCEEEeChhhhCC
Confidence            9999999999999999999999999632   2211    111111122222222   78999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccc
Q 048482          303 DPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFE  380 (403)
Q Consensus       303 d~~~~-~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~  380 (403)
                      ||++| +||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++    .  ...
T Consensus       331 dp~~~G~dP~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~--~~~  394 (414)
T 2uuq_A          331 DERQYGPDAAELDVTRCP----------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES----R--IVW  394 (414)
T ss_dssp             CHHHHCTTTTSCCTTCCC----------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----G--CEE
T ss_pred             CHHHhCCCchhcCCCCCC----------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----C--ccc
Confidence            99999 999999999984          2589999999999999999999999999999999 6998632    1  222


Q ss_pred             cCCcccccCCCceeeeccCC
Q 048482          381 VNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       381 ~~~~~~~~~~~~~v~~~~r~  400 (403)
                      ..+.++.+..+++|+++||.
T Consensus       395 ~~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          395 SGGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             CCCSSBCCEEECEEEEC---
T ss_pred             cccccccCcceeEEEecCCC
Confidence            34556677778999998874


No 39 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=9.7e-50  Score=376.55  Aligned_cols=354  Identities=11%  Similarity=0.122  Sum_probs=255.4

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||++++.++  +...|+.++...........|.+.++..+|+.|+.+|+++ ++.|+++.++.+.+.+++.++++
T Consensus        46 ~v~v~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l  122 (417)
T 1izo_A           46 FICMTGAEAAKVFY--DTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAA  122 (417)
T ss_dssp             EEEECSHHHHHHHT--CTTTEECTTCSCHHHHTTTTCTTCGGGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHh--cccccccccccccchhhhhccccceeecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHH
Confidence            46899999998555  3345765433221000011133334556699999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHHHHHHhhcc---CC---chhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEMLLIASKEEN---TG---QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNA  156 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~~~~~~~v~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  156 (403)
                      ++.|.     .++.+|+.+.+..+++++.   ++   .+.++.+....+...+..+..  .          ....++..+
T Consensus       123 ~~~l~-----~~~~~dl~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~  185 (417)
T 1izo_A          123 VTRWE-----KADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGA--V----------GPRHWKGRR  185 (417)
T ss_dssp             HHHHT-----TSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHHHHHHHHHHHTTC--C----------SHHHHHHHH
T ss_pred             HHHHh-----cCCCeeHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhhccc--C----------CccchhHHH
Confidence            99985     3568999999999999982   12   122343343333333222110  0          012234567


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHHH
Q 048482          157 TARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWA  236 (403)
Q Consensus       157 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~~  236 (403)
                      +.+.+.+++.++|+++++....   ..     .+|+++.|++....+  +..++++++...+..++ ||++||+.+++|+
T Consensus       186 ~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~--g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~  254 (417)
T 1izo_A          186 ARPRAEEWIEVMIEDARAGLLK---TT-----SGTALHEMAFHTQED--GSQLDSRMAAIELINVL-RPIVAISYFLVFS  254 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSC---CC-----TTSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHH-HHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccC---CC-----cCCHHHHHHHhcccc--CCCCCHHHHHHHHHHHH-hhhhHHHHHHHHH
Confidence            7888999999999998875311   12     568999999875432  23588887777776654 8999999999999


Q ss_pred             HHHHhhChhhHHHHHHH----HHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCC
Q 048482          237 MAELVKNPTSMKRAREE----VRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDR  309 (403)
Q Consensus       237 l~~L~~~p~~q~~l~~E----i~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~d  309 (403)
                      +++|++||++|++|++|    ++.++.+.    ..-..-.+.+....   ++++|+.|||||.|+++.+++||||++|+|
T Consensus       255 l~~L~~~P~~~~~l~~E~~~~l~a~i~E~----lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~d  330 (417)
T 1izo_A          255 ALALHEHPKYKEWLRSGNSREREMFVQEV----RRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDH  330 (417)
T ss_dssp             HHHHHHSTHHHHHHHTCCHHHHHHHHHHH----HHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSS
T ss_pred             HHHHhhCHHHHHHHHhcCCHHHHHHHHHH----hhcCCcccccceeecCCeeECCEEECCCCEEEecHHHhhcCccccCC
Confidence            99999999999999997    12222110    11111111111111   788999999999999999999999999999


Q ss_pred             CCCCCCccccccccCCCCCCccccccCCC----CCCCCChHHHHHHHHHHHHHHHhcceeecCCCCccCCccccccCCcc
Q 048482          310 PEDFLSDKFLNSLVDCKSQDFEFISFGAG----RRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLV  385 (403)
Q Consensus       310 p~~F~PeRf~~~~~~~~~~~~~~~~FG~G----~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  385 (403)
                      |++|+||||++.+    ..+..|+|||+|    +|.|+|++||++|++++|+.|+++|+|++.++.    ..+. ...++
T Consensus       331 p~~F~P~R~~~~~----~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~----~~~~-~~~~~  401 (417)
T 1izo_A          331 PDEFRPERFAERE----ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS----LHYS-LARMP  401 (417)
T ss_dssp             TTSCCGGGGTTCC----CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC----CCCC-SSSSS
T ss_pred             ccccChhhcCCCC----CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC----cCcc-cccCC
Confidence            9999999999753    245689999999    599999999999999999999999999986542    1122 23456


Q ss_pred             cccCCCceeeeccCC
Q 048482          386 VHKKLPLHPVPTLYS  400 (403)
Q Consensus       386 ~~~~~~~~v~~~~r~  400 (403)
                      +.|+.+++|++++|+
T Consensus       402 ~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          402 SLPESGFVMSGIRRK  416 (417)
T ss_dssp             CCCTTCCEEEEEEEC
T ss_pred             CCCCCCceEeeeeCC
Confidence            788889999999986


No 40 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=5.8e-50  Score=377.71  Aligned_cols=312  Identities=15%  Similarity=0.186  Sum_probs=242.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceee-------ccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILL-------YECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~-------~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      .+|++||+++++||.++  .|++++.........       ..+.++ +..+|+.|+++||++ .+.|++++++.+.+.+
T Consensus        55 ~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i  130 (417)
T 3tyw_A           55 AWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPF-IRTDAPEHTRYRRML-LPAFTVRRVRAMRPAV  130 (417)
T ss_dssp             EEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCG-GGCCHHHHHHHHHHH-GGGGCHHHHHHTHHHH
T ss_pred             eEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccch-hhcCCcHHHHHHHHH-HhhhCHHHHHHHHHHH
Confidence            47899999999999865  677754322111111       123444 445699999999998 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cC----CchhhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NT----GQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +++++++++.|..    .++++|+...+ ..+++++   .|    +..+.+......+..   .                
T Consensus       131 ~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~---~----------------  187 (417)
T 3tyw_A          131 QARVDEILDGMLA----AGGPVDLVSAYANAVSTSVICELLGIPRHDLEFFRDVTRISGS---R----------------  187 (417)
T ss_dssp             HHHHHHHHHHHHH----HCSSEEHHHHTHHHHHHHHHHHHHTCCTTTTTHHHHHHHHHHS---S----------------
T ss_pred             HHHHHHHHHHHHh----hCCCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc---c----------------
Confidence            9999999999986    35679998877 4677777   22    222333332222111   0                


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ....++..++...+.+++.++|++++++.            .+|+++.|++...+++   .++++++++.+..+++||+|
T Consensus       188 ~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~~---~ls~~el~~~~~~l~~AG~e  252 (417)
T 3tyw_A          188 NSTAEQVSEALGGLFGLLGGLVAERREEP------------RDDLISKLVTDHLVPG---NVTTEQLLSTLGITINAGRE  252 (417)
T ss_dssp             SSCTTHHHHHHHHHHHHHHHHHHHHHSSC------------CSSHHHHHHHHTTTTT---SSCHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------CCCHHHHHHHhcccCC---CCCHHHHHHHHHHHHhhhHH
Confidence            11234567788889999999999988642            5799999999876543   79999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCc-c-eEEE--EeecccccCCCcEEEEehhhh
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDY-L-KCVS--VRWRDYNILAKTRVIVNAWAI  300 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~-l-~a~i--~~~~g~~ip~Gt~v~~~~~~~  300 (403)
                      ||+.+++|++++|++||++|+||++|++.   ++.+    +..-..-.+. + +.+.  ++++|+.|||||.|+++.+++
T Consensus       253 Tta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~  328 (417)
T 3tyw_A          253 TTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDE----LLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGA  328 (417)
T ss_dssp             HHHHHHHHHHHHHHHCTHHHHHHHHCGGGHHHHHHH----HHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHH
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHhChHHHHHHHHH----HHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhh
Confidence            99999999999999999999999999643   2221    1111122232 1 2222  789999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCC
Q 048482          301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLG  370 (403)
Q Consensus       301 ~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~  370 (403)
                      ||||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+
T Consensus       329 ~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          329 NHDPEQFDDPERVDFHRTD----------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             TTCTTTSSSTTSCCTTCSC----------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             cCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            9999999999999999993          3589999999999999999999999999999999 9998744


No 41 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=4.3e-50  Score=377.44  Aligned_cols=338  Identities=16%  Similarity=0.147  Sum_probs=251.9

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCcc-----ceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPA-----NILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDG   77 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~-----~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~   77 (403)
                      .++++||+++++||.++  .|++++.....     ......+.+++ ..+|+.|+++||++ .+.|+++.++.+.+.+++
T Consensus        45 ~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~  120 (411)
T 3a4g_A           45 VWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTPMMI-LMDPPDHTRLRKLV-GRSFTVRRMNELEPRITE  120 (411)
T ss_dssp             EEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSCCGG-GCCTTHHHHHHHHH-HTTCCHHHHHHHHHHHHH
T ss_pred             EEEEecHHHHHHHHhCC--CcccccccccccccccccCcccccccc-cCCchHHHHHHHHh-hhhhCHHHHHHHHHHHHH
Confidence            47899999999999865  38877542211     11111234544 45699999999998 899999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeHHHH-HHHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhc
Q 048482           78 EVSSLITKIRLSCFNKGSPLNLLEM-LLIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSG  149 (403)
Q Consensus        78 ~~~~li~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  149 (403)
                      +++++++.|..     ++.+|+... ...+++++   .|+..    +.+......   ++..      .|        + 
T Consensus       121 ~~~~l~~~l~~-----~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~---~~~~------~p--------~-  177 (411)
T 3a4g_A          121 IADGLLAGLPT-----DGPVDLMREYAFQIPVQVICELLGVPAEDRDDFSAWSSV---LVDD------SP--------A-  177 (411)
T ss_dssp             HHHHHHHHSCS-----SSCEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHH---HTTS------SC--------T-
T ss_pred             HHHHHHHHHHh-----cCCccHHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHH---Hhcc------CC--------H-
Confidence            99999999863     357998644 45777777   23221    222222111   1110      11        1 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccch
Q 048482          150 LIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTT  229 (403)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt  229 (403)
                        ++..++...+.+++.++|++++++.            .+|+++.|++...++  +..++++++++++..+++||+|||
T Consensus       178 --~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~dTt  241 (411)
T 3a4g_A          178 --DDKNAAMGKLHGYLSDLLERKRTEP------------DDALLSSLLAVSDED--GDRLSQEELVAMAMLLLIAGHETT  241 (411)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCCTT--CCCCCHHHHHHHHHHHHHHHSHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHhchhhH
Confidence              2455677888999999999988742            568999999875411  236999999999999999999999


Q ss_pred             HHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhhhhc
Q 048482          230 ATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWAIQR  302 (403)
Q Consensus       230 ~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~r  302 (403)
                      +.+++|++++|++||++|+||++|++.   ++.+    +..-..-.| .+.-+.   ++++|+.|||||.|+++.+++||
T Consensus       242 ~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r  317 (411)
T 3a4g_A          242 VNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEE----FLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR  317 (411)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTT
T ss_pred             HHHHHHHHHHHHhCHHHHHHHhcCHHHHHHHHHH----HHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCC
Confidence            999999999999999999999999632   2211    111111112 111112   78899999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCcccccc
Q 048482          303 DPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEV  381 (403)
Q Consensus       303 d~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~  381 (403)
                      ||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .  ....
T Consensus       318 dp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~--~~~~  383 (411)
T 3a4g_A          318 DADWMPEPDRLDITRDA----------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLD--E--LVYR  383 (411)
T ss_dssp             CTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--CCBC
T ss_pred             ChhhcCCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCcc--c--cccc
Confidence            99999999999999983          3589999999999999999999999999999999 698865321  1  2223


Q ss_pred             CCcccccCCCceeeeccCCC
Q 048482          382 NGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       382 ~~~~~~~~~~~~v~~~~r~~  401 (403)
                      ...++.+..+++|++++|+.
T Consensus       384 ~~~~~~~~~~lpv~~~~r~~  403 (411)
T 3a4g_A          384 ESTLVRGLSRMPVTMGPRSA  403 (411)
T ss_dssp             CCTTBCCBSCCEEECCCCCC
T ss_pred             cCccccCcceeEEEecCcch
Confidence            35556677799999999976


No 42 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.5e-50  Score=380.64  Aligned_cols=338  Identities=17%  Similarity=0.115  Sum_probs=246.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeec--cc-cceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLY--EC-QGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~--~~-~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~   79 (403)
                      .+++++|+.+++||+ +...|++++..........  .. .+.++..+|+.|+++||++ ++.|+++.++.+.+.+++++
T Consensus        64 ~~vv~~~~~v~~vl~-~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~  141 (415)
T 3mgx_A           64 FWSVFSHRACAAVLA-PSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQHRKLRKLV-GPLLSRAAARKLAERVRIEV  141 (415)
T ss_dssp             EEEECSHHHHHHHSC-TTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHHHHHHHHH-GGGSSHHHHHHSHHHHHHHH
T ss_pred             EEEEecHHHHHHHHh-ChhhhcCCccccccccccccccccCCCccccCcHHHHHHHHHh-HhhhCHHHHHHHHHHHHHHH
Confidence            478999999999995 4457887765433221110  01 3345556799999999998 89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHH
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLN  155 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  155 (403)
                      +++++.|..     ++.+|+...+ ..+++++   .|+...+-...+......+.........|            ....
T Consensus       142 ~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~  204 (415)
T 3mgx_A          142 GDVLGRVLD-----GEVCDAATAIGPRIPAAVVCEILGVPAEDEDMLIDLTNHAFGGEDELFDG------------MTPR  204 (415)
T ss_dssp             HHHTTTSSS-----SSCEESTTTTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHTSCCC----C------------CCHH
T ss_pred             HHHHHHHHh-----cCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcccCcccch------------HHHH
Confidence            999998863     3368887766 5677777   22322111122222222111111111111            1123


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHH
Q 048482          156 ATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEW  235 (403)
Q Consensus       156 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~  235 (403)
                      ++...+.+++.++|++++++.            .+|+++.|++..       .++++++++++..+++||+|||+.+++|
T Consensus       205 ~~~~~l~~~~~~~i~~rr~~~------------~~dll~~ll~~~-------~ls~~el~~~~~~ll~AG~eTTa~~l~~  265 (415)
T 3mgx_A          205 QAHTEILVYFDELITARRKEP------------GDDLVSTLVTDD-------DLTIDDVLLNCDNVLIGGNETTRHAITG  265 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCT-------TSCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhCC-------CCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            677888999999999988753            578999999863       6899999999999999999999999999


Q ss_pred             HHHHHhhChhhHHHHHHHH---HHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCC
Q 048482          236 AMAELVKNPTSMKRAREEV---RSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDR  309 (403)
Q Consensus       236 ~l~~L~~~p~~q~~l~~Ei---~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~d  309 (403)
                      ++++|++||++|+||++|+   ..++.+.    ..-..-.+.+.-+.   ++++|+.||||+.|+++.+++||||++|+|
T Consensus       266 ~l~~L~~~P~~~~~l~~E~~~l~a~i~E~----LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~d  341 (415)
T 3mgx_A          266 AVHALATVPGLLTALRDGSADVDTVVEEV----LRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDD  341 (415)
T ss_dssp             HHHHHHHSTTHHHHHHHTSSCHHHHHHHH----HHHHCCBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSS
T ss_pred             HHHHHHHCHHHHHHHHhChHhHHHHHHHH----HHhcCcccccceecCCCeeECCEEECCCCEEEechHHhCCChhhcCC
Confidence            9999999999999999996   1111110    00001111111111   889999999999999999999999999999


Q ss_pred             CCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCccccc
Q 048482          310 PEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVVHK  388 (403)
Q Consensus       310 p~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~  388 (403)
                      |++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.       ....+.+...
T Consensus       342 P~~F~P~R~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-------~~~~~~~~~~  404 (415)
T 3mgx_A          342 PDTFLPGRKP----------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREP-------AWLRAIVVQG  404 (415)
T ss_dssp             TTSCCTTCCS----------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC-------EECSCSSBCC
T ss_pred             ccccCCCCCC----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCc-------ccccCCcccC
Confidence            9999999973          3589999999999999999999999999999999 89986432       1122334444


Q ss_pred             CCCceeeeccC
Q 048482          389 KLPLHPVPTLY  399 (403)
Q Consensus       389 ~~~~~v~~~~r  399 (403)
                      ...++|++++|
T Consensus       405 ~~~lpv~~~~R  415 (415)
T 3mgx_A          405 YRELPVRFTGR  415 (415)
T ss_dssp             EEECEEEEEEC
T ss_pred             ceeeeEEEecC
Confidence            55788888876


No 43 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=5.2e-50  Score=378.48  Aligned_cols=341  Identities=17%  Similarity=0.163  Sum_probs=245.0

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCC-------C--ccce----e-eccccceecCCCchhhHHHHhHHHHhhchHHHh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKT-------T--PANI----L-LYECQGIGFSNYGEYWRQVRKICVLQLLSVRRV   68 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~-------~--~~~~----~-~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l   68 (403)
                      .++++||+.+++||.++  .|++++..       .  ....    + ...+.+++++ +|+.|+++||++ ++.|+++.+
T Consensus        47 ~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l  122 (425)
T 2z3t_A           47 TYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVENWLVFL-DPPHHTELRSLL-TTEFSPSIV  122 (425)
T ss_dssp             EEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTTCGGGC-CHHHHHHHHHHH-HGGGSHHHH
T ss_pred             eEEEcCHHHHHHHHcCC--CccccccccccccccccccccccccccccccccccccC-CchHHHHHHHHH-HHhhCHHHH
Confidence            47899999999999754  78887642       1  1110    1 1112455554 599999999998 899999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCCCceeHHHH-HHHHHhhc---cCCc----hhhHHHHHHHHHHHhcccccchhhhh
Q 048482           69 QSFQHVRDGEVSSLITKIRLSCFNKGSPLNLLEM-LLIASKEE---NTGQ----SNKFGELLRRLEEQFAAFCVGDTFLF  140 (403)
Q Consensus        69 ~~~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~  140 (403)
                      +.+.+.++++++++++.|..    . +.+|+... ...+++++   .|+.    .+.+......+...      ...+| 
T Consensus       123 ~~~~~~i~~~~~~ll~~l~~----~-g~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~------~~~~~-  190 (425)
T 2z3t_A          123 TGLRPRIAELASALLDRLRA----Q-RRPDLVEGFAAPLPILVISALLGIPEEDHTWLRANAVALQEA------STTRA-  190 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT----S-SSCBHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHTT------CTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHh----c-CCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhh------ccccC-
Confidence            99999999999999999964    2 37898764 46788887   2332    22233322222211      11111 


Q ss_pred             hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHH
Q 048482          141 LGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILD  220 (403)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~  220 (403)
                         +.  ....++..++...+.+++.+.|++++++.            .+|+++.|++...++   ..++++++++++..
T Consensus       191 ---~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~el~~~~~~  250 (425)
T 2z3t_A          191 ---RD--GRGYARAEAASQEFTRYFRREVDRRGGDD------------RDDLLTLLVRARDTG---SPLSVDGIVGTCVH  250 (425)
T ss_dssp             ---C-----HHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHHHTT---CCCCHHHHHHHHHH
T ss_pred             ---CC--HHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHHHHH
Confidence               00  12345567777888888888888776532            568999999876543   37999999999999


Q ss_pred             HHhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEE
Q 048482          221 MFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVI  294 (403)
Q Consensus       221 ~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~  294 (403)
                      +++||+|||+.+++|++++|++||++|+||++|++.   ++.+    +..-..-.|.+..+.   ++++|+.|||||.|+
T Consensus       251 l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~  326 (425)
T 2z3t_A          251 LLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPAAVEE----LMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVV  326 (425)
T ss_dssp             HHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHSCSBCEEEEEESSCEEETTEEECTTCEEE
T ss_pred             HHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChHhHHHHHHH----HHHhCCcccCcceEeCCCeeECCEEECCCCEEE
Confidence            999999999999999999999999999999999742   1111    111111112111111   788999999999999


Q ss_pred             EehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCcc
Q 048482          295 VNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVE  373 (403)
Q Consensus       295 ~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~  373 (403)
                      ++.+++||||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| +++ .++.. 
T Consensus       327 ~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~-  394 (425)
T 2z3t_A          327 ALLGSANRDPARFPDPDVLDVHRAA----------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHE-  394 (425)
T ss_dssp             EEHHHHTTCTTTSSSTTSCCTTSCS----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEE-
T ss_pred             eChhhhCCCccccCCcccCCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCc-
Confidence            9999999999999999999999995          2589999999999999999999999999999999 898 65421 


Q ss_pred             CCccccccCCcccccCCCceeeeccC
Q 048482          374 ENLNMFEVNGLVVHKKLPLHPVPTLY  399 (403)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~v~~~~r  399 (403)
                       .   ......++.+...++|++.+.
T Consensus       395 -~---~~~~~~~~~~~~~lpv~~~~~  416 (425)
T 2z3t_A          395 -V---EYADDMVFHGPTRLLLDLPDA  416 (425)
T ss_dssp             -E---EECSCSSBCCEEEEEECCC--
T ss_pred             -c---ccccccccCCcceeeEEecch
Confidence             1   122345566666788877654


