BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048503
(374 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
pdb|3HD8|C Chain C, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
Length = 389
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 111/278 (39%), Gaps = 36/278 (12%)
Query: 124 SSGNLATETLTFNSTSG-LPVEMPNV--IFGCGHKNLASPTSDSKQTGIIGLGPGNSSLI 180
++G+L N+T G PV NV + C L + + TG+ GL +L
Sbjct: 95 AAGSLFHTRFAANTTDGNKPVSEVNVRVLAACAPSKLLA-SLPRGSTGVAGLAGSGLALP 153
Query: 181 SQMGTS--IAGKFSYCLPDQGSSKINFGGIVAGAGVVS-----TPLIIRD---HYYLSLE 230
SQ+ ++ + KF CLP G FGG + TPL+ + +Y+S
Sbjct: 154 SQVASAQKVPNKFLLCLPTGGPGVAIFGGGPLPWPQFTQSMDYTPLVAKGGSPAHYISAR 213
Query: 231 AISVGNQRLEFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEP 288
+I V N R+ +TG + + T + LL + + L + + AQP G
Sbjct: 214 SIKVENTRVPISERALATGGVMLSTRLPYVLLRRDVYRPLVDAFTKALAAQPANGAPVAR 273
Query: 289 GFSDV----LCYN---ISSQPK---FPEVTIHFR-GADVKLSPSNLFRNISDEIMCSAF- 336
V LCY+ + + P P V + G+D ++ N ++ C AF
Sbjct: 274 AVKPVAPFELCYDTKTLGNNPGGYWVPNVLLELDGGSDWAMTGKNSMVDVKPGTACVAFV 333
Query: 337 --------RGGNANIVYGRIMQINFLIGYDIEQAMVSF 366
G ++ G +F++ +D+E+ + F
Sbjct: 334 EMKGVDAGDGSAPAVILGGAQMEDFVLDFDMEKKRLGF 371
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At
1.62 Angstroms Resolution
pdb|1AVF|A Chain A, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
pdb|1AVF|J Chain J, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 114/307 (37%), Gaps = 56/307 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y +SIGTPP + DTGS W C C F+P +
Sbjct: 10 MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHS--RFNPSE------- 60
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIF 150
+S S ++S YG G+ F +TLT S +++PN F
Sbjct: 61 ----------SSTYSTNGQTFSLQYGSGSLTGF----FGYDTLTVQS-----IQVPNQEF 101
Query: 151 GCGHKNLASPTSDSKQTGIIGLGPGNSSL---------ISQMGTSIAGKFSYCLPD-QGS 200
G + ++ GI+GL S+ + Q G + FS L + QGS
Sbjct: 102 GLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161
Query: 201 S--KINFGGI---VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGV 255
S + FGG+ + + P+ ++ + +E +G Q + S I VDTG
Sbjct: 162 SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAI-VDTGT 220
Query: 256 LRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGAD 315
+P +Y S L ++ GA+ N +S P +T G +
Sbjct: 221 SLLTVPQQYMSAL------------LQATGAQEDEYGQFLVNCNSIQNLPSLTFIINGVE 268
Query: 316 VKLSPSN 322
L PS+
Sbjct: 269 FPLPPSS 275
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor I
pdb|1T6G|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
pdb|1T6G|B Chain B, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
Length = 381
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 112/283 (39%), Gaps = 46/283 (16%)
Query: 124 SSGNLATETLTFNSTSG-LPVEMPNV--IFGCGHKNLASPTSDSKQTGIIGLGPGNSSLI 180
++G+L+ N+T G PV NV + C L + + TG+ GL +L
Sbjct: 93 AAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLA-SLPRGSTGVAGLANSGLALP 151
Query: 181 SQMGTS--IAGKFSYCLPDQGSSKINFGGIVAGAGVVS----------TPLIIRD---HY 225
+Q+ ++ +A +F CLP G FGG G V TPL+ + +
Sbjct: 152 AQVASAQKVANRFLLCLPTGGPGVAIFGG-----GPVPWPQFTQSMPYTPLVTKGGSPAH 206
Query: 226 YLSLEAISVGNQRLEFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKG 283
Y+S +I VG+ R+ +TG + + T + LL + + L + + AQ G
Sbjct: 207 YISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANG 266
Query: 284 VGAEPGFSDV----LCYNISSQP------KFPEVTIHFR-GADVKLSPSNLFRNISDEIM 332
V +CY+ + P V + G+D ++ N ++
Sbjct: 267 APVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTA 326
Query: 333 CSAF---------RGGNANIVYGRIMQINFLIGYDIEQAMVSF 366
C AF G ++ G +F++ +D+E+ + F
Sbjct: 327 CVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGF 369
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A
pdb|1FQ4|A Chain A, Crystal Structure Of A Complex Between Hydroxyethylene
Inhibitor Cp- 108,420 And Yeast Aspartic Proteinase A
pdb|1FQ5|A Chain A, X-Ray Struture Of A Cyclic Statine Inhibitor Pd-129,541
Bound To Yeast Proteinase A
pdb|1FQ6|A Chain A, X-Ray Structure Of Glycol Inhibitor Pd-133,450 Bound To
Saccharopepsin
pdb|1FQ7|A Chain A, X-Ray Structure Of Inhibitor Cp-72,647 Bound To
Saccharopepsin
pdb|1FQ8|A Chain A, X-Ray Structure Of Difluorostatine Inhibitor Cp81,198
Bound To Saccharopepsin
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 116/311 (37%), Gaps = 60/311 (19%)
Query: 35 YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXXXXXX 94
Y +++GTPP + +DTGS W C L CF +D +
Sbjct: 15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSK--YDHE------------ 60
Query: 95 XQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGH 154
+S+ ++ YG G+ G ++ +TL+ + +P F
