BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048483
         (99 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
          radiata GN=ARG7 PE=2 SV=1
          Length = 92

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 6  IWCCFKGTDEEYSIPKDVPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEF- 64
          I       +E  S   D PKG++ VYVGE  KRFVI VS L  PLF+ LL +AEE F + 
Sbjct: 8  IRKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYD 67

Query: 65 ATGSKLRIPCNESIFRSILYFASPQ 89
               L IPC+E +F+ I    S Q
Sbjct: 68 HPMGGLTIPCSEDLFQHITSCLSAQ 92


>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 22 DVPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEF-ATGSKLRIPCNESIFR 80
          D PKG++ VYVGE+ KRFVI VS L  P F+ LL +AEE F +      L IPC+E +F+
Sbjct: 16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 81 SI 82
           I
Sbjct: 76 CI 77


>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
          Length = 90

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 22 DVPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEFAT-GSKLRIPCNESIFR 80
          DV KG++ VYVGE+ +RFVI VS L  P F+ LL +AEE F +      L IPC+E +F+
Sbjct: 24 DVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQ 83

Query: 81 SILYF 85
           I  F
Sbjct: 84 HITSF 88


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 22 DVPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEF-ATGSKLRIPCNESIFR 80
          D PKG++ VYVGE+ KRFVI VS +  P F+ LL +AEE F +      L IPC+E +F+
Sbjct: 16 DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 81 SI 82
           I
Sbjct: 76 RI 77


>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
          Length = 92

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 22 DVPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEF-ATGSKLRIPCNESIFR 80
          +VPKG++VVYVG++ +RF+I VS L  P F+ LL++AEE F +      L IPC E  F 
Sbjct: 24 EVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFL 83

Query: 81 SI 82
          ++
Sbjct: 84 TV 85


>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
          Length = 93

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 22 DVPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEF-ATGSKLRIPCNESIFR 80
          DVPKG+  VYVG++ +RF I VS L  P F+ LL +AEE F +      L IPC E  F 
Sbjct: 25 DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFL 84

Query: 81 SI 82
          ++
Sbjct: 85 NV 86


>sp|P18728|ZG53_XENLA Gastrula zinc finger protein XlCGF53.1 (Fragment) OS=Xenopus laevis
           PE=2 SV=1
          Length = 516

 Score = 31.2 bits (69), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 22  DVPKGHVVVYVGEEC-KRFVIKVSLLEHPLFKALLDRAEEAFEFATGSKLRIPCNE 76
           D P G++V+Y+  EC K F  K  L  H    ++    E A+      +   PC+E
Sbjct: 303 DTPTGNIVLYICSECQKHFSTKAGLARHQKTHSVFVGEEHAYGRIHTEEKPFPCSE 358


>sp|Q9JLC8|SACS_MOUSE Sacsin OS=Mus musculus GN=Sacs PE=1 SV=2
          Length = 4582

 Score = 30.8 bits (68), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 19   IPKDVPKGHVVVYVG-EECKRFVIKVSLLEHPLFKALLDRAEEAFEFATGSKLRIPCNE 76
            +P DVPK   ++ +  EE      +++ L+ PLF+   D     FE A   + + P +E
Sbjct: 1751 LPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPATLFEMAKSGQSKKPSDE 1809


>sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protein 13b
            OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
            GN=vps13b PE=2 SV=1
          Length = 3131

 Score = 30.4 bits (67), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 32   VGEECKRFVIKVSLLEHP--LFKALLDRAEEAFEFATGSKLRIPCNESIFRSILYFASPQ 89
            + E   +F +  S+   P  +FK  LD      EF +   L +P NE I   ++YF++PQ
Sbjct: 2183 ISESSGKFCLTKSVTFTPRFVFKNHLDCTVSLREFGSSKVLHLPSNELI--PMMYFSNPQ 2240


>sp|Q12PA3|UVRC_SHEDO UvrABC system protein C OS=Shewanella denitrificans (strain OS217 /
           ATCC BAA-1090 / DSM 15013) GN=uvrC PE=3 SV=1
          Length = 609

 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 22/32 (68%)

Query: 10  FKGTDEEYSIPKDVPKGHVVVYVGEECKRFVI 41
           F G+++++++P D    H+++++ +E  RF I
Sbjct: 509 FGGSEQQFNLPSDSGAFHLILHIRDESHRFAI 540


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.326    0.141    0.460 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,073,894
Number of Sequences: 539616
Number of extensions: 1314558
Number of successful extensions: 3279
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3265
Number of HSP's gapped (non-prelim): 18
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)