No 44 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=3e-50  Score=381.27  Aligned_cols=342  Identities=13%  Similarity=0.081  Sum_probs=248.5

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCccc--------eeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPAN--------ILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      +++++|+.+++||+ +...|++++......        .....+.++ +..+|+.|+++||++ ++.|+++.++.+.+.+
T Consensus        71 ~vv~~~~~v~~vl~-~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i  147 (433)
T 3ivy_A           71 WAITKLNDVKEISR-HSDVFSSYENGVIPRFKNDIAREDIEVQRFVM-LNMDAPHHTRLRKII-SRGFTPRAVGRLHDEL  147 (433)
T ss_dssp             EEECSHHHHHHHHH-CTTTEESTTTCSCCCCCTTCCHHHHHGGGGSG-GGCCTTHHHHHHHHH-GGGSCHHHHHTTHHHH
T ss_pred             EEEecHHHHHHHHc-ChhhccCCcccccccccccccccccccccCCc-cccChHHHHHHHHHH-HHhhCHHHHHHHHHHH
Confidence            78999999999996 446788776543332        111223444 455699999999998 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchH
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLI  151 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  151 (403)
                      ++.++++++.|..     ++.+|+...+ ..+++++   .|+.+.+-.   ..+......... ...|..        ..
T Consensus       148 ~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~l~G~~~~~~---~~~~~~~~~~~~-~~~p~~--------~~  210 (433)
T 3ivy_A          148 QERAQKIAAEAAA-----AGSGDFVEQVSCELPLQAIAGLLGVPQEDR---GKLFHWSNEMTG-NEDPEY--------AH  210 (433)
T ss_dssp             HHHHHHHHHHHHH-----HCEEEHHHHTTSHHHHHHHHHHHTCCHHHH---HHHHHHHTTCSC-CCCGGG--------TT
T ss_pred             HHHHHHHHHHHhh-----CCCeeHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHhc-cCCchh--------hh
Confidence            9999999999974     2468988887 8888888   234332211   222222222111 111211        11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHH
Q 048482          152 GRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTAT  231 (403)
Q Consensus       152 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~  231 (403)
                      .+..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+.
T Consensus       211 ~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~ll~AG~dTTa~  275 (433)
T 3ivy_A          211 IDPKASSAELIGYAMKMAEEKAKNP------------ADDIVTQLIQADIDG---EKLSDDEFGFFVVMLAVAGNETTRN  275 (433)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHC-------------------CHHHHHSCC--C---CCCCHHHHHHHHHHHHHHSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC------------CCcHHHHHHhhhcCC---CCCCHHHHHHHHHHHHHhhhHHHHH
Confidence            1456777889999999999887642            568999999875543   3799999999999999999999999


Q ss_pred             HHHHHHHHHhhChhhHHHHHHHHHH-HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          232 TLEWAMAELVKNPTSMKRAREEVRS-VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       232 ~l~~~l~~L~~~p~~q~~l~~Ei~~-~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      +++|++++|++||++|++|++|++. ++.+    +..-..-.+.+..+.   ++++|+.|||||.|+++.+++||||++|
T Consensus       276 ~l~~~l~~L~~~P~~~~~l~~E~~~a~i~E----~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f  351 (433)
T 3ivy_A          276 SITQGMMAFAEHPDQWELYKKVRPETAADE----IVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVF  351 (433)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHCCTTHHHH----HHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS
T ss_pred             HHHHHHHHHHHCHHHHHHHHhCcccchhHH----HhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhC
Confidence            9999999999999999999999851 1110    111112222222222   8899999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccC-CCCCCCCChHHHHHHHHHHHHHHHhcce-eecCCCCccCCccccccCCcc
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFG-AGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPLGKVEENLNMFEVNGLV  385 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG-~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~  385 (403)
                      +||++|+||||.          ..++||| +|+|.|+|++||++|++++|+.|+++|+ +++.++..     .  .....
T Consensus       352 ~dp~~F~p~R~~----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-----~--~~~~~  414 (433)
T 3ivy_A          352 QDPFTFNILRNP----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE-----R--LRSGW  414 (433)
T ss_dssp             SSTTSCCTTCCS----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE-----E--CCCSS
T ss_pred             CCcCccCCCCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc-----e--eccCc
Confidence            999999999993          2589999 9999999999999999999999999998 99865421     1  12233


Q ss_pred             cccCCCceeeeccCCC
Q 048482          386 VHKKLPLHPVPTLYSP  401 (403)
Q Consensus       386 ~~~~~~~~v~~~~r~~  401 (403)
                      ......++|++++|+.
T Consensus       415 ~~g~~~lpv~~~~R~~  430 (433)
T 3ivy_A          415 LNGIKHWQVDYTGRCP  430 (433)
T ss_dssp             BCCEEECEEESCC---
T ss_pred             ccCcceeEEEEecccc
Confidence            3444478999999875


No 45 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1.5e-49  Score=373.39  Aligned_cols=336  Identities=13%  Similarity=0.138  Sum_probs=247.3

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccc-eee--c-cccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPAN-ILL--Y-ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGE   78 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~-~~~--~-~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~   78 (403)
                      .++++||+++++||.++. .|++++...... .+.  . .+.++ +..+|+.|+++||++ .+.|+.+.++.+.+.++++
T Consensus        55 ~vvv~~~~~i~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~  131 (406)
T 1ued_A           55 VWQAHGYEVVRRILGDHE-HFTTRPQFTQSKSGAHVEAQFVGQI-STYDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSL  131 (406)
T ss_dssp             EEEECSHHHHHHHHHCCS-SEECCCCC---------CGGGTTCG-GGCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHhhCc-ccccccccccccccccccccccccc-ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHH
Confidence            468999999999993232 366655321110 111  0 23344 445799999999998 8999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCceeHHHHHHH-HHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           79 VSSLITKIRLSCFNKGSPLNLLEMLLI-ASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        79 ~~~li~~l~~~~~~~~~~vd~~~~~~~-~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++++++.|..    .++.+|+.+.+.. +++++   .|+...+-.   ..+...+......            ....++.
T Consensus       132 ~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~---~~~~~~~~~~~~~------------~~~~~~~  192 (406)
T 1ued_A          132 IDDRLDLLEA----EGPSADLQGLFADPVGAHALCELLGIPRDDQ---REFVRRIRRNADL------------SRGLKAR  192 (406)
T ss_dssp             HHHHHHHHHH----HCTTEEHHHHTHHHHHHHHHHHHHTCCHHHH---HHHHHHHHHCC---------------CCHHHH
T ss_pred             HHHHHHHHHh----cCCCeeHHHHHHHHhHHHHHHHHcCCCHHHH---HHHHHHHHHHHhc------------cCCHHHH
Confidence            9999999974    3568999987765 88888   233322111   1111111111000            0112456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++...+.+++.++|++++++.            ..|+++.|++..  +   ..++++++++++..+++||+|||+.+++
T Consensus       193 ~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~--~---~~ls~~ei~~~~~~l~~AG~dTt~~~l~  255 (406)
T 1ued_A          193 AADSAAFNRYLDNLLARQRADP------------DDGLLGMIVRDH--G---DNVTDEELKGLCTALILGGVETVAGMIG  255 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHH--G---GGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhc--C---CCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            6778889999999999988642            568999999875  2   2699999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHHH---hcCCCcCChhhccCCCc-c-eEEE--EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRSV---AKGKLNIDMKDIEKMDY-L-KCVS--VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~~---~~~~~~~~~~~~~~lp~-l-~a~i--~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      |++++|++||++|+||++|++.+   +.+    +..-..-.|. + +.+.  ++++||.|||||.|.++.+++||||++|
T Consensus       256 ~~l~~L~~~P~~~~~l~~e~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~  331 (406)
T 1ued_A          256 FGVLALLDNPGQIELLFESPEKAERVVNE----LVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT  331 (406)
T ss_dssp             HHHHHHHHSGGGTTHHHHCHHHHHHHHHH----HHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS
T ss_pred             HHHHHHHhChHHHHHHHhCHHHHHHHHHH----HHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhC
Confidence            99999999999999999997532   221    1111122222 1 2222  7889999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCccc
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVV  386 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~  386 (403)
                      +||++|+||||          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .  +....+.++
T Consensus       332 ~dp~~F~PeR~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~--~~~~~~~~~  397 (406)
T 1ued_A          332 PDPDVLDANRA----------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIE--E--VKYRSAFVD  397 (406)
T ss_dssp             SSTTSCCTTSC----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--CCBCCSSSC
T ss_pred             CChhhcCCCCC----------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcc--c--ccccccccc
Confidence            99999999998          23699999999999999999999999999999999 799864321  1  233345566


Q ss_pred             ccCCCceeee
Q 048482          387 HKKLPLHPVP  396 (403)
Q Consensus       387 ~~~~~~~v~~  396 (403)
                      .+ ..++|++
T Consensus       398 ~~-~~lpv~~  406 (406)
T 1ued_A          398 CP-DQVPVTW  406 (406)
T ss_dssp             CB-SCCEEEC
T ss_pred             cC-CeeeeeC
Confidence            67 7777763


No 46 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=1.6e-49  Score=373.59  Aligned_cols=324  Identities=14%  Similarity=0.157  Sum_probs=237.0

Q ss_pred             ccccCCHHHHHHHHHhcc-ccccCCCCCCcccee---eccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHD-IVISNRPKTTPANIL---LYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGE   78 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~-~~f~~r~~~~~~~~~---~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~   78 (403)
                      .+|+++++.+++||.++. ..+..++........   ...+...++..+|+.|+++||++ ++.|++++++.+.+.++++
T Consensus        43 ~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~  121 (404)
T 1jfb_A           43 AWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRT  121 (404)
T ss_dssp             EEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCCCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHH
T ss_pred             eEEEecHHHHHHHHcCCcccccccccCCccccccccchhcccCcccccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHH
Confidence            368899999999998652 234444433221110   01122234445699999999998 8999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           79 VSSLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        79 ~~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++++++.|.... .+++.+|+...+...+.++    .|+...+-.+.+......+.        .+       ....++.
T Consensus       122 ~~~l~~~l~~~~-~~~~~~d~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~--------~~-------~~~~~~~  185 (404)
T 1jfb_A          122 VDDLLEQMKQKG-CANGPVDLVKEFALPVPSYIIYTLLGVPFNDLEYLTQQNAIRT--------NG-------SSTAREA  185 (404)
T ss_dssp             HHHHHHHHHHHC-STTSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHH--------CT-------TSCHHHH
T ss_pred             HHHHHHHHHhcC-CCCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHh--------cc-------CcchHHH
Confidence            999999998752 2356799988877665554    23322111111222211110        00       1123456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||+++++
T Consensus       186 ~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~eTt~~~l~  250 (404)
T 1jfb_A          186 SAANQELLDYLAILVEQRLVEP------------KDDIISKLCTEQVKP---GNIDKSDAVQIAFLLLVAGNATMVNMIA  250 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCcHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhhhhHHHHHH
Confidence            6777889999999999988652            568999999765433   3799999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHH---HHHhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEV---RSVAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei---~~~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      |++++|++||++|+||+++.   +.++.+    +..-..-.| .+..+.   ++++|+.|||||.|+++.+++||||++|
T Consensus       251 ~~l~~L~~~P~~~~~l~~~~~yl~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~  326 (404)
T 1jfb_A          251 LGVATLAQHPDQLAQLKANPSLAPQFVEE----LCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF  326 (404)
T ss_dssp             HHHHHHHHSHHHHHHHHHCGGGHHHHHHH----HHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS
T ss_pred             HHHHHHHcCHHHHHHHHhChHhHHHHHHH----HHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhC
Confidence            99999999999999999842   111111    001111112 111111   7889999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCC
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLG  370 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~  370 (403)
                      +||++|+||||++.        ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+
T Consensus       327 ~dP~~F~PeRf~~~--------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          327 ENPDEFNMNRKWPP--------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             SSTTSCCTTCCCCS--------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             CChhhcCCCCCCCC--------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence            99999999999753        2499999999999999999999999999999999 7998643


No 47 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.9e-49  Score=373.09  Aligned_cols=344  Identities=19%  Similarity=0.259  Sum_probs=249.9

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCC--CCcc-c------eeec-cccceecCCCchhhHHHHhHHHHhhchHHHhhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPK--TTPA-N------ILLY-ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQ   72 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~--~~~~-~------~~~~-~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~   72 (403)
                      .++++||+++++||.++  .|++++.  +... .      .... .+.+ ++..+|+.|+++||++ .+.|++..++.+.
T Consensus        40 ~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~  115 (408)
T 1odo_A           40 AWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAVEN-MFTAYGPNHRKLRRLV-APAFSARRVDAMR  115 (408)
T ss_dssp             EEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHCCS-GGGCCHHHHHHHHHTT-GGGGSHHHHHHHH
T ss_pred             EEEECCHHHHHHHHcCC--Cccccccccccccccccccccccccccccc-ccccCChHHHHHHHHh-hhhcCHHHHHHHH
Confidence            46899999999999754  2444331  1100 0      0000 1234 4555699999999998 8999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeHHHHHH-HHHhhc---cCCchhhHHHHHHHHH-HHhcccccchhhhhhhhhhhh
Q 048482           73 HVRDGEVSSLITKIRLSCFNKGSPLNLLEMLL-IASKEE---NTGQSNKFGELLRRLE-EQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        73 ~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~-~~~~~v---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +.++++++++++.|.+.  .+++.+|+...+. .+++++   .|+...+-.+.+.... .++..                
T Consensus       116 ~~i~~~~~~l~~~l~~~--~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~----------------  177 (408)
T 1odo_A          116 PAVEAMVTGLVDRLAEL--PAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFRALVDGVFDT----------------  177 (408)
T ss_dssp             HHHHHHHHHHHHHHHHS--CTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCT----------------
T ss_pred             HHHHHHHHHHHHHHHhh--cCCCCcchHHHHhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHhcc----------------
Confidence            99999999999999864  2367899988776 488887   2332221111111111 11110                


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ....++..++...+.+++.++|++++++.            .+|+++.|++...++..+..++++++++++..+++||+|
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~d  245 (408)
T 1odo_A          178 TLDQAEAQANTARLYEVLDQLIAAKRATP------------GDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYE  245 (408)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------CCCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHH
Confidence            01124566777888999999999887642            568999999876542112369999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHH---HHHhcCCCcCChhhccCCCc-ceEEE---Eeec-ccccCCCcEEEEehhh
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEV---RSVAKGKLNIDMKDIEKMDY-LKCVS---VRWR-DYNILAKTRVIVNAWA  299 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei---~~~~~~~~~~~~~~~~~lp~-l~a~i---~~~~-g~~ip~Gt~v~~~~~~  299 (403)
                      ||+.+++|++++|++||++|+||++|+   +.++.+.    ..-..-.|. +.-+.   ++++ ||.|||||.|+++.++
T Consensus       246 Tt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~----lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~  321 (408)
T 1odo_A          246 TTVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEET----LRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAA  321 (408)
T ss_dssp             THHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHH----HHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHH
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHH----HhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhh
Confidence            999999999999999999999999984   3333211    111111221 11111   7888 9999999999999999


Q ss_pred             hhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccc
Q 048482          300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNM  378 (403)
Q Consensus       300 ~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~  378 (403)
                      +||||++|+||++|+|||+          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .  +
T Consensus       322 ~~rdp~~~~dp~~F~PeR~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~--~  387 (408)
T 1odo_A          322 ANRHPDWHEDADTFDATRT----------VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAE--E--L  387 (408)
T ss_dssp             HTTCTTTSTTTTSCCTTCS----------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTS--C--C
T ss_pred             hcCChhhcCCccccCCCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCcc--c--c
Confidence            9999999999999999994          24699999999999999999999999999999999 799864321  1  2


Q ss_pred             cccCCcccccCCCceeeecc
Q 048482          379 FEVNGLVVHKKLPLHPVPTL  398 (403)
Q Consensus       379 ~~~~~~~~~~~~~~~v~~~~  398 (403)
                      ....+.++.+..+++|+++|
T Consensus       388 ~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          388 PPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             CBCSCSSBCCBSCCEEECC-
T ss_pred             ccccCccccCcccceEEecC
Confidence            33345667777788988865


No 48 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=6.3e-50  Score=377.93  Aligned_cols=344  Identities=16%  Similarity=0.166  Sum_probs=251.7

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCCcccee--------eccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTTPANIL--------LYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~--------~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      +++++|+.+++||++. ..+++++........        ...+.++++ .+|+.|+++||++ ++.|+++.++.+.+.+
T Consensus        52 ~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i  128 (418)
T 3r9b_A           52 AVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLF-LDPPDHTRLRGLV-SKAFAPRVIKRLEPEI  128 (418)
T ss_dssp             EEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGG-CCTTHHHHHHHHH-HGGGSHHHHGGGHHHH
T ss_pred             EEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhh-cCCchHHHHHHHh-hhhhCHHHHHHHHHHH
Confidence            7899999999999753 445555432211111        112344444 4599999999998 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHHH-HHHHHhhc---cCC----chhhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLEM-LLIASKEE---NTG----QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~~-~~~~~~~v---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +++++++++ |.     .++.+|+... ...+++++   .|+    ..+.+......+...+..      ++.+.++  .
T Consensus       129 ~~~~~~ll~-l~-----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~  194 (418)
T 3r9b_A          129 TALVDQLLD-AV-----DGPEFNLIDNLAYPLPVAVICRLLGVPIEDEPKFSRASALLAAALDP------FLALTGE--T  194 (418)
T ss_dssp             HHHHHHHHH-TC-----CSSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSC------HHHHHSS--C
T ss_pred             HHHHHHHHh-hh-----ccCCeehHHHHhCcCCHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCc------ccccccc--C
Confidence            999999999 74     3448887544 45777777   222    222333333332222111      1111111  1


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ....++..++.+.+.+++.++|++++++.            .+|+++.|++...++.   .++++++++++..+++||+|
T Consensus       195 ~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~~---~ls~~ei~~~~~~l~~AG~e  259 (418)
T 3r9b_A          195 SDLFDEQMKAGMWLRDYLRALIDERRRTP------------GEDLMSGLVAVEESGD---QLTEDEIIATCNLLLIAGHE  259 (418)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHTTTSC------------CSSHHHHHHHHHHHSS---SCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CccHHHHHHHhhhccC---CCCHHHHHHHHHHHHHHhHH
Confidence            24456778888999999999999887642            5799999998865543   69999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHHH---hcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhh
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRSV---AKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQ  301 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~---~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~  301 (403)
                      ||+.+++|++++|++||++|+||++|++.+   +.+    +..-..-.|.+..+.   ++++|+.|||||.|+++.+++|
T Consensus       260 TTa~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~  335 (418)
T 3r9b_A          260 TTVNLIANAALAMLRTPGQWAALAADGSRASAVIEE----TMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAH  335 (418)
T ss_dssp             THHHHHHHHHHHHHHSTTHHHHHHHCGGGHHHHHHH----HHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHT
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHhChHhHHHHHHH----HHHhCCccccceeEeCCCeEECCEEECCCCEEEEChHHhc
Confidence            999999999999999999999999997532   221    111111122222222   7899999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccc
Q 048482          302 RDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFE  380 (403)
Q Consensus       302 rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~  380 (403)
                      |||++|+||++|+|||.          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++       ...
T Consensus       336 rdp~~~~dp~~F~p~R~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-------~~~  398 (418)
T 3r9b_A          336 RDPTIVGAPDRFDPDRA----------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE-------PEY  398 (418)
T ss_dssp             TCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-------CEE
T ss_pred             CCcccCCCcCcCCCCCC----------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC-------Ccc
Confidence            99999999999999992          24589999999999999999999999999999999 8998654       222


Q ss_pred             cCCcccccCCCceeeeccCC
Q 048482          381 VNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       381 ~~~~~~~~~~~~~v~~~~r~  400 (403)
                      ..+.++.+...++|++.+|.
T Consensus       399 ~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          399 KRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             CSCSSBCCEEECEEEC----
T ss_pred             ccCCcccCcceeEEEecCCC
Confidence            34566777778999998873


No 49 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=5.5e-49  Score=372.41  Aligned_cols=323  Identities=14%  Similarity=0.122  Sum_probs=245.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCC--C-ccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKT--T-PANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~--~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~   79 (403)
                      .++++||+.+++||.++ ..|++++..  . ....+...+.+++++ +|+.|+.+||++ .+.|+++.++.+.+.+++++
T Consensus        76 ~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~-dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~  152 (435)
T 2wm5_A           76 HWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL-DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRA  152 (435)
T ss_dssp             EEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHH
T ss_pred             eEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHH
Confidence            47899999999999864 578887632  1 111111113555555 699999999998 89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCC----chhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchH
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTG----QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLI  151 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  151 (403)
                      +++++.|...  +++..+|+...+ ..+++++   .|+    ..+.+.+....+....        .|.+      ....
T Consensus       153 ~~ll~~l~~~--~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~--------~p~~------~~~~  216 (435)
T 2wm5_A          153 HRLVSSMIAN--NPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFG--------DPDL------ATDF  216 (435)
T ss_dssp             HHHHHHHHHH--CTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHTT--------CTTS------CCCH
T ss_pred             HHHHHHHHhc--CCCCcEehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccC--------Ccch------hhhH
Confidence            9999999875  245689998765 6788887   232    2223333333322211        1211      1223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHH
Q 048482          152 GRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTAT  231 (403)
Q Consensus       152 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~  231 (403)
                      ++..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++.+..+++||+|||+.
T Consensus       217 ~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~dTt~~  281 (435)
T 2wm5_A          217 DEFMQVSADIGAYATALAEDRRVNH------------HDDLTSSLVEAEVDG---ERLSSREIASFFILLVVAGNETTRN  281 (435)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC------------CCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhhHHHHH
Confidence            5677788899999999999988742            568999999875432   3699999999999999999999999


Q ss_pred             HHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCC
Q 048482          232 TLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWD  308 (403)
Q Consensus       232 ~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~  308 (403)
                      +++|++++|++||++|+||++|++.....--..+..-..-.|.+..+.   ++++|+.|||||.|+++.+++||||++|+
T Consensus       282 ~l~~~l~~L~~~P~~~~~l~~E~~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~  361 (435)
T 2wm5_A          282 AITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFA  361 (435)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHHHHHHHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSS
T ss_pred             HHHHHHHHHHhCCHHHHHHHhChHhHHHHHHHHHHhhcCcccCcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCc
Confidence            999999999999999999999987322110001111112222222222   78899999999999999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCccccccCC-CCCCCCChHHHHHHHHHHHHHHHhcce-eecCC
Q 048482          309 RPEDFLSDKFLNSLVDCKSQDFEFISFGA-GRRGYLGTSFALVEVEYVIANLLYWFD-WNLPL  369 (403)
Q Consensus       309 dp~~F~PeRf~~~~~~~~~~~~~~~~FG~-G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~  369 (403)
                      ||++|+|||+          +..++|||+ |+|.|+|++||++|++++|+.|+++|+ +++.+
T Consensus       362 dP~~F~PeR~----------~~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~  414 (435)
T 2wm5_A          362 DPWTFDLARN----------PNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATE  414 (435)
T ss_dssp             STTCCCTTCC----------SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred             CCCccCCCCC----------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence            9999999994          135899999 999999999999999999999999997 99865


No 50 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=5e-50  Score=387.43  Aligned_cols=370  Identities=14%  Similarity=0.109  Sum_probs=251.4

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCC-ccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTT-PANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      +|++||+++++||.++...|+.++... .....  .|.+.+. .+|+.|   |+++ .+.|+.+.++.+.+.+.+++...
T Consensus        65 vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~--~g~~~~~-~~~~~~---rr~~-~~~~~~~~l~~~~~~~~~~~~~~  137 (498)
T 3b6h_A           65 TVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERI--FDVQLPH-YSPSDE---KARM-KLTLLHRELQALTEAMYTNLHAV  137 (498)
T ss_dssp             EEECCGGGHHHHHTCCTTTEECCHHHHHHHHHT--SCCCCTT-CCHHHH---HHHH-HTTSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCHHHHHHHHhCccccCCchhhHHHHHHHH--cCCCccc-cCHHHH---HHHH-HHhhchHhHHHHHHHHHHHHHHH
Confidence            567999999999976553243332211 11111  1344443 447776   4555 67888888888888887777777


Q ss_pred             HHHHHHhccCCCCceeHHHHHHHHHhhcc----CCc----hhh-----HHHHHHHHHHHhcccccchhhhhhhhhhhhh-
Q 048482           83 ITKIRLSCFNKGSPLNLLEMLLIASKEEN----TGQ----SNK-----FGELLRRLEEQFAAFCVGDTFLFLGCLDVLS-  148 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~~~~~~~v~----~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-  148 (403)
                      ++.+..........+++...+..+++++.    |+.    .+.     +......+...+.  .+...+|++.+. +++ 
T Consensus       138 l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~-~~~~  214 (498)
T 3b6h_A          138 LLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFR--QLDRLLPKLARG-SLSV  214 (498)
T ss_dssp             HHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHT-CCCH
T ss_pred             HhhcccccCCCcceecHHHHHHHHHHHHHHHhhcCcccccccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHH-hcCc
Confidence            77654321112345788888888888872    332    111     2222333332221  123344533221 111 


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccc
Q 048482          149 GLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDT  228 (403)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~t  228 (403)
                      ...++..++.+.+.+.   +++++.++.     ..     ..|+++.+++...+.+   .++++++. .++.+++||++|
T Consensus       215 ~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~-----~~d~l~~ll~~~~~~~---~~~~~~~~-~~~~~l~ag~~t  277 (498)
T 3b6h_A          215 GDKDHMCSVKSRLWKL---LSPARLARR-----AH-----RSKWLESYLLHLEEMG---VSEEMQAR-ALVLQLWATQGN  277 (498)
T ss_dssp             HHHHHHHHHHHHHHHH---TCHHHHTTC-----BS-----CCHHHHHHHHHHHHTT---CCHHHHHH-HHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHHH---HHHHHHhcc-----cc-----HHHHHHHHHHHHHhCC---CCHHHHHH-HHHHHHHHhhhc
Confidence            1122333333333332   223333221     12     5799999998765542   56777877 888888999999


Q ss_pred             hHHHHHHHHHHHhhChhhHHHHHHHHHHHhcCCC-------cCChhhccCCCcceEEE-------------------Eee
Q 048482          229 TATTLEWAMAELVKNPTSMKRAREEVRSVAKGKL-------NIDMKDIEKMDYLKCVS-------------------VRW  282 (403)
Q Consensus       229 t~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~-------~~~~~~~~~lp~l~a~i-------------------~~~  282 (403)
                      |+.+++|++++|++||++|+||++||+++++...       .++++++.+||||+|||                   +.+
T Consensus       278 t~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~R~~~~d~~~  357 (498)
T 3b6h_A          278 MGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAAPFITREVVVDLAM  357 (498)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBCBCEEEEECSCEEE
T ss_pred             hHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCCCcceeeecCCeee
Confidence            9999999999999999999999999999988643       25899999999999999                   555


Q ss_pred             -----cccccCCCcEEEEehhh-hhcCCCCCCCCCCCCCccccccccCC--------CCCCccccccCCCCCCCCChHHH
Q 048482          283 -----RDYNILAKTRVIVNAWA-IQRDPQGWDRPEDFLSDKFLNSLVDC--------KSQDFEFISFGAGRRGYLGTSFA  348 (403)
Q Consensus       283 -----~g~~ip~Gt~v~~~~~~-~~rd~~~~~dp~~F~PeRf~~~~~~~--------~~~~~~~~~FG~G~r~C~G~~~A  348 (403)
                           +||.|||||.|+++.++ +||||++|+||++|+||||++.+...        ...+..|+|||+|+|.|||++||
T Consensus       358 ~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  437 (498)
T 3b6h_A          358 PMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYA  437 (498)
T ss_dssp             ECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHH
T ss_pred             ecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHH
Confidence                 68999999999999999 99999999999999999999754221        12356899999999999999999


Q ss_pred             HHHHHHHHHHHHhcceeecCCCCc-cCCccccccCCcccccCCCceeeeccCC
Q 048482          349 LVEVEYVIANLLYWFDWNLPLGKV-EENLNMFEVNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       349 ~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~r~  400 (403)
                      .+|++++|+.|+++|+|++.++.. ....+.......+.+|+.+++|++++|-
T Consensus       438 ~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  490 (498)
T 3b6h_A          438 VNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIRP  490 (498)
T ss_dssp             HHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCccEEEEecc
Confidence            999999999999999999876531 1111211122334577778888888774


No 51 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=1.2e-49  Score=373.20  Aligned_cols=315  Identities=14%  Similarity=0.151  Sum_probs=237.0

Q ss_pred             CccccCCHHHHHHHHHhccccccCCCCC------Ccccee--eccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhh
Q 048482            2 LKNYHMHDFSTCEMFKTHDIVISNRPKT------TPANIL--LYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQH   73 (403)
Q Consensus         2 ~~~~l~dp~~~k~vl~~~~~~f~~r~~~------~~~~~~--~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~   73 (403)
                      ..++++||+++++||.++ ..|++++..      ......  ...+.++++ .+|+.|+++||++ .+.|+++.++.+.+
T Consensus        41 ~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~  117 (398)
T 1lfk_A           41 THWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMD-YDPPEHTRLRRKL-TPGFTLRKMQRMAP  117 (398)
T ss_dssp             CEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGG-CCTTHHHHHHHHH-GGGGCHHHHHHHHH
T ss_pred             ceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCccc-cCCHHHHHHHHHH-HhhhCHHHHHHHHH
Confidence            358999999999999433 357777641      111111  112345554 4699999999998 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeHHHHHHH-HHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhc
Q 048482           74 VRDGEVSSLITKIRLSCFNKGSPLNLLEMLLI-ASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSG  149 (403)
Q Consensus        74 ~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~~-~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  149 (403)
                      .++++++++++.|..    .++.+|+.+.+.. ++.++   .|+...+-.+.+......+.        .       .+.
T Consensus       118 ~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~--------~-------~~~  178 (398)
T 1lfk_A          118 YIEQIVNDRLDEMER----AGSPADLIAFVADKVPGAVLCELVGVPRDDRDMFMKLCHGHL--------D-------ASL  178 (398)
T ss_dssp             HHHHHHHHHHHHHHH----HCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHTT--------C-------TTS
T ss_pred             HHHHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH--------h-------ccc
Confidence            999999999999974    3567999988776 66666   23321110111111111100        0       012


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccch
Q 048482          150 LIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTT  229 (403)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt  229 (403)
                      ..++..++...+.+++.+.|+++++..            .+|+++.|++.. +    ..++++++++++..+++||+|||
T Consensus       179 ~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~-~----~~l~~~el~~~~~~l~~AG~dTt  241 (398)
T 1lfk_A          179 SQKRRAALGDKFSRYLLAMIARERKEP------------GEGMIGAVVAEY-G----DDATDEELRGFCVQVMLAGDDNI  241 (398)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHH-G----GGSCHHHHHHHHHHHHHHTSHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhc-C----CCCCHHHHHHHHHHHHHHhccHH
Confidence            235567788889999999999988752            568999999876 2    27999999999999999999999


Q ss_pred             HHHHHHHHHHHhhChhhHHHHHHHHHHH---hcCCCcCChhhccCCC-cc-eEEE--EeecccccCCCcEEEEehhhhhc
Q 048482          230 ATTLEWAMAELVKNPTSMKRAREEVRSV---AKGKLNIDMKDIEKMD-YL-KCVS--VRWRDYNILAKTRVIVNAWAIQR  302 (403)
Q Consensus       230 ~~~l~~~l~~L~~~p~~q~~l~~Ei~~~---~~~~~~~~~~~~~~lp-~l-~a~i--~~~~g~~ip~Gt~v~~~~~~~~r  302 (403)
                      +.+++|++++|++||++|+||++|++.+   +.+    +..-..-.| .+ +.+.  ++++||.|||||.|+++.+++||
T Consensus       242 ~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r  317 (398)
T 1lfk_A          242 SGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDE----LIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANR  317 (398)
T ss_dssp             HHHHHHHHHHHHHSGGGGGGGSSCHHHHHHHHHH----HHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTT
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCC
Confidence            9999999999999999999999997532   211    111111122 11 1122  78899999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCC
Q 048482          303 DPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPL  369 (403)
Q Consensus       303 d~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~  369 (403)
                      ||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..
T Consensus       318 dp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  375 (398)
T 1lfk_A          318 DPALAPDVDRLDVTREP----------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLAD  375 (398)
T ss_dssp             CTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             CchhcCCccccCCCCCC----------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence            99999999999999983          3589999999999999999999999999999999 799864


No 52 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=8.3e-50  Score=375.57  Aligned_cols=336  Identities=15%  Similarity=0.174  Sum_probs=247.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccce---eec----cccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANI---LLY----ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~---~~~----~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      .++++||+++++||.++  .|++++....+..   +..    .+.+ ++..+|+.|+++||++ .+.|+++.++.+.+.+
T Consensus        50 ~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i  125 (408)
T 3abb_A           50 AWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFP-LIGVDDPVHARQRRML-IPSFGVKRMNAIRPRL  125 (408)
T ss_dssp             EEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCT-TTTCCTTHHHHHHHHH-GGGGCHHHHHHHHHHH
T ss_pred             EEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccc-cccCCchHHHHHHHHh-hhhcCHHHHHHHHHHH
Confidence            46899999999999754  3555443111110   110    1234 4455799999999998 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHHHHH-HHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLEMLL-IASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~~~~-~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +++++++++.|..    .++.+|+...+. .+++++   .|+..    +.+......+.   .   .    +        
T Consensus       126 ~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~---~---~----~--------  183 (408)
T 3abb_A          126 QSLVDRLLDDMLA----KGPGADLVSAFALPVPSVAICELLGVPYGDHDFFEECSRNFV---G---A----A--------  183 (408)
T ss_dssp             HHHHHHHHHHHHH----TCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHC---------------------
T ss_pred             HHHHHHHHHHHHh----cCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---c---c----c--------
Confidence            9999999999984    456899988775 477777   23321    22222222111   0   0    0        


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                       .. ++..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|
T Consensus       184 -~~-~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~d  246 (408)
T 3abb_A          184 -TS-AEADAAFGELYTYLHGLVGRKQAEP------------EDGLLDELIARQLEE---GDLDHDEVVMIALVLLVAGHE  246 (408)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHHTS---SSCCHHHHHHHHHHHHHHHHH
T ss_pred             -ch-HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhcccCC---CCCCHHHHHHHHHHHHHHHHH
Confidence             01 2334566778888999999887652            468999999876543   379999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhh
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQ  301 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~  301 (403)
                      ||+.+++|++++|++||++|+||++|++.   ++.+    +..-..-.|.+.-+.   ++++||.|||||.|+++.+++|
T Consensus       247 Tt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~  322 (408)
T 3abb_A          247 TTVNAIALGALTLIQHPEQIDVLLRDPGAVSGVVEE----LLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMN  322 (408)
T ss_dssp             HHHHHHHHHHHHHHTCGGGGGGGGSCHHHHHHHHHH----HHHHHCSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHhCHHhHHHHHHH----HHHhcCcccccceEeCCCeEECCEEECCCCEEEeChHHhc
Confidence            99999999999999999999999998643   2211    111111222222222   7889999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccc
Q 048482          302 RDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFE  380 (403)
Q Consensus       302 rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~  380 (403)
                      |||++|+||++|+||||          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .  ...
T Consensus       323 rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~--~--~~~  388 (408)
T 3abb_A          323 RDAKAYENPDIFDARRN----------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLD--E--VPI  388 (408)
T ss_dssp             TCTTTSSSTTSCCTTSC----------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--SCB
T ss_pred             CCcccCCCcccCCCCCC----------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCcc--c--ccc
Confidence            99999999999999996          23689999999999999999999999999999999 798864321  1  222


Q ss_pred             cCCcccccCCCceeeeccC
Q 048482          381 VNGLVVHKKLPLHPVPTLY  399 (403)
Q Consensus       381 ~~~~~~~~~~~~~v~~~~r  399 (403)
                      ..+.+..+...++|++++|
T Consensus       389 ~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          389 KAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             CCTTSCCSBSCCEEECSCC
T ss_pred             ccCcccCCcceeEEEeCCC
Confidence            2345566777899998877


No 53 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=2.6e-49  Score=373.67  Aligned_cols=343  Identities=14%  Similarity=0.116  Sum_probs=249.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCC---CCccc-----e-eeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPK---TTPAN-----I-LLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQH   73 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~---~~~~~-----~-~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~   73 (403)
                      .+++++++.+++||.+. ..|++++.   .....     . ... +.+.++..+|+.|+++|+++ ++.|+++.++.+.+
T Consensus        64 ~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~  140 (426)
T 3rwl_A           64 YWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGL-DLPNFIAMDRPRHDEQRKAV-SPIVAPANLAALEG  140 (426)
T ss_dssp             EEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------C-CCCCGGGCCTTHHHHHHHHH-GGGGCHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcCC-cccccccccCCCCccccccccccccc-ccCcccccCchHHHHHHHHh-hhhhCHHHHHHHHH
Confidence            58999999999999754 56776541   11111     1 111 22335555699999999998 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhc
Q 048482           74 VRDGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSG  149 (403)
Q Consensus        74 ~i~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  149 (403)
                      .+++.++++++.|.     .++.+|+...+ ..++.++   .|+...+-.+.+..+...+.....    +  .    ...
T Consensus       141 ~i~~~~~~ll~~l~-----~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~----~--~----~~~  205 (426)
T 3rwl_A          141 TIRERVSKTLDGLP-----VGEEFDWVDRVSIEITTQMLATLFDFPFEERRKLTRWSDVTTAAPG----G--G----VVE  205 (426)
T ss_dssp             HHHHHHHHHHHTSC-----SSSCEEHHHHTHHHHHHHHHHHHHTCCGGGTHHHHHHHHHHTCCTT----S--S----SCS
T ss_pred             HHHHHHHHHHHHhh-----cCCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccC----c--c----ccc
Confidence            99999999999983     56689976665 5677777   233222111222222222221110    0  0    012


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccch
Q 048482          150 LIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTT  229 (403)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt  229 (403)
                      ..++..++...+.+++.++|++++..      ..     .+|+++.|++...++    +++++++++++..+++||+|||
T Consensus       206 ~~~~~~~~~~~~~~~~~~~i~~r~~~------~~-----~~dll~~ll~~~~~~----~ls~~el~~~~~~l~~AG~eTT  270 (426)
T 3rwl_A          206 SWDQRKTELLECAAYFQVLWNERVNK------DP-----GNDLISMLAHSPATR----NMTPEEYLGNVLLLIVGGNDTT  270 (426)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTS------CC-----CSSHHHHHHHCGGGG----GCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhc------CC-----CCCHHHHHHhcccCC----CCCHHHHHHHHHHHHHHHHHHH
Confidence            34456677788999999999988422      12     679999999876543    6899999999999999999999


Q ss_pred             HHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcC
Q 048482          230 ATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRD  303 (403)
Q Consensus       230 ~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd  303 (403)
                      +.+++|++++|++||++|++|++|++.   ++.+    +..-..-.+.+..+.   ++++|+.||||+.|+++.+++|||
T Consensus       271 a~~l~~~l~~L~~~P~~~~~lr~E~~~l~a~i~E----~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rD  346 (426)
T 3rwl_A          271 RNSMTGGVLALHKNPDQFAKLKANPALVETMVPE----IIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRD  346 (426)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHhChHhHHHHHHH----HHHhcCccccCceecCCCeEECCEEECCCCEEEechHHhCCC
Confidence            999999999999999999999999532   2211    111111222222222   889999999999999999999999


Q ss_pred             CCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccC
Q 048482          304 PQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVN  382 (403)
Q Consensus       304 ~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~  382 (403)
                      |++|+||++|+|+||..         ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++.       ....
T Consensus       347 p~~f~dP~~F~p~R~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-------~~~~  410 (426)
T 3rwl_A          347 DEVIDRPEEFIIDRPRP---------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP-------ERVR  410 (426)
T ss_dssp             TTTSSSTTSCCTTCSCT---------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC-------EECC
T ss_pred             ccccCCcCccCCCCCCC---------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC-------cccc
Confidence            99999999999999943         3699999999999999999999999999999999 99986542       1122


Q ss_pred             CcccccCCCceeeecc
Q 048482          383 GLVVHKKLPLHPVPTL  398 (403)
Q Consensus       383 ~~~~~~~~~~~v~~~~  398 (403)
                      +........++|+++|
T Consensus       411 ~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          411 SNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             CSSBCCEEECEEEEEC
T ss_pred             cccccCcceeeEEEeC
Confidence            3344444567777654


No 54 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=3.3e-51  Score=393.41  Aligned_cols=366  Identities=13%  Similarity=0.103  Sum_probs=242.1

Q ss_pred             cccCCHHHHHHHHHhccccccCCCCCC-ccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPKTT-PANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      +|++||+++++||.++. .|+.++... .....  .|.+.+. .+|+.|   |+++ .+.|+.+.++.+.+.+.+++..+
T Consensus        65 vvv~~~~~~~~il~~~~-~~~~~~~~~~~~~~~--~g~~~~~-~~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~  136 (475)
T 3b98_A           65 TVLLDSNCYDAVLSDVA-SLDQTSYAQVLMKRI--FNMILPS-HNPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLL  136 (475)
T ss_dssp             EEECCTTTHHHHHTCTT-TEESHHHHHHHHHHT--TCCCCTT-CCHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCHHHHHHHHcCcc-cCCchHHHHHHHHHH--hCCCCCC-CChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHH
Confidence            57899999999997553 243222110 11111  1344443 447665   5776 78999999999999999999998


Q ss_pred             HHHHHHhc-cCCCCceeHHHHHHHHHhhc----cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhh-chHHHHHH
Q 048482           83 ITKIRLSC-FNKGSPLNLLEMLLIASKEE----NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLS-GLIGRLNA  156 (403)
Q Consensus        83 i~~l~~~~-~~~~~~vd~~~~~~~~~~~v----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~  156 (403)
                      ++.+.... ......+++...+..+++++    .|+...+..+....+...+..  +...+|++.+. +++ ...++..+
T Consensus       137 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~-~~~~~~~~~~~~  213 (475)
T 3b98_A          137 MTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNSAALTQIYEEFRR--FDKLLPKLART-TVNKEEKQIASA  213 (475)
T ss_dssp             SSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHH--HHHHHHHHHTT-CCCHHHHHHHHH
T ss_pred             HhhcccccCCCCceeehHHHHHHHHHHHHhhhheeCCccccchhcHHHHHHHHH--HHhhhHHHHHH-hcChhhhHHHHH
Confidence            88765421 01223578888888888887    233222111222222222111  12334433221 111 11122222


Q ss_pred             HHHHHHHHHHHHHH-HHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHH
Q 048482          157 TARAIDALLDRVIE-EHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEW  235 (403)
Q Consensus       157 ~~~~l~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~  235 (403)
                      +.+.+    .+.+. ++.++     ...     ..|+++.+++...+++   .++++++. .++.+++||+|||+.+++|
T Consensus       214 ~~~~~----~~~~~~~~~~~-----~~~-----~~d~l~~ll~~~~~~~---~~~~~~i~-~~~~~l~ag~~TTa~~l~~  275 (475)
T 3b98_A          214 AREKL----WKWLTPSGLDR-----KPR-----EQSWLGSYVKQLQDEG---IDAEMQRR-AMLLQLWVTQGNAGPAAFW  275 (475)
T ss_dssp             HHHHH----HHHHSCTTSCC-----CCC-----TTSHHHHHHHHHHHTT---CCHHHHHH-HHHHHHHHHHSSHHHHHHH
T ss_pred             HHHHH----HHHHHHHHhhc-----ccc-----ccHHHHHHHHHHHHcC---CCHHHHHH-HHHHHHHHccccHHHHHHH
Confidence            22222    22221 11111     122     6799999998765543   57888888 8999999999999999999


