Query 048503
Match_columns 374
No_of_seqs 125 out of 1180
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 17:30:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 2.1E-57 7.3E-62 436.8 25.9 302 23-370 46-370 (370)
2 1tzs_A Cathepsin E; hydrolase, 100.0 4.8E-56 1.6E-60 425.1 27.4 303 25-372 15-344 (351)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.3E-57 1.1E-61 436.6 19.4 300 25-370 53-383 (383)
4 3cms_A Chymosin B; hydrolase, 100.0 2.8E-56 9.7E-61 422.0 22.7 300 25-370 6-323 (323)
5 1mpp_A Pepsin; hydrolase(acid 100.0 1.4E-55 4.9E-60 423.5 27.5 306 25-373 10-358 (361)
6 1am5_A Pepsin, acid proteinase 100.0 9.6E-56 3.3E-60 418.6 25.1 298 25-370 4-324 (324)
7 4aa9_A Chymosin; hydrolase, as 100.0 3.2E-56 1.1E-60 421.2 21.6 300 25-370 3-320 (320)
8 1dpj_A Proteinase A; proteinas 100.0 2.5E-55 8.5E-60 416.6 24.6 299 25-370 5-329 (329)
9 1j71_A Candidapepsin, aspartic 100.0 4.2E-55 1.4E-59 415.9 25.7 295 25-373 4-327 (334)
10 3vla_A EDGP; extracellular, in 100.0 7.8E-55 2.7E-59 424.2 26.7 322 28-374 15-409 (413)
11 3fv3_A SAPP1P-secreted asparti 100.0 1.3E-54 4.5E-59 413.4 27.5 299 25-373 4-332 (339)
12 2qzx_A Candidapepsin-5; aspart 100.0 5.9E-55 2E-59 416.2 24.5 298 25-373 4-334 (342)
13 2apr_A Rhizopuspepsin; hydrola 100.0 1.5E-54 5.3E-59 410.4 26.3 298 24-370 6-324 (325)
14 3k1w_A Renin; protease, altern 100.0 2.8E-55 9.7E-60 418.3 21.2 301 24-370 9-340 (341)
15 1htr_B Gastricsin; aspartyl pr 100.0 6.3E-55 2.2E-59 413.8 22.9 299 26-370 6-329 (329)
16 3pvk_A Candidapepsin-2; hydrol 100.0 2E-54 7E-59 412.5 25.2 299 25-373 4-334 (342)
17 3aup_A SBG7S, BG, basic 7S glo 100.0 1E-53 3.4E-58 416.3 30.5 327 25-374 12-397 (403)
18 3c9x_A Trichoderma reesei aspa 100.0 3.1E-54 1.1E-58 409.0 24.3 298 28-369 10-329 (329)
19 1miq_A Plasmepsin; aspartic pr 100.0 2.4E-54 8.4E-59 416.2 22.2 295 25-370 54-374 (375)
20 1oew_A Endothiapepsin; hydrola 100.0 6.4E-54 2.2E-58 406.9 23.8 296 29-369 11-329 (329)
21 1yg9_A Aspartic protease BLA G 100.0 1.7E-53 5.8E-58 404.0 23.0 298 25-370 9-329 (330)
22 1qdm_A Prophytepsin; aspartic 100.0 2.1E-53 7.3E-58 420.6 24.5 311 25-370 44-478 (478)
23 2bju_A Plasmepsin II; aspartic 100.0 4.5E-53 1.5E-57 414.4 23.8 297 25-370 130-450 (453)
24 3qvc_A Histo-aspartic protease 100.0 3.3E-53 1.1E-57 415.8 22.6 297 23-370 127-449 (451)
25 1ibq_A Aspergillopepsin; aspar 100.0 1.6E-52 5.3E-57 396.7 24.4 295 28-370 9-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 1.3E-52 4.3E-57 396.9 23.1 293 29-370 11-323 (323)
27 2ewy_A Beta-secretase 2; BACE2 100.0 1.7E-51 5.7E-56 398.3 27.6 308 26-372 6-357 (383)
28 1bxo_A Protein (penicillopepsi 100.0 2.1E-52 7.2E-57 395.5 20.4 293 28-370 10-323 (323)
29 2qp8_A Beta-secretase 1; BACE1 100.0 5.3E-51 1.8E-55 396.2 26.3 307 29-373 17-370 (395)
30 3lpj_A Beta-secretase 1; alzhe 100.0 4.2E-51 1.5E-55 403.6 26.0 308 29-373 70-423 (455)
31 3vf3_A Beta-secretase 1; struc 100.0 7.8E-51 2.7E-55 396.0 26.9 307 29-373 24-377 (402)
32 1wkr_A Polyporopepsin; hydrola 100.0 7.4E-50 2.5E-54 380.7 25.4 287 26-373 5-336 (340)
33 1t6e_X Xylanase inhibitor; two 100.0 1.2E-49 4.2E-54 384.7 24.2 319 29-374 10-381 (381)
34 1b5f_A Protein (cardosin A); h 100.0 2.8E-40 9.6E-45 299.1 15.8 218 25-273 5-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 4.7E-36 1.6E-40 271.8 18.1 212 143-370 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 4.3E-22 1.5E-26 153.4 8.8 90 25-137 5-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1E-17 3.5E-22 126.5 6.4 76 292-370 4-87 (87)
38 2i1a_A DNA damage-inducible pr 94.4 0.14 4.7E-06 41.4 7.8 102 231-367 30-134 (148)
39 2i1a_A DNA damage-inducible pr 94.2 0.048 1.6E-06 44.2 4.6 34 29-64 21-54 (148)
40 3s8i_A Protein DDI1 homolog 1; 93.7 0.14 4.8E-06 41.5 6.4 103 232-368 29-134 (148)
41 2hs1_A HIV-1 protease; ultra-h 88.0 0.64 2.2E-05 34.8 4.5 28 36-65 10-37 (99)
42 3s8i_A Protein DDI1 homolog 1; 87.7 0.43 1.5E-05 38.6 3.7 40 23-64 13-52 (148)
43 1fmb_A EIAV protease; hydrolas 86.8 0.62 2.1E-05 35.2 3.9 26 36-63 10-35 (104)
44 3ec0_A Protease; HIV-2, inhibi 85.8 0.97 3.3E-05 33.7 4.4 28 36-65 10-37 (99)
45 3liy_A Protease; hydrolase, hy 81.2 1.3 4.5E-05 33.7 3.5 31 36-66 12-45 (116)
46 2hah_A Protease, retropepsin; 79.1 1.7 5.9E-05 33.4 3.6 26 36-64 16-41 (116)
47 3sqf_A Protease; folded monome 75.8 2.6 8.8E-05 32.2 3.7 29 36-66 11-39 (114)
48 3slz_A GAG-Pro-POL polyprotein 74.6 3.6 0.00012 32.4 4.4 28 35-64 23-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 65.5 6.7 0.00023 33.2 4.4 27 36-64 10-36 (203)
50 2rsp_A RSV protease; hydrolase 63.7 6.6 0.00022 30.5 3.7 24 41-66 27-50 (124)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.2 28 0.00096 29.4 4.5 27 36-64 114-140 (203)
52 1lya_A Cathepsin D; lysosomal 38.3 33 0.0011 25.0 3.9 26 231-264 18-45 (97)
53 3c9x_A Trichoderma reesei aspa 28.6 45 0.0015 30.0 4.0 35 31-65 191-231 (329)
54 1b5f_A Protein (cardosin A); h 25.5 65 0.0022 27.5 4.2 33 32-64 187-227 (239)
55 1fmb_A EIAV protease; hydrolas 22.1 65 0.0022 23.9 3.0 35 225-267 6-40 (104)
56 1bxo_A Protein (penicillopepsi 21.0 90 0.0031 27.9 4.4 41 214-265 6-46 (323)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.1e-57 Score=436.82 Aligned_cols=302 Identities=24% Similarity=0.378 Sum_probs=257.9
Q ss_pred cccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCC
Q 048503 23 IYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTS 102 (374)
Q Consensus 23 ~~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 102 (374)
..+++.++.+.+|+++|+||||||+|+|+|||||+++||++..|....| ..++.|||++|+|++...
T Consensus 46 ~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~----------- 112 (370)
T 3psg_A 46 GDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS----------- 112 (370)
T ss_dssp CCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-----------
T ss_pred ceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC-----------
Confidence 3467778899999999999999999999999999999999999986688 678899999999999987
Q ss_pred CCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh---
Q 048503 103 NCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS--- 178 (374)
Q Consensus 103 ~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s--- 178 (374)
+.|.+.|++| + +.|.+++|+|++++ +.++++.||++...... .| ...++||||||+...+
T Consensus 113 ------~~~~i~Yg~G---s-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~-~~~~~~~dGIlGLg~~~~s~~~ 176 (370)
T 3psg_A 113 ------QELSITYGTG---S-MTGILGYDTVQVGG-----ISDTNQIFGLSETEPGS-FLYYAPFDGILGLAYPSISASG 176 (370)
T ss_dssp ------EEEEEESSSC---E-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGCGGG
T ss_pred ------cEEEEEeCCc---e-EEEEEEEEEEeeCC-----cccCCeEEEEEEeeccc-ccccCCccceeccCCccccccC
Confidence 8999999999 7 57999999999999 99999999999988652 34 6788999999998654
Q ss_pred ---hhhhhh---ccccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCC
Q 048503 179 ---LISQMG---TSIAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSST 246 (374)
Q Consensus 179 ---~~~ql~---~~~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 246 (374)
++.+|. .+.+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+.. ...
T Consensus 177 ~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g-~l~~~pv~~~~~w~v~l~~i~v~g~~~~~--~~~ 253 (370)
T 3psg_A 177 ATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTG-SLNWVPVSVEGYWQITLDSITMDGETIAC--SGG 253 (370)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSS-CCEEEECSEETTEEEEECEEESSSSEEEC--TTC
T ss_pred CCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCC-cceeecccccceeEEEEeEEEECCEEEec--CCC
Confidence 333443 34679999999885 579999999 4555 89999999999999999999999988763 567
Q ss_pred CcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEE
Q 048503 247 GNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRN 326 (374)
Q Consensus 247 ~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~ 326 (374)
..+++||||+++++|.+++++|.+++.+. .... +. +.++|+... .+|+|+|+|+|.+++|++++|++.
T Consensus 254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~~~~----g~-~~v~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~ 321 (370)
T 3psg_A 254 CQAIVDTGTSLLTGPTSAIANIQSDIGAS----ENSD----GE-MVISCSSID---SLPDIVFTIDGVQYPLSPSAYILQ 321 (370)
T ss_dssp EEEEECTTCCSEEEEHHHHHHHHHHTTCE----ECTT----CC-EECCGGGGG---GCCCEEEEETTEEEEECHHHHEEE
T ss_pred ceEEEcCCCCcEECCHHHHHHHHHHhCCc----ccCC----Cc-EEEECCCcc---cCCcEEEEECCEEEEECHHHhccc
Confidence 89999999999999999999997776432 2222 33 388999876 799999999999999999999988
Q ss_pred eCCCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 327 ISDEIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 327 ~~~~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
. +..|++ |... +..||||.+|||++|+|||.+++|||||+++
T Consensus 322 -~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 322 -D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp -C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 3 346987 7652 2469999999999999999999999999985
No 2
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.8e-56 Score=425.09 Aligned_cols=303 Identities=26% Similarity=0.390 Sum_probs=255.6
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
.++.++.+.+|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 15 ~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 79 (351)
T 1tzs_A 15 EPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC--KTHSRFQPSQSSTYSQPG------------- 79 (351)
T ss_dssp CTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCBCCS-------------
T ss_pred eeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--CCCCcCCcccCcceEECC-------------
Confidence 45556688999999999999999999999999999999999986689 567899999999999886
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh-----
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS----- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s----- 178 (374)
|.|.+.|++| + +.|.++.|+|.|++ +.++++.||++...... .| ...++||||||+...+
T Consensus 80 ----~~~~i~Yg~G---s-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~ 145 (351)
T 1tzs_A 80 ----QSFSIQYGTG---S-LSGIIGADQVSVEG-----LTVVGQQFGESVTEPGQ-TFVDAEFDGILGLGYPSLAVGGVT 145 (351)
T ss_dssp ----CEEEEESSSC---E-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGSGGGCC
T ss_pred ----CEEEEEeCCC---C-eEEEEEEeEEEECC-----eEECCeEEEEEEecccc-ccccCCCceEEecCCccccccCCC
Confidence 8999999999 7 46999999999998 89999999999987652 33 5678999999998654
Q ss_pred -hhhhhhc---cccCcceecccCC--C--cceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCC
Q 048503 179 -LISQMGT---SIAGKFSYCLPDQ--G--SSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSST 246 (374)
Q Consensus 179 -~~~ql~~---~~~~~Fs~~l~~~--~--~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 246 (374)
++.+|.. +.+++||+||.+. . .|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+.. ...
T Consensus 146 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~~--~~~ 222 (351)
T 1tzs_A 146 PVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSG-SLNWVPVTKQAYWQIALDNIQVGGTVMFC--SEG 222 (351)
T ss_dssp CHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCS-CCEEEECSEETTEEEEEEEEEETTEEEEC--TTC
T ss_pred cHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCC-ceEEEecCCCceEEEEeCEEEECCceEEc--CCC
Confidence 3444443 3679999999886 2 79999999 3445 89999999988999999999999988643 567
Q ss_pred CcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEE
Q 048503 247 GNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRN 326 (374)
Q Consensus 247 ~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~ 326 (374)
..++|||||++++||.+++++|.+++.... . . +. +.++|+... .+|+|+|+|+|.+|+|++++|+++
T Consensus 223 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~-~----g~-~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~yi~~ 289 (351)
T 1tzs_A 223 CQAIVDTGTSLITGPSDKIKQLQNAIGAAP----V-D----GE-YAVECANLN---VMPDVTFTINGVPYTLSPTAYTLL 289 (351)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEE----C-S----SS-EEECGGGGG---GSCCEEEEETTEEEEECTTTSEEC
T ss_pred ceEEeccCCcceeCCHHHHHHHHHHhCCcc----c-C----Ce-EEEeCCCCc---cCCcEEEEECCEEEEECHHHhEee
Confidence 789999999999999999999988875431 1 1 22 367999865 789999999999999999999987
Q ss_pred eCC--CeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCCCC
Q 048503 327 ISD--EIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSRCT 372 (374)
Q Consensus 327 ~~~--~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~ 372 (374)
..+ +..|++ |+.. ++.||||.+|||++|+|||++++|||||+++|.
T Consensus 290 ~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 290 DFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp C-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred ccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 642 457997 8753 368999999999999999999999999999984
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.3e-57 Score=436.57 Aligned_cols=300 Identities=21% Similarity=0.347 Sum_probs=255.2
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPE--LDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTS 102 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~--~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 102 (374)
+++.++.+.+|+++|+||||+|+|+|+|||||+++||++..|.. .+| ..++.|||++|+|++...
T Consensus 53 ~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C--~~~~~y~~~~SsT~~~~~----------- 119 (383)
T 2x0b_A 53 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG----------- 119 (383)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred EeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccc--cCCCCCCCCCCCcEEECC-----------
Confidence 45666789999999999999999999999999999999999963 478 567899999999999887
Q ss_pred CCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh---
Q 048503 103 NCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS--- 178 (374)
Q Consensus 103 ~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s--- 178 (374)
+.|.+.|++| + +.|.+++|+|+|++ +.++ +.||++...... .| ...+|||||||+...+
T Consensus 120 ------~~~~i~Yg~G---s-~~G~~~~Dtv~ig~-----~~v~-~~Fg~a~~~~g~-~f~~~~~dGIlGLg~~~~s~~~ 182 (383)
T 2x0b_A 120 ------TELTLRYSTG---T-VSGFLSQDIITVGG-----ITVT-QMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAIGR 182 (383)
T ss_dssp ------EEEEEECSSC---E-EEEEEEEEEEEETT-----EEEE-EEEEEEEECCHH-HHTTCSSSEEEECSCGGGCGGG
T ss_pred ------cEEEEEcCCc---c-EEEEEEeeEEEEcC-----ceEE-EEEEEEEecCCc-ccccCCCceEeccCCCccccCC
Confidence 8999999999 7 56999999999998 8998 999999987642 23 5688999999998765
Q ss_pred ---hhhhh---hccccCcceecccCC--C----cceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEee
Q 048503 179 ---LISQM---GTSIAGKFSYCLPDQ--G----SSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFV 242 (374)
Q Consensus 179 ---~~~ql---~~~~~~~Fs~~l~~~--~----~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~ 242 (374)
+..+| +.+.+++||+||.+. . .|.|+||| .+.+ ++.|+|+....+|.|.+++|.|+++.+..
T Consensus 183 ~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G-~l~~~pv~~~~~w~v~l~~i~v~~~~~~~- 260 (383)
T 2x0b_A 183 VTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEG-NFHYINLIKTGVWQIQMKGVSVGSSTLLC- 260 (383)
T ss_dssp CCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEE-EEEEEEBSSTTSCEEEECEEEESSCCCBS-
T ss_pred CCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCC-ceEEEEcCCCceEEEEEeEEEeCCceEEc-
Confidence 23333 334679999999876 2 79999999 3444 89999999988999999999999987532
Q ss_pred eCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCc
Q 048503 243 SSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSN 322 (374)
Q Consensus 243 ~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~ 322 (374)
.....+++||||+++++|.+++++|.+++.+. . .. +.+ .++|+... .+|+|+|+|+|.+|+|+|++
T Consensus 261 -~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~-~~----g~~-~v~C~~~~---~~P~i~f~~~g~~~~l~~~~ 326 (383)
T 2x0b_A 261 -EDGCLALVDTGASYISGSTSSIEKLMEALGAK----K-RL----FDY-VVKCNEGP---TLPDISFHLGGKEYTLTSAD 326 (383)
T ss_dssp -TTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----E-CS----SCE-EEEGGGTT---TCCCEEEEETTEEEEECHHH
T ss_pred -CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc----c-cC----CcE-EEeccccc---cCceEEEEECCEEEEECHHH
Confidence 56788999999999999999999998887543 2 22 334 78999865 89999999999999999999
Q ss_pred eEEEeCC--CeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 323 LFRNISD--EIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 323 y~~~~~~--~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
|+++..+ +..|++ |... ++.||||..|||++|+|||++++|||||+++
T Consensus 327 yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 327 YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp HBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9987653 458997 8753 3689999999999999999999999999874
No 4
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.8e-56 Score=422.02 Aligned_cols=300 Identities=21% Similarity=0.372 Sum_probs=255.6
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
+++.++.+++|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 6 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 70 (323)
T 3cms_A 6 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNAC--KNHQRFDPRKSSTFQNLG------------- 70 (323)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE-------------
T ss_pred eeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccc--cCCCCCCCccCCCeEECC-------------
Confidence 46667789999999999999999999999999999999999965588 567899999999999887
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh-----
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS----- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s----- 178 (374)
|.|.+.|++| + +.|.+++|+|++++ +.++++.||++...... .| ...++||||||+...+
T Consensus 71 ----~~~~i~Yg~G---s-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~ 136 (323)
T 3cms_A 71 ----KPLSIHYGTG---S-MQGILGYDTVTVSN-----IVDIQQTVGLSTQEPGD-FFTYAEFDGILGMAYPSLASEYSI 136 (323)
T ss_dssp ----EEEEEEETTE---E-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCSH-HHHHSSCSEEEECSCGGGSCTTCC
T ss_pred ----cEEEEEeCCC---C-eEEEEEEEEEEECC-----eEEeccEEEEEEecccc-cccccCCceEEecCcchhhccCCC
Confidence 8999999999 7 56999999999998 89999999999987541 23 4578999999998654
Q ss_pred -hhhhhhc---cccCcceecccCC-CcceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCcE
Q 048503 179 -LISQMGT---SIAGKFSYCLPDQ-GSSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNI 249 (374)
Q Consensus 179 -~~~ql~~---~~~~~Fs~~l~~~-~~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 249 (374)
++.+|.. +.+++||+||.+. ..|.|+|||. +.+ ++.|+|+....+|.|.+++|.|+++.+.. .....+
T Consensus 137 ~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~~--~~~~~a 213 (323)
T 3cms_A 137 PVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTG-SLHWVPVTVQQYWQFTVDSVTISGVVVAC--EGGCQA 213 (323)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEE-EEEEEECSSBTTBEEEEEEEEETTEEEES--TTCEEE
T ss_pred CHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccC-ceEEEECccCCeEEEEEeeEEECCEEeec--CCCcEE
Confidence 3444443 3679999999876 4599999993 344 89999999888999999999999998764 556789
Q ss_pred EEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC
Q 048503 250 FVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD 329 (374)
Q Consensus 250 iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~ 329 (374)
+|||||+++++|.+++++|.+++... .... +.+ .++|+... .+|+|+|+|+|.+++|+|++|+++ +
T Consensus 214 iiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~----g~~-~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~--~ 279 (323)
T 3cms_A 214 ILDTGTSKLVGPSSDILNIQQAIGAT----QNQY----GEF-DIDCDNLS---YMPTVVFEINGKMYPLTPSAYTSQ--D 279 (323)
T ss_dssp EECTTCCSEEECHHHHHHHHHHHTCE----EETT----TEE-EECTTCTT---TSCCEEEEETTEEEEECHHHHEEE--E
T ss_pred EEecCCccEeCCHHHHHHHHHHhCCe----ecCC----CcE-EEECCCCc---cCceEEEEECCEEEEECHHHhccC--C
Confidence 99999999999999999998887542 2222 333 78999765 799999999999999999999988 4
Q ss_pred CeEEEE-EEcC--CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 330 EIMCSA-FRGG--NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 330 ~~~C~~-i~~~--~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+..|++ |++. ++.||||.+|||++|+|||++++|||||+++
T Consensus 280 ~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 468997 8875 4789999999999999999999999999975
No 5
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.4e-55 Score=423.49 Aligned_cols=306 Identities=18% Similarity=0.295 Sum_probs=260.0
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC-CCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCP-ELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSN 103 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~-~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~ 103 (374)
.++.++.+..|+++|.||||+|+++|+|||||+++||+|..|. ...| ..++.|||++|+|++...
T Consensus 10 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~------------ 75 (361)
T 1mpp_A 10 PGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGC--VGKRFFDPSSSSTFKETD------------ 75 (361)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTC--CSSCCBCGGGCTTCEEEE------------
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccC--CCCCcCCCccCCceEecC------------
Confidence 4556678899999999999999999999999999999999997 5689 567899999999999887
Q ss_pred CCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCC-----CCCC-CCCcceEeecCCCCC
Q 048503 104 CSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLA-----SPTS-DSKQTGIIGLGPGNS 177 (374)
Q Consensus 104 c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~-----~~~~-~~~~~GilGLg~~~~ 177 (374)
+.|.+.|++| + +.|.++.|+|+|++ +.++++.||++..... . .| ...++||||||+...
T Consensus 76 -----~~~~i~Yg~G---s-~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~~~~~-~~~~~~~~GilGLg~~~~ 140 (361)
T 1mpp_A 76 -----YNLNITYGTG---G-ANGIYFRDSITVGG-----ATVKQQTLAYVDNVSGPTAEQS-PDSELFLDGIFGAAYPDN 140 (361)
T ss_dssp -----EEEEEECSSC---E-EEEEEEEEEEEETT-----EEEEEEEEEEEEEEESGGGSSC-TTCSSCCCEEEECSCGGG
T ss_pred -----CeEEEEECCc---e-EEEEEEEEEEEECC-----EEEeceEEEEEEeccCcccccc-ccccCCCCCEEEeCCccc
Confidence 8999999999 7 57999999999998 8999999999998653 2 34 567899999999754
Q ss_pred h------------hhhhhhc---cccCcceecccCC-CcceEEEcC----CCCCCCeeeeeeeeCC----ceeEEEeEEE
Q 048503 178 S------------LISQMGT---SIAGKFSYCLPDQ-GSSKINFGG----IVAGAGVVSTPLIIRD----HYYLSLEAIS 233 (374)
Q Consensus 178 s------------~~~ql~~---~~~~~Fs~~l~~~-~~G~l~~Gg----~~~~~~l~~~p~~~~~----~w~v~l~~i~ 233 (374)
+ ++.+|.. +..++||+||.+. ..|.|+||| ++.+ ++.|+|+.... +|.|.+++|.
T Consensus 141 s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~~~~~v~l~~i~ 219 (361)
T 1mpp_A 141 TAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGG-DIQYTDVLKSRGGYFFWDAPVTGVK 219 (361)
T ss_dssp SHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSS-CCEEEECEEETTEEEEEEEEEEEEE
T ss_pred ccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCC-ceEEEEcccCCCceeEEEEEEeEEE
Confidence 4 3334444 3679999999885 589999999 3445 89999999888 9999999999
Q ss_pred ECCEEEEeeeCCCCcEE-EecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCC-CeEEEEE
Q 048503 234 VGNQRLEFVSSSTGNIF-VDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKF-PEVTIHF 311 (374)
Q Consensus 234 v~~~~~~~~~~~~~~~i-iDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~-P~i~~~f 311 (374)
|+++.+.. .....++ |||||++++||.+++++|.+++.+.. ... ...+.++|+... .+ |.|+|+|
T Consensus 220 v~~~~~~~--~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~----~~~----~g~~~~~C~~~~---~~~p~i~f~f 286 (361)
T 1mpp_A 220 IDGSDAVS--FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA----TES----QQGYTVPCSKYQ---DSKTTFSLVL 286 (361)
T ss_dssp ETTEEEEE--EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC----EEE----TTEEEEEHHHHT---TCCCEEEEEE
T ss_pred ECCeeecc--CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc----cCC----CCcEEEECCCcc---cCCCcEEEEE
Confidence 99988753 3457899 99999999999999999988876532 112 223378999765 67 9999999
Q ss_pred --e-----CceEEECCCceEEEeC-CCeEEEE-EEcC-CCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 312 --R-----GADVKLSPSNLFRNIS-DEIMCSA-FRGG-NANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 312 --~-----g~~~~i~~~~y~~~~~-~~~~C~~-i~~~-~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
+ |.+|+|++++|+++.. ++..|++ |++. ++.||||.+|||++|+|||++++|||||+++|..
T Consensus 287 ~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 287 QKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp ECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred EcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 7 8999999999998875 3568986 8774 5789999999999999999999999999999975
No 6
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=9.6e-56 Score=418.63 Aligned_cols=298 Identities=23% Similarity=0.414 Sum_probs=255.6
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
.++.++.+.+|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 4 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 68 (324)
T 1am5_A 4 EQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQAC--SNHNKFKPRQSSTYVETG------------- 68 (324)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHH--HTSCCBCGGGCTTCEEEE-------------
T ss_pred eeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--cCCCcCCCccCCCeEeCC-------------
Confidence 56667889999999999999999999999999999999999975578 467899999999999887
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh-----
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS----- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s----- 178 (374)
|.|.+.|++| +. .|.+++|+|++++ +.++++.||++...... .| ...++||||||+...+
T Consensus 69 ----~~~~i~Yg~G---s~-~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~ 134 (324)
T 1am5_A 69 ----KTVDLTYGTG---GM-RGILGQDTVSVGG-----GSDPNQELGESQTEPGP-FQAAAPFDGILGLAYPSIAAAGAV 134 (324)
T ss_dssp ----EEEEEECSSC---EE-EEEEEEEEEESSS-----SCEEEEEEEEEEECCST-TTTTCSSSEEEECSCGGGCGGGCC
T ss_pred ----cEEEEEECCC---Ce-EEEEEECceeECC-----cEEcccEEEEEEecccc-cccCCCCceEEecCCccccccCCC
Confidence 8999999999 76 6999999999998 88999999999987652 34 5688999999998654
Q ss_pred -hhhhhhc---cccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCc
Q 048503 179 -LISQMGT---SIAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGN 248 (374)
Q Consensus 179 -~~~ql~~---~~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 248 (374)
++.+|.. +.+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|+|+++.+.. .. ..
T Consensus 135 ~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~~--~~-~~ 210 (324)
T 1am5_A 135 PVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTG-SIHWIPVTAEKYWQVALDGITVNGQTAAC--EG-CQ 210 (324)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCS-CCEEEEEEEETTEEEEECEEEETTEECCC--CC-EE
T ss_pred chHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCC-ceEEEecCCCcEEEEEEeEEEECCceeec--cC-ce
Confidence 4444443 3579999999875 479999999 3445 89999999988999999999999987532 23 88
Q ss_pred EEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeC
Q 048503 249 IFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNIS 328 (374)
Q Consensus 249 ~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~ 328 (374)
++|||||++++||.+++++|.+++.+. ... +.+ .++|+... .+|+|+|+|+|.+++|+|++|+++.
T Consensus 211 aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~----g~~-~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~- 276 (324)
T 1am5_A 211 AIVDTGTSKIVAPVSALANIMKDIGAS-----ENQ----GEM-MGNCASVQ---SLPDITFTINGVKQPLPPSAYIEGD- 276 (324)
T ss_dssp EEECTTCSSEEECTTTHHHHHHHHTCE-----ECC----CCE-ECCTTSSS---SSCCEEEEETTEEEEECHHHHEEES-
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCc-----ccC----CcE-EEeCCCcc---cCCcEEEEECCEEEEECHHHhcccC-
Confidence 999999999999999999998887543 222 333 78999765 7999999999999999999999876
Q ss_pred CCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 329 DEIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 329 ~~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+..|++ |+.. ++.||||.+|||++|+|||.+++|||||+++
T Consensus 277 -~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 -QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp -SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 467996 8754 3689999999999999999999999999975
No 7
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.2e-56 Score=421.20 Aligned_cols=300 Identities=22% Similarity=0.367 Sum_probs=253.6
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
+++.++.+.+|+++|+||||+|+++|++||||+++||++..|....| ..++.|||++|+|++...
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 67 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVC--KNHHRFDPRKSSTFRNLG------------- 67 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE-------------
T ss_pred ccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcccc--CCCCCCCCCCCcCeEcCC-------------
Confidence 56778889999999999999999999999999999999999986678 567899999999999887
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh-----
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS----- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s----- 178 (374)
+.|.+.|++| + +.|.+++|+|+|++ +.++++.||++...... .| ...++||||||+...+
T Consensus 68 ----~~~~i~Yg~g---s-~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~ 133 (320)
T 4aa9_A 68 ----KPLSIHYGTG---S-MEGFLGYDTVTVSN-----IVDPNQTVGLSTEQPGE-VFTYSEFDGILGLAYPSLASEYSV 133 (320)
T ss_dssp ----EEEEEEETTE---E-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCSH-HHHSCCCSEEEECSCGGGSCTTCC
T ss_pred ----cEEEEEECCc---E-EEEEEEEEEEEECC-----EeecCeEEEEEEEcccc-cccccCcccEEecCcccccccCCC
Confidence 8999999999 7 57999999999999 89999999999987651 23 5678999999987543
Q ss_pred -hhhhhhc---cccCcceecccCC-CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCcE
Q 048503 179 -LISQMGT---SIAGKFSYCLPDQ-GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNI 249 (374)
Q Consensus 179 -~~~ql~~---~~~~~Fs~~l~~~-~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 249 (374)
++.+|.. +.+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+.. .....+
T Consensus 134 ~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~w~v~l~~i~v~~~~~~~--~~~~~~ 210 (320)
T 4aa9_A 134 PVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTG-SLHWVPVTLQQYWQFTVDSVTINGVAVAC--VGGCQA 210 (320)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEE-EEEEEECSSBTTBEEEECEEEETTEEEES--TTCEEE
T ss_pred CHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccC-ceEEEEcccCCceEEEEeEEEECCEEecc--CCCcEE
Confidence 4445444 3689999999974 689999999 3445 89999999888999999999999998763 456789
Q ss_pred EEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC
Q 048503 250 FVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD 329 (374)
Q Consensus 250 iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~ 329 (374)
+|||||++++||.+++++|.+++... .... +. +.++|+... .+|+|+|+|+|.+++|++++|+...
T Consensus 211 iiDsGtt~~~lP~~~~~~i~~~~~~~----~~~~----g~-~~~~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~-- 276 (320)
T 4aa9_A 211 ILDTGTSVLFGPSSDILKIQMAIGAT----ENRY----GE-FDVNCGNLR---SMPTVVFEINGRDYPLSPSAYTSKD-- 276 (320)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHTTCE----ECTT----SC-EEECGGGGG---GCCCEEEEETTEEEEECHHHHEEEE--
T ss_pred EEECCCCcEECCHHHHHHHHHHhCCc----ccCC----Cc-EEEeCCCCC---cCceEEEEECCEEEEECHHHhccCC--
Confidence 99999999999999999998776432 2222 33 388999876 7999999999999999999999763
Q ss_pred CeEEEE-EEcC--CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 330 EIMCSA-FRGG--NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 330 ~~~C~~-i~~~--~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+..|++ |... ++.||||.+|||++|+|||.+++|||||+++
T Consensus 277 ~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 468997 7764 3679999999999999999999999999975
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.5e-55 Score=416.64 Aligned_cols=299 Identities=21% Similarity=0.375 Sum_probs=252.8
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
.++.++.+..|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 5 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 69 (329)
T 1dpj_A 5 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLAC--FLHSKYDHEASSSYKANG------------- 69 (329)
T ss_dssp EECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE-------------
T ss_pred eeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCccc--CCcCcCCcccCcCeEECC-------------
Confidence 45666788999999999999999999999999999999999985458 467899999999999876
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCChh----
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSSL---- 179 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~---- 179 (374)
|.|.+.|++| +. .|.+++|+|+|++ +.++++.||++...... .| ...++||||||+...++
T Consensus 70 ----~~~~i~Yg~G---s~-~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 70 ----TEFAIQYGTG---SL-EGYISQDTLSIGD-----LTIPKQDFAEATSEPGL-TFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp ----EEEEEEETTE---EE-EEEEEEEEEEETT-----EEEEEEEEEEEEECCHH-HHTTCSCSEEEECSCGGGCGGGCC
T ss_pred ----cEEEEEECCc---eE-EEEEEEEEEEECC-----eEECCeEEEEEEecCcc-ccccCCcceEEEeCCchhhccCCC
Confidence 8999999999 65 6999999999998 89999999999986531 12 45789999999987542
Q ss_pred --hhhhhc---cccCcceecccCC-----CcceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCC
Q 048503 180 --ISQMGT---SIAGKFSYCLPDQ-----GSSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSS 245 (374)
Q Consensus 180 --~~ql~~---~~~~~Fs~~l~~~-----~~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~ 245 (374)
..+|.. +.+++||+||.+. ..|.|+|||. +.+ ++.|+|+....+|.|.+++|.|+++.+. ..
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~---~~ 211 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKG-DITWLPVRRKAYWEVKFEGIGLGDEYAE---LE 211 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEE-EEEEEECSSBTTBEEEEEEEEETTEEEE---CS
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCC-ceEEEEcCCCceEEEEeeeEEECCeEec---CC
Confidence 233333 4579999999764 2699999993 344 8999999988899999999999999875 45
Q ss_pred CCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEE
Q 048503 246 TGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFR 325 (374)
Q Consensus 246 ~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~ 325 (374)
...++|||||++++||.+++++|.+++.+. .... +.+ .++|+... .+|+|+|+|+|.+++|+|++|++
T Consensus 212 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~----g~~-~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~ 279 (329)
T 1dpj_A 212 SHGAAIDTGTSLITLPSGLAEMINAEIGAK----KGWT----GQY-TLDCNTRD---NLPDLIFNFNGYNFTIGPYDYTL 279 (329)
T ss_dssp SCEEEECTTCSCEEECHHHHHHHHHHHTCE----ECTT----SSE-EECGGGGG---GCCCEEEEETTEEEEECTTTSEE
T ss_pred CccEEeeCCCCcEECCHHHHHHHHHHhCCc----cCCC----CeE-EEECCCCC---cCCcEEEEECCEEEEECHHHhEe
Confidence 678999999999999999999998887532 2222 333 77999765 78999999999999999999998
Q ss_pred EeCCCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 326 NISDEIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 326 ~~~~~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+.. ..|++ |... ++.||||.+|||++|+|||++++|||||+++
T Consensus 280 ~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 280 EVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 865 57996 7653 3689999999999999999999999999975
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.2e-55 Score=415.88 Aligned_cols=295 Identities=19% Similarity=0.324 Sum_probs=252.0
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCC--CCCC-------CCCCCCCCCCCCCCCCCCCcccCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCE--PCPE-------LDCFKQEPPLFDPKKSSTYNSISCSSS 95 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~--~c~~-------~~C~~~~~~~y~~~~Sst~~~~~c~~~ 95 (374)
..++...+..|+++|.||||+|+++|+|||||+++||++. .|.. ..| ..++.|||++|+|++...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (334)
T 1j71_A 4 PTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC--KQEGTFDPSSSSSAQNLN---- 77 (334)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GSSCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc--cCCCcCCcccCCCcccCC----
Confidence 4466777899999999999999999999999999999866 6752 257 567899999999999887
Q ss_pred cCCCCCCCCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCCCCCcceEeecCCC
Q 048503 96 QCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPG 175 (374)
Q Consensus 96 ~c~~~~~~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 175 (374)
|.|.+.|++| +.+.|.++.|+|++++ +.++++.||++.... ..+||||||+.
T Consensus 78 -------------~~~~i~Yg~G---s~~~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~-------~~~GilGLg~~ 129 (334)
T 1j71_A 78 -------------QDFSIEYGDL---TSSQGSFYKDTVGFGG-----ISIKNQQFADVTTTS-------VDQGIMGIGFT 129 (334)
T ss_dssp -------------EEEEEEBTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES-------SSSCEEECSCG
T ss_pred -------------CceEEEECCC---CEEEEEEEEEEEEECC-----EEEccEEEEEEEecC-------CCccEEEEcCC
Confidence 8999999999 8778999999999998 899999999999763 46899999997
Q ss_pred CC--------hhhhhhhcc---ccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEE
Q 048503 176 NS--------SLISQMGTS---IAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQR 238 (374)
Q Consensus 176 ~~--------s~~~ql~~~---~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~ 238 (374)
.. +++.+|..+ .+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.
T Consensus 130 ~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~g~~ 208 (334)
T 1j71_A 130 ADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTG-TLTALPVTSSVELRVHLGSINFDGTS 208 (334)
T ss_dssp GGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEE-EEEEEECCCSSSCEEEEEEEEETTEE
T ss_pred cccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccC-ceEEEEccCCCeEEEEEeEEEECCEe
Confidence 64 455666554 579999999863 589999999 3444 89999999989999999999999998
Q ss_pred EEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccc-cceeeccCCCCCCeEEEEE-eCceE
Q 048503 239 LEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSD-VLCYNISSQPKFPEVTIHF-RGADV 316 (374)
Q Consensus 239 ~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~P~i~~~f-~g~~~ 316 (374)
+.. ...++|||||++++||.+++++|.+++.+.+. .. ...+. ++|+ .+|.|+|+| +|.++
T Consensus 209 ~~~----~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~----~~~~~~~~C~------~~p~i~f~f~~g~~~ 270 (334)
T 1j71_A 209 VST----NADVVLDSGTTITYFSQSTADKFARIVGATWD----SR----NEIYRLPSCD------LSGDAVFNFDQGVKI 270 (334)
T ss_dssp EEE----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TT----TTEEECSSSC------CCSEEEEEESTTCEE
T ss_pred ccC----CccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CC----CceEEEEcCC------CCCceEEEEcCCcEE
Confidence 754 46799999999999999999999988876542 22 22235 8998 579999999 58999
Q ss_pred EECCCceEEEeCCCeEEEE-EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 317 KLSPSNLFRNISDEIMCSA-FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 317 ~i~~~~y~~~~~~~~~C~~-i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
+|++++|+++..++..|++ +... +.||||.+|||++|+|||++++|||||+++|++
T Consensus 271 ~i~~~~y~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 271 TVPLSELILKDSDSSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp EEEGGGGEEECSSSSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred EECHHHheeecCCCCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 9999999998765556998 7765 579999999999999999999999999999975
No 10
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=7.8e-55 Score=424.19 Aligned_cols=322 Identities=24% Similarity=0.409 Sum_probs=264.1
Q ss_pred eeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCC-C----
Q 048503 28 IISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVT-S---- 102 (374)
Q Consensus 28 ~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~-~---- 102 (374)
.+..+++|+++|.||||+|+|.|+|||||+++||+|..| .+|+|++...|.++.|.... .
T Consensus 15 ~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---------------~~Sst~~~v~C~s~~C~~~~~~~~~~ 79 (413)
T 3vla_A 15 KDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---------------YVSSTYRPVRCRTSQCSLSGSIACGD 79 (413)
T ss_dssp ECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---------------CCCTTCEECBTTSHHHHHTTCCEEEC
T ss_pred ecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---------------CCCCCcCccCCCcccccccccCCCcc
Confidence 455688999999999999999999999999999988743 47899999999998886543 2
Q ss_pred -------CCCCCCCeeeeEeC-CCCCceeeEEEEEEEEEEEecCCCC----ceecCcEEEeeeecCCCCCCCCCCcceEe
Q 048503 103 -------NCSEGDCSYSFLYG-RGAYASFSSGNLATETLTFNSTSGL----PVEMPNVIFGCGHKNLASPTSDSKQTGII 170 (374)
Q Consensus 103 -------~c~~~~~~~~~~y~-~g~~~~~~~G~~~~D~v~i~~~~~~----~~~~~~~~fg~~~~~~~~~~~~~~~~Gil 170 (374)
.|.++.|.|.+.|+ ++ +...|.+++|+|+|+..++. .+.++++.|||+...... .+..+++|||
T Consensus 80 c~s~~~~~c~~~~c~~~i~Y~~d~---~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~-g~~~~~dGIl 155 (413)
T 3vla_A 80 CFNGPRPGCNNNTCGVFPENPVIN---TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ-NLASGVVGMA 155 (413)
T ss_dssp CSSCCBTTBCSSEEEECCEETTTT---EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT-TSCTTCCEEE
T ss_pred cccCCCCCCCCCcCcceeecCcCC---ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc-Cccccccccc
Confidence 34456799999994 77 77789999999999864433 378889999999986321 2346899999
Q ss_pred ecCCCCChhhhhhhcc--ccCcceecccCC--CcceEEEcCC---------CCCCC-eeeeeeeeC--------------
Q 048503 171 GLGPGNSSLISQMGTS--IAGKFSYCLPDQ--GSSKINFGGI---------VAGAG-VVSTPLIIR-------------- 222 (374)
Q Consensus 171 GLg~~~~s~~~ql~~~--~~~~Fs~~l~~~--~~G~l~~Gg~---------~~~~~-l~~~p~~~~-------------- 222 (374)
|||+...+++.||... .+++||+||.+. ..|.|+|||. +.+ + +.|+|++..
T Consensus 156 GLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g-~~l~~tPl~~~~~~~~~~~~~~~~~ 234 (413)
T 3vla_A 156 GLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSD-KTLTYTPLLTNPVSTSATSTQGEPS 234 (413)
T ss_dssp ECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECT-TTSEEEECBCCSSCCSSSCCTTCCC
T ss_pred ccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccC-CceeEeecccCCccccccccccCCC
Confidence 9999999999998865 469999999873 5799999992 233 5 999999987
Q ss_pred CceeEEEeEEEECCEEEEeee-------CCCCcEEEecCcceeecChHHHHHHHHHHHhhhcc---CcccCCCCCCCccc
Q 048503 223 DHYYLSLEAISVGNQRLEFVS-------SSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKA---QPVKGVGAEPGFSD 292 (374)
Q Consensus 223 ~~w~v~l~~i~v~~~~~~~~~-------~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~---~~~~~~~~~~~~~~ 292 (374)
.+|.|.|++|.||++.+.++. .....+||||||++++||.++|++|.++|.+++.. ... . ....+
T Consensus 235 ~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~-~----~~~~~ 309 (413)
T 3vla_A 235 VEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV-A----SVAPF 309 (413)
T ss_dssp CSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-C----CCTTC
T ss_pred ceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-C----CCCCC
Confidence 589999999999999887531 13468999999999999999999999999987642 111 1 22336
Q ss_pred cceeeccCC------CCCCeEEEEEeC--ceEEECCCceEEEeCCCeEEEEEEcCC----CceeecccceeeeEEEEECC
Q 048503 293 VLCYNISSQ------PKFPEVTIHFRG--ADVKLSPSNLFRNISDEIMCSAFRGGN----ANIVYGRIMQINFLIGYDIE 360 (374)
Q Consensus 293 ~~C~~~~~~------~~~P~i~~~f~g--~~~~i~~~~y~~~~~~~~~C~~i~~~~----~~~iLG~~fl~~~y~vfD~e 360 (374)
..|+..... ..+|+|+|+|+| .+|+|++++|+++..++..|+++...+ +.||||..|||++|+|||++
T Consensus 310 ~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~ 389 (413)
T 3vla_A 310 GACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLA 389 (413)
T ss_dssp SCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETT
T ss_pred cceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECC
Confidence 789986532 268999999997 899999999999876678999976542 58999999999999999999
Q ss_pred CCEEEEee------CCCCCC
Q 048503 361 QAMVSFKP------SRCTNY 374 (374)
Q Consensus 361 ~~rigfa~------~~C~~~ 374 (374)
++|||||+ ..|+|+
T Consensus 390 ~~riGfa~~~~~~~~~c~~~ 409 (413)
T 3vla_A 390 TSRVGFSGTLLGSRTTCANF 409 (413)
T ss_dssp TTEEEEEEEGGGGTCCGGGS
T ss_pred CCEEEEEEecccCcccccCc
Confidence 99999996 567764
No 11
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.3e-54 Score=413.38 Aligned_cols=299 Identities=19% Similarity=0.345 Sum_probs=254.3
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCC--CCC-CCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEP--CPE-LDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVT 101 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~--c~~-~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~ 101 (374)
..++...++.|+++|.||||+|+++|+|||||+++||++.. |.. ..| ..++.|||++|+|++...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~---------- 71 (339)
T 3fv3_A 4 SLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDC--KSSGTFTPSSSSSYKNLG---------- 71 (339)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCT--TTTCCBCGGGCTTCEEEE----------
T ss_pred eeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCC--CCCCcCCCccCcceeeCC----------
Confidence 46778889999999999999999999999999999998543 432 178 568899999999999987
Q ss_pred CCCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCCCCCcceEeecCCCCCh---
Q 048503 102 SNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSS--- 178 (374)
Q Consensus 102 ~~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s--- 178 (374)
+.|.+.|++| +.+.|.++.|+|+|++ +.++++.||++..... .+||||||+...+
T Consensus 72 -------~~~~i~Yg~g---s~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~ 129 (339)
T 3fv3_A 72 -------AAFTIRYGDG---STSQGTWGKDTVTING-----VSITGQQIADVTQTSV-------DQGILGIGYTSNEAVY 129 (339)
T ss_dssp -------EEEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCB
T ss_pred -------ceEEEEECCC---ceEEEEEEEEEEEECC-----EEECceEEEEEEecCC-------CceeEEecCccccccc
Confidence 8999999999 8889999999999998 8999999999998654 5899999987542
Q ss_pred -------------hhhhhhcc---ccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECC
Q 048503 179 -------------LISQMGTS---IAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGN 236 (374)
Q Consensus 179 -------------~~~ql~~~---~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~ 236 (374)
++.||... .+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|.|++
T Consensus 130 ~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~g 208 (339)
T 3fv3_A 130 DTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSG-KLVAEQVTSSQALTISLASVNLKG 208 (339)
T ss_dssp CTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSS-CCEEEEBCCSSSCEEEEEEEEESS
T ss_pred cccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeec-ceEEEecccCccEEEEEEEEEECC
Confidence 56666554 578999999875 479999999 4555 899999999999999999999999
Q ss_pred EEEEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEe-Cce
Q 048503 237 QRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFR-GAD 315 (374)
Q Consensus 237 ~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~-g~~ 315 (374)
+.+.. ...++|||||++++||.+++++|.+++...+....... +. +.++|+.. .+|.|+|+|+ |.+
T Consensus 209 ~~~~~----~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~----~~-~~~~C~~~----~~p~i~f~f~~g~~ 275 (339)
T 3fv3_A 209 SSFSF----GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQ----YL-YFIDCNTD----TSGTTVFNFGNGAK 275 (339)
T ss_dssp CEEEE----EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTE----EE-EEECTTCC----CCSEEEEEETTSCE
T ss_pred EeecC----CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccC----ce-EEEecCCC----CCCcEEEEECCCCE
Confidence 98764 36799999999999999999999988875432110112 23 37899962 6899999995 899
Q ss_pred EEECCCceEEEeCCCeEEEE-EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 316 VKLSPSNLFRNISDEIMCSA-FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 316 ~~i~~~~y~~~~~~~~~C~~-i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
|+||+++|+++..+ ..|++ |.+ ++.||||.+|||++|+|||++++|||||+++|++
T Consensus 276 ~~v~~~~~~~~~~~-~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 276 ITVPNTEYVYQNGD-GTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp EEEEGGGGEEECSS-SCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEECHHHheeeCCC-CeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 99999999987544 46866 887 6789999999999999999999999999999985
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.9e-55 Score=416.24 Aligned_cols=298 Identities=18% Similarity=0.346 Sum_probs=251.6
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCC--CCCC-------CCCCCCCCCCCCCCCCCCCcccCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCE--PCPE-------LDCFKQEPPLFDPKKSSTYNSISCSSS 95 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~--~c~~-------~~C~~~~~~~y~~~~Sst~~~~~c~~~ 95 (374)
..++..++..|+++|.||||+|+++|+|||||+++||++. .|.. ..| ..++.|||++|+|++...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 2qzx_A 4 AVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC--KSAGSYSPASSRTSQNLN---- 77 (342)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc--cCCCcCCcccCCCcccCC----
Confidence 4456678899999999999999999999999999999865 6752 357 567899999999999887
Q ss_pred cCCCCCCCCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCCCCCcceEeecCCC
Q 048503 96 QCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPG 175 (374)
Q Consensus 96 ~c~~~~~~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 175 (374)
|.|.+.|++| +.+.|.++.|+|++++ +.++++.||++.... ..+||||||+.
T Consensus 78 -------------~~~~i~Yg~G---s~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~-------~~~GilGLg~~ 129 (342)
T 2qzx_A 78 -------------TRFDIKYGDG---SYAKGKLYKDTVGIGG-----VSVRDQLFANVWSTS-------ARKGILGIGFQ 129 (342)
T ss_dssp -------------EEEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEEC-------SSSCEEECSCG
T ss_pred -------------CcEEEEeCCC---CeEEEEEEEEEEEECC-----EEecceEEEEEEecC-------CCcCEEEEccc
Confidence 8999999999 8778999999999998 899999999999763 46899999997
Q ss_pred CC--------hhhhhhhcc---ccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEE
Q 048503 176 NS--------SLISQMGTS---IAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQR 238 (374)
Q Consensus 176 ~~--------s~~~ql~~~---~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~ 238 (374)
.. +++.+|..+ .+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.
T Consensus 130 ~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~g~~ 208 (342)
T 2qzx_A 130 SGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSG-SLVDLPITSEKKLTVGLRSVNVRGRN 208 (342)
T ss_dssp GGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSS-CCEEEECCCSSSCEEEEEEEEETTEE
T ss_pred cccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEec-ceEEEeccCCceEEEEEeEEEECCEe
Confidence 54 455666554 579999999863 579999999 4555 89999999989999999999999998
Q ss_pred EEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEE-eCceEE
Q 048503 239 LEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHF-RGADVK 317 (374)
Q Consensus 239 ~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f-~g~~~~ 317 (374)
+.. ...++|||||++++||.+++++|.+++.+.+..... . ...+.++|+ .+|.|+|+| +|.+|+
T Consensus 209 ~~~----~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~-~----~~~~~~~C~------~~p~i~f~f~~g~~~~ 273 (342)
T 2qzx_A 209 VDA----NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA-G----NKVYVADCK------TSGTIDFQFGNNLKIS 273 (342)
T ss_dssp EEE----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT-S----CEEEEECTT------CCCEEEEEETTTEEEE
T ss_pred cCC----CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC-C----CcEEEEECC------CCCcEEEEECCCcEEE
Confidence 754 467999999999999999999999888765432111 1 223377997 579999999 589999
Q ss_pred ECCCceEEEe-----CCCeEEEE-EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 318 LSPSNLFRNI-----SDEIMCSA-FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 318 i~~~~y~~~~-----~~~~~C~~-i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
|++++|+++. .++..|++ +... +.||||.+|||++|+|||++++|||||+++|++
T Consensus 274 i~~~~~~~~~~~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 274 VPVSEFLFQTYYTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp EEGGGGEECCBCTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EcHHHhcccccccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 9999999874 22457998 7664 579999999999999999999999999999975
No 13
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.5e-54 Score=410.40 Aligned_cols=298 Identities=22% Similarity=0.344 Sum_probs=252.3
Q ss_pred ccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCC
Q 048503 24 YQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSN 103 (374)
Q Consensus 24 ~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~ 103 (374)
........+..|+++|.||||+|+++|+|||||+++||+|..|. .| .+.++.|||++|+|++...
T Consensus 6 v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~c-~~~~~~y~~~~SsT~~~~~------------ 70 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--NC-GSGQTKYDPNQSSTYQADG------------ 70 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--SC-CTTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--hH-hcCCCCCCcccCCCeeeCC------------
Confidence 34456788999999999999999999999999999999999998 66 3678899999999999876
Q ss_pred CCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh----
Q 048503 104 CSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS---- 178 (374)
Q Consensus 104 c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s---- 178 (374)
|.|.+.|++| +.+.|.+++|+|++++ +.++++.||++..... .| ...++||||||+...+
T Consensus 71 -----~~~~i~Yg~G---s~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~--~f~~~~~~GilGLg~~~~s~~~~ 135 (325)
T 2apr_A 71 -----RTWSISYGDG---SSASGILAKDNVNLGG-----LLIKGQTIELAKREAA--SFASGPNDGLLGLGFDTITTVRG 135 (325)
T ss_dssp -----EEEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECH--HHHTSSCSEEEECSCGGGCSSTT
T ss_pred -----CEEEEEECCC---CCEEEEEEEEEEEECC-----EEECcEEEEEEeccCc--ccccCCCceEEEeCCcccccccC
Confidence 8999999999 8778999999999998 8999999999998765 45 4568999999987643
Q ss_pred ---hhhhhhcc---ccCcceecccCC---CcceEEEcC----CCCCCCeeeeeeee-CCceeEEEeEEEECCEEEEeeeC
Q 048503 179 ---LISQMGTS---IAGKFSYCLPDQ---GSSKINFGG----IVAGAGVVSTPLII-RDHYYLSLEAISVGNQRLEFVSS 244 (374)
Q Consensus 179 ---~~~ql~~~---~~~~Fs~~l~~~---~~G~l~~Gg----~~~~~~l~~~p~~~-~~~w~v~l~~i~v~~~~~~~~~~ 244 (374)
++.+|... .+++||+||.+. ..|.|+||| ++.+ ++.|+|+.. ..+|.|.+++|+|++ .+. .
T Consensus 136 ~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~~v~l~~i~vg~-~~~---~ 210 (325)
T 2apr_A 136 VKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKG-SLTTVPIDNSRGWWGITVDRATVGT-STV---A 210 (325)
T ss_dssp CCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCS-CCEEEECBCTTSSCEEEECEEEETT-EEE---E
T ss_pred CCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccC-ceEEEEccCCCCEEEEEEeEEEECC-Eec---C
Confidence 45555543 579999999542 579999999 3455 899999974 459999999999999 333 4
Q ss_pred CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceE
Q 048503 245 STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLF 324 (374)
Q Consensus 245 ~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~ 324 (374)
....++|||||++++||++++++|++++.+.+... +. +.++|+.. .+|+|+|+|+|.+++||+++|+
T Consensus 211 ~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~--------g~-~~~~C~~~----~~p~i~f~f~g~~~~ip~~~~~ 277 (325)
T 2apr_A 211 SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD--------GT-YTISCDTS----AFKPLVFSINGASFQVSPDSLV 277 (325)
T ss_dssp CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS--------SC-EEECSCGG----GCCCEEEEETTEEEEECGGGGE
T ss_pred CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC--------Ce-EEEECCCC----CCCcEEEEECCEEEEECHHHEE
Confidence 56789999999999999999999998887653221 22 36799852 5899999999889999999998
Q ss_pred EEeCCCeEEEE-EEcC-CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 325 RNISDEIMCSA-FRGG-NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 325 ~~~~~~~~C~~-i~~~-~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+... +..|++ +... ++.||||.+|||++|+|||++++|||||+++
T Consensus 278 ~~~~-~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 278 FEEF-QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEEE-TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EcCC-CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 8654 568998 7654 4789999999999999999999999999875
No 14
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.8e-55 Score=418.30 Aligned_cols=301 Identities=21% Similarity=0.315 Sum_probs=257.1
Q ss_pred ccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCC
Q 048503 24 YQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCP--ELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVT 101 (374)
Q Consensus 24 ~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~--~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~ 101 (374)
.+++.++.+..|+++|.||||+|+++|+|||||+++||++..|. ...| ..++.|+|++|+|++...
T Consensus 9 ~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~---------- 76 (341)
T 3k1w_A 9 SVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG---------- 76 (341)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE----------
T ss_pred cccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC----------
Confidence 46777788999999999999999999999999999999999997 3468 567899999999999876
Q ss_pred CCCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh--
Q 048503 102 SNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS-- 178 (374)
Q Consensus 102 ~~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s-- 178 (374)
+.|.+.|++| + +.|.+++|+|+|++ +.+ ++.||++...... .| ...++||||||+...+
T Consensus 77 -------~~~~i~Yg~g---s-~~G~~~~D~v~ig~-----~~v-~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~ 138 (341)
T 3k1w_A 77 -------TELTLRYSTG---T-VSGFLSQDIITVGG-----ITV-TQMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAIG 138 (341)
T ss_dssp -------EEEEEEETTE---E-EEEEEEEEEEEETT-----EEE-EEEEEEEEECCHH-HHTTCSSSEEEECSCGGGCGG
T ss_pred -------CEEEEEECCc---E-EEEEEEEEEEEECC-----cee-eEEEEEEEEcccc-ccccCCcceEEECCchhhccc
Confidence 8999999999 7 57999999999998 889 9999999987651 13 5678999999998654
Q ss_pred ----hhhhhh---ccccCcceecccCCC------cceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEe
Q 048503 179 ----LISQMG---TSIAGKFSYCLPDQG------SSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEF 241 (374)
Q Consensus 179 ----~~~ql~---~~~~~~Fs~~l~~~~------~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~ 241 (374)
++.+|. .+.+++||+||.+.. .|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+..
T Consensus 139 ~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~w~v~l~~i~v~~~~~~~ 217 (341)
T 3k1w_A 139 RVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEG-NFHYINLIKTGVWQIQMKGVSVGSSTLLC 217 (341)
T ss_dssp GCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEE-EEEEEECSSTTSCEEEECCEEETTEEEEC
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccC-ceEEEecCCCCEEEEEEeEEEECCEEeec
Confidence 344443 346899999998763 79999999 3444 89999999888999999999999997653
Q ss_pred eeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCC
Q 048503 242 VSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPS 321 (374)
Q Consensus 242 ~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~ 321 (374)
.....++|||||++++||.+++++|.+++... .... + +.++|+... .+|+|+|+|+|.+++|+++
T Consensus 218 --~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~----~~~~----g--~~~~C~~~~---~~p~i~f~f~g~~~~l~~~ 282 (341)
T 3k1w_A 218 --EDGCLALVDTGASYISGSTSSIEKLMEALGAK----KRLF----D--YVVKCNEGP---TLPDISFHLGGKEYTLTSA 282 (341)
T ss_dssp --TTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----ECSS----C--EEEEGGGGG---GCCCEEEEETTEEEEECHH
T ss_pred --CCCCEEEEECCCChhcCCHHHHHHHHHHcCCe----ecCC----C--eEEeCCCCC---cCCcEEEEECCEEEEECHH
Confidence 56688999999999999999999998887543 2222 3 488999765 7899999999999999999
Q ss_pred ceEEEeCC--CeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 322 NLFRNISD--EIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 322 ~y~~~~~~--~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+|++.... +..|++ |... ++.||||.+|||++|+|||.+++|||||+++
T Consensus 283 ~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 283 DYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 99987542 578997 7762 3689999999999999999999999999975
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=6.3e-55 Score=413.85 Aligned_cols=299 Identities=26% Similarity=0.433 Sum_probs=253.6
Q ss_pred ceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCC
Q 048503 26 AEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCS 105 (374)
Q Consensus 26 ~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~ 105 (374)
++. +.+.+|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 6 ~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 68 (329)
T 1htr_B 6 PMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQAC--TSHSRFNPSESSTYSTNG-------------- 68 (329)
T ss_dssp GGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred eeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCccc--CCCCcCCCccCCCeEECC--------------
Confidence 444 888999999999999999999999999999999999975568 467899999999999887
Q ss_pred CCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh------
Q 048503 106 EGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS------ 178 (374)
Q Consensus 106 ~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s------ 178 (374)
+.|.+.|++| +. .|.+++|+|++++ +.++++.||++...... .| ...++||||||+...+
T Consensus 69 ---~~~~i~Yg~g---s~-~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~ 135 (329)
T 1htr_B 69 ---QTFSLQYGSG---SL-TGFFGYDTLTVQS-----IQVPNQEFGLSENEPGT-NFVYAQFDGIMGLAYPALSVDEATT 135 (329)
T ss_dssp ---EEEEEEETTE---EE-EEEEEEEEEEETT-----EEEEEEEEEEESSCSSG-GGGGCSCCEEEECCCCSCCCTTCCS
T ss_pred ---cEEEEEeCCC---Ce-EEEEEeeeEEEcc-----eEECceEEEEEEEcccc-ccccCCCceEEecCCCcccccCCCC
Confidence 8999999999 76 7999999999998 89999999999987552 23 5678999999998764
Q ss_pred hhhhhhc---cccCcceecccCCC---cceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCc
Q 048503 179 LISQMGT---SIAGKFSYCLPDQG---SSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGN 248 (374)
Q Consensus 179 ~~~ql~~---~~~~~Fs~~l~~~~---~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 248 (374)
++.+|.. +.+++||+||.+.. .|.|+|||. +.+ ++.|+|+....+|.|.+++|+|+++.+.. ......
T Consensus 136 ~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-~~~~~~ 213 (329)
T 1htr_B 136 AMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTG-QIYWAPVTQELYWQIGIEEFLIGGQASGW-CSEGCQ 213 (329)
T ss_dssp HHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEE-EEEEEEBCSSSSCEEEECEEEETTEECCT-TTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCC-ceEEEECCCCceEEEEEeEEEECCceeee-cCCCce
Confidence 4444443 35799999998862 799999993 344 89999999888999999999999987531 145678
Q ss_pred EEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeC
Q 048503 249 IFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNIS 328 (374)
Q Consensus 249 ~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~ 328 (374)
++|||||++++||.+++++|.+++.... ... +.+ .++|+... .+|+|+|+|+|.+|+|+|++|+++..
T Consensus 214 aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~~~----g~~-~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~ 281 (329)
T 1htr_B 214 AIVDTGTSLLTVPQQYMSALLQATGAQE----DEY----GQF-LVNCNSIQ---NLPSLTFIINGVEFPLPPSSYILSNN 281 (329)
T ss_dssp EEECTTCCSEEEEGGGHHHHHHHHTCEE----CTT----SCE-EECGGGGG---GSCCEEEEETTEEEEECHHHHEEECS
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCee----cCC----CeE-EEeCCCcc---cCCcEEEEECCEEEEECHHHhcccCC
Confidence 9999999999999999999988875432 222 333 78999765 79999999999999999999998876
Q ss_pred CCeEEEE-EEcC------CC-ceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 329 DEIMCSA-FRGG------NA-NIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 329 ~~~~C~~-i~~~------~~-~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+ .|++ |+.. ++ .||||.+|||++|+|||++++|||||+++
T Consensus 282 -g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 282 -G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp -S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 3 8997 7653 34 89999999999999999999999999875
No 16
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2e-54 Score=412.53 Aligned_cols=299 Identities=21% Similarity=0.376 Sum_probs=251.4
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCC--CC-------CCCCCCCCCCCCCCCCCCCCcccCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEP--CP-------ELDCFKQEPPLFDPKKSSTYNSISCSSS 95 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~--c~-------~~~C~~~~~~~y~~~~Sst~~~~~c~~~ 95 (374)
..++..++++|+++|.||||+|+++|++||||+++||++.. |. ...| ..++.|||++|+|++...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 4 PVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred ceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceeecC----
Confidence 45677889999999999999999999999999999998664 52 2367 467899999999999987
Q ss_pred cCCCCCCCCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCCCCCcceEeecCCC
Q 048503 96 QCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPG 175 (374)
Q Consensus 96 ~c~~~~~~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 175 (374)
+.|.+.|++| +.+.|.++.|+|+|++ +.++++.||++.... ..+||||||+.
T Consensus 78 -------------~~~~i~Yg~g---s~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~-------~~~GilGLg~~ 129 (342)
T 3pvk_A 78 -------------TPFKIGYGDG---SSSQGTLYKDTVGFGG-----VSIKNQVLADVDSTS-------IDQGILGVGYK 129 (342)
T ss_dssp -------------EEEEEECSSS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES-------SSSCEEECSCG
T ss_pred -------------CeEEEEecCC---CeEEEEEEEEEEEECC-----EEecceEEEEEEccC-------CCccEEEecCc
Confidence 8999999999 8778999999999998 899999999998754 46899999998
Q ss_pred CC-------hhhhhhhcc---ccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEE
Q 048503 176 NS-------SLISQMGTS---IAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRL 239 (374)
Q Consensus 176 ~~-------s~~~ql~~~---~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~ 239 (374)
.. +++.+|... .+++||+||.+. ..|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+
T Consensus 130 ~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~g~~~ 208 (342)
T 3pvk_A 130 TNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSG-SLIALPVTSDRELRISLGSVEVSGKTI 208 (342)
T ss_dssp GGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSS-CCEEEECCCSSSCEEEEEEEEETTEEE
T ss_pred cccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceee-eeEEeecCccceEEEEEeEEEECCEEe
Confidence 63 466666554 578999999774 579999999 4555 899999999999999999999999988
Q ss_pred EeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEe-CceEEE
Q 048503 240 EFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFR-GADVKL 318 (374)
Q Consensus 240 ~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~-g~~~~i 318 (374)
.. ....++|||||++++||.+++++|.+++......... . ...+.++|+ ..|.|+|+|+ |.+++|
T Consensus 209 ~~---~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~-~----~~~~~~~C~------~~p~i~f~f~~g~~~~v 274 (342)
T 3pvk_A 209 NT---DNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSN-G----NSFYEVDCN------LSGDVVFNFSKNAKISV 274 (342)
T ss_dssp EE---EEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTT-S----CEEEEECSC------CCSEEEEEESTTCEEEE
T ss_pred cC---CCceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCC-C----ceEEEEecC------CCCceEEEECCCCEEEE
Confidence 64 2478999999999999999999998887654322211 1 122488999 5699999998 799999
Q ss_pred CCCceEEEeC--C---CeEEEE-EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 319 SPSNLFRNIS--D---EIMCSA-FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 319 ~~~~y~~~~~--~---~~~C~~-i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
|+++|+++.. + ...|++ +.+ .+.||||.+|||++|+|||.+++|||||+++|++
T Consensus 275 p~~~~~~~~~~~~g~~~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 275 PASEFAASLQGDDGQPYDKCQLLFDV-NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp EGGGGEEC----------CEEESEEE-CTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred cHHHheeeccccCCCcCCeeEEEEee-CCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 9999998632 2 257988 766 4789999999999999999999999999999974
No 17
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1e-53 Score=416.26 Aligned_cols=327 Identities=21% Similarity=0.365 Sum_probs=256.2
Q ss_pred ccee-eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCC--
Q 048503 25 QAEI-ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVT-- 101 (374)
Q Consensus 25 ~~~~-~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~-- 101 (374)
.|+. +..+++|+++|.||||+|+|.|+|||||+++||+|..| .+|+|++...|.+..|....
T Consensus 12 ~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~---------------~~Sst~~~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 12 LPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ---------------YSSKTYQAPFCHSTQCSRANTH 76 (403)
T ss_dssp EEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC---------------CCCSSCBCCCTTBHHHHHTTCC
T ss_pred EeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC---------------CCCCCCCccCCCCccccCcccc
Confidence 4444 56789999999999999999999999999999987643 46888888888877775433
Q ss_pred ----------CCCCCCCCeeeeEeC-CCCCceeeEEEEEEEEEEEecCCCCc------eecCcEEEeeeecCCCCCCC-C
Q 048503 102 ----------SNCSEGDCSYSFLYG-RGAYASFSSGNLATETLTFNSTSGLP------VEMPNVIFGCGHKNLASPTS-D 163 (374)
Q Consensus 102 ----------~~c~~~~~~~~~~y~-~g~~~~~~~G~~~~D~v~i~~~~~~~------~~~~~~~fg~~~~~~~~~~~-~ 163 (374)
+.|.+..|.|.+.|+ ++ +.+.|.+++|+|.|++.++.. +.++++.|||+...... .+ .
T Consensus 77 ~c~~c~~~~~s~~~~~~~~~~~~Y~~d~---~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~-~~~~ 152 (403)
T 3aup_A 77 QCLSCPAASRPGCHKNTCGLMSTNPITQ---QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQ-KGLP 152 (403)
T ss_dssp CEEECSSSCBTTBCSSEEEEEEEETTTT---EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGS-SSSS
T ss_pred CccccCCCCCCCCCCCcceeEeecCCCC---ceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccc-cCCC
Confidence 234345789999998 67 778899999999999865443 78889999999987431 13 4
Q ss_pred CCcceEeecCCCCChhhhhhhcc--ccCcceecccCC--CcceEEEcC---CC--C-C----CCeeeeeeeeC--CceeE
Q 048503 164 SKQTGIIGLGPGNSSLISQMGTS--IAGKFSYCLPDQ--GSSKINFGG---IV--A-G----AGVVSTPLIIR--DHYYL 227 (374)
Q Consensus 164 ~~~~GilGLg~~~~s~~~ql~~~--~~~~Fs~~l~~~--~~G~l~~Gg---~~--~-~----~~l~~~p~~~~--~~w~v 227 (374)
..++||||||+...+++.|+++. .+++||+||.+. ..|.|+||| .+ . + .++.|+|++.. .+|.|
T Consensus 153 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v 232 (403)
T 3aup_A 153 RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNV 232 (403)
T ss_dssp TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEE
T ss_pred CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceE
Confidence 68899999999999999998654 568999999873 689999999 33 2 2 38999999988 69999
Q ss_pred EEeEEEECCEEE-Eeee-------CCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeecc
Q 048503 228 SLEAISVGNQRL-EFVS-------SSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNIS 299 (374)
Q Consensus 228 ~l~~i~v~~~~~-~~~~-------~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~ 299 (374)
.+++|.|+++.+ .++. .....+||||||++++||++++++|.++|.++++........ .....-++|....
T Consensus 233 ~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~c~~c~~~~ 311 (403)
T 3aup_A 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSV-APFGLCFNSNKIN 311 (403)
T ss_dssp CEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCC-TTCSCEECGGGCC
T ss_pred EEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCC-CCCCceEECCCcC
Confidence 999999999887 4321 113459999999999999999999999997765431110000 0111244565443
Q ss_pred CCCCCCeEEEEEeCc---eEEECCCceEEEeCCCeEEEEEEcCC----CceeecccceeeeEEEEECCCCEEEE------
Q 048503 300 SQPKFPEVTIHFRGA---DVKLSPSNLFRNISDEIMCSAFRGGN----ANIVYGRIMQINFLIGYDIEQAMVSF------ 366 (374)
Q Consensus 300 ~~~~~P~i~~~f~g~---~~~i~~~~y~~~~~~~~~C~~i~~~~----~~~iLG~~fl~~~y~vfD~e~~rigf------ 366 (374)
.+|.|+|+|+|. +|+|++++|+++..++..|++|+..+ +.||||..|||++|+|||++++||||
T Consensus 312 ---~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~ 388 (403)
T 3aup_A 312 ---AYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLH 388 (403)
T ss_dssp ---CCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGG
T ss_pred ---cCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEeccccc
Confidence 799999999975 99999999999876667899987654 58999999999999999999999999
Q ss_pred -eeCCCCCC
Q 048503 367 -KPSRCTNY 374 (374)
Q Consensus 367 -a~~~C~~~ 374 (374)
++++|+++
T Consensus 389 ~~~~~C~~~ 397 (403)
T 3aup_A 389 SHGVKCADL 397 (403)
T ss_dssp GGTCCGGGS
T ss_pred ccCCCcccc
Confidence 67778753
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.1e-54 Score=408.97 Aligned_cols=298 Identities=21% Similarity=0.290 Sum_probs=248.5
Q ss_pred eeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCC
Q 048503 28 IISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEG 107 (374)
Q Consensus 28 ~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~ 107 (374)
..+.+..|+++|.||||+|+++|+|||||+++||+|..|. .|..+.++.|||++|+|++...
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~~~~~~y~~~~SsT~~~~~---------------- 71 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP--KSSATGHAIYTPSKSSTSKKVS---------------- 71 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCGGGCTTCEECT----------------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC--ccccCCCCcCCcccCcCceEcC----------------
Confidence 4567889999999999999999999999999999999998 5533678899999999999843
Q ss_pred CCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh-------
Q 048503 108 DCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS------- 178 (374)
Q Consensus 108 ~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s------- 178 (374)
.+.|.+.|++| +.+.|.+++|+|+|++ +.++++.||++..... .| ...++||||||+...+
T Consensus 72 ~~~~~i~Yg~G---s~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~~~~~ 141 (329)
T 3c9x_A 72 GASWSISYGDG---SSSSGDVYTDKVTIGG-----FSVNTQGVESATRVST--EFVQDTVISGLVGLAFDSGNQVRPHPQ 141 (329)
T ss_dssp TCBEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECH--HHHHCTTCCEEEECSCGGGCCCBSSCC
T ss_pred CCeEEEEeCCC---CcEEEEEEEEEEEECC-----EEEcceEEEEEEecCc--cccccCCCceeEEeCcccccccCCCCC
Confidence 18999999999 8678999999999998 8999999999998764 33 3578999999997543
Q ss_pred --hhhhhhcc-ccCcceecccCCCcceEEEcC----CCCCCCeeeeeeee-CCceeEEEeEEEECCEEEEeeeCCCCcEE
Q 048503 179 --LISQMGTS-IAGKFSYCLPDQGSSKINFGG----IVAGAGVVSTPLII-RDHYYLSLEAISVGNQRLEFVSSSTGNIF 250 (374)
Q Consensus 179 --~~~ql~~~-~~~~Fs~~l~~~~~G~l~~Gg----~~~~~~l~~~p~~~-~~~w~v~l~~i~v~~~~~~~~~~~~~~~i 250 (374)
+..+|... .+++||+||.+...|.|+||| ++.+ ++.|+|+.. ..+|.|.+++|.|+++.+. .....++
T Consensus 142 ~~~~~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~~v~l~~i~v~~~~~~---~~~~~ai 217 (329)
T 3c9x_A 142 KTWFSNAASSLAEPLFTADLRHGQNGSYNFGYIDTSVAKG-PVAYTPVDNSQGFWEFTASGYSVGGGKLN---RNSIDGI 217 (329)
T ss_dssp CCHHHHHHTTSSSSEEEEECCSSSCEEEEESSCCGGGCSS-CEEEEECBCTTSSCEEEECCEEETTCCCC---SCCEEEE
T ss_pred CCHHHHHHHhcCCCEEEEEecCCCCcEEEEeCcChhhccc-ceEEEEccCCCceEEEEEeeEEECCEecc---CCCceEE
Confidence 44455443 579999999876689999999 4455 899999974 5599999999999998763 4567899
Q ss_pred EecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC-
Q 048503 251 VDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD- 329 (374)
Q Consensus 251 iDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~- 329 (374)
|||||++++||++++++|.+++... ..... ...+.++|+. .+|.|+|+|+|.+++||+++|++...+
T Consensus 218 iDSGTt~~~lp~~~~~~i~~~i~~a---~~~~~----~~~~~~~C~~-----~~P~i~f~f~g~~~~ip~~~~~~~~~~~ 285 (329)
T 3c9x_A 218 ADTGTTLLLLDDNVVDAYYANVQSA---QYDNQ----QEGVVFDCDE-----DLPSFSFGVGSSTITIPGDLLNLTPLEE 285 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTCTTC---EEETT----TTEEEEETTC-----CCCCEEEEETTEEEEECGGGGEEEESST
T ss_pred EECCCCcEeCCHHHHHHHHHhCCCc---EEcCC----CCEEEEECCC-----CCCcEEEEECCEEEEECHHHeeeeccCC
Confidence 9999999999999999987665322 11111 1223679983 789999999999999999999987633
Q ss_pred -CeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeC
Q 048503 330 -EIMCSA-FRGGN--ANIVYGRIMQINFLIGYDIEQAMVSFKPS 369 (374)
Q Consensus 330 -~~~C~~-i~~~~--~~~iLG~~fl~~~y~vfD~e~~rigfa~~ 369 (374)
...|++ |+..+ +.||||.+|||++|+|||++++|||||+.
T Consensus 286 ~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 286 GSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp TCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 478998 87653 78999999999999999999999999974
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.4e-54 Score=416.22 Aligned_cols=295 Identities=20% Similarity=0.346 Sum_probs=252.0
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
.++.++.+..|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 54 ~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 118 (375)
T 1miq_A 54 IELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGC--SIKNLYDSSKSKSYEKDG------------- 118 (375)
T ss_dssp CCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGG--GGSCCBCGGGCTTCEEEE-------------
T ss_pred EEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccc--cCCCcCCCccCCceEECC-------------
Confidence 45556688999999999999999999999999999999999986689 567899999999999887
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeec----CCCCCCC-CCCcceEeecCCCCCh-
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHK----NLASPTS-DSKQTGIIGLGPGNSS- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~----~~~~~~~-~~~~~GilGLg~~~~s- 178 (374)
|.|.+.|++| + +.|.++.|+|+|++ +.+++ .||++.. .. .| ...++||||||+...+
T Consensus 119 ----~~~~i~Yg~G---s-~~G~~~~Dtv~ig~-----~~v~~-~Fg~~~~~~~~~~---~f~~~~~dGilGLg~~~~s~ 181 (375)
T 1miq_A 119 ----TKVDITYGSG---T-VKGFFSKDLVTLGH-----LSMPY-KFIEVTDTDDLEP---IYSSVEFDGILGLGWKDLSI 181 (375)
T ss_dssp ----EEEEEEETTE---E-EEEEEEEEEEEETