Query 048483
Match_columns 99
No_of_seqs 105 out of 623
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 17:15:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048483.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048483hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2nt0a1 b.71.1.2 (A:1-77,A:432 57.8 6.8 0.00049 25.6 4.3 40 4-43 12-53 (143)
2 d1nn7a_ d.42.1.2 (A:) Potassiu 53.5 0.75 5.5E-05 28.6 -1.2 59 28-90 2-62 (105)
3 d1t1da_ d.42.1.2 (A:) Shaker p 47.3 5.1 0.00037 24.4 2.2 59 28-90 3-64 (100)
4 d1unda_ a.14.1.1 (A:) Advillin 44.9 2.8 0.0002 22.0 0.5 18 45-62 1-18 (36)
5 d1y6ia2 a.261.1.1 (A:83-233) M 41.1 0.73 5.3E-05 31.2 -3.0 31 21-53 118-148 (151)
6 d1vi7a2 d.58.11.2 (A:138-208) 40.4 22 0.0016 19.4 4.2 53 36-90 2-62 (71)
7 d2bkfa1 d.15.2.2 (A:1-85) Next 39.6 24 0.0017 21.3 4.5 53 27-81 6-67 (85)
8 d1whza_ d.50.3.2 (A:) Hypothet 38.0 28 0.0021 19.6 4.5 34 25-58 25-60 (70)
9 d3kvta_ d.42.1.2 (A:) akv3.1 v 36.0 2.2 0.00016 26.2 -1.1 59 27-90 3-65 (103)
10 d1ip9a_ d.15.2.2 (A:) Bud emer 35.9 37 0.0027 19.6 4.9 47 28-78 15-70 (85)
11 d1tjya_ c.93.1.1 (A:) AI-2 rec 33.2 23 0.0017 22.7 3.8 31 35-65 2-35 (316)
12 d1zj8a1 d.58.36.1 (A:327-406) 31.4 29 0.0021 19.5 3.7 63 24-87 2-73 (80)
13 d1z3xa2 a.261.1.1 (A:88-235) G 30.8 0.46 3.3E-05 32.2 -5.4 28 22-51 119-146 (148)
14 d1oeyj_ d.15.2.2 (J:) Neutroph 28.8 64 0.0046 20.2 5.5 63 35-97 17-88 (105)
15 d1qusa_ d.2.1.6 (A:) 36 kDa so 27.9 16 0.0012 26.7 2.5 25 43-67 13-37 (322)
16 d1yu5x1 a.14.1.1 (X:10-76) Vil 25.4 8.6 0.00063 22.5 0.4 19 44-62 31-49 (67)
17 d1t2da2 d.162.1.1 (A:151-315) 25.0 43 0.0031 20.8 4.0 32 28-61 126-157 (165)
18 d1b0aa2 c.58.1.2 (A:2-122) Tet 22.8 78 0.0057 19.2 5.2 58 23-91 31-90 (121)
19 d1zavu1 a.108.1.1 (U:1-30) Rib 22.2 30 0.0022 17.1 2.1 18 46-63 13-30 (30)
20 d3d37a1 b.106.1.1 (A:6-178) Ba 21.9 29 0.0021 21.7 2.6 24 49-72 145-171 (173)
21 d1y74b1 a.194.1.1 (B:83-132) P 21.7 11 0.00079 21.0 0.3 13 44-56 26-38 (50)
22 d2c35b2 d.230.1.1 (B:1-77) N-t 20.1 58 0.0042 18.1 3.5 36 37-72 9-46 (77)
No 1
>d2nt0a1 b.71.1.2 (A:1-77,A:432-497) Glucosylceramidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.77 E-value=6.8 Score=25.58 Aligned_cols=40 Identities=18% Similarity=0.347 Sum_probs=26.7
Q ss_pred Cceee-ecCCCCCCCCCCCCCCCCeEEEEEc-CCCeEEEEEc
Q 048483 4 SKIWC-CFKGTDEEYSIPKDVPKGHVVVYVG-EECKRFVIKV 43 (99)
Q Consensus 4 ~~~~c-~~~~~~~~~~~~~~vpkG~~~VYVG-~e~kRfvVp~ 43 (99)
..+-| |.+..-.....+...+.|+|+||+- ....||..-.