Q ss_pred             HHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE-------------------Eee-----cccccCCCc
Q 048482          236 AMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS-------------------VRW-----RDYNILAKT  291 (403)
Q Consensus       236 ~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i-------------------~~~-----~g~~ip~Gt  291 (403)
                      ++++|++||++|++|++|++  .+ ...++++++.+||||+|||                   +++     +||.|||||
T Consensus       276 ~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~R~~~~d~~l~~~~g~g~~Ip~Gt  352 (475)
T 3b98_A          276 VMGYLLTHPEALRAVREEIQ--GG-KHLRLEERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGD  352 (475)
T ss_dssp             HHHHHHTCHHHHHHHHHHHC---------------CCHHHHHHHHHHHHHHEEECEEEEECSCEEEECTTSCEEEECTTC
T ss_pred             HHHHHHcCHHHHHHHHHHHh--cC-CCCCCHHHHhcCHHHHHHHHHHHhcCCccceeEEecCCeEeecCCCCeEEECCCC
Confidence            99999999999999999998  22 2346899999999999999                   566     889999999


Q ss_pred             EEEEehhh-hhcCCCCCCCCCCCCCccccccccCC--------CCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhc
Q 048482          292 RVIVNAWA-IQRDPQGWDRPEDFLSDKFLNSLVDC--------KSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYW  362 (403)
Q Consensus       292 ~v~~~~~~-~~rd~~~~~dp~~F~PeRf~~~~~~~--------~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~  362 (403)
                      .|+++.++ +||||++|+||++|+||||++.+...        ...+..|+|||+|+|.|+|++||++|++++|+.|+++
T Consensus       353 ~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~  432 (475)
T 3b98_A          353 RLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTR  432 (475)
T ss_dssp             EEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999 99999999999999999999654221        1235689999999999999999999999999999999


Q ss_pred             ceeecCCCCc-cCCccccccCCcccccCCCceeeeccCCC
Q 048482          363 FDWNLPLGKV-EENLNMFEVNGLVVHKKLPLHPVPTLYSP  401 (403)
Q Consensus       363 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  401 (403)
                      |+|++.++.. .+..+.......+..|+.+++|++++|+.
T Consensus       433 f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R~~  472 (475)
T 3b98_A          433 FDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRFH  472 (475)
T ss_dssp             EEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC--
T ss_pred             EEEEECCCCCCCCCCCcccccccccCCCCCceEEEEeccc
Confidence            9999876532 11112111222356788899999999975


No 55 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=4.9e-50  Score=377.31  Aligned_cols=335  Identities=15%  Similarity=0.100  Sum_probs=253.8

Q ss_pred             ccccCCHHHHHHHHHhccccccCCC-CCCccceeeccccc-eecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRP-KTTPANILLYECQG-IGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVS   80 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~   80 (403)
                      .++++||+++++||. +...|++++ ......  ...+.+ ++ ..+|+.|+.+||++ .+.|++..++.+.+.++++++
T Consensus        63 ~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~--~~~~~~~l~-~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~  137 (415)
T 2zwu_A           63 HWIATRGQLIREAYE-DYRHFSSECPFIPREA--GEAYDFIPT-SMDPPEQRQFRALA-NQVVGMPVVDKLENRIQELAC  137 (415)
T ss_dssp             EEEECSHHHHHHHHH-CTTTEETTSCSSSHHH--HHHCCCTTT-TCCTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHH
T ss_pred             eEEEcCHHHHHHHHc-CccccCCCcccCCCCc--cccccccCc-cCCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHH
Confidence            478999999999997 445788876 222111  111344 44 45699999999998 899999999999999999999


Q ss_pred             HHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCc----hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHH
Q 048482           81 SLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQ----SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIG  152 (403)
Q Consensus        81 ~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  152 (403)
                      .+++.|...     +.+|+...+ ..+++++   .|+.    .+.+......+   +..     ..|         .   
T Consensus       138 ~l~~~l~~~-----~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~---~~~-----~~P---------~---  192 (415)
T 2zwu_A          138 SLIESLRPQ-----GQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQM---TRP-----DGS---------M---  192 (415)
T ss_dssp             HHHHHHGGG-----TEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH---HSC-----CSS---------S---
T ss_pred             HHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH---Hhc-----cCH---------H---
Confidence            999999742     379998754 6788887   2322    22232222221   111     001         1   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHH
Q 048482          153 RLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATT  232 (403)
Q Consensus       153 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~  232 (403)
                      +..++...+.+++.++|++++++.            ..|+++.|++...++   ..++++++++++..+++||+|||+.+
T Consensus       193 ~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~l~~~~i~~~~~~l~~AG~dTta~~  257 (415)
T 2zwu_A          193 TFAEAKEALYDYLIPIIEQRRQKP------------GTDAISIVANGQVNG---RPITSDEAKRMCGLLLVGGLDTVVNF  257 (415)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTCEETT---EECCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhhcC---CCCCHHHHHHHHHHHHHHhHhHHHHH
Confidence            456677888899999999988742            568999999875432   26999999999999999999999999


Q ss_pred             HHHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCCcceEEE--EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          233 LEWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMDYLKCVS--VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       233 l~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp~l~a~i--~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      ++|++++|++||++|+||++|++   .++.+    +..-..-.|.++.+.  ++++|+.|||||.|+++.+++||||++|
T Consensus       258 l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~  333 (415)
T 2zwu_A          258 LSFSMEFLAKSPEHRQELIERPERIPAACEE----LLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDEREN  333 (415)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHTCCBCCEEEESSCEEETTEEECTTCEEECCHHHHHHCTTTS
T ss_pred             HHHHHHHHHhCHHHHHHHHhCHHHHHHHHHH----HHhhcCCcCCceeeCCCEEECCEEECCCCEEEeCchhhCCCchhC
Confidence            99999999999999999999964   22221    111122233332222  7889999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCCCCccCCccccccCCccc
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPLGKVEENLNMFEVNGLVV  386 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~  386 (403)
                      +||++|+||||-          ..++|||+|+|.|+|++||++|++++|+.|+++|+ +++.++.   .  +. ..+.+.
T Consensus       334 ~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~--~~-~~~~~~  397 (415)
T 2zwu_A          334 ACPMHVDFSRQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA---Q--IQ-HKSGIV  397 (415)
T ss_dssp             SSTTSCCTTCSS----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC---C--CC-EECSSB
T ss_pred             CCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc---c--cc-cCCccc
Confidence            999999999951          35899999999999999999999999999999998 9987531   1  21 234455


Q ss_pred             ccCCCceeeeccCCCC
Q 048482          387 HKKLPLHPVPTLYSPY  402 (403)
Q Consensus       387 ~~~~~~~v~~~~r~~~  402 (403)
                      .+..+++|++++|+.+
T Consensus       398 ~~~~~lpv~~~~r~~~  413 (415)
T 2zwu_A          398 SGVQALPLVWDPATTK  413 (415)
T ss_dssp             CEESCCEEECCGGGCC
T ss_pred             cCcceeEEEEecCCCC
Confidence            6666899999998764


No 56 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=4.5e-49  Score=370.73  Aligned_cols=340  Identities=14%  Similarity=0.163  Sum_probs=246.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccce---e-ec-----cccceecCCCchhhHHHHhHHHHhhchHHHhhhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANI---L-LY-----ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQH   73 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~---~-~~-----~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~   73 (403)
                      .++++||+++++||.+  ..|++++.......   . ..     .+.+.++..+|+.|+++||++ .+.|+++.++.+.+
T Consensus        48 ~vvv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~  124 (413)
T 2z36_A           48 AWWVSGHEEARAVLAD--GRFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGMDGAEHSAARRPV-IGEFTVKRLAALRP  124 (413)
T ss_dssp             EEEECSHHHHHHHHHC--TTEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHH-HGGGSHHHHHHHHH
T ss_pred             EEEEecHHHHHHHHcC--CCcccCccccCccccccccccccccccccccccccCchHHHHHHHHH-HHhhCHHHHHHHHH
Confidence            5789999999999985  36887764322111   1 11     145524445699999999998 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeHHHHHH-HHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhc
Q 048482           74 VRDGEVSSLITKIRLSCFNKGSPLNLLEMLL-IASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSG  149 (403)
Q Consensus        74 ~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~-~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  149 (403)
                      .++++++++++.|.+.   .++.+|+...+. .+++++   .|+...+..+.+..+...+..        ..       .
T Consensus       125 ~i~~~~~~ll~~l~~~---~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~--------~~-------~  186 (413)
T 2z36_A          125 RIQDIVDHFIDDMLAT---DQRPVDLVQALSLPVPSLVICELLGVPYTDHDFFQSRTTMMVS--------RT-------S  186 (413)
T ss_dssp             HHHHHHHHHHHHHTTC---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHTTC--------SS-------C
T ss_pred             HHHHHHHHHHHHHHHh---cCCCccHHHHHhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHhc--------cc-------C
Confidence            9999999999999741   366899876554 577777   233221111111111111100        00       0


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccch
Q 048482          150 LIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTT  229 (403)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt  229 (403)
                      . ++..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|||
T Consensus       187 ~-~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~eTt  250 (413)
T 2z36_A          187 M-EDRRRAFAELRAYIDDLITRKESEP------------GDDLFSRQIARQRQE---GTLDHAGLVSLAFLLLTAGHETT  250 (413)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHHHHHSSC------------CSSHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHSHHH
T ss_pred             c-HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhcCC---CCCCHHHHHHHHHHHHhcchHHH
Confidence            0 4566777888999999999887642            568999999875433   27999999999999999999999


Q ss_pred             HHHHHHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhhhhc
Q 048482          230 ATTLEWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWAIQR  302 (403)
Q Consensus       230 ~~~l~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~r  302 (403)
                      +.+++|++++|++||++|+||++|++   .++.+    +..-..-.| .+.-+.   ++++|+.|||||.|+++.+++||
T Consensus       251 a~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~r  326 (413)
T 2z36_A          251 ANMISLGVVGLLSHPEQLTVVKANPGRTPMAVEE----LLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANW  326 (413)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTT
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHhChHHHHHHHHH----HHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcC
Confidence            99999999999999999999999963   22221    111112222 122222   78899999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCcccccc
Q 048482          303 DPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEV  381 (403)
Q Consensus       303 d~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~  381 (403)
                      ||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++..  .+.+  .
T Consensus       327 dp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~~~~--~  392 (413)
T 2z36_A          327 DPAVFKDPAVLDVERGA----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPME--DVPF--K  392 (413)
T ss_dssp             CTTTSSSTTSCCTTCCC----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG--GSCB--C
T ss_pred             ChhhCCCccccCCCCCC----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcc--ccee--c
Confidence            99999999999999983          2489999999999999999999999999999999 588865421  2222  2


Q ss_pred             CCcccccCCCceeeec
Q 048482          382 NGLVVHKKLPLHPVPT  397 (403)
Q Consensus       382 ~~~~~~~~~~~~v~~~  397 (403)
                      .+.....-..++|+.+
T Consensus       393 ~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          393 GDSVIYGVHELPVTWH  408 (413)
T ss_dssp             TTSSSCCBSCCEEECC
T ss_pred             ccccccCcceeeEEee
Confidence            2334444445666554


No 57 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=1.6e-49  Score=373.39  Aligned_cols=340  Identities=14%  Similarity=0.107  Sum_probs=252.1

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCc----cceeecc-ccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTP----ANILLYE-CQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDG   77 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~----~~~~~~~-~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~   77 (403)
                      .+++++|+.+++||.+  ..|++++....    ...+... +.++ +..+|+.|+++|+++ ++.|+++.++.+.+.+++
T Consensus        54 ~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~  129 (411)
T 2dkk_A           54 AWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSL-AFADQPDHNRLRRAV-AGAFTVGATKRLRPRAQE  129 (411)
T ss_dssp             EEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCS-TTCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccccc-ccCCchHHHHHHHHh-hHhhCHHHHHHHHHHHHH
Confidence            5789999999999975  36776543211    1111100 3444 455799999999998 899999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeHHHHHH-HHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHH
Q 048482           78 EVSSLITKIRLSCFNKGSPLNLLEMLL-IASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        78 ~~~~li~~l~~~~~~~~~~vd~~~~~~-~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  153 (403)
                      .++++++.|..    .++.+|+...+. .+++++   .|+...+-.+   .+........  ...          ...++
T Consensus       130 ~~~~l~~~l~~----~g~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~---~~~~~~~~~~--~~~----------~~~~~  190 (411)
T 2dkk_A          130 ILDGLVDGILA----EGPPADLVERVLEPFPIAVVSEVMGVPAADRE---RVHSWTRQII--STS----------GGAEA  190 (411)
T ss_dssp             HHHHHHHHHHH----HCSCEEHHHHTTTHHHHHHHHHHHTCCSSHHH---HHHHHHGGGC--SSC----------SCSHH
T ss_pred             HHHHHHHHHHh----cCCCeehHHHHHHHHHHHHHHHHhCCCHHHHH---HHHHHHHHHH--hcc----------chHHH
Confidence            99999999985    345799987665 588887   2332211111   1111111110  000          02245


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTL  233 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l  233 (403)
                      ..++...+.+++.++|++++++.            .+|+++.|++. .++   ..++++++++++..+++|| |||+.++
T Consensus       191 ~~~~~~~l~~~~~~~i~~r~~~~------------~~dll~~ll~~-~~~---~~ls~~el~~~~~~l~~AG-eTta~~l  253 (411)
T 2dkk_A          191 AERAKRGLYGWITETVRARAGSE------------GGDVYSMLGAA-VGR---GEVGETEAVGLAGPLQIGG-EAVTHNV  253 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCC------------SSCHHHHHHHH-HHT---TSSCTTSHHHHHHHHHHTH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHh-cCC---CCCCHHHHHHHHHHHHHhh-HHHHHHH
Confidence            66777888899999998877542            56899999987 433   3799999999999999999 9999999


Q ss_pred             HHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCC-c-ceEEE---EeecccccCCCcEEEEehhhhhcCCC
Q 048482          234 EWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMD-Y-LKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQ  305 (403)
Q Consensus       234 ~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp-~-l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~  305 (403)
                      +|++++|++||++|++|++|++   .++.+    +..-..-.+ . +..+.   ++++|+.|||||.|.++.+++||||+
T Consensus       254 ~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~  329 (411)
T 2dkk_A          254 GQMLYLLLTRRELMARMRERPGARGTALDE----LLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPD  329 (411)
T ss_dssp             HHHHHHHHHSHHHHHHHHHCTTCCHHHHHH----HHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTT
T ss_pred             HHHHHHHHhCHHHHHHHHhCHHHHHHHHHH----HHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChh
Confidence            9999999999999999999974   22221    111112222 1 21222   78899999999999999999999999


Q ss_pred             CCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCc
Q 048482          306 GWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGL  384 (403)
Q Consensus       306 ~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~  384 (403)
                      +|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++..  .+  ....+.
T Consensus       330 ~f~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~--~~~~~~  395 (411)
T 2dkk_A          330 VFPDPDRIDLDRDP----------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE--QV--AWRRKT  395 (411)
T ss_dssp             TSSSTTSCCCSCSS----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG--GC--CBCCSS
T ss_pred             hCCCCCCCCCCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCcc--cc--ccccCc
Confidence            99999999999995          3589999999999999999999999999999999 899875421  12  222345


Q ss_pred             ccccCCCceeeeccCC
Q 048482          385 VVHKKLPLHPVPTLYS  400 (403)
Q Consensus       385 ~~~~~~~~~v~~~~r~  400 (403)
                      ++.+...++|++++|.
T Consensus       396 ~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          396 MIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             SBCCBSCCEEECCCCC
T ss_pred             ccCCcceeEEEeccCC
Confidence            5666778999999883


No 58 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=2.3e-49  Score=372.04  Aligned_cols=334  Identities=16%  Similarity=0.200  Sum_probs=250.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCC--C----ccc---ee-ec----cccceecCCCchhhHHHHhHHHHhhchHHHh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKT--T----PAN---IL-LY----ECQGIGFSNYGEYWRQVRKICVLQLLSVRRV   68 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~--~----~~~---~~-~~----~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l   68 (403)
                      .++++||+++++||.++  .|++++..  .    .+.   .+ ..    .+.++++ .+|+.|+++||++ ++.|+.+.+
T Consensus        39 ~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l  114 (404)
T 1z8o_A           39 AWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNMGT-SDPPTHTRLRKLV-SQEFTVRRV  114 (404)
T ss_dssp             EEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSSGGG-CCTTHHHHHHHHH-HTTSCHHHH
T ss_pred             EEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccccccc-CCCcHHHHHHHHH-HHhhCHHHH
Confidence            47899999999999865  68877643  1    110   11 11    2345444 5699999999998 899999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCC----chhhHHHHHHHHHHHhcccccchhhhh
Q 048482           69 QSFQHVRDGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTG----QSNKFGELLRRLEEQFAAFCVGDTFLF  140 (403)
Q Consensus        69 ~~~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~  140 (403)
                      +.+.+.++++++++++.|.     .++.+|+...+ ..+++++   .|+    ..+.+......+..    .     .+ 
T Consensus       115 ~~~~~~i~~~~~~l~~~l~-----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~----~-----~~-  179 (404)
T 1z8o_A          115 EAMRPRVEQITAELLDEVG-----DSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSSEILV----M-----DP-  179 (404)
T ss_dssp             HHTHHHHHHHHHHHHHTSC-----SSSEEEHHHHTTTHHHHHHHHHHTTCCGGGTTTHHHHHHHHHC----C-----CG-
T ss_pred             HHHHHHHHHHHHHHHHhhh-----hcCCcchHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc----c-----CC-
Confidence            9999999999999999985     35589998654 5787877   232    22334333332221    0     00 


Q ss_pred             hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHh-hhcCCCCCCCCHHHHHHHHH
Q 048482          141 LGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQL-RKDGMLGAELSQDNLKAVIL  219 (403)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~-~~~~~~~~~~s~~~i~~~~~  219 (403)
                             +. .++..++...+.+++.+.|++++++.            .+|+++.|++. ..++   ..++++++++++.
T Consensus       180 -------p~-~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~~---~~l~~~ei~~~~~  236 (404)
T 1z8o_A          180 -------ER-AEQRGQAAREVVNFILDLVERRRTEP------------GDDLLSALIRVQDDDD---GRLSADELTSIAL  236 (404)
T ss_dssp             -------GG-HHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCEETTT---EECCHHHHHHHHH
T ss_pred             -------hh-HHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhhcccC---CCCCHHHHHHHHH
Confidence                   11 45567778889999999999988642            56899999987 4322   2699999999999


Q ss_pred             HHHhcCccchHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEE
Q 048482          220 DMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRV  293 (403)
Q Consensus       220 ~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v  293 (403)
                      .+++||+|||+.+++|++++|++||++|+||++|++.   ++.+    +..-..-.|.+..+.   ++++|+.|||||.|
T Consensus       237 ~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V  312 (404)
T 1z8o_A          237 VLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEE----ILRYIAPPETTTRFAAEEVEIGGVAIPQYSTV  312 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHTCSSCCEEEEESSCEEETTEEECTTCEE
T ss_pred             HHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHHhHHHHHHH----HHHhcCCccCcceEECCCEEECCEEECCCCEE
Confidence            9999999999999999999999999999999999642   2211    111111122222222   78899999999999


Q ss_pred             EEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCc
Q 048482          294 IVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKV  372 (403)
Q Consensus       294 ~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~  372 (403)
                      +++.+++||||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..
T Consensus       313 ~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~  382 (404)
T 1z8o_A          313 LVANGAANRDPKQFPDPHRFDVTRDT----------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDAD  382 (404)
T ss_dssp             EECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG
T ss_pred             EecchhhcCCcccCCChhhcCCCCCC----------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCC
Confidence            99999999999999999999999983          2589999999999999999999999999999999 588865321


Q ss_pred             cCCccccccCCcccccCCCceeee
Q 048482          373 EENLNMFEVNGLVVHKKLPLHPVP  396 (403)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~v~~  396 (403)
                        .  +....+.++.+...++|++
T Consensus       383 --~--~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          383 --D--VVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             --G--CCCCCCSSSCCCSCCEEET
T ss_pred             --c--ceeccccccCCcceeEEEe
Confidence              1  2223455666777888875


No 59 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=7e-49  Score=369.60  Aligned_cols=334  Identities=15%  Similarity=0.184  Sum_probs=246.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceee-----c--cccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILL-----Y--ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~-----~--~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      .++++||+++++||.++  .|++++....+..+.     .  .+.++ +..+|+.|+++||++ .+.|+.+.++.+.+.+
T Consensus        51 ~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i  126 (412)
T 2zbx_A           51 AWVVTKHEAARKLLGDP--RLSSNRTDDNFPATSPRFEAVRESPQAF-IGLDPPEHGTRRRMT-ISEFTVKRIKGMRPEV  126 (412)
T ss_dssp             EEEECSHHHHHHHHTCT--TEECCTTSTTSCCCSGGGC----CCCCG-GGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHH
T ss_pred             EEEEecHHHHHHHHcCc--ccccCccccccccccccccccccccccc-ccCCcHHHHHHHHHh-hhhcCHHHHHHHHHHH
Confidence            46899999999999754  355554311111110     0  12344 445799999999998 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHHHHHH-HHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLEMLLI-ASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~~~~~-~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      +++++.+++.|..    .++.+|+...+.. +++++   .|+..    +.+......+..   .                
T Consensus       127 ~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~---~----------------  183 (412)
T 2zbx_A          127 EEVVHGFLDEMLA----AGPTADLVSQFALPVPSMVICRLLGVPYADHEFFQDASKRLVQ---S----------------  183 (412)
T ss_dssp             HHHHHHHHHHHHH----HCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHH---C----------------
T ss_pred             HHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhc---c----------------
Confidence            9999999999974    3567999887764 77777   22221    223222222111   0                


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCcc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTD  227 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~  227 (403)
                      ... ++..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..+++||+|
T Consensus       184 ~~~-~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~ls~~ei~~~~~~~~~AG~d  247 (412)
T 2zbx_A          184 TDA-QSALTARNDLAGYLDGLITQFQTEP------------GAGLVGALVADQLAN---GEIDREELISTAMLLLIAGHE  247 (412)
T ss_dssp             SSH-HHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHTTTTT---TSSCHHHHHHHHHHHHHHHHH
T ss_pred             CcH-HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHH
Confidence            011 4566778888999999999988652            568999999876432   379999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhhh
Q 048482          228 TTATTLEWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWAI  300 (403)
Q Consensus       228 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~~  300 (403)
                      ||+.+++|++++|++||++|+||++|++   .++.+    +..-..-.| .+.-+.   ++++||.|||||.|+++.+++
T Consensus       248 Tt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~  323 (412)
T 2zbx_A          248 TTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEE----LLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIA  323 (412)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHH
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHhChHhHHHHHHH----HHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhh
Confidence            9999999999999999999999999853   22221    111111222 111122   788999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCcccc
Q 048482          301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMF  379 (403)
Q Consensus       301 ~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~  379 (403)
                      ||||++|+||++|+||||          +..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+..  .  +.
T Consensus       324 ~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~--~--~~  389 (412)
T 2zbx_A          324 NRDGTVYEDPDALDIHRS----------ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVE--Q--LV  389 (412)
T ss_dssp             TTCTTTSSSTTSCCTTSC----------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--SC
T ss_pred             cCCccccCCccccCCCCC----------CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcc--c--ce
Confidence            999999999999999997          23589999999999999999999999999999999 799865321  1  22


Q ss_pred             ccCCcccccCCCceeeec
Q 048482          380 EVNGLVVHKKLPLHPVPT  397 (403)
Q Consensus       380 ~~~~~~~~~~~~~~v~~~  397 (403)
                      ...+.+...-..++|+.+
T Consensus       390 ~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          390 LRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             BCCTTSCCCBSCCEEECC
T ss_pred             eccccccCCcceeeeecc
Confidence            233444444456666554


No 60 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=4.1e-49  Score=370.48  Aligned_cols=333  Identities=14%  Similarity=0.136  Sum_probs=246.4

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccc----e-eeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPAN----I-LLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDG   77 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~----~-~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~   77 (403)
                      .++++||+++++||.+  ..|++++......    . ....+.++++. +|+.|+++||++ ++.|+++.++.+.+.+++
T Consensus        51 ~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~  126 (406)
T 1s1f_A           51 AWLVTRHDDVRLVTND--PRFGREAVMDRQVTRLAPHFIPARGAVGFL-DPPDHTRLRRSV-AAAFTARGVERVRERSRG  126 (406)
T ss_dssp             EEEECSHHHHHHHHTC--TTEESTTTTTTTBCBSSSSCSSCTTSGGGC-CTTHHHHHHHHH-HHHHSHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcC--CCccCCcCCCCCcccccccccccccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHH
Confidence            5789999999999975  4688776432111    1 11114555554 699999999998 899999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCc----hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhc
Q 048482           78 EVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQ----SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSG  149 (403)
Q Consensus        78 ~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  149 (403)
                      +++++++.|.+    .++.+|+...+ ..+++++   .|+.    .+.+......+.....        +          
T Consensus       127 ~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~--------~----------  184 (406)
T 1s1f_A          127 MLDELVDAMLR----AGPPADLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSH--------G----------  184 (406)
T ss_dssp             HHHHHHHHHHH----HCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHT--------T----------
T ss_pred             HHHHHHHHHHh----cCCCccHHHHHhhHhHHHHHHHHhCCCHHHHHHHHHHHHHHHhccC--------C----------
Confidence            99999999974    24479988655 4677777   2222    2223332222221100        0          


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccch
Q 048482          150 LIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTT  229 (403)
Q Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt  229 (403)
                       .++..++...+.+++.++|+++++..            .+|+++.|++...+    ..++++++++++..+++|| |||
T Consensus       185 -~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AG-eTt  246 (406)
T 1s1f_A          185 -AEVSERAKNEMNAYFSDLIGLRSDSA------------GEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGG-EAV  246 (406)
T ss_dssp             -CCCCHHHHTHHHHHHHHHHHTSCCSC------------CCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHT-THH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhh-HHH
Confidence             12345566778888888888776531            56899999987643    2799999999999999999 999


Q ss_pred             HHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCC--cceEEE---EeecccccCCCcEEEEehhhhh
Q 048482          230 ATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMD--YLKCVS---VRWRDYNILAKTRVIVNAWAIQ  301 (403)
Q Consensus       230 ~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp--~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~  301 (403)
                      +.+++|++++|++||++|+||++|++.   ++.+    +..-..-.|  .+..+.   ++++|+.|||||.|+++.+++|
T Consensus       247 ~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~  322 (406)
T 1s1f_A          247 TNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDE----LLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAAN  322 (406)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHH----HHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHT
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhc
Confidence            999999999999999999999999642   2221    111112222  222222   7889999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccc
Q 048482          302 RDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFE  380 (403)
Q Consensus       302 rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~  380 (403)
                      |||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++..  .  +..
T Consensus       323 rdp~~~~dP~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~--~~~  388 (406)
T 1s1f_A          323 RDPEVFPDPDRIDFERSP----------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE--D--VPF  388 (406)
T ss_dssp             TCTTTSSSTTSCCTTC------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG--G--SCB
T ss_pred             CCcccCCCcceeCCCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc--c--cee
Confidence            999999999999999995          2489999999999999999999999999999999 799876521  1  222


Q ss_pred             cCCcccccCCCceeeec
Q 048482          381 VNGLVVHKKLPLHPVPT  397 (403)
Q Consensus       381 ~~~~~~~~~~~~~v~~~  397 (403)
                      ..+.+......++|++.
T Consensus       389 ~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          389 KKGALIRGPEALPVTWH  405 (406)
T ss_dssp             CSSCSBCCBSCCEEECC
T ss_pred             ccCcccCCcceeEEeeC
Confidence            33445566667887763


No 61 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=1e-48  Score=369.35  Aligned_cols=353  Identities=14%  Similarity=0.122  Sum_probs=255.1

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .+++++|++++ ++.+. ..|++++...........|.+.++..+|+.|+++|+++ .+.|+++.++.+.+.+.+.++++
T Consensus        45 ~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l  121 (415)
T 3awm_A           45 TNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRA  121 (415)
T ss_dssp             EEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTSCSSSGGGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCHHHHH-HHhcc-cccccccccchhhhhhccCCcceeecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHH
Confidence            46889999987 67543 56776543221000001132334555699999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHHHHHHhhcc---CC---chhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEMLLIASKEEN---TG---QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNA  156 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~~~~~~~v~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  156 (403)
                      ++.|..     ++.+|+.+.+..+++++.   |+   .+.++.+....+...+..+.      .+      ....++..+
T Consensus       122 l~~~~~-----~~~vdl~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~  184 (415)
T 3awm_A          122 VPGWTR-----KGEIVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALFDAAG------SA------SPRHLWSRL  184 (415)
T ss_dssp             HHHHHH-----HSEEEHHHHHHHHHHHHHHHHHTCCCCGGGHHHHHHHHHHHHHSTT------CS------SHHHHHHHH
T ss_pred             HHhhcc-----CCcEeHHHHHHHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHhc------cc------CchHHHHHH
Confidence            999974     347999999999999982   22   22234444443333332211      00      112345667


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHHH
Q 048482          157 TARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWA  236 (403)
Q Consensus       157 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~~  236 (403)
                      +...+.+++.++|+++++....   ..     .+|+++.|++....++  ..++++++...+..++ ||++||+.+++|+
T Consensus       185 ~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~g--~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~  253 (415)
T 3awm_A          185 ARRRVDAWAKRIIEGIRAGSIG---SG-----SGTAAYAIAWHRDRHD--DLLSPHVAAVELVNVL-RPTVAIAVYITFV  253 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSC---CC-----TTSHHHHHHHCBCTTS--CBCCHHHHHHHHHHHH-HHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhc---CC-----CCCHHHHHHhhhhccC--CCCCHHHHHHHHHHHH-HhhhhHHHHHHHH
Confidence            8888999999999998875311   12     5689999998654322  3588888887776655 8999999999999


Q ss_pred             HHHHhhChhhHHHHHHHH---HHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCC
Q 048482          237 MAELVKNPTSMKRAREEV---RSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRP  310 (403)
Q Consensus       237 l~~L~~~p~~q~~l~~Ei---~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp  310 (403)
                      +++|++||++|++|++|.   +.++.+.    ..-..-.+.+....   ++++|+.|||||.|+++.+++||||++|+||
T Consensus       254 l~~L~~~P~~~~~l~~e~~~l~a~i~E~----lRl~p~~~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp  329 (415)
T 3awm_A          254 AHALQTCSGIRAALVQQPDYAELFVQEV----RRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP  329 (415)
T ss_dssp             HHHHHHSTTHHHHHHHCTTHHHHHHHHH----HHHSCCSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSST
T ss_pred             HHHHHhChHHHHHHHHHHHHHHHHHHHH----hhcCCCccccceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCc
Confidence            999999999999999972   1222110    00111111111111   7889999999999999999999999999999


Q ss_pred             CCCCCccccccccCCCCCCccccccCCC----CCCCCChHHHHHHHHHHHHHHHhcceeecCCCCccCCccccccCCccc
Q 048482          311 EDFLSDKFLNSLVDCKSQDFEFISFGAG----RRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLVV  386 (403)
Q Consensus       311 ~~F~PeRf~~~~~~~~~~~~~~~~FG~G----~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  386 (403)
                      ++|+||||++.+    ..+..|+|||+|    +|.|+|++||++|++++|+.|+++|++++.++.    ..+. ...+++
T Consensus       330 ~~F~P~R~~~~~----~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~----~~~~-~~~~~~  400 (415)
T 3awm_A          330 QEFRPERFRAWD----EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD----LSID-FARLPA  400 (415)
T ss_dssp             TSCCGGGGGGCC----CCSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC----CCBC-TTSSSC
T ss_pred             cccChhhcCCCC----CCCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC----CCcC-cCCCcc
Confidence            999999999753    245689999999    599999999999999999999999999986542    1222 234667


Q ss_pred             ccCCCceeeeccC
Q 048482          387 HKKLPLHPVPTLY  399 (403)
Q Consensus       387 ~~~~~~~v~~~~r  399 (403)
                      .|+.+++++++++
T Consensus       401 ~p~~~~~~~~~~~  413 (415)
T 3awm_A          401 LPKSGFVMRNVHI  413 (415)
T ss_dssp             CBTTCCEEEEEES
T ss_pred             ccCCCceEEEEeC
Confidence            8888999998853


No 62 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=5.7e-50  Score=374.48  Aligned_cols=336  Identities=18%  Similarity=0.221  Sum_probs=241.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCC-CCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRP-KTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSS   81 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~-~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~   81 (403)
                      .++++||+++++||.++  .|++++ .......+  .|.++++ .+|+.|+++||++ .+.|+++.++.+.+.+++++++
T Consensus        43 ~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~--~g~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~  116 (389)
T 1n97_A           43 LALIFDPEGVEGALLAE--GTTKATFQYRALSRL--TGRGLLT-DWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARA  116 (389)
T ss_dssp             EEEECSHHHHHHHHHCT--TEECCSHHHHHHHHH--HCSSTTT-CCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHhcC--CCCCChhHHHHHHHH--hCCcccc-CCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHH
Confidence            46799999999999865  787765 21111111  1345444 4699999999998 8999999999999999999999


Q ss_pred             HHHHHHHhccCCCCceeHHHHHHHHHhhc----cCCch--hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHH
Q 048482           82 LITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQS--NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLN  155 (403)
Q Consensus        82 li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  155 (403)
                      +++.|.      ++.+|+.+.+..+++++    .|+.+  +++.+....+.....    ...++++.+++  ....++..
T Consensus       117 l~~~l~------~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p--~~~~~~~~  184 (389)
T 1n97_A          117 FFGEWR------GEERDLDHEMLALSLRLLGRALFGKPLSPSLAEHALKALDRIM----AQTRSPLALLD--LAAEARFR  184 (389)
T ss_dssp             HHHTCC------SCCEEHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHH----HHHHCGGGGGC--HHHHHHHH
T ss_pred             HHHHcc------CCcCcHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH----HHHhhHHHhcC--CchhHHHH
Confidence            998874      45899999999999999    22221  244444444433221    11111112221  11223333


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHH
Q 048482          156 ATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEW  235 (403)
Q Consensus       156 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~  235 (403)
                      ++.+.+.+++.+.|++                 .      |+     .    .++++++++++..+++||+|||+.+++|
T Consensus       185 ~~~~~~~~~~~~~i~~-----------------r------ll-----~----~l~~~~l~~~~~~~~~aG~~Tt~~~l~~  232 (389)
T 1n97_A          185 KDRGALYREAEALIVH-----------------P------PL-----S----HLPRERALSEAVTLLVAGHETVASALTW  232 (389)
T ss_dssp             HHHHHHHHHHGGGTTS-----------------T------TG-----G----GSCHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-----------------H------hc-----c----cCCHHHHHHHHHHHHHcCchhHHHHHHH
Confidence            4444444443333221                 1      22     1    6899999999999999999999999999


Q ss_pred             HHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCCCC
Q 048482          236 AMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPED  312 (403)
Q Consensus       236 ~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~  312 (403)
                      ++++|++||++|+||++|++.+..- -..+..-..-.|.+..+.   ++++|+.|||||.|.++.+++|||  +|+||++
T Consensus       233 ~l~~L~~~P~~~~~l~~E~~~~~a~-i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~  309 (389)
T 1n97_A          233 SFLLLSHRPDWQKRVAESEEAALAA-FQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEA  309 (389)
T ss_dssp             HHHHHTTCHHHHHHHHHCHHHHHHH-HHHHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTS
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHhcCCCccccceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccc
Confidence            9999999999999999999876410 000111112223322222   788999999999999999999999  9999999


Q ss_pred             CCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCCCCccCCccccccCCcccccCCCc
Q 048482          313 FLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPLGKVEENLNMFEVNGLVVHKKLPL  392 (403)
Q Consensus       313 F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (403)
                      |+||||++..   ...+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++..     .  ..+++..|+.++
T Consensus       310 F~PeR~l~~~---~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~--~~~~~~~p~~~~  379 (389)
T 1n97_A          310 FRPERFLEER---GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR-----V--LAQVTLRPEGGL  379 (389)
T ss_dssp             CCTTHHHHSC---CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC-----E--EESSSEEETTCC
T ss_pred             cCCccCCCCC---CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc-----c--cceEEeeeCCCc
Confidence            9999998651   23456899999999999999999999999999999999999875532     1  456777888899


Q ss_pred             eeeeccCCC
Q 048482          393 HPVPTLYSP  401 (403)
Q Consensus       393 ~v~~~~r~~  401 (403)
                      +|++++|.+
T Consensus       380 ~v~~~~~~~  388 (389)
T 1n97_A          380 PARPREEVR  388 (389)
T ss_dssp             EECCBC---
T ss_pred             eEEEeeccc
Confidence            999998754


No 63 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=4.7e-49  Score=370.89  Aligned_cols=338  Identities=17%  Similarity=0.198  Sum_probs=246.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCC-Cccceee--ccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKT-TPANILL--YECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~-~~~~~~~--~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~   79 (403)
                      .++++||+++++||.++  .|++++.. ..+..+.  ..+.+++ ..+|+.|+++||++ .+.|+++.++.+.+.+++++
T Consensus        63 ~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~  138 (417)
T 2y5n_A           63 AWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLL-SMDPPEHSRLRRLV-VKAFTARRAESLRPRAREIA  138 (417)
T ss_dssp             EEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGG-GCCTTHHHHHHHHH-HHHSCHHHHHHTHHHHHHHH
T ss_pred             EEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCc-cCCchHHHHHHHHH-hhhcCHHHHHHHHHHHHHHH
Confidence            57899999999999754  47765432 1111111  1234544 45699999999998 89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHH
Q 048482           80 SSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLN  155 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  155 (403)
                      +++++.|..    ++..+|+...+ ..+++++   .|+...+-.+.+..+...+..  .   +         ....++..
T Consensus       139 ~~ll~~l~~----~~~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~--~---~---------~~~~~~~~  200 (417)
T 2y5n_A          139 HELVDQMAA----TGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLS--T---A---------EVTAEEMQ  200 (417)
T ss_dssp             HHHHHHHHH----HCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTST--T---C---------CCCHHHHH
T ss_pred             HHHHHHHHh----CCCCeeHHHHHHHHhHHHHHHHHcCCCHHHHHHHHHHHHHHhc--c---c---------CCCHHHHH
Confidence            999999974    22379998765 4577777   233221111111111111110  0   0         01124566


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHH
Q 048482          156 ATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEW  235 (403)
Q Consensus       156 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~  235 (403)
                      ++...+.+++.++|+++++..            .+|+++.|++...++   ..++++++++++..+++||+|||+.+++|
T Consensus       201 ~~~~~l~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~eTta~~l~~  265 (417)
T 2y5n_A          201 EAAEQAYAYMGDLIDRRRKEP------------TDDLVSALVQARDQQ---DSLSEQELLDLAIGLLVAGYESTTTQIAD  265 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            778889999999999988652            568999999875432   36999999999999999999999999999


Q ss_pred             HHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCC--cceEEE---EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          236 AMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMD--YLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       236 ~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp--~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      ++++|++||++|+||++|++   .++.+    +..-..-.|  .+..+.   ++++|+.|||||.|+++.+++||||++|
T Consensus       266 ~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~  341 (417)
T 2y5n_A          266 FVYLLMTRPELRRQLLDRPELIPSAVEE----LTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQF  341 (417)
T ss_dssp             HHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS
T ss_pred             HHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccC
Confidence            99999999999999999963   22221    111112222  222222   7889999999999999999999999999


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCccc
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVV  386 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~  386 (403)
                      +||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++..  .  +....+.+.
T Consensus       342 ~dP~~F~PeR~~----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~--~~~~~~~~~  407 (417)
T 2y5n_A          342 PDADRIDVDRTP----------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET--Q--LRWSEGMLL  407 (417)
T ss_dssp             TTTTSCCTTCSS----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--CCBCCCSSB
T ss_pred             CCccccCCCCCC----------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc--c--ceeccCccc
Confidence            999999999983          3589999999999999999999999999999999 588865421  2  222334455


Q ss_pred             ccCCCceee
Q 048482          387 HKKLPLHPV  395 (403)
Q Consensus       387 ~~~~~~~v~  395 (403)
                      .....++|+
T Consensus       408 ~~~~~lpv~  416 (417)
T 2y5n_A          408 RGPLELPVV  416 (417)
T ss_dssp             CCBSCCEEE
T ss_pred             CCcceeEEe
Confidence            555666665


No 64 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=4.3e-49  Score=370.77  Aligned_cols=339  Identities=16%  Similarity=0.157  Sum_probs=250.5

Q ss_pred             ccccCCHHHHHHHHHhccccccCCC-CCCccc--eeec--------c-ccceecCCCchhhHHHHhHHHHhhchHHHhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRP-KTTPAN--ILLY--------E-CQGIGFSNYGEYWRQVRKICVLQLLSVRRVQS   70 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~-~~~~~~--~~~~--------~-~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~   70 (403)
                      .++++||+++++||.++  .|++++ ......  ....        . +.+ ++..+|+.|+++||++ .+.|+++.++.
T Consensus        43 ~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~~~R~~~-~~~fs~~~l~~  118 (411)
T 1gwi_A           43 VWAVTHHAEAKALLTDP--RLVKDINVWGAWRRGEIPADWPLIGLANPGRS-MLTVDGAEHRRLRTLV-AQALTVRRVEH  118 (411)
T ss_dssp             EEEECSHHHHHHHHTCT--TEECCGGGCHHHHTTCSCTTCTTHHHHSCCSS-GGGCCHHHHHHHHHHH-TTTSCHHHHHT
T ss_pred             EEEEeCHHHHHHHHcCC--ccccCcccccccccccCCcccchhhhhccccc-cccCCcHHHHHHHHHH-HHhcCHHHHHH
Confidence            46899999999999754  244443 111000  0000        1 234 4555799999999998 89999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCCCceeHHHHHH-HHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhh
Q 048482           71 FQHVRDGEVSSLITKIRLSCFNKGSPLNLLEMLL-IASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLG  142 (403)
Q Consensus        71 ~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~-~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~  142 (403)
                      +.+.++++++++++.|..    .++.+|+...+. .+++++   .|+..    +.+......+.   ..           
T Consensus       119 ~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~---~~-----------  180 (411)
T 1gwi_A          119 MRGRITELTDRLLDELPA----DGGVVDLKAAFAYPLPMYVVADLMGIEEARLPRLKVLFEKFF---ST-----------  180 (411)
T ss_dssp             THHHHHHHHHHHHHTSCC----SCCCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHH---CT-----------
T ss_pred             HHHHHHHHHHHHHHHHHH----cCCCcchHHHHhhHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---cc-----------
Confidence            999999999999999852    356899988775 477777   22221    22222222211   10           


Q ss_pred             hhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHH
Q 048482          143 CLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMF  222 (403)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~  222 (403)
                           ....++..++...+.+++.++|++++++.            .+|+++.|++...++   ..++++++++++..++
T Consensus       181 -----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~~~  240 (411)
T 1gwi_A          181 -----QTPPEEVVATLTELASIMTDTVAAKRAAP------------GDDLTSALIQASENG---DHLTDAEIVSTLQLMV  240 (411)
T ss_dssp             -----TSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHH
T ss_pred             -----CCChHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhcccC---CCCCHHHHHHHHHHHH
Confidence                 01124566777888999999999888642            568999999875432   3699999999999999


Q ss_pred             hcCccchHHHHHHHHHHHhhChhhHHHHHHHH---HHHhcCCCcCChhhccCCCc-ceEEE---EeecccccCCCcEEEE
Q 048482          223 VAGTDTTATTLEWAMAELVKNPTSMKRAREEV---RSVAKGKLNIDMKDIEKMDY-LKCVS---VRWRDYNILAKTRVIV  295 (403)
Q Consensus       223 ~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei---~~~~~~~~~~~~~~~~~lp~-l~a~i---~~~~g~~ip~Gt~v~~  295 (403)
                      +||+|||+.+++|++++|++||++|+||++|+   +.++.+.    ..-..-.|. +.-+.   ++++|+.|||||.|++
T Consensus       241 ~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E~----lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~  316 (411)
T 1gwi_A          241 AAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEET----LRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIV  316 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHH----HHHSCSBCCEEEEEESSCEEETTEEECTTCEEEE
T ss_pred             HHHhhHHHHHHHHHHHHHHhChHHHHHHHcChHHHHHHHHHH----HHhCCcccCCceeeeCCCeEECCEEECCCCEEEe
Confidence            99999999999999999999999999999984   2222211    111111221 11111   7889999999999999


Q ss_pred             ehhhhhcCCCCC-CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCcc
Q 048482          296 NAWAIQRDPQGW-DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVE  373 (403)
Q Consensus       296 ~~~~~~rd~~~~-~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~  373 (403)
                      +.+++||||++| +||++|+||||..         ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+.. 
T Consensus       317 ~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-  386 (411)
T 1gwi_A          317 SYGALGRDERAHGPTADRFDLTRTSG---------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAA-  386 (411)
T ss_dssp             CHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-
T ss_pred             cHHHhcCChhhcCCChhhcCCCCCCC---------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcc-
Confidence            999999999999 9999999999952         3699999999999999999999999999999999 799864321 


Q ss_pred             CCccccccCCcccccCCCceeeeccCC
Q 048482          374 ENLNMFEVNGLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~v~~~~r~  400 (403)
                       .  +....+.+..+...++|++++|.
T Consensus       387 -~--~~~~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          387 -E--LRNKPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             -G--CCBCSCTTBCCBSCCEEESSCC-
T ss_pred             -c--ccccccccccCcceeEEEecCCC
Confidence             1  22334456677789999999884


No 65 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=2.5e-48  Score=363.53  Aligned_cols=321  Identities=14%  Similarity=0.154  Sum_probs=237.7

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .+++++++.+++++.+.  .|+.++...........+. .++..+|+.|+++||++ ++.|+++.++.+.+.+++.++++
T Consensus        42 ~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~-~l~~~dg~~h~~~R~~~-~~~fs~~~~~~~~~~i~~~~~~l  117 (394)
T 2wiy_A           42 TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASD-TALGSDPPHHTVLRRQT-NKWFTPKLVDGWVRTTRELVGDL  117 (394)
T ss_dssp             CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGG-SGGGCCTTHHHHHHHHH-HTTCSHHHHHHHTHHHHHHHHHH
T ss_pred             eEEEcCHHHHHHHHcCC--Cccccccccccccchhccc-ccccCCchHHHHHHHHH-HhccCHHHHHHHHHHHHHHHHHH
Confidence            37899999999999643  5654421110111111123 35556799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHHHHHHhhc----cCCch-hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQS-NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNAT  157 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  157 (403)
                      ++.|.     .++.+|+...+..+++++    .|+.. ++.......+...+..   ....|.       .....+..++
T Consensus       118 ~~~~~-----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~---~~~~p~-------~~~~~~~~~~  182 (394)
T 2wiy_A          118 LDGVE-----AGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAMLM---QSAEPA-------DGDVDRAAVA  182 (394)
T ss_dssp             HHTCC-----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHGG---GSSSCC-------TTHHHHHHHH
T ss_pred             HHHHh-----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHHh---ccCCcc-------chHHHHHHHH
Confidence            99874     456799999998888886    22211 1222222222121111   001111       1223445567


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHHHH
Q 048482          158 ARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAM  237 (403)
Q Consensus       158 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~~l  237 (403)
                      ...+.+++.++|++++++.            .+|+++.|++...++    .++++++++++..+++||+|||+++++|++
T Consensus       183 ~~~l~~~~~~~i~~rr~~~------------~~dll~~Ll~~~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l  246 (394)
T 2wiy_A          183 FGYLSARVAEMLEDKRVNP------------GDGLADSLLDAARAG----EITESEAIATILVFYAVGHMAIGYLIASGI  246 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCC------------CCcHHHHHHHhhhcC----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            7888899999999887642            568999999876542    699999999999999999999999999999


Q ss_pred             HHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCCC
Q 048482          238 AELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPE  311 (403)
Q Consensus       238 ~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~  311 (403)
                      ++|++||++|++|++|++.   ++.+.    ..-..-.+.+..+.   ++++|+.||||+.|+++.+++||||++|+||+
T Consensus       247 ~~L~~~P~~~~~l~~e~~~l~a~i~E~----LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~  322 (394)
T 2wiy_A          247 ELFARRPEVFTAFRNDESARAAIINEM----VRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPD  322 (394)
T ss_dssp             HHHHHCHHHHHHHHHCGGGHHHHHHHH----HHHSCSBCEEEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTT
T ss_pred             HHHHHCHHHHHHHHhChHhHHHHHHHH----HhhCCCccCeeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCcc
Confidence            9999999999999998632   22110    11111111111111   88999999999999999999999999999999


Q ss_pred             CCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCCC
Q 048482          312 DFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPLG  370 (403)
Q Consensus       312 ~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~  370 (403)
                      +|+|+||.+.        ..++|||+|+|.|+|++||++|++++|+.|+++|+ +++.++
T Consensus       323 ~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~  374 (394)
T 2wiy_A          323 VFDHTRPPAA--------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE  374 (394)
T ss_dssp             SCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSC
T ss_pred             ccCCCCCCCC--------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence            9999999853        25899999999999999999999999999999997 998653


No 66 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=9e-48  Score=359.15  Aligned_cols=326  Identities=14%  Similarity=0.152  Sum_probs=245.6

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+++++||. +...|++++.......... +.+.++..+|+.|+.+||++ ++.|+.++++.+.+.+.+.++.+
T Consensus        41 ~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l  117 (384)
T 3oo3_A           41 QWLVTGHDEVRAILA-DHERFSSMRPVDDEADRAL-LPGILQAYDPPDHTRLRRTV-APAYSARRMERLRPRIEEIVEEC  117 (384)
T ss_dssp             EEEECCHHHHHHHHH-CTTTEECSCCCC-----CC-CTTCGGGCCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHh-CchhccCCccccccccccc-cccccccCCChhHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHH
Confidence            378999999999994 5578988876543322221 24455666799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHHHHHHhhc----cCC----chhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEMLLIASKEE----NTG----QSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++.|.+    .++.+|+.+.+...+..+    .|+    ..+.+.+....+..                    ....++.
T Consensus       118 ~~~l~~----~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~--------------------~~~~~~~  173 (384)
T 3oo3_A          118 LDDFES----VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIRESRE--------------------SRLPRQR  173 (384)
T ss_dssp             HHHHHH----SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHH--------------------CSCHHHH
T ss_pred             HHHHHh----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhc--------------------cCChHHH
Confidence            999975    466899988877655443    222    22233333332221                    1234556


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                      .++...+.+++.++|+++++..            .+|+++.|++.. +    ..++++++++++..+++||+|||+.+++
T Consensus       174 ~~~~~~~~~~~~~~i~~~~~~~------------~~d~l~~ll~~~-~----~~l~~~~l~~~~~~~~~AG~~Tta~~l~  236 (384)
T 3oo3_A          174 TLSGLGIVNYTKRLTSGKRRDP------------GDGMIGVIVREH-G----AEISDEELAGLAEGNLIMAAEQMAAQLA  236 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHH-G----GGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhc-C----CCCCHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            7788889999999999887642            569999999872 2    2799999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCCc-c-eEEE--EeecccccCCCcEEEEehhhhhcCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMDY-L-KCVS--VRWRDYNILAKTRVIVNAWAIQRDPQGW  307 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp~-l-~a~i--~~~~g~~ip~Gt~v~~~~~~~~rd~~~~  307 (403)
                      |++++|++||++|++|++|++.   ++.+    +..-..-.|. + +.+.  ++++||.|||||.|+++.+++||     
T Consensus       237 ~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----  307 (384)
T 3oo3_A          237 VAVLLLVTHPDQMALLREKPELIDSATEE----VLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----  307 (384)
T ss_dssp             HHHHHHHTSHHHHHHHHHCGGGHHHHHHH----HHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----
T ss_pred             HHHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----
Confidence            9999999999999999999754   2221    1111111221 1 2222  78899999999999999999999     


Q ss_pred             CCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccC-Ccc
Q 048482          308 DRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVN-GLV  385 (403)
Q Consensus       308 ~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~-~~~  385 (403)
                      +||++|+||||          +..|+|||+|+|.|+|++||.+|++++|+.|+++| ++++.++..  +  +.... +.+
T Consensus       308 ~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~--~~~~~~~~~  373 (384)
T 3oo3_A          308 APGDRFDITRE----------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEE--D--LRFKPGRPA  373 (384)
T ss_dssp             CTTCCCCTTCS----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--CCEECSSSS
T ss_pred             CCcceeCCCCC----------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCc--c--ceeeccccc
Confidence            99999999996          34699999999999999999999999999999999 999876532  1  22222 344


Q ss_pred             cccCCCceee
Q 048482          386 VHKKLPLHPV  395 (403)
Q Consensus       386 ~~~~~~~~v~  395 (403)
                      ..+...++|+
T Consensus       374 ~~~~~~lpv~  383 (384)
T 3oo3_A          374 PFAVEELPLE  383 (384)
T ss_dssp             CCEESCCEEE
T ss_pred             ccCcceeeee
Confidence            4444556654


No 67 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=6.7e-48  Score=361.29  Aligned_cols=327  Identities=16%  Similarity=0.188  Sum_probs=243.5

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCc-cceeeccccce-ecCCCc------hhhHHHHhHHHHhhchHHHhhhhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTP-ANILLYECQGI-GFSNYG------EYWRQVRKICVLQLLSVRRVQSFQHV   74 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~-~~~~~~~~~~~-~~~~~g------~~w~~~Rk~~~~~~f~~~~l~~~~~~   74 (403)
                      .++++||+++++||.++  .|++++.... ..... .+.+. ++..+|      +.|+++||++ .+.|+++.++.+.+.
T Consensus        52 ~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~~~~~h~~~R~~~-~~~fs~~~l~~~~~~  127 (404)
T 2xbk_A           52 AWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAESGRRQHAETRRLL-TPLFSARRVLEMQPK  127 (404)
T ss_dssp             EEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHHHHHHHHHHHHHHH-GGGGCHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCCCCCchHHHHHHHh-hhhcCHHHHHHHHHH
Confidence            57899999999999754  4776654321 11111 13441 444569      9999999998 899999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhh
Q 048482           75 RDGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDV  146 (403)
Q Consensus        75 i~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  146 (403)
                      ++++++++++.|..    .++.+|+...+ ..+++++   .|+..    +.+......   ++..   .  .+       
T Consensus       128 i~~~~~~ll~~l~~----~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~---~~~~---~--~~-------  188 (404)
T 2xbk_A          128 VEEAADTLLDAFIA----QGPPGDLHGELTVPFALTVLCEVIGVPPQRRAELTTLLAG---IAKL---D--DR-------  188 (404)
T ss_dssp             HHHHHHHHHHHHHH----TCSSEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHH---HTBS---S--CH-------
T ss_pred             HHHHHHHHHHHHHh----cCCCeeHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH---HHhc---c--Cc-------
Confidence            99999999999974    45689998655 4688877   22221    122222111   1110   0  00       


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCc
Q 048482          147 LSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGT  226 (403)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~  226 (403)
                       +    +..++...+.+++.++|+++++..            .+|+++.| +   +   + .++++++++++..+++||+
T Consensus       189 -p----~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~l-~---~---~-~ls~~ei~~~~~~l~~AG~  243 (404)
T 2xbk_A          189 -E----GAVRAQDDLFGYVAGLVEHKRAEP------------GPDIISRL-N---D---G-ELTEDRVAHLAMGLLFAGL  243 (404)
T ss_dssp             -H----HHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHH-H---S---S-SCCHHHHHHHHHHHHHHTT
T ss_pred             -H----HHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHh-h---c---C-CCCHHHHHHHHHHHHHhch
Confidence             1    456677888999999999988652            46899988 2   1   2 7999999999999999999


Q ss_pred             cchHHHHHHHHHHHhhChhhHHHHHHHHHHH---hcCCCcCChhhccCCC--cceEEE---EeecccccCCCcEEEEehh
Q 048482          227 DTTATTLEWAMAELVKNPTSMKRAREEVRSV---AKGKLNIDMKDIEKMD--YLKCVS---VRWRDYNILAKTRVIVNAW  298 (403)
Q Consensus       227 ~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~---~~~~~~~~~~~~~~lp--~l~a~i---~~~~g~~ip~Gt~v~~~~~  298 (403)
                      |||+.+++|++++|++||++|+||++|++.+   +.+    +..-..-.|  .+..+.   ++++||.|||||.|+++.+
T Consensus       244 dTta~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~  319 (404)
T 2xbk_A          244 DSVASIMDNGVVLLAAHPDQRAAALADPDVMARAVEE----VLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLG  319 (404)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHH----HHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTH
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHHH----HHHhCCCccccccceeECCCeeECCEEECCCCEEEeChH
Confidence            9999999999999999999999999997532   221    111112222  222222   7889999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCcc
Q 048482          299 AIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLN  377 (403)
Q Consensus       299 ~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~  377 (403)
                      ++||||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++..  .  
T Consensus       320 ~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~--  385 (404)
T 2xbk_A          320 LPNFDERAFTGPEEFDAARTP----------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVE--Q--  385 (404)
T ss_dssp             HHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--
T ss_pred             HhcCChhhCCCccccCCCCCC----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCC--c--
Confidence            999999999999999999983          3589999999999999999999999999999999 798865421  1  


Q ss_pred             ccccCCcccccCCCceee
Q 048482          378 MFEVNGLVVHKKLPLHPV  395 (403)
Q Consensus       378 ~~~~~~~~~~~~~~~~v~  395 (403)
                      +....+.++.....++|+
T Consensus       386 ~~~~~~~~~~~~~~lpv~  403 (404)
T 2xbk_A          386 LRLKEGQLSGGFAELRVV  403 (404)
T ss_dssp             CCBCSSBTTCCBSCCEEE
T ss_pred             ceeccCcccCCcceeeee
Confidence            222345555666677765


No 68 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=4.7e-48  Score=364.31  Aligned_cols=341  Identities=16%  Similarity=0.135  Sum_probs=244.7

Q ss_pred             cccCCHHHHHHHHHhccccccCCCC-CCc-----cceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHH
Q 048482            4 NYHMHDFSTCEMFKTHDIVISNRPK-TTP-----ANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDG   77 (403)
Q Consensus         4 ~~l~dp~~~k~vl~~~~~~f~~r~~-~~~-----~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~   77 (403)
                      +++++++.+++||.++.  |..... ...     .........+.++..+|+.|+++||++ ++.|+++.++.+.+.+++
T Consensus        57 ~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~  133 (416)
T 3p3o_A           57 LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADHRRLRGLA-THPFTPRRITAVQPFVRS  133 (416)
T ss_dssp             EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHHHHHHHHTT-CGGGSHHHHHHHHHHHHH
T ss_pred             eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHH
Confidence            79999999999997653  332211 000     000000012345555699999999998 899999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeHHH-HHHHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHH
Q 048482           78 EVSSLITKIRLSCFNKGSPLNLLE-MLLIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGR  153 (403)
Q Consensus        78 ~~~~li~~l~~~~~~~~~~vd~~~-~~~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  153 (403)
                      .++++++.| .    .+ .+|+.. ....+++++   .|+...+-.+.+..+...+..     .+....    .....++
T Consensus       134 ~~~~ll~~l-~----~g-~~d~~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~  198 (416)
T 3p3o_A          134 TVEQLIDKL-P----QG-DFDFVQHFPHPLPALVMCQLLGFPLEDYDTVGRLSIETNL-----GLALSN----DQDILVK  198 (416)
T ss_dssp             HHHHHHHTC-C----SS-SEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHTTCG-----GGTTCS----CHHHHHH
T ss_pred             HHHHHHHhh-c----cC-CccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh-----hccccc----chhhHHH
Confidence            999999999 3    33 488654 445677777   223222211222222221111     111000    1234566


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHH
Q 048482          154 LNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTL  233 (403)
Q Consensus       154 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l  233 (403)
                      ..++.+.+.+++.++|+++++..            .+|+++.|++...++    .++++++++++..+++||+|||++++
T Consensus       199 ~~~~~~~l~~~~~~~i~~rr~~~------------~~dll~~ll~~~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l  262 (416)
T 3p3o_A          199 VEQGLGRMFDYLVAAIEKRKVEP------------GDDLTSDIVRAFHDG----VLDDYELRTLVATVLVAGYETTNHQL  262 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC------------CccHHHHHHHhhccC----CCCHHHHHHHHHHHHHhhccHHHHHH
Confidence            77888999999999999998763            679999999887654    79999999999999999999999999


Q ss_pred             HHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCC-CcceEEE---EeecccccCCCcEEEEehhhhhcCCCC
Q 048482          234 EWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKM-DYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQG  306 (403)
Q Consensus       234 ~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~l-p~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~  306 (403)
                      +|++++|++||++|+||++|++-   ++.+    +..-..-. +.+.-+.   ++++|+.||||+.|+++.+++||||++
T Consensus       263 ~~~l~~L~~~P~~~~~l~~e~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~  338 (416)
T 3p3o_A          263 ALAMYDFAQHPDQWMKIKENPELAPQAVEE----VLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRV  338 (416)
T ss_dssp             HHHHHHHHHCHHHHHHHHHCGGGHHHHHHH----HHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred             HHHHHHHHHCHHHHHHHHhCHHHHHHHHHH----HHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhc
Confidence            99999999999999999999742   2211    01111111 1111122   789999999999999999999999999


Q ss_pred             CCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCcc
Q 048482          307 WDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLV  385 (403)
Q Consensus       307 ~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~  385 (403)
                      |+||++|+|+||.+         ..++|||+|+|.|+|++||++|++++|+.|+++| ++++..+.       ....+..
T Consensus       339 ~~dp~~F~p~R~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-------~~~~~~~  402 (416)
T 3p3o_A          339 FADADRFDITVKRE---------APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI-------TWRHELG  402 (416)
T ss_dssp             CTTTTSCCTTCCCS---------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC-------EECCCTT
T ss_pred             cCCccccCCCCCCC---------CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC-------ceecCCC
Confidence            99999999999742         3589999999999999999999999999999999 58876542       1122333


Q ss_pred             cccCCCceeeecc
Q 048482          386 VHKKLPLHPVPTL  398 (403)
Q Consensus       386 ~~~~~~~~v~~~~  398 (403)
                      +.....++|++.|
T Consensus       403 ~~g~~~lpv~~~p  415 (416)
T 3p3o_A          403 VAGPDALPLRFGA  415 (416)
T ss_dssp             CCCEEECEEEESC
T ss_pred             ccCcceeeEEEec
Confidence            4444466776654


No 69 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=3.3e-47  Score=357.73  Aligned_cols=340  Identities=13%  Similarity=0.097  Sum_probs=229.3

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCc---cceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTP---ANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEV   79 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~---~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~   79 (403)
                      .+++++++.+++||.+ ...|++......   .......+.+.++..+|+.|+++||++ ++.|++++++.+.+.|.+.+
T Consensus        57 ~~~vt~~~~v~~vl~d-~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~  134 (412)
T 4dnj_A           57 VYGVARYAEVYAVLND-PLTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAA  134 (412)
T ss_dssp             EEEECSHHHHHHHHTC-TTTEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHcC-CccccCCCccccccccccccccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHH
Confidence            4789999999999964 345654322111   111112234456666799999999998 89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCceeH-HHHHHHHHhhc-----cC--CchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchH
Q 048482           80 SSLITKIRLSCFNKGSPLNL-LEMLLIASKEE-----NT--GQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLI  151 (403)
Q Consensus        80 ~~li~~l~~~~~~~~~~vd~-~~~~~~~~~~v-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  151 (403)
                      +++++.+..    .++.+|+ .+....+.+.+     ..  ...+.+......+......                   .
T Consensus       135 ~~l~~~~~~----~~~~~D~v~~~~~~~~~~~i~~l~g~~~~~~~~~~~~~~~~~~~~~~-------------------~  191 (412)
T 4dnj_A          135 DAKIDELLA----RGGNIDAIADLAEAYPLSVFPDAMGLKQEGRENLLPYAGLVFNAFGP-------------------P  191 (412)
T ss_dssp             HHHHHHHHH----TTSEEETCCCCCCHHHHHHHHHHHTCCSTTGGGHHHHHHHHHHHTSC-------------------S
T ss_pred             HHHHHhhhc----cCCCceeHHHHHhhhhHhHHHHHcCCchhhhhhhhhhhhcccccccc-------------------c
Confidence            999999975    3445553 23333333333     11  1222333332222221111                   0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHH
Q 048482          152 GRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTAT  231 (403)
Q Consensus       152 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~  231 (403)
                      ....+........+...+.+..++...          .++.+..++....++.   .++++++++++..+++||+|||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~~~---~l~~~e~~~~~~~l~~AG~eTTa~  258 (412)
T 4dnj_A          192 NELRQSAIERSAPHQAYVAEQCQRPNL----------APGGFGACIHAFSDTG---EITPEEAPLLVRSLLSAGLDTTVN  258 (412)
T ss_dssp             SHHHHHHHHTCHHHHHHHHHHTSGGGS----------CTTSHHHHHHHTTTTT---SSCTTHHHHHHHHHHHHSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcc----------ccccchhhhHhhhhcc---chhHHHHHHHHHHHHhccchhHHH
Confidence            011111111222223333333333212          3455666666655543   799999999999999999999999