Sbjct: 61 -----ASSSYKANGTEFAIQYGTGSL----EGYISQDTLSIGD-----LTIPKQDFAEAT 106
Query: 155 KNLASPTSDSKQTGIIGLGPGNSSLIS---------QMGTSIAGKFSYCLPD-----QGS 200
+ K GI+GLG S+ Q +F++ L D +
Sbjct: 107 SEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENG 166
Query: 201 SKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLR 257
+ FGGI + P+ + ++ + E I +G++ E S +DTG
Sbjct: 167 GEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAA---IDTGTSL 223
Query: 258 TLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVK 317
LP S ++ MI A+ +GA+ G++ + +++ P++ +F G +
Sbjct: 224 ITLP--------SGLAEMINAE----IGAKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFT 271
Query: 318 LSPSNLFRNIS 328
+ P + +S
Sbjct: 272 IGPYDYTLEVS 282
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant
Inhibitor
pdb|1DPJ|A Chain A, The Structure Of Proteinase A Complexed With Ia3 Peptide
Inhibitor
pdb|1FMU|A Chain A, Structure Of Native Proteinase A In P3221 Space Group.
pdb|1FMX|A Chain A, Structure Of Native Proteinase A In The Space Group P21
pdb|1FMX|B Chain B, Structure Of Native Proteinase A In The Space Group P21
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 116/311 (37%), Gaps = 60/311 (19%)
Query: 35 YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXXXXXX 94
Y +++GTPP + +DTGS W C L CF +D +
Sbjct: 15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSK--YDHE------------ 60
Query: 95 XQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGH 154
+S+ ++ YG G+ G ++ +TL+ + +P F
Sbjct: 61 -----ASSSYKANGTEFAIQYGTGSL----EGYISQDTLSIGD-----LTIPKQDFAEAT 106
Query: 155 KNLASPTSDSKQTGIIGLGPGNSSLIS---------QMGTSIAGKFSYCLPD-----QGS 200
+ K GI+GLG S+ Q +F++ L D +
Sbjct: 107 SEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENG 166
Query: 201 SKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLR 257
+ FGGI + P+ + ++ + E I +G++ E S +DTG
Sbjct: 167 GEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAA---IDTGTSL 223
Query: 258 TLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVK 317
LP S ++ MI A+ +GA+ G++ + +++ P++ +F G +
Sbjct: 224 ITLP--------SGLAEMINAE----IGAKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFT 271
Query: 318 LSPSNLFRNIS 328
+ P + +S
Sbjct: 272 IGPYDYTLEVS 282
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In
Complex With Bacillus Subtilis Xylanase
Length = 381
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 112/283 (39%), Gaps = 46/283 (16%)
Query: 124 SSGNLATETLTFNSTSG-LPVEMPNV--IFGCGHKNLASPTSDSKQTGIIGLGPGNSSLI 180
++G+L+ N+T G PV NV + C L + + TG+ GL +L
Sbjct: 93 AAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLA-SLPRGSTGVAGLANSGLALP 151
Query: 181 SQMGTS--IAGKFSYCLPDQGSSKINFGGIVAGAGVVS----------TPLIIRD---HY 225
+Q+ ++ +A +F CLP G FGG G V TPL+ + +
Sbjct: 152 AQVASAQKVANRFLLCLPTGGPGVAIFGG-----GPVPWPQFTQSMPYTPLVTKGGSPAH 206
Query: 226 YLSLEAISVGNQRLEFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKG 283
Y+S +I VG+ R+ +TG + + T + LL + + L + + AQ G
Sbjct: 207 YISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANG 266
Query: 284 VGAEPGFSDV----LCYNISSQP------KFPEVTIHFR-GADVKLSPSNLFRNISDEIM 332
V +CY+ + P V + G+D ++ N ++
Sbjct: 267 APVARAVVAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTA 326
Query: 333 CSAF---------RGGNANIVYGRIMQINFLIGYDIEQAMVSF 366
C AF G ++ G +F++ +D+E+ + F
Sbjct: 327 CVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGF 369
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant,
Mvv
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 115/311 (36%), Gaps = 60/311 (19%)
Query: 35 YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXXXXXX 94
Y +++GTPP + +DTGS W C L CF +D +
Sbjct: 15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSK--YDHE------------ 60
Query: 95 XQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGH 154
+S+ ++ YG G+ G ++ +TL+ + +P F
Sbjct: 61 -----ASSSYKANGTEFAIQYGTGSL----EGYISQDTLSIGD-----LTIPKQDFAEAT 106
Query: 155 KNLASPTSDSKQTGIIGLGPGNSSLIS---------QMGTSIAGKFSYCLPD-----QGS 200
+ K GI+GLG S+ Q +F++ L D +
Sbjct: 107 SEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENG 166
Query: 201 SKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLR 257
+ FGGI + P+ + ++ + E I +G++ E S +DTG
Sbjct: 167 GEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAA---IDTGTSL 223
Query: 258 TLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVK 317
LP S ++ MI A+ +GA+ G + + +++ P++ +F G +
Sbjct: 224 ITLP--------SGLAEMINAE----IGAKKGSTGQYTLDCNTRDNLPDLIFNFNGYNFT 271
Query: 318 LSPSNLFRNIS 328
+ P + +S
Sbjct: 272 IGPYDYTLEVS 282
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of
A Pepsin From Atlantic Cod (Gadus Morhua)
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 127/360 (35%), Gaps = 67/360 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
D Y +SIGTPP DTGS W C C F P++
Sbjct: 10 ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNK--FKPRQ------- 60
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIF 150
+S E + YG G G L +T++ S PN
Sbjct: 61 ----------SSTYVETGKTVDLTYGTGGM----RGILGQDTVSVGGGSD-----PNQEL 101
Query: 151 GCGHKNLASPTSDSKQTGIIGL------GPGNSSLISQMGT-SIAGK--FSYCLPDQGS- 200
G + + GI+GL G + MG+ S+ K FS+ L G+
Sbjct: 102 GESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGAN 161
Query: 201 -SKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVL 256
S++ GG+ + P+ ++ ++L+ I+V Q + VDTG
Sbjct: 162 GSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQT---AACEGCQAIVDTGTS 218
Query: 257 RTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADV 316
+ + P+ +N+ +K +GA +++ N +S P++T G
Sbjct: 219 KIVAPVSALANI------------MKDIGASENQGEMMG-NCASVQSLPDITFTINGVKQ 265
Query: 317 KLSPSNLFRNISDEIMCSAFRGGNAN-------IVYGRIMQINFLIGYDIEQAMVSFKPS 369
L PS D+ C++ G + ++G + N+ YD V F P+
Sbjct: 266 PLPPSAYIEG--DQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA 323
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution
Length = 320
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 118/331 (35%), Gaps = 72/331 (21%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP + DTGS W C C FDP+K
Sbjct: 9 LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHH--RFDPRK------- 59
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTF------NSTSGLPVE 144
+S S YG G+ F L +T+T N T GL E
Sbjct: 60 ----------SSTFRNLGKPLSIHYGTGSMEGF----LGYDTVTVSNIVDPNQTVGLSTE 105
Query: 145 MPNVIFGCGHKNLASPTSDSKQTGIIGLG-PGNSSLIS------QMGTSIAGK--FSYCL 195
P +F + S+ GI+GL P +S S M + + FS +
Sbjct: 106 QPGEVF-----------TYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYM 154
Query: 196 PDQGS-SKINFGGI---VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFV 251
G S + G I + P+ ++ ++ +++++++ + V +
Sbjct: 155 DRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQA--IL 212
Query: 252 DTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEP-GFSDVLCYNISSQPKFPEVTIH 310
DTG S L S+++K Q G G DV C N+ S P V
Sbjct: 213 DTGT----------SVLFGPSSDILKIQMAIGATENRYGEFDVNCGNLRSMPT---VVFE 259
Query: 311 FRGADVKLSPSNLFRNISDEIMC-SAFRGGN 340
G D LSPS D+ C S F+G N
Sbjct: 260 INGRDYPLSPSAY--TSKDQGFCTSGFQGDN 288
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
Length = 413
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 53/291 (18%)
Query: 126 GNLATETLTFNST----SGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLIS 181
G +A + ++ ST SG V +P IF C +L + S G+ GLG +L S
Sbjct: 108 GEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA-SGVVGMAGLGRTRIALPS 166
Query: 182 QMGT--SIAGKFSYCLPDQGSSK--INFGG---------IVAGAGVVSTPLIIRD----- 223
Q + S KF+ CL SS I FG IV+ + TPL+
Sbjct: 167 QFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSA 226
Query: 224 ---------HYYLSLEAISVGNQ-------RLEFVSSSTGNIFVDTGVLRTLLPLEYHSN 267
Y++ +++I + ++ L S+ G + T T+L +
Sbjct: 227 TSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKA 286
Query: 268 L------KSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADV--KLS 319
+ +S N+ + V GA ++L + P P + + + V ++
Sbjct: 287 VTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLG--PSVPSIDLVLQSESVVWTIT 344
Query: 320 PSNLFRNISDEIMCSAFRGGNAN----IVYGRIMQINFLIGYDIEQAMVSF 366
SN I+D ++C G +N IV G + L+ +D+ + V F
Sbjct: 345 GSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGF 395
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
Length = 413
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 53/291 (18%)
Query: 126 GNLATETLTFNST----SGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLIS 181
G +A + ++ ST SG V +P IF C +L + S G+ GLG +L S
Sbjct: 108 GEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA-SGVVGMAGLGRTRIALPS 166
Query: 182 QMGT--SIAGKFSYCLPDQGSSK--INFGG---------IVAGAGVVSTPLIIRD----- 223
Q + S KF+ CL SS I FG IV+ + TPL+
Sbjct: 167 QFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSA 226
Query: 224 ---------HYYLSLEAISVGNQ-------RLEFVSSSTGNIFVDTGVLRTLLPLEYHSN 267
Y++ +++I + ++ L S+ G + T T+L +
Sbjct: 227 TSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKA 286
Query: 268 L------KSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADV--KLS 319
+ +S N+ + V GA ++L + P P + + + V ++
Sbjct: 287 VTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLG--PSVPSIDLVLQSESVVWTIT 344
Query: 320 PSNLFRNISDEIMCSAFRGGNAN----IVYGRIMQINFLIGYDIEQAMVSF 366
SN I+D ++C G +N IV G + L+ +D+ + V F
Sbjct: 345 GSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGF 395
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean
Length = 403
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 107/287 (37%), Gaps = 53/287 (18%)
Query: 126 GNLATETLTFNSTSGLP------VEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSL 179
G L + L ++T G V +P +F C L G+ GLG SL
Sbjct: 109 GELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISL 168
Query: 180 ISQMGTS--IAGKFSYCLPDQGSSKINFGGIVAGAG---------------VVSTPLII- 221
+Q+ + + +F+ CL +SK G I+ G + TPL I
Sbjct: 169 PNQLASHFGLQRQFTTCLSRYPTSK---GAIIFGDAPNNMRQFQNQDIFHDLAFTPLTIT 225
Query: 222 -RDHYYLSLEAISVGNQRLEF---------VSSSTGNIFVDTGVLRTLLPLEYHSNLKSV 271
+ Y + + +I + NQ F V S++G + T +L + V
Sbjct: 226 LQGEYNVRVNSIRI-NQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQV 284
Query: 272 MSNMIKAQP-VKGVGAEPGFSDVLCYNISSQPKFPEVTIHF---RGADVKLSPSNLFRNI 327
+ + Q VK V F LC+N + +P V + G ++S +L
Sbjct: 285 FAQQLPKQAQVKSVAP---FG--LCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQA 339
Query: 328 SDEIMCSAFRGG----NANIVYG-RIMQINFLIGYDIEQAMVSFKPS 369
+ C G A I G R ++ N ++ +D+ ++ V F S
Sbjct: 340 QPGVTCLGVMNGGMQPRAEITLGARQLEENLVV-FDLARSRVGFSTS 385
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|C Chain C, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|E Chain E, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|G Chain G, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
Length = 383
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 58/309 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 59 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 108
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 109 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 158
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 159 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDS 209
Query: 200 SSKINFGGIVAGAGVVSTPLIIRDHY-----YLSLEAISVGNQRLEFVSSSTGNIFVDTG 254
+ + GG + G S P HY Y++L V +++ VS + + + G
Sbjct: 210 ENSQSLGGQIVLGG--SDP----QHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDG 263
Query: 255 VLRTL-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRG 313
L + Y S S + +++A +GA+ D + + P P+++ H G
Sbjct: 264 CLALVDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGG 317
Query: 314 ADVKLSPSN 322
+ L+ ++
Sbjct: 318 KEYTLTSAD 326
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren
pdb|3D91|B Chain B, Human Renin In Complex With Remikiren
pdb|3G6Z|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G6Z|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3K1W|A Chain A, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3K1W|B Chain B, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3OWN|A Chain A, Potent Macrocyclic Renin Inhibitors
pdb|3OWN|B Chain B, Potent Macrocyclic Renin Inhibitors
Length = 341
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 58/309 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 16 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 65
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 66 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 115
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 116 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDS 166
Query: 200 SSKINFGGIVAGAGVVSTPLIIRDHY-----YLSLEAISVGNQRLEFVSSSTGNIFVDTG 254
+ + GG + G S P HY Y++L V +++ VS + + + G
Sbjct: 167 ENSQSLGGQIVLGG--SDP----QHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDG 220
Query: 255 VLRTL-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRG 313
L + Y S S + +++A +GA+ D + + P P+++ H G
Sbjct: 221 CLALVDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGG 274
Query: 314 ADVKLSPSN 322
+ L+ ++
Sbjct: 275 KEYTLTSAD 283
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G24|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2FS4|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2FS4|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1N|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1N|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1R|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1R|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1Y|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1Y|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G20|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G20|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G21|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G21|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|A Chain A, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|B Chain B, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