T Consensus 12 ~~~VCvCnat~cD~~~~~~~~~~g~f~vy~SsksG~R~~~~~ 53 (143)
T d2nt0a1 12 SSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSM 53 (143)
T ss_dssp SSCEEEECSSCCCBCCCCCCCCTTEEEEEEEETTSCCSEEEE
T ss_pred CCEEEEEeCCcccccCCCCcCCCCeEEEEEEcCCcceEEEEE
Confidence 34566 6665555556777889999999983 3456665433
No 2
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=53.48 E-value=0.75 Score=28.65 Aligned_cols=59 Identities=27% Similarity=0.360 Sum_probs=41.3
Q ss_pred EEEEEcCCCeEEEEEcCcc-CcHHHHHHHHHHHHhcCc-cCCCcEEeccCHHHHHHHHHHhCCCC
Q 048483 28 VVVYVGEECKRFVIKVSLL-EHPLFKALLDRAEEAFEF-ATGSKLRIPCNESIFRSILYFASPQR 90 (99)
Q Consensus 28 ~~VYVG~e~kRfvVp~~~L-~hP~F~~LL~~aeeEfG~-~~~G~L~IPC~~~~Fe~vl~~~~~~~ 90 (99)
+.+-|| .++|.+..+-| ++|.. +|.+......+ +.+|.+-|.-+...|++||.-++++.
T Consensus 2 I~LNVG--G~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~G~ 62 (105)
T d1nn7a_ 2 IVLNVS--GTRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGK 62 (105)
T ss_dssp EEEEET--TEEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSC
T ss_pred EEEEEC--CEEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhcCc
Confidence 567788 59999988866 44431 12222222223 45699999999999999999988664
No 3
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=47.26 E-value=5.1 Score=24.42 Aligned_cols=59 Identities=25% Similarity=0.345 Sum_probs=40.5
Q ss_pred EEEEEcCCCeEEEEEcCccCc-H--HHHHHHHHHHHhcCccCCCcEEeccCHHHHHHHHHHhCCCC
Q 048483 28 VVVYVGEECKRFVIKVSLLEH-P--LFKALLDRAEEAFEFATGSKLRIPCNESIFRSILYFASPQR 90 (99)
Q Consensus 28 ~~VYVG~e~kRfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~G~L~IPC~~~~Fe~vl~~~~~~~ 90 (99)
+.+-|| .++|.+..+-|.. | .+..|.... .+--+.+|.+-|--+...|++||.-++++.
T Consensus 3 I~LNVG--G~~f~t~~~tL~~~p~s~l~~l~~~~--~~~~~~~g~~FiDRdp~~F~~IL~flR~~~ 64 (100)
T d1t1da_ 3 VVINVS--GLRFETQLKTLNQFPDTLLGNPQKRN--RYYDPLRNEYFFDRNRPSFDAILYFYQSGG 64 (100)
T ss_dssp EEEEET--TEEEEEEHHHHHTSTTSTTTCHHHHG--GGEETTTTEEEECSCSTTHHHHHHHHHTTS
T ss_pred EEEEEC--CEEEEEeHHHHhhCCCchhHHHHhCC--CcCCCCCCeEEEecCHHHHHHHHHHHhcCC
Confidence 456788 5999998876643 3 333333221 111245799999999999999999988643
No 4
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.93 E-value=2.8 Score=22.02 Aligned_cols=18 Identities=17% Similarity=0.285 Sum_probs=16.3
Q ss_pred ccCcHHHHHHHHHHHHhc
Q 048483 45 LLEHPLFKALLDRAEEAF 62 (99)
Q Consensus 45 ~L~hP~F~~LL~~aeeEf 62 (99)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999887
No 5
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=41.09 E-value=0.73 Score=31.22 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=19.1
Q ss_pred CCCCCCeEEEEEcCCCeEEEEEcCccCcHHHHH
Q 048483 21 KDVPKGHVVVYVGEECKRFVIKVSLLEHPLFKA 53 (99)
Q Consensus 21 ~~vpkG~~~VYVG~e~kRfvVp~~~L~hP~F~~ 53 (99)
...|+||+|+.-.--.-| +=-+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 357999999854211111 3334889998864