Q ss_pred             HHHHHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCC
Q 048482          232 TLEWAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWD  308 (403)
Q Consensus       232 ~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~  308 (403)
                      +++|++++|++||++|+||++|...+..--. .......-.+.+.-..   ++++|+.||||+.|+++.+++||||++|+
T Consensus       259 ~l~~~~~~L~~~P~~~~~Lr~~~~~~~~~~e-E~lR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~  337 (412)
T 4dnj_A          259 GIAAAVYCLARFPDEFARLRADPSLARNAFE-EAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWD  337 (412)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHCGGGHHHHHH-HHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSS
T ss_pred             HHHHHHHHHhhCHHHHHHHHhCccccccccc-eeeeecCCcccccccCCCCeEECCccCCCCCeEEeehhhccCChhhCC
Confidence            9999999999999999999987432211000 0000011111221222   88999999999999999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccccccCCcccc
Q 048482          309 RPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMFEVNGLVVH  387 (403)
Q Consensus       309 dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~  387 (403)
                      ||++|+||||.          ..|+|||+|+|.|+|++||++|++++|+.|+++| ++++.++       .....+.++.
T Consensus       338 dP~~F~PeR~~----------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~-------~~~~~~~~~r  400 (412)
T 4dnj_A          338 DPDRYDITRKT----------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP-------LKRRFNNTLR  400 (412)
T ss_dssp             STTSCCTTSCC----------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-------CEEEECSSBE
T ss_pred             CccccCCCCCC----------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC-------CeeecCCCcc
Confidence            99999999973          3589999999999999999999999999999999 8998654       2223455566


Q ss_pred             cCCCceeeecc
Q 048482          388 KKLPLHPVPTL  398 (403)
Q Consensus       388 ~~~~~~v~~~~  398 (403)
                      +...++|+++|
T Consensus       401 g~~~LpV~~tP  411 (412)
T 4dnj_A          401 GLESLPIQLTP  411 (412)
T ss_dssp             EEEECEEEEEE
T ss_pred             CCcceeEEEEe
Confidence            66678888875


No 70 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=2.3e-47  Score=357.36  Aligned_cols=330  Identities=15%  Similarity=0.124  Sum_probs=235.6

Q ss_pred             ccccCCHHHHHHHHHhcccccc-C-CCCC--Cccc--eeec-cccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVIS-N-RPKT--TPAN--ILLY-ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVR   75 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~-~-r~~~--~~~~--~~~~-~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i   75 (403)
                      .++++||+++++||.++  .|+ + ++..  ....  .+.. .+.+++++    .|+++||++ .+.|+++ ++.+.+.+
T Consensus        42 ~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~h~~~R~~~-~~~fs~~-~~~~~~~i  113 (396)
T 1n40_A           42 AWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI----ADAGLRKAV-MKAITPK-APGLEQFL  113 (396)
T ss_dssp             EEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH----HHTTCHHHH-HHHTSSC-STTHHHHH
T ss_pred             EEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH----HHHHHHHHH-HHhhChH-HHHhHHHH
Confidence            57899999999999754  476 5 5432  1111  1111 23444443    999999998 8999999 99999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCch----hhHHHHHHHHHHHhcccccchhhhhhhhhhhh
Q 048482           76 DGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQS----NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVL  147 (403)
Q Consensus        76 ~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  147 (403)
                      .++++++++.|..    .++.+|+...+ ..+++++   .|+..    +.+.+....   .+...   ...|        
T Consensus       114 ~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~---~~~~~---~~~p--------  175 (396)
T 1n40_A          114 RDTANSLLDNLIT----EGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLSI---AFMSS---ADPI--------  175 (396)
T ss_dssp             HHHHHHHHHHHHH----HCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHHHTHHH---HTBCC---SSCC--------
T ss_pred             HHHHHHHHHHHHh----cCCCccHHHHHHHHhHHHHHHHHhCCChhhHHHHHHHHHH---Hhccc---cCCC--------
Confidence            9999999999975    25578987554 4677777   23322    122222211   11110   0001        


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhc-CCCCCCCCHHHHHHHHHHHHhcCc
Q 048482          148 SGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKD-GMLGAELSQDNLKAVILDMFVAGT  226 (403)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~~~~~~s~~~i~~~~~~~~~ag~  226 (403)
                         .++..++...+ +++.++|+    +  .   ..     .+|+++.|++...+ +  +..++++++++++..+++||+
T Consensus       176 ---~~~~~~~~~~~-~~~~~~i~----~--~---~~-----~~dll~~ll~~~~~~~--~~~l~~~~i~~~~~~~~~AG~  235 (396)
T 1n40_A          176 ---PAAKINWDRDI-EYMAGILE----N--P---NI-----TTGLMGELSRLRKDPA--YSHVSDELFATIGVTFFGAGV  235 (396)
T ss_dssp             ---HHHHHHHHHHH-HHHHHHHH----C--T---TC-----CSHHHHHHHHHHTSGG--GTTSCHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHH-HHHHHHHh----C--C---CC-----CCCHHHHHHHhhcccc--cCCCCHHHHHHHHHHHHHHhh
Confidence               13455566666 77777776    1  1   12     57999999987522 1  237999999999999999999


Q ss_pred             cchHHHHHHHHHHHhhChhhHHHHHHHHHH---HhcCCCcCChhhccCCC-cceEEE---EeecccccCCCcEEEEehhh
Q 048482          227 DTTATTLEWAMAELVKNPTSMKRAREEVRS---VAKGKLNIDMKDIEKMD-YLKCVS---VRWRDYNILAKTRVIVNAWA  299 (403)
Q Consensus       227 ~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~---~~~~~~~~~~~~~~~lp-~l~a~i---~~~~g~~ip~Gt~v~~~~~~  299 (403)
                      |||+.+++|++++|++||++|+||++|++.   ++.+    +..-..-.| .+..+.   ++++||.|||||.|+++.++
T Consensus       236 dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~l~a~i~E----~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~  311 (396)
T 1n40_A          236 ISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEE----LLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEG  311 (396)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHCGGGHHHHHHH----HHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHH
T ss_pred             hhHHHHHHHHHHHHHcChHHHHHHHhCHHHHHHHHHH----HHhhCCCcccccceecCCCeeECCEEECCCCEEEechHH
Confidence            999999999999999999999999999642   2221    111111122 111222   78899999999999999999


Q ss_pred             hhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCccc
Q 048482          300 IQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNM  378 (403)
Q Consensus       300 ~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~  378 (403)
                      +||||++|+||++|+||||.+         ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++..  .  +
T Consensus       312 ~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~--~  378 (396)
T 1n40_A          312 ANFDPEHFPNPGSIELDRPNP---------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPID--Q--L  378 (396)
T ss_dssp             HHTCTTTSSSTTSCCTTCSST---------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--G--C
T ss_pred             hhCChhhCCChhhCCCCCCCC---------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCcc--c--c
Confidence            999999999999999999963         3589999999999999999999999999999999 599865421  1  2


Q ss_pred             cccCCcccccCCCceee
Q 048482          379 FEVNGLVVHKKLPLHPV  395 (403)
Q Consensus       379 ~~~~~~~~~~~~~~~v~  395 (403)
                      ....+.+......++|+
T Consensus       379 ~~~~~~~~~~~~~lpv~  395 (396)
T 1n40_A          379 VWRTRFQRRIPERLPVL  395 (396)
T ss_dssp             CBCCSBSBCCBSCCEEE
T ss_pred             ccccccccCCcceeeee
Confidence            22345555666677765


No 71 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=4.5e-46  Score=349.52  Aligned_cols=324  Identities=13%  Similarity=0.115  Sum_probs=238.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .+++++++.+++||. +...|+++......... ..+...+...++++|+++||++ ++.|++++++.+.+.|++.++++
T Consensus        63 ~W~vtr~~dv~~vl~-d~~~fs~~~~~~~~~~~-~~~~~~~~~~D~p~H~r~Rrll-~~~Fs~~~l~~~~~~i~~~~~~l  139 (417)
T 4dxy_A           63 HWIATNGDTVKEVYS-DPTRFSSEVIFLPKEAG-EKAQMVPTKMDPPEHTPYRKAL-DKGLNLAKIRKVEDKVREVASSL  139 (417)
T ss_dssp             EEEECSHHHHHHHHT-CTTTEESSCCSSSTTSS-CSSCTTTTTCCTTTHHHHHHHH-HHHHCHHHHHTTHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHc-CchhccCCCcccccccc-cccccCcccCCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHH
Confidence            368999999999996 44578765443222211 1123445556799999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNATA  158 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  158 (403)
                      ++.|..     ++.+|+...+ ..+...+   .++...+-...+..+...+.....  ..+        ........++.
T Consensus       140 ld~l~~-----~g~~D~v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~  204 (417)
T 4dxy_A          140 IDSFAA-----RGECDFAAEYAELFPVHVFMALADLPLEDIPVLSEYARQMTRPEG--NTP--------EEMATDLEAGN  204 (417)
T ss_dssp             HHHHHT-----TSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCC--SSH--------HHHHHHHHHHH
T ss_pred             HHHhhh-----cCCeeeHHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhccccc--cCh--------HHHHHHHHHHH
Confidence            999973     3467764433 3344444   222221111122222221111000  000        12345566777


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHHHHHH
Q 048482          159 RAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLEWAMA  238 (403)
Q Consensus       159 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~~~l~  238 (403)
                      ..+.+++.++|+++++..            .+|+++.|+....++.   .++++++.+++..+++||+|||+++++|+++
T Consensus       205 ~~~~~~~~~li~~rr~~~------------~ddl~s~L~~~~~~~~---~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~  269 (417)
T 4dxy_A          205 NGFYAYVDPIIRARVGGD------------GDDLITLMVNSEINGE---RIAHDKAQGLISLLLLGGLDTVVNFLSFFMI  269 (417)
T ss_dssp             HHHHHHHHHHHHHHTTCC------------CCSHHHHHHTCEETTE---ECCHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCC------------ccchhhhhccccccCC---ccchhHHHHHHHHHHhhcccchhhHHHHHHH
Confidence            888899999999887653            6789999998766553   7999999999999999999999999999999


Q ss_pred             HHhhChhhHHHHHHHHHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCCCCCCC
Q 048482          239 ELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLS  315 (403)
Q Consensus       239 ~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~P  315 (403)
                      +|++||++|+++++|...+.........  ....+.+.-+.   ++++|+.||||+.|+++.+++||||++|+||++|+|
T Consensus       270 ~L~~~P~~~~~l~~e~~~~~~avee~~~--~~~~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~Fdp  347 (417)
T 4dxy_A          270 HLARHPELVAELRSDPLKLMRGAEEMFR--RFPVVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDF  347 (417)
T ss_dssp             HHHTCHHHHHHHHHCHHHHHHTHHHHHH--HSCCBEEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCT
T ss_pred             HHHhCchhhhhhccCccccccceeeeec--cccccccccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCC
Confidence            9999999999999998766542110000  00011111111   889999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCC
Q 048482          316 DKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGK  371 (403)
Q Consensus       316 eRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~  371 (403)
                      +|+          +..|+|||+|+|.|+|++||++|++++|+.|+++| ++++.++.
T Consensus       348 eR~----------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~  394 (417)
T 4dxy_A          348 SRR----------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGE  394 (417)
T ss_dssp             TCS----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTC
T ss_pred             CCC----------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCC
Confidence            993          34589999999999999999999999999999999 89987653


No 72 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.7e-46  Score=344.86  Aligned_cols=299  Identities=13%  Similarity=0.109  Sum_probs=221.4

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccceeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPANILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSL   82 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~l   82 (403)
                      .++++||+++++||.++ ..|++++.......   .+.++++ .+|+.|+++||++ ++.|++++++.+.+.++++++++
T Consensus        12 ~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l   85 (343)
T 2rfb_A           12 AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GGISFIT-MDNPEHKEFRDIS-APYFLPSKINDYKDFIEETSNDL   85 (343)
T ss_dssp             EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGG-CCHHHHHHHHHHH-HHHHSHHHHGGGHHHHHHHHHHH
T ss_pred             eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---ccccccc-CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHH
Confidence            36899999999999865 47888763211111   2455554 4699999999998 89999999999999999999999


Q ss_pred             HHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCc----hhhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHH
Q 048482           83 ITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQ----SNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRL  154 (403)
Q Consensus        83 i~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  154 (403)
                      ++.|.        .+|+.+.+ ..+++++   .|+.    .+.+......+   +...     .|.+.       ..++.
T Consensus        86 ~~~l~--------~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~---~~~~-----~p~~~-------~~~~~  142 (343)
T 2rfb_A           86 IKNID--------NKDIISEYAVRLPVNIISKILGIPDSDMPLFKLWSDYI---IGNK-----RDENF-------NYVNN  142 (343)
T ss_dssp             HTTCT--------TSCHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH---HTSC-----CSSHH-------HHHHH
T ss_pred             HHhcc--------ccCHHHHHhhhhhHHHHHHHcCCCHHHHHHHHHHHHHH---hhcc-----Ccchh-------hHHHH
Confidence            98874        58887754 7788877   2332    12232222221   1110     12110       11223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccchHHHHH
Q 048482          155 NATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDTTATTLE  234 (403)
Q Consensus       155 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~tt~~~l~  234 (403)
                       ++.+.+.+++.++|                   .+| ++.|++...++   ..++++++++++..+++||+|||+.+++
T Consensus       143 -~~~~~~~~~~~~~i-------------------~~d-l~~ll~~~~~~---~~l~~~ei~~~~~~~~~AG~dTt~~~l~  198 (343)
T 2rfb_A          143 -RMVSRLLEIFKSDS-------------------HGI-INVLAGSSLKN---RKLTMDEKIKYIMLLIIGGNETTTNLIG  198 (343)
T ss_dssp             -HHHHHHHHHHHSCC-------------------SSH-HHHHHTCBCSS---SBCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHH-------------------hcc-HHHHHhhhcCC---CCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence             44444544444333                   236 88888764332   3699999999999999999999999999


Q ss_pred             HHHHHHhhChhhHHHHHHHHHHHhcCCCcCChhhccCC-CcceEEE---EeecccccCCCcEEEEehhhhhcCCCCCCCC
Q 048482          235 WAMAELVKNPTSMKRAREEVRSVAKGKLNIDMKDIEKM-DYLKCVS---VRWRDYNILAKTRVIVNAWAIQRDPQGWDRP  310 (403)
Q Consensus       235 ~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~l-p~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd~~~~~dp  310 (403)
                      |++++|++||++|+||++|++.++.+.    ..-..-. |.+..+.   ++++||.|||||.|.++.+++||||++|+||
T Consensus       199 ~~l~~L~~~P~~~~~l~~E~~a~i~E~----lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp  274 (343)
T 2rfb_A          199 NMIRVIDENPDIIDDALKNRSGFVEET----LRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEP  274 (343)
T ss_dssp             HHHHHHHHCGGGHHHHHHCHHHHHHHH----HHHSCSBCCBCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSST
T ss_pred             HHHHHHHhCHHHHHHHHcCcHHHHHHH----HhhCcccccccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCc
Confidence            999999999999999999986665432    1111111 2111122   7889999999999999999999999999999


Q ss_pred             CCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCC
Q 048482          311 EDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPL  369 (403)
Q Consensus       311 ~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~  369 (403)
                      ++|+|||+           ..++|||+|+|.|+|++||++|++++|+.|+++|+ +++.+
T Consensus       275 ~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  323 (343)
T 2rfb_A          275 DLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDY  323 (343)
T ss_dssp             TSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCT
T ss_pred             cccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCC
Confidence            99999994           25899999999999999999999999999999996 99866


No 73 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=4.3e-47  Score=352.23  Aligned_cols=329  Identities=16%  Similarity=0.098  Sum_probs=237.4

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCC-----CCcc--ce--eec-cccceecCCCchhhHHHHhHHHHhhchHHHhhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPK-----TTPA--NI--LLY-ECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQ   72 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~-----~~~~--~~--~~~-~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~   72 (403)
                      .++++||+.+++||.+. ..|++++.     ....  ..  +.. .|.++++ .+|+.|+++||++ .+.|+++.++.+.
T Consensus        20 ~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~h~~~R~~~-~~~f~~~~~~~~~   96 (368)
T 1io7_A           20 IWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLT-SDPPLHDELRSMS-ADIFSPQKLQTLE   96 (368)
T ss_dssp             CEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGG-CCTTHHHHHHGGG-TTTTCHHHHHHHH
T ss_pred             EEEEecHHHHHHHHcCc-cccccccccccccccccccccccccccccccccc-CCChHHHHHHHHH-HhhcCHHHHHHHH
Confidence            47899999999999854 47887763     1100  11  111 1244444 4699999999998 8999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCchhhHHHHHHHHHHHhcccccchhhhhhhhhhhhh
Q 048482           73 HVRDGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQSNKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLS  148 (403)
Q Consensus        73 ~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  148 (403)
                      +.++++++++++.| .    .+ .+|+...+ ..+++++   .|+...+-.+   .+.............|         
T Consensus        97 ~~i~~~~~~l~~~l-~----~g-~~d~~~~~~~~~~~~vi~~~~G~~~~~~~---~~~~~~~~~~~~~~~p---------  158 (368)
T 1io7_A           97 TFIRETTRSLLDSI-D----PR-EDDIVKKLAVPLPIIVISKILGLPIEDKE---KFKEWSDLVAFRLGKP---------  158 (368)
T ss_dssp             HHHHHHHHHHHHTC-C----TT-SEEHHHHTTTHHHHHHHHHHHTCCGGGHH---HHHHHGGGCTTSCCCT---------
T ss_pred             HHHHHHHHHHHHHh-h----cC-CccHHHHHHHHHHHHHHHHHhCCCHHHHH---HHHHHHHHHHhccCCh---------
Confidence            99999999999999 4    23 69998866 6788887   2332211111   1222222111000011         


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhcCccc
Q 048482          149 GLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVAGTDT  228 (403)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~ag~~t  228 (403)
                      ...++..++.+.+.+++.+.|     +  .          .+|+++.|++.        .++++++++++..+++||+||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~i-----~--~----------~~d~l~~ll~~--------~l~~~ei~~~~~~l~~AG~dT  213 (368)
T 1io7_A          159 GEIFELGKKYLELIGYVKDHL-----N--S----------GTEVVSRVVNS--------NLSDIEKLGYIILLLIAGNET  213 (368)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHT-----T--S----------SCHHHHHHHTS--------SCCHHHHHHHHHHHHHTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-----C--C----------CCCHHHHHHhc--------cCCHHHHHHHHHHHHHhhhHH
Confidence            112445556667777777666     1  1          56899999975        589999999999999999999


Q ss_pred             hHHHHHHHHHHHhhChhhHHHHHHH--HHHHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhhhcC
Q 048482          229 TATTLEWAMAELVKNPTSMKRAREE--VRSVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAIQRD  303 (403)
Q Consensus       229 t~~~l~~~l~~L~~~p~~q~~l~~E--i~~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~~rd  303 (403)
                      |+.+++|++++|++|| +|+||++|  ++.++.+    +..-..-.|.+..+.   ++++|+.|||||.|.++.+++|||
T Consensus       214 t~~~l~~~l~~L~~~P-~~~~l~~E~~l~a~i~E----~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd  288 (368)
T 1io7_A          214 TTNLISNSVIDFTRFN-LWQRIREENLYLKAIEE----ALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRD  288 (368)
T ss_dssp             HHHHHHHHHHHHHHTT-CHHHHHHHTCHHHHHHH----HHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCh-HHHHHHhcchHHHHHHH----HHHhCcccccCceeeCCCeeECCEEECCCCEEEecHhhhCCC
Confidence            9999999999999999 99999999  2222221    111111222222222   789999999999999999999999


Q ss_pred             CCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcce-eecCCCCccCCccccccC
Q 048482          304 PQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFD-WNLPLGKVEENLNMFEVN  382 (403)
Q Consensus       304 ~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~  382 (403)
                      |++|+||++|+|||+          +..++|||+|+|.|+|++||++|++++|+.|+++|+ +++.+  .  .  +.  .
T Consensus       289 p~~~~dP~~F~PeR~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--~--~--~~--~  350 (368)
T 1io7_A          289 EEVFHDGEKFIPDRN----------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD--T--E--KV--P  350 (368)
T ss_dssp             TTTSTTTTSCCTTCC----------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE--E--E--EC--C
T ss_pred             hhhCCCcceeCCCCC----------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC--c--e--ec--c
Confidence            999999999999993          135899999999999999999999999999999996 99854  1  1  11  2


Q ss_pred             CcccccCCCceeeeccCC
Q 048482          383 GLVVHKKLPLHPVPTLYS  400 (403)
Q Consensus       383 ~~~~~~~~~~~v~~~~r~  400 (403)
                      +.+..+...++|++++|+
T Consensus       351 ~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          351 NEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             CSSBCCEEEEEEEEEC--
T ss_pred             CCcccCCceeEEEeccCC
Confidence            344555668999999885


No 74 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=4e-46  Score=345.33  Aligned_cols=323  Identities=13%  Similarity=0.113  Sum_probs=239.2

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCC--cc-----c-eeecc---ccceecCCCchhhHHHHhHHHHhhchHHHhhhh
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTT--PA-----N-ILLYE---CQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSF   71 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~--~~-----~-~~~~~---~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~   71 (403)
                      .+++++|+.+++||.++ ..|++++...  ..     . .+. +   +.+++++ +|+.|+++||++ ++.|+++.++. 
T Consensus        20 ~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~-   94 (367)
T 3b4x_A           20 VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFF-DIPTRYTMLTS-DPPLHDELRNLT-ADAFNPSNLPV-   94 (367)
T ss_dssp             SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCC-CCGGGSSGGGC-CTTHHHHHHHTT-GGGGSGGGSCH-
T ss_pred             EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchh-hcccccccccC-CchhHHHHHHHH-HHhcCHhhhcc-
Confidence            46899999999999855 4788775321  11     1 111 1   1455554 699999999998 89999999988 