Length = 333
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 111/305 (36%), Gaps = 50/305 (16%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 9 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 58
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 59 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 108
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 109 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDS 159
Query: 200 SSKINFGGIVAGAGVVSTPLIIR-DHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRT 258
+ + GG + G S P + +Y++L V +++ VS + + + G L
Sbjct: 160 ENSQSLGGQIVLGG--SDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLAL 217
Query: 259 L-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVK 317
+ Y S S + +++A +GA+ D + + P P+++ H G +
Sbjct: 218 VDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGGKEYT 271
Query: 318 LSPSN 322
L+ ++
Sbjct: 272 LTSAD 276
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKS|B Chain B, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKT|A Chain A, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2BKT|B Chain B, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2IKO|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKO|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKU|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IKU|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IL2|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IL2|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2V0Z|C Chain C, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V0Z|O Chain O, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V10|C Chain C, Crystal Structure Of Renin With Inhibitor 9
pdb|2V10|O Chain O, Crystal Structure Of Renin With Inhibitor 9
pdb|2V11|C Chain C, Crystal Structure Of Renin With Inhibitor 6
pdb|2V11|O Chain O, Crystal Structure Of Renin With Inhibitor 6
pdb|2V12|C Chain C, Crystal Structure Of Renin With Inhibitor 8
pdb|2V12|O Chain O, Crystal Structure Of Renin With Inhibitor 8
pdb|1BBS|A Chain A, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1BBS|B Chain B, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1RNE|A Chain A, The Crystal Structure Of Recombinant Glycosylated Human
Renin Alone And In Complex With A Transition State
Analog Inhibitor
pdb|2REN|A Chain A, Structure Of Recombinant Human Renin, A Target For
Cardiovascular- Active Drugs, At 2.5 Angstroms
Resolution
pdb|2V13|A Chain A, Crystal Structure Of Renin With Inhibitor 7
pdb|2V16|C Chain C, Crystal Structure Of Renin With Inhibitor 3
pdb|2V16|O Chain O, Crystal Structure Of Renin With Inhibitor 3
pdb|3G72|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G72|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3OQF|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OQF|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OOT|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OOT|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3Q3T|A Chain A, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3Q3T|B Chain B, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3SFC|A Chain A, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3SFC|B Chain B, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3Q4B|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q4B|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3VSW|A Chain A, Human Renin In Complex With Compound 8
pdb|3VSW|B Chain B, Human Renin In Complex With Compound 8
pdb|3VSX|A Chain A, Human Renin In Complex With Compound 18
pdb|3VSX|B Chain B, Human Renin In Complex With Compound 18
pdb|3VYD|A Chain A, Human Renin In Complex With Inhibitor 6
pdb|3VYD|B Chain B, Human Renin In Complex With Inhibitor 6
pdb|3VYE|A Chain A, Human Renin In Complex With Inhibitor 7
pdb|3VYE|B Chain B, Human Renin In Complex With Inhibitor 7
pdb|3VYF|A Chain A, Human Renin In Complex With Inhibitor 9
pdb|3VYF|B Chain B, Human Renin In Complex With Inhibitor 9
pdb|4GJ8|A Chain A, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ8|B Chain B, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ9|A Chain A, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJ9|B Chain B, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJA|A Chain A, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJA|B Chain B, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJB|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJB|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJC|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJC|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJD|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