No 6
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.40 E-value=22 Score=19.38 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=38.6
Q ss_pred CeEEEEEcCccCcHHHHHHHHHHH-----HhcCccCCCcEE--ec-cCHHHHHHHHHHhCCCC
Q 048483 36 CKRFVIKVSLLEHPLFKALLDRAE-----EAFEFATGSKLR--IP-CNESIFRSILYFASPQR 90 (99)
Q Consensus 36 ~kRfvVp~~~L~hP~F~~LL~~ae-----eEfG~~~~G~L~--IP-C~~~~Fe~vl~~~~~~~ 90 (99)
+.+|.+.++|=....++.||++.. .+|+ .+=.|+ || -.++.|..-|..+.+++
T Consensus 2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~--~~V~l~v~vp~~~~~~f~~~l~d~t~G~ 62 (71)
T d1vi7a2 2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQ--AFVLLRVALPAAKVAEFSAKLADFSRGS 62 (71)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEES--SSEEEEEEECSSTHHHHHHHHHHHHTTC
T ss_pred ceEEEEEeccccHHHHHHHHHHCCCEEEeeeec--cEEEEEEEECHHHHHHHHHHHHHhCCCc
Confidence 468999999999999999999884 3454 443344 44 25777887777666654
No 7
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.60 E-value=24 Score=21.26 Aligned_cols=53 Identities=11% Similarity=0.207 Sum_probs=37.7
Q ss_pred eEEEEEcCCCeEEEEEcCccCcHHHHHHHHHHHHhcCcc--------CC-CcEEeccCHHHHHH
Q 048483 27 HVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEFA--------TG-SKLRIPCNESIFRS 81 (99)
Q Consensus 27 ~~~VYVG~e~kRfvVp~~~L~hP~F~~LL~~aeeEfG~~--------~~-G~L~IPC~~~~Fe~ 81 (99)
-+-|..|++.+||.|+.. +++.|.+|..+-+.-||.+ .+ --++|.|+.+.=|-
T Consensus 6 tvKvtf~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 6 TLNVTFKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp EEEEEETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred EEEEEECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 345666889999998543 4677889999888888742 23 35889998875444
No 8
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=38.03 E-value=28 Score=19.58 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=25.2
Q ss_pred CCeEEEEEcCCCeEEEEEcC--ccCcHHHHHHHHHH
Q 048483 25 KGHVVVYVGEECKRFVIKVS--LLEHPLFKALLDRA 58 (99)
Q Consensus 25 kG~~~VYVG~e~kRfvVp~~--~L~hP~F~~LL~~a 58 (99)
+|-...|.-.+.++.+||.. =|.-...+.+|++|
T Consensus 25 kGSH~~~~~~~~~~~~v~~~~kei~~gtl~~Ilkqa 60 (70)
T d1whza_ 25 KGGHRLYTHPDGRIVVVPFHSGELPKGTFKRILRDA 60 (70)
T ss_dssp ETTEEEEECTTSCEEEEECSSSSCCHHHHHHHHHHT
T ss_pred CCceeEEEcCCCCEEEcCCCCCccCHHHHHHHHHHh
Confidence 46566777556777777775 47888899999888
No 9
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=36.03 E-value=2.2 Score=26.23 Aligned_cols=59 Identities=17% Similarity=0.296 Sum_probs=41.6
Q ss_pred eEEEEEcCCCeEEEEEcCccCc-H--HHHHHHHHHHHhcCc-cCCCcEEeccCHHHHHHHHHHhCCCC
Q 048483 27 HVVVYVGEECKRFVIKVSLLEH-P--LFKALLDRAEEAFEF-ATGSKLRIPCNESIFRSILYFASPQR 90 (99)
Q Consensus 27 ~~~VYVG~e~kRfvVp~~~L~h-P--~F~~LL~~aeeEfG~-~~~G~L~IPC~~~~Fe~vl~~~~~~~ 90 (99)
.+.+=|| .++|.+..+-|.. | .|..+. .....+ +.+|.+-|--+...|++||.-++++.