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc---cCCc---hhhHHHHHHHHHHHhcccccchhhhhhhhh
Q 048482           72 QHVRDGEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE---NTGQ---SNKFGELLRRLEEQFAAFCVGDTFLFLGCL  144 (403)
Q Consensus        72 ~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  144 (403)
                       +.+++.++++++.|.      + .+|+...+ ..+++++   .|+.   .+.+......+...+.      ..|     
T Consensus        95 -~~i~~~~~~l~~~l~------g-~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~------~~p-----  155 (367)
T 3b4x_A           95 -DFVREVTVKLLSELD------E-EFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALRLG------RAD-----  155 (367)
T ss_dssp             -HHHHHHHHHHHHTCC------S-EEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTTT------STT-----
T ss_pred             -hHHHHHHHHHHHhcc------C-CcchHHHHHHhhHHHHHHHHcCCCCcHHHHHHHHHHHHhccC------CCh-----
Confidence             999999999998874      2 49998654 7788887   2232   2223333222221110      011     


Q ss_pred             hhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHhc
Q 048482          145 DVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDDDDQSNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMFVA  224 (403)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~~a  224 (403)
                          ...++. ++...+.+++.++|+++++..            .+|+++.|++.        .++++++++++..+++|
T Consensus       156 ----~~~~~~-~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~--------~ls~~el~~~~~~l~~A  210 (367)
T 3b4x_A          156 ----EIFSIG-RKYLELISFSKKELDSRKGKE------------IVDLTGKIANS--------NLSELEKEGYFILLMIA  210 (367)
T ss_dssp             ----GGGCCC-HHHHHHHHHHHHHHHHHTTTC------------CSSHHHHHHTS--------SSCHHHHHHHHHHHHHT
T ss_pred             ----hhHHHH-HHHHHHHHHHHHHHHHHhcCC------------CCCHHHHHHhc--------cCCHHHHHHHHHHHHHh
Confidence                111222 677788899999998887542            56899999975        58999999999999999


Q ss_pred             CccchHHHHHHHHHHHhhChhhHHHHHHHHH-HHhcCCCcCChhhccCCCcceEEE---EeecccccCCCcEEEEehhhh
Q 048482          225 GTDTTATTLEWAMAELVKNPTSMKRAREEVR-SVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILAKTRVIVNAWAI  300 (403)
Q Consensus       225 g~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~-~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~Gt~v~~~~~~~  300 (403)
                      |+|||+.+++|++++|++ |++|+||++|++ .++.+    +..-..-.|.+..+.   ++++|+.|||||.|+++.+++
T Consensus       211 G~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~~a~i~E----~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~  285 (367)
T 3b4x_A          211 GNETTTNLIGNAIEDFTL-YNSWDYVREKGALKAVEE----ALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASA  285 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHH-TTCHHHHHHHCSHHHHHH----HHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHH
T ss_pred             hhHHHHHHHHHHHHHHhC-HHHHHHHHhCCchHHHHH----HHHhcCcccCeeEEeCCCeEECCEEECCCCEEEEChhhh
Confidence            999999999999999999 999999999984 22221    111112222222222   789999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecCCCCccCCcccc
Q 048482          301 QRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLPLGKVEENLNMF  379 (403)
Q Consensus       301 ~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~  379 (403)
                      ||||++|+||++|+||||.          ..++|||+|+|.|+|++||++|++++|+.|+++| ++++.++      .+.
T Consensus       286 ~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~------~~~  349 (367)
T 3b4x_A          286 NRDEEVFKDPDSFIPDRTP----------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK------EKI  349 (367)
T ss_dssp             TTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE------EEC
T ss_pred             cCCcccCCCccccCCCCCC----------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc------ccc
Confidence            9999999999999999984          3589999999999999999999999999999999 6998653      122


Q ss_pred             ccCCcccccCCCceeeec
Q 048482          380 EVNGLVVHKKLPLHPVPT  397 (403)
Q Consensus       380 ~~~~~~~~~~~~~~v~~~  397 (403)
                        .+.+......++|++.
T Consensus       350 --~~~~~~~~~~lpv~~~  365 (367)
T 3b4x_A          350 --DNEVLNGYRKLVVRVE  365 (367)
T ss_dssp             --CCSSBCSEEEEEEEEE
T ss_pred             --ccccccCcceEEEEec
Confidence              2344455557777764


No 75 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=1.1e-43  Score=340.83  Aligned_cols=299  Identities=12%  Similarity=0.093  Sum_probs=210.1

Q ss_pred             ceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCCch-
Q 048482           41 GIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQS-  115 (403)
Q Consensus        41 ~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~~-  115 (403)
                      ..++..+|+.|+.+|+++ .+.|+++ ++.+.+.+++.++++++.|.... .+++.+|+.+++..+++++    .|+.. 
T Consensus       109 ~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~-~~~~~vdl~~~~~~~~~~~i~~~~~G~~~  185 (473)
T 3dan_A          109 LSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAEL-AKNGKAAFNDVGEQAAFRFLGRAYFNSNP  185 (473)
T ss_dssp             GGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHSCEECHHHHHHHHHHHHHHHHHSCCG
T ss_pred             eeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh-ccCCcccHHHHHHHHHHHHHHHHHcCCCC
Confidence            345556799999999998 8999984 89999999999999999997632 1356899999999999999    23221 


Q ss_pred             --hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--CCCCCccc
Q 048482          116 --NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSGSDDD--DDQSNKKD  191 (403)
Q Consensus       116 --~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~d  191 (403)
                        .++.+....+...+.   .....|++...  ++              .++..++.+++..........  +....-.|
T Consensus       186 ~~~~~~~~~~~~~~~~~---~~~~~p~~~~~--lp--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (473)
T 3dan_A          186 EETKLGTSAPTLISSWV---LFNLAPTLDLG--LP--------------WFLQEPLLHTFRLPAFLIKSTYNKLYDYFQS  246 (473)
T ss_dssp             GGSTTTTCHHHHHHHHH---HHHHGGGCCCS--CC--------------HHHHHHHHSSSCCCGGGTHHHHHHHHHHHHH
T ss_pred             CchhhhhhHHHHHHHHH---HHhccchhhhc--ch--------------HHHHHHHhhhccchHhhhhhchhhhHHHHHH
Confidence              111111111111110   01111211100  00              111111111110000000000  00000124


Q ss_pred             HHHHHHHhhhcCCCCCCCCHHHHHHHHHHHH-hcCccchHHHHHHHHHHHhh-ChhhHHHHHHHHHHHhcC--CCcCChh
Q 048482          192 FVDILLQLRKDGMLGAELSQDNLKAVILDMF-VAGTDTTATTLEWAMAELVK-NPTSMKRAREEVRSVAKG--KLNIDMK  267 (403)
Q Consensus       192 ~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~q~~l~~Ei~~~~~~--~~~~~~~  267 (403)
                      +++.+++..++.    ++++++++++++.+. ++|++||+.+++|++++|++ ||++|++|++|++.+.+.  +..++++
T Consensus       247 ~~~~ll~~~~~~----~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  322 (473)
T 3dan_A          247 VATPVMEQAEKL----GVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLE  322 (473)
T ss_dssp             HCHHHHHHHHHH----TCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHH
T ss_pred             HHHHHHHhHhhc----CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHH
Confidence            445566654432    799999998887766 88889999999999999999 799999999999999764  3578999


Q ss_pred             hccCCCcceEEE--------------------Eee----cccccCCCcEEEEehhhhhcCCCCCCCCCCCCCcccccccc
Q 048482          268 DIEKMDYLKCVS--------------------VRW----RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLV  323 (403)
Q Consensus       268 ~~~~lp~l~a~i--------------------~~~----~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~  323 (403)
                      ++.+||||+|||                    +++    +||.||||+.|+++.+++||||++|+||++|+|+||++...
T Consensus       323 ~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~  402 (473)
T 3dan_A          323 AIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGE  402 (473)
T ss_dssp             HHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGG
T ss_pred             HHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccCCCcc
Confidence            999999999999                    778    99999999999999999999999999999999999998621


Q ss_pred             CCCCCCccccccC---------CCCCCCCChHHHHHHHHHHHHHHHhcceeecCC
Q 048482          324 DCKSQDFEFISFG---------AGRRGYLGTSFALVEVEYVIANLLYWFDWNLPL  369 (403)
Q Consensus       324 ~~~~~~~~~~~FG---------~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~  369 (403)
                          ....|++||         +|+|.|+|++||.+|++++|+.|+++|++....
T Consensus       403 ----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  453 (473)
T 3dan_A          403 ----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIE  453 (473)
T ss_dssp             ----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             ----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEcc
Confidence                223445555         455999999999999999999999999965443


No 76 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.6e-44  Score=348.53  Aligned_cols=298  Identities=13%  Similarity=0.086  Sum_probs=208.9

Q ss_pred             ceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhhc----cCCch-
Q 048482           41 GIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRDGEVSSLITKIRLSCFNKGSPLNLLEMLLIASKEE----NTGQS-  115 (403)
Q Consensus        41 ~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~~~~li~~l~~~~~~~~~~vd~~~~~~~~~~~v----~~~~~-  115 (403)
                      ..++..+|+.|+++|+++ .+.|++.. +.+.+.+++.++++++.|.... .+++.+|+.+++..+++++    .|+.+ 
T Consensus       127 ~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~-~~~~~vdl~~~~~~~~~~~i~~~~~G~~~  203 (495)
T 3dsk_A          127 LSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKEL-SLKGKADFGGSSDGTAFNFLARAFYGTNP  203 (495)
T ss_dssp             GGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHH-HHHSSEESHHHHHHHHHHHHHHHHHSCCG
T ss_pred             eeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh-ccCCCccHHHHHHHHHHHHHHHHHcCCCc
Confidence            344555799999999998 79998754 8899999999999999997632 1356899999999999999    22211 


Q ss_pred             ------hhHHHHHHHHHHHhcccccchhhhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCCCCC
Q 048482          116 ------NKFGELLRRLEEQFAAFCVGDTFLFLGCLDVLSGLIGRLNATARAIDALLDRVIEEHTNRASSG---SDDDDDQ  186 (403)
Q Consensus       116 ------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~~~~~~~  186 (403)
                            ..+......+...       ...|+...  .++              +++..++.++++.....   .... ..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~-------~~~p~~~~--~~p--------------~~~~~~~~~~~~~~~~~~~~~~~~-~~  259 (495)
T 3dsk_A          204 ADTKLKADAPGLITKWVLF-------NLHPLLSI--GLP--------------RVIEEPLIHTFSLPPALVKSDYQR-LY  259 (495)
T ss_dssp             GGSTTTTCHHHHHHHHHHH-------HHGGGCCC--SSC--------------HHHHHHHHSSSCCCGGGGHHHHHH-HH
T ss_pred             chhhhhhhHHHHHHHHHHH-------hhhhHhHh--ccH--------------HHHHHHHHHhhcccchhhhhhHHH-HH
Confidence                  1222222222211       11111110  001              11111121111100000   0000 00


Q ss_pred             CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHH-hcCccchHHHHHHHHHHHhh-ChhhHHHHHHHHHHHhcCC-Cc
Q 048482          187 SNKKDFVDILLQLRKDGMLGAELSQDNLKAVILDMF-VAGTDTTATTLEWAMAELVK-NPTSMKRAREEVRSVAKGK-LN  263 (403)
Q Consensus       187 ~~~~d~l~~ll~~~~~~~~~~~~s~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~q~~l~~Ei~~~~~~~-~~  263 (403)
                      ..-.+.++.+++...+    .++++++++.+++.++ +||++||+.+++|++++|+. ||++|++|++|++++.+.. ..
T Consensus       260 ~~~~~~~~~ll~~~~~----~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~  335 (495)
T 3dsk_A          260 EFFLESAGEILVEADK----LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGE  335 (495)
T ss_dssp             HHHHHHCHHHHHHHHH----TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCC
Confidence            0011222444544433    2799999998776665 99999999999999999995 9999999999999998753 66


Q ss_pred             CChhhccCCCcceEEE--------------------Eee----cccccCCCcEEEEehhhhhcCCCCCCCCCCCCCcccc
Q 048482          264 IDMKDIEKMDYLKCVS--------------------VRW----RDYNILAKTRVIVNAWAIQRDPQGWDRPEDFLSDKFL  319 (403)
Q Consensus       264 ~~~~~~~~lp~l~a~i--------------------~~~----~g~~ip~Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~  319 (403)
                      ++++++.+||||+|||                    +++    +||.||||+.|+++.+++||||++|+||++|+||||+
T Consensus       336 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl  415 (495)
T 3dsk_A          336 LTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV  415 (495)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTC
T ss_pred             CCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccC
Confidence            8999999999999999                    667    4999999999999999999999999999999999999


Q ss_pred             ccccCCC------CCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcceeecCC
Q 048482          320 NSLVDCK------SQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWFDWNLPL  369 (403)
Q Consensus       320 ~~~~~~~------~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~  369 (403)
                      +.+.+..      .....++|||+|+|.|+|++||.+|++++|+.|+++|++...+
T Consensus       416 ~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  471 (495)
T 3dsk_A          416 GEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE  471 (495)
T ss_dssp             HHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             CCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence            7532110      0112345555566999999999999999999999999986543


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97  E-value=5.4e-32  Score=248.81  Aligned_cols=141  Identities=16%  Similarity=0.092  Sum_probs=109.1

Q ss_pred             HHHHHHHhcCccchHHHHHHHHHHHhhChhhHHHHHHHHH---HHhcCCCcCChhhccCCCcceEEE---EeecccccCC
Q 048482          216 AVILDMFVAGTDTTATTLEWAMAELVKNPTSMKRAREEVR---SVAKGKLNIDMKDIEKMDYLKCVS---VRWRDYNILA  289 (403)
Q Consensus       216 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~---~~~~~~~~~~~~~~~~lp~l~a~i---~~~~g~~ip~  289 (403)
                      +++..+++||+|||+.+++|++++|++||++|++|++|++   .++.+.    ..-..-.+.+..+.   ++++|+.|||
T Consensus       214 ~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~~l~~~i~E~----LR~~pp~~~~~R~a~~d~~l~G~~Ip~  289 (381)
T 2yjn_B          214 DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPAAAQRTVAEV----LRLHPALHLERRTATAEVRLGEHVIGE  289 (381)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--HHHHHHH----HHHSCSCSEEEEEESSCEESSSCEECT
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHHHHHHHhCee----eeecCCCcceeEEECCCeEECCEEECC
Confidence            6788899999999999999999999999999999999953   222210    11111112111111   7899999999


Q ss_pred             CcEEEEehhhhhcCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeecC
Q 048482          290 KTRVIVNAWAIQRDPQGWDRPEDFLSDKFLNSLVDCKSQDFEFISFGAGRRGYLGTSFALVEVEYVIANLLYWF-DWNLP  368 (403)
Q Consensus       290 Gt~v~~~~~~~~rd~~~~~dp~~F~PeRf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~  368 (403)
                      |+.|+++.+++||||++|+||++|+|+||.+         ..++|||+| |.|+|++||++|++++|+.|+++| ++++.
T Consensus       290 G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~---------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~  359 (381)
T 2yjn_B          290 GEEVVVVVAAANRDPEVFAEPDRLDVDRPDA---------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPS  359 (381)
T ss_dssp             TCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC---------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC----
T ss_pred             CCEEEeCHHHHcCCcccCCCccccCCCCCCC---------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEEC
Confidence            9999999999999999999999999999974         359999999 999999999999999999999999 99986


Q ss_pred             CC
Q 048482          369 LG  370 (403)
Q Consensus       369 ~~  370 (403)
                      .+
T Consensus       360 ~~  361 (381)
T 2yjn_B          360 GP  361 (381)
T ss_dssp             -C
T ss_pred             CC
Confidence            54


No 78 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=46.22  E-value=0.78  Score=41.62  Aligned_cols=84  Identities=8%  Similarity=-0.010  Sum_probs=49.5

Q ss_pred             ccccCCHHHHHHHHHhccccccCCCCCCccc------eeeccccceecCCCchhhHHHHhHHHHhhchHHHhhhhhhhHH
Q 048482            3 KNYHMHDFSTCEMFKTHDIVISNRPKTTPAN------ILLYECQGIGFSNYGEYWRQVRKICVLQLLSVRRVQSFQHVRD   76 (403)
Q Consensus         3 ~~~l~dp~~~k~vl~~~~~~f~~r~~~~~~~------~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~   76 (403)
                      .+++++++.+++||.+  ..|++++......      .....+.++++. +|+.|        .+.|+     . .+.|+
T Consensus        80 ~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg~~H--------~~~Ft-----~-~~~i~  142 (381)
T 2yjn_B           80 TWVVADHATARQVLDD--PAFTRATGRTPEWMRAAGAPPAEWAQPFRDV-HAASW--------EGEVP-----D-VGELA  142 (381)
T ss_dssp             CEEECSHHHHHHHHHC--SSEESSCCCCCHHHHHHTCCHHHHTHHHHHH-HHCCC--------CSCCC-----C-CSCHH
T ss_pred             EEEEcCHHHHHHHHcC--CCcCCCcccccccccccccccchhhhhhhhC-Cchhh--------hhccC-----C-hHHHH
Confidence            4789999999999975  4687664321000      011012344444 59999        35666     4 89999


Q ss_pred             HHHHHHHHHHHHhccCCCCceeHHHHH-HHHHhhc
Q 048482           77 GEVSSLITKIRLSCFNKGSPLNLLEML-LIASKEE  110 (403)
Q Consensus        77 ~~~~~li~~l~~~~~~~~~~vd~~~~~-~~~~~~v  110 (403)
                      +.++++++.|.       +.+|+...+ ..+++++
T Consensus       143 ~~~~~ll~~~~-------g~~Dl~~~~a~~l~~~v  170 (381)
T 2yjn_B          143 ESFAGLLPGAG-------ARLDLVGDFAWQVPVQG  170 (381)
T ss_dssp             HHTSTTSCC-------------CCCCCCTHHHHHH
T ss_pred             HHHHHHHHhcc-------CcchHHHHHHHHHHHHH
Confidence            99999999885       246655332 4555555


No 79 
>2gvi_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.87A {Thermoplasma acidophilum} SCOP: d.81.3.1 g.39.1.18
Probab=27.64  E-value=28  Score=28.08  Aligned_cols=20  Identities=5%  Similarity=-0.067  Sum_probs=19.2

Q ss_pred             CCCCChHHHHHHHHHHHHHH
Q 048482          340 RGYLGTSFALVEVEYVIANL  359 (403)
Q Consensus       340 r~C~G~~~A~~~~~~~l~~l  359 (403)
                      |.|||.-++..+...++..|
T Consensus        19 H~CPglaiG~rm~~~Al~~L   38 (204)
T 2gvi_A           19 HKCPYMPMGYRAGSYALKIA   38 (204)
T ss_dssp             SCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHc
Confidence            89999999999999999998


No 80 
>1nrj_A Signal recognition particle receptor alpha subunit homolog; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: d.110.4.4
Probab=25.60  E-value=21  Score=26.58  Aligned_cols=22  Identities=23%  Similarity=0.484  Sum_probs=20.9

Q ss_pred             CCCCChHHHHHHHHHHHHHHHh
Q 048482          340 RGYLGTSFALVEVEYVIANLLY  361 (403)
Q Consensus       340 r~C~G~~~A~~~~~~~l~~ll~  361 (403)
                      ..|.|++||+.++.-++++|+.
T Consensus        18 yn~l~kKf~e~qiN~fIS~Lit   39 (158)
T 1nrj_A           18 YNCLGKKFSEIQINSFISQLIT   39 (158)
T ss_dssp             EETTSCCCCHHHHHHHHHHHHH
T ss_pred             ecccCcchHHHHHHHHHHHHhc
Confidence            4799999999999999999998


No 81 
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=24.79  E-value=71  Score=15.62  Aligned_cols=21  Identities=19%  Similarity=0.137  Sum_probs=18.3

Q ss_pred             CCChHHHHHHHHHHHHHHHhc
Q 048482          342 YLGTSFALVEVEYVIANLLYW  362 (403)
Q Consensus       342 C~G~~~A~~~~~~~l~~ll~~  362 (403)
                      |+...-...|---+|..||++
T Consensus         1 cpss~~sL~EkHkILHrLLQ~   21 (26)
T 3bej_E            1 CPSSHSSLTERHKILHRLLQE   21 (26)
T ss_pred             CCCchhhHHHHHHHHHHHHHc
Confidence            888888889999999999886


No 82 
>2e2s_A Agelenin; cystine knot, presynaptic calcium channel inhibitor, toxin; NMR {Allagelena opulenta}
Probab=24.13  E-value=44  Score=17.79  Aligned_cols=15  Identities=27%  Similarity=0.284  Sum_probs=11.9

Q ss_pred             cccccCCCCCCCCCh
Q 048482          331 EFISFGAGRRGYLGT  345 (403)
Q Consensus       331 ~~~~FG~G~r~C~G~  345 (403)
                      .+..+-.|||-|-|-
T Consensus         8 ~fCn~~sGPrCCsgl   22 (36)
T 2e2s_A            8 RFCNALSGPRCCSGL   22 (36)
T ss_dssp             SCCCSSSSCCBCTTC
T ss_pred             CCcccccCCcccCCC
Confidence            466677899999984


No 83 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=21.00  E-value=39  Score=28.60  Aligned_cols=23  Identities=26%  Similarity=0.463  Sum_probs=18.0

Q ss_pred             CCCcEEEEehhhhhcCCCCCCCC
Q 048482          288 LAKTRVIVNAWAIQRDPQGWDRP  310 (403)
Q Consensus       288 p~Gt~v~~~~~~~~rd~~~~~dp  310 (403)
                      |.||+|+.....-+.||+.|.+|
T Consensus        64 ~~GTLvmPt~t~~~~dp~~w~~p   86 (268)
T 3ijw_A           64 EEGTIIMPTQSSDLSDPKHWSRP   86 (268)
T ss_dssp             TTSEEEEECCCGGGSCGGGCCSS
T ss_pred             CCCeEEEeccccccCChhhhcCC
Confidence            67888877776667799999776


Done!