pdb|4GJD|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
Length = 340
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 58/309 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 16 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 65
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 66 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 115
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 116 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDS 166
Query: 200 SSKINFGGIVAGAGVVSTPLIIRDHY-----YLSLEAISVGNQRLEFVSSSTGNIFVDTG 254
+ + GG + G S P HY Y++L V +++ VS + + + G
Sbjct: 167 ENSQSLGGQIVLGG--SDP----QHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDG 220
Query: 255 VLRTL-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRG 313
L + Y S S + +++A +GA+ D + + P P+++ H G
Sbjct: 221 CLALVDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGG 274
Query: 314 ADVKLSPSN 322
+ L+ ++
Sbjct: 275 KEYTLTSAD 283
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX
pdb|2I4Q|B Chain B, Human ReninPF02342674 COMPLEX
Length = 336
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 58/309 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 12 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 61
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 62 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 111
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 112 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDS 162
Query: 200 SSKINFGGIVAGAGVVSTPLIIRDHY-----YLSLEAISVGNQRLEFVSSSTGNIFVDTG 254
+ + GG + G S P HY Y++L V +++ VS + + + G
Sbjct: 163 ENSQSLGGQIVLGG--SDP----QHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDG 216
Query: 255 VLRTL-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRG 313
L + Y S S + +++A +GA+ D + + P P+++ H G
Sbjct: 217 CLALVDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGG 270
Query: 314 ADVKLSPSN 322
+ L+ ++
Sbjct: 271 KEYTLTSAD 279
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1HRN|B Chain B, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1BIM|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIM|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|3GW5|A Chain A, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3GW5|B Chain B, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3KM4|A Chain A, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
pdb|3KM4|B Chain B, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
Length = 337
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 111/305 (36%), Gaps = 50/305 (16%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 13 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 62
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 63 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 112
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 113 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDS 163
Query: 200 SSKINFGGIVAGAGVVSTPLIIR-DHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRT 258
+ + GG + G S P + +Y++L V +++ VS + + + G L
Sbjct: 164 ENSQSLGGQIVLGG--SDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLAL 221
Query: 259 L-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVK 317
+ Y S S + +++A +GA+ D + + P P+++ H G +
Sbjct: 222 VDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGGKEYT 275
Query: 318 LSPSN 322
L+ ++
Sbjct: 276 LTSAD 280
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of
Cathepsin E
Length = 351
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 126/330 (38%), Gaps = 68/330 (20%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y +SIG+PP + DTGS W C C F P +
Sbjct: 21 LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHS--RFQPSQ------- 71
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYAS-FSSGNLATETLT-FNSTSGLPVEMPNV 148
+S S+ S+S YG G+ + + ++ E LT G V P
Sbjct: 72 ----------SSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQ 121
Query: 149 IFGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCL--- 195
F D++ GI+GLG P ++++Q + FS +
Sbjct: 122 TF-----------VDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLP-MFSVYMSSN 169
Query: 196 PDQGS-SKINFGGIVA---GAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFV 251
P+ G+ S++ FGG + P+ + ++ ++L+ I VG + F S I V
Sbjct: 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVM-FCSEGCQAI-V 227
Query: 252 DTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHF 311
DTG P + L+ N I A PV G A V C N++ P+VT