T Consensus 3 rI~LNVG--G~~F~t~~~tL~~~~~s~l~~~~---~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~g~ 65 (103)
T d3kvta_ 3 RVIINVG--GIRHETYKATLKKIPATRLSRLT---EGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGK 65 (103)
T ss_dssp EEEEEET--TEEEEEEHHHHTTSCSSTTTTCC---TTSTTEETTTTEEEECSCTTTHHHHHHHHHHSC
T ss_pred EEEEEEC--CEEEEEeHHHHhhCccchhHHHH---cCCCccCCCCCcEEecCCHHHHHHHHHHHccCC
Confidence 4566788 5999999887763 3 332222 222333 34689999999999999999988664
No 10
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.95 E-value=37 Score=19.64 Aligned_cols=47 Identities=13% Similarity=0.205 Sum_probs=33.5
Q ss_pred EEEEEcCCCeEEEEEcCccCcHHHHHHHHHHHHhcCc--------cCC-CcEEeccCHHH
Q 048483 28 VVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEF--------ATG-SKLRIPCNESI 78 (99)
Q Consensus 28 ~~VYVG~e~kRfvVp~~~L~hP~F~~LL~~aeeEfG~--------~~~-G~L~IPC~~~~ 78 (99)
+-|+.+++..||.||.+. .|.+|.++-++-|+- +.+ ..++|-|+.+.
T Consensus 15 VKv~~~~D~~~~~l~~~i----t~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl 70 (85)
T d1ip9a_ 15 IKFYYKDDIFALMLKGDT----TYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQV 70 (85)
T ss_dssp EEECBTTCCEEEEECSCC----CHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHH
T ss_pred EEEEECCcEEEEEeCCCC----CHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHH
Confidence 445558899999999764 388888888887762 223 35678887765
No 11
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=33.20 E-value=23 Score=22.70 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=23.1
Q ss_pred CCeEEEEEcCccCcHHHHHHHHHH---HHhcCcc
Q 048483 35 ECKRFVIKVSLLEHPLFKALLDRA---EEAFEFA 65 (99)
Q Consensus 35 e~kRfvVp~~~L~hP~F~~LL~~a---eeEfG~~ 65 (99)
..+|..+=+..+++|.|+.+.+-+ .+++|++
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 356777778889999999996644 5577764
No 12
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=31.40 E-value=29 Score=19.50 Aligned_cols=63 Identities=14% Similarity=0.069 Sum_probs=40.1
Q ss_pred CCCeEEEEEcCC---CeEEEEEcCccCcHHHHHHHHHHHHhcCc-----cCCCcEEec-cCHHHHHHHHHHhC
Q 048483 24 PKGHVVVYVGEE---CKRFVIKVSLLEHPLFKALLDRAEEAFEF-----ATGSKLRIP-CNESIFRSILYFAS 87 (99)
Q Consensus 24 pkG~~~VYVG~e---~kRfvVp~~~L~hP~F~~LL~~aeeEfG~-----~~~G~L~IP-C~~~~Fe~vl~~~~ 87 (99)
|.-|+=||=-.+ .-|..+|.-.++......|.+.|+ +||- .....|.|+ =+.+..+.|++.++
T Consensus 2 ~~dh~Gv~~q~dG~~~vri~~p~G~it~~ql~~la~ia~-~yg~g~i~lTtrq~l~l~~i~~~~~~~v~~~L~ 73 (80)
T d1zj8a1 2 PIDHVGVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMA-RAGSDRIRFTPYQKLVILDIPDALLDDLIAGLD 73 (80)
T ss_dssp CCCCCEEEECTTSSEEEEEBCBTTEEEHHHHHHHHHHHH-HHTCCCEEECTTSCEEEEEECHHHHHHHHHHHH
T ss_pred CCCcceEeeecCCcEEEEEeccCcEECHHHHHHHHHHHH-HhCCCeEEECCCCcEEEcCCCHHHHHHHHHHHH
Confidence 444555555433 236668888899998888888665 5652 234556666 46677777766654
No 13
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=30.79 E-value=0.46 Score=32.16 Aligned_cols=28 Identities=25% Similarity=0.554 Sum_probs=17.7
Q ss_pred CCCCCeEEEEEcCCCeEEEEEcCccCcHHH
Q 048483 22 DVPKGHVVVYVGEECKRFVIKVSLLEHPLF 51 (99)
Q Consensus 22 ~vpkG~~~VYVG~e~kRfvVp~~~L~hP~F 51 (99)
..|+||+|+.- ..+-+-|=-..|+||.|
T Consensus 119 ~AP~GHLP~~~--~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 119 SAPRGHLPLTN--QLRGVQVLNALLNHPAW 146 (148)
T ss_dssp TSCTTCCSCCC--CTTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCcCC--ccchHHHHHHHhcCccc
Confidence 58999999743 23333344466777765
No 14
>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.76 E-value=64 Score=20.18 Aligned_cols=63 Identities=19% Similarity=0.281 Sum_probs=41.8
Q ss_pred CCeEEEEEcCccCcHHHHHHHHHHHHhcCcc--------CCCcEEeccCHHHHHHHHHHhCCC-CCCCcccc
Q 048483 35 ECKRFVIKVSLLEHPLFKALLDRAEEAFEFA--------TGSKLRIPCNESIFRSILYFASPQ-RDRSWFPF 97 (99)
Q Consensus 35 e~kRfvVp~~~L~hP~F~~LL~~aeeEfG~~--------~~G~L~IPC~~~~Fe~vl~~~~~~-~~~~~~~~ 97 (99)
..|-.-|.-++-..|.|++||..-.++|+=. .+|-|.=-=+-+.-+=++...+.. ...+.|||
T Consensus 17 ~~rDI~veedl~~~P~ykdLl~lmr~~f~~~dIaLNYrD~eGDLIRllddeDv~LMv~~~~~~~s~~~~fPW 88 (105)
T d1oeyj_ 17 TIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPW 88 (105)
T ss_dssp EEEEEEECSCTTCCCCHHHHHHHHHHHHCCSSEEEEEECTTSCEEECCSHHHHHHHHHHCCCCCCTTCBCSS
T ss_pred eeeeEEEccccccCccHHHHHHHHHHHhccceeEeeeecCCCCEEEEcchhhHHHHHHHhccCcccceecce
Confidence 3566778889999999999999999998632 245543333444445555554433 24667776
No 15
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=27.94 E-value=16 Score=26.74 Aligned_cols=25 Identities=12% Similarity=0.247 Sum_probs=22.4
Q ss_pred cCccCcHHHHHHHHHHHHhcCccCC
Q 048483 43 VSLLEHPLFKALLDRAEEAFEFATG 67 (99)
Q Consensus 43 ~~~L~hP~F~~LL~~aeeEfG~~~~ 67 (99)
-+|.+||-+++++++..+++||+..
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~~ 37 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDRQ 37 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCHH
Confidence 4799999999999999999999873
No 16
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.36 E-value=8.6 Score=22.52 Aligned_cols=19 Identities=32% Similarity=0.431 Sum_probs=17.8
Q ss_pred CccCcHHHHHHHHHHHHhc
Q 048483 44 SLLEHPLFKALLDRAEEAF 62 (99)
Q Consensus 44 ~~L~hP~F~~LL~~aeeEf 62 (99)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999987
No 17
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=25.01 E-value=43 Score=20.82 Aligned_cols=32 Identities=28% Similarity=0.246 Sum_probs=24.7
Q ss_pred EEEEEcCCCeEEEEEcCccCcHHHHHHHHHHHHh
Q 048483 28 VVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEA 61 (99)
Q Consensus 28 ~~VYVG~e~kRfvVp~~~L~hP~F~~LL~~aeeE 61 (99)
+||-+|.+.-.=++++. |+ +.=|++|++|++|
T Consensus 126 ~Pv~lg~~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGANGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEETTEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcCCceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 46777887777788887 66 6678889988876
No 18
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=22.85 E-value=78 Score=19.16 Aligned_cols=58 Identities=19% Similarity=0.277 Sum_probs=41.4