Sbjct: 228 DTGTSLITGPSDKIKQLQ----NAIGAAPVDGEYA------VECANLN---VMPDVTFTI 274
Query: 312 RGADVKLSPS--NLFRNISDEIMCSA-FRG 338
G LSP+ L + CS+ F+G
Sbjct: 275 NGVPYTLSPTAYTLLDFVDGMQFCSSGFQG 304
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin
pdb|3VCM|B Chain B, Crystal Structure Of Human Prorenin
Length = 335
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 112/309 (36%), Gaps = 63/309 (20%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTPP DTGS W C L LFD
Sbjct: 16 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD---------- 65
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLAT-ETLTFNSTSGLPVEMPNVI 149
A +S+ + Y G + F S ++ T +T G EMP
Sbjct: 66 -------ASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVTQMFGEVTEMP--- 115
Query: 150 FGCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLPDQG 199
A P ++ G++G+G P ++ISQ G FS+
Sbjct: 116 --------ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYY---- 162
Query: 200 SSKINFGGIVAGAGVVSTPLIIRDHY-----YLSLEAISVGNQRLEFVSSSTGNIFVDTG 254
++ + GG + G S P HY Y++L V +++ VS + + + G
Sbjct: 163 -NRDSLGGQIVLGG--SDP----QHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDG 215
Query: 255 VLRTL-LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRG 313
L + Y S S + +++A +GA+ D + + P P+++ H G
Sbjct: 216 CLALVDTGASYISGSTSSIEKLMEA-----LGAKKRLFDYVV-KCNEGPTLPDISFHLGG 269
Query: 314 ADVKLSPSN 322
+ L+ ++
Sbjct: 270 KEYTLTSAD 278
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex
pdb|2ASI|A Chain A, Aspartic Proteinase
Length = 361
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
Query: 35 YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQE----PPLFDP 81
Y + +SIGTP D DTGS TW P C K E FDP
Sbjct: 20 YAIPVSIGTPGQDFLLLFDTGSSDTW-----VPHKGCTKSEGCVGSRFFDP 65
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And
Refinement At 2.0 Angstroms Resolution Of The Aspartic
Proteinase From Mucor Pusillus
Length = 361
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 35 YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELD-CFKQEPPLFDP 81
Y + +SIGTP D + DTGS TW + C + C + FDP
Sbjct: 20 YAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKR--FFDP 65
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation,
Kinetic Characterization And X-Ray Analysis At
2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf
Chymosin
Length = 323
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKK 83
+D Y + +GTPP + DTGS W C C + FDP+K
Sbjct: 12 LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQR--FDPRK 62
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972
pdb|1CMS|A Chain A, The Three-Dimensional Structure Of Recombinant Bovine
Chymosin At 2.3 Angstroms Resolution
pdb|4CMS|A Chain A, X-Ray Analyses Of Aspartic Proteinases Iv. Structure And
Refinement At 2.2 Angstroms Resolution Of Bovine
Chymosin
pdb|4AA8|A Chain A, Bovine Chymosin At 1.8a Resolution
Length = 323
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKK 83
+D Y + +GTPP + DTGS W C C + FDP+K
Sbjct: 12 LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQR--FDPRK 62
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAD|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3O9L|A Chain A, Design And Optimisation Of New Piperidines As Renin
Inhibitors
pdb|3O9L|C Chain C, Design And Optimisation Of New Piperidines As Renin
Inhibitors
Length = 166
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 19/50 (38%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFD 80
+D Y + IGTPP DTGS W C L LFD
Sbjct: 16 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFD 65
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution
Length = 326
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 114/325 (35%), Gaps = 59/325 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTP D DTGS W C L C F+P+
Sbjct: 10 LDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHN--RFNPED------- 60
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIF 150
+S + S YG G+ +G L +T+ S N IF
Sbjct: 61 ----------SSTYQSTSETVSITYGTGSM----TGILGYDTVQVGGISDT-----NQIF 101
Query: 151 GCGHKNLASPTSDSKQTGIIGLG-PGNSSL--------ISQMGTSIAGKFSYCLP--DQG 199
G S + GI+GL P SS I G FS L DQ
Sbjct: 102 GLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQS 161
Query: 200 SSKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTG-NIFVDTGV 255
S + FGGI + + P+ + ++ +++++I++ E ++ + G VDTG
Sbjct: 162 GSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNG---EAIACAEGCQAIVDTGT 218
Query: 256 LRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGAD 315
P +N++S +GA + + S+ P++ G
Sbjct: 219 SLLTGPTSPIANIQS------------DIGASENSDGDMVVSCSAISSLPDIVFTINGVQ 266
Query: 316 VKLSPSNLFRNISDEIMCSAFRGGN 340
+ PS S+ S F+G N
Sbjct: 267 YPVPPSAYILQ-SEGSCISGFQGMN 290
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With
Pepstatin
pdb|1QRP|E Chain E, Human Pepsin 3a In Complex With A Phosphonate Inhibitor
Iva-Val-Val- Leu(P)-(O)phe-Ala-Ala-Ome
pdb|1PSN|A Chain A, The Crystal Structure Of Human Pepsin And Its Complex With
Pepstatin
pdb|3UTL|A Chain A, Human Pepsin 3b
Length = 326
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 114/325 (35%), Gaps = 59/325 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTP D DTGS W C L C F+P+
Sbjct: 10 LDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHN--RFNPED------- 60
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIF 150
+S + S YG G+ +G L +T+ S N IF
Sbjct: 61 ----------SSTYQSTSETVSITYGTGSM----TGILGYDTVQVGGISDT-----NQIF 101
Query: 151 GCGHKNLASPTSDSKQTGIIGLG-PGNSSL--------ISQMGTSIAGKFSYCLP--DQG 199
G S + GI+GL P SS I G FS L DQ
Sbjct: 102 GLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQS 161
Query: 200 SSKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTG-NIFVDTGV 255
S + FGGI + + P+ + ++ +++++I++ E ++ + G VDTG
Sbjct: 162 GSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNG---EAIACAEGCQAIVDTGT 218
Query: 256 LRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGAD 315
P +N++S +GA + + S+ P++ G
Sbjct: 219 SLLTGPTSPIANIQS------------DIGASENSDGDMVVSCSAISSLPDIVFTINGVQ 266
Query: 316 VKLSPSNLFRNISDEIMCSAFRGGN 340
+ PS S+ S F+G N
Sbjct: 267 YPVPPSAYILQ-SEGSCISGFQGMN 290
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii.
Three-Dimensional Structure Of The Hexagonal Crystal
Form Of Porcine Pepsin At 2.3 Angstroms Resolution
Length = 326
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 107/323 (33%), Gaps = 59/323 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTP D DTGS W C L C F+P
Sbjct: 10 LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQ--FNPDD------- 60
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIF 150
+S S YG G+ +G L +T+ S N IF
Sbjct: 61 ----------SSTFEATSQELSITYGTGSM----TGILGYDTVQVGGISD-----TNQIF 101
Query: 151 GCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLP--DQ 198
G S + GI+GL P +L Q G FS L D
Sbjct: 102 GLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQ-GLVSQDLFSVYLSSNDD 160
Query: 199 GSSKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGV 255
S + GGI + + P+ + ++ ++L++I++ + + S VDTG
Sbjct: 161 SGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETI--ACSGGCQAIVDTGT 218
Query: 256 LRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGAD 315
P +N++S +GA + + SS P++ G
Sbjct: 219 SLLTGPTSAIANIQS------------DIGASENSDGEMVISCSSIASLPDIVFTINGVQ 266
Query: 316 VKLSPSNLFRNISDEIMCSAFRG 338
LSPS D+ S F G
Sbjct: 267 YPLSPSAYILQ-DDDSCTSGFEG 288
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine
Pepsinogen
Length = 370
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 109/324 (33%), Gaps = 61/324 (18%)
Query: 31 VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKXXXXXXX 90
+D Y + IGTP D DTGS W C L C F+P
Sbjct: 54 LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQ--FNPDD------- 104
Query: 91 XXXXXQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIF 150
+S S YG G+ +G L +T+ S N IF
Sbjct: 105 ----------SSTFEATSQELSITYGTGSM----TGILGYDTVQVGGISD-----TNQIF 145
Query: 151 GCGHKNLASPTSDSKQTGIIGLG----------PGNSSLISQMGTSIAGKFSYCLP--DQ 198
G S + GI+GL P +L Q G FS L D
Sbjct: 146 GLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQ-GLVSQDLFSVYLSSNDD 204
Query: 199 GSSKINFGGIVAG---AGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTG-NIFVDTG 254
S + GGI + + P+ + ++ ++L++I++ E ++ S G VDTG
Sbjct: 205 SGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDG---ETIACSGGCQAIVDTG 261
Query: 255 VLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGA 314
P +N++S +GA + + SS P++ G
Sbjct: 262 TSLLTGPTSAIANIQS------------DIGASENSDGEMVISCSSIDSLPDIVFTIDGV 309
Query: 315 DVKLSPSNLFRNISDEIMCSAFRG 338
LSPS D+ S F G
Sbjct: 310 QYPLSPSAYILQ-DDDSCTSGFEG 332
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,096,554
Number of Sequences: 62578
Number of extensions: 464600
Number of successful extensions: 932
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 889
Number of HSP's gapped (non-prelim): 43
length of query: 374
length of database: 14,973,337
effective HSP length: 100
effective length of query: 274
effective length of database: 8,715,537
effective search space: 2388057138
effective search space used: 2388057138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)