Q ss_pred CCCCeEEEEEcCCCeEEEEEcCccCcHHHHHHHHHHHHhcCccCCCcEEec--cCHHHHHHHHHHhCCCCC
Q 048483 23 VPKGHVVVYVGEECKRFVIKVSLLEHPLFKALLDRAEEAFEFATGSKLRIP--CNESIFRSILYFASPQRD 91 (99)
Q Consensus 23 vpkG~~~VYVG~e~kRfvVp~~~L~hP~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~~~~~~~ 91 (99)
.+.+...|+||++. ..-.....-.++.++.|+... .+.+| ++...+..++..+.++.+
T Consensus 31 ~~P~LavI~vg~d~----------aS~~Yv~~k~k~a~~lGi~~~-~~~l~~~~t~~~l~~~I~~lN~d~~ 90 (121)
T d1b0aa2 31 RAPGLAVVLVGSNP----------ASQIYVASKRKACEEVGFVSR-SYDLPETTSEAELLELIDTLNADNT 90 (121)
T ss_dssp CCCEEEEEEESCCH----------HHHHHHHHHHHHHHHHTCEEC-CEEECTTCCHHHHHHHHHHHHTCTT
T ss_pred CCceEEEEEeCCCh----------hHHHHHHHHHHHHHhhcccee-eeeccccccHHHHHHHHHHHhCCCc
Confidence 35688899999653 122456677788899998653 46676 788888888888776654
No 19
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.24 E-value=30 Score=17.15 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=14.3
Q ss_pred cCcHHHHHHHHHHHHhcC
Q 048483 46 LEHPLFKALLDRAEEAFE 63 (99)
Q Consensus 46 L~hP~F~~LL~~aeeEfG 63 (99)
|.-....+|+++-|+.||
T Consensus 13 ltvaelaelvk~ledkfg 30 (30)
T d1zavu1 13 LTVSELAELVKKLEDKFG 30 (30)
T ss_dssp SBHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHhhcC
Confidence 445667899999999987
No 20
>d3d37a1 b.106.1.1 (A:6-178) Baseplate protein gpP {Neisseria meningitidis [TaxId: 487]}
Probab=21.93 E-value=29 Score=21.73 Aligned_cols=24 Identities=17% Similarity=0.188 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHh---cCccCCCcEEe
Q 048483 49 PLFKALLDRAEEA---FEFATGSKLRI 72 (99)
Q Consensus 49 P~F~~LL~~aeeE---fG~~~~G~L~I 72 (99)
..|.-|-+.|+++ |-|++||.|+|
T Consensus 145 Td~~fl~Rla~~~G~~~~~e~dG~Lv~ 171 (173)
T d3d37a1 145 TVWQALTHIANSVGLHPWLEPDGTLVV 171 (173)
T ss_dssp BHHHHHHHHHHHTTCEEEECTTSCEEE
T ss_pred CHHHHHHHHHHHCCCEEEECCCceEEe
Confidence 4455555555543 33678999887
No 21
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.71 E-value=11 Score=21.02 Aligned_cols=13 Identities=46% Similarity=0.777 Sum_probs=11.0
Q ss_pred CccCcHHHHHHHH
Q 048483 44 SLLEHPLFKALLD 56 (99)
Q Consensus 44 ~~L~hP~F~~LL~ 56 (99)
..|+.|.||.||.
T Consensus 26 ~lL~~PH~~aLL~ 38 (50)
T d1y74b1 26 RILTQPHFMALLQ 38 (50)
T ss_dssp HHHHSHHHHHHHH
T ss_pred HHHhCHHHHHHHH
Confidence 3688999999996
No 22
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.09 E-value=58 Score=18.08 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=27.7
Q ss_pred eEEEEEcCccCcHHHHHHHHHHHHhcCc--cCCCcEEe
Q 048483 37 KRFVIKVSLLEHPLFKALLDRAEEAFEF--ATGSKLRI 72 (99)
Q Consensus 37 kRfvVp~~~L~hP~F~~LL~~aeeEfG~--~~~G~L~I 72 (99)
....||.++|+.++-+.|.++..+.|.- ..++++.|
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~egk~~~~~G~~i 46 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVI 46 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHHTTCEETTTEEEE
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHhCCEEeCCCCEEE
Confidence 5678999999999999999999888743 23555544
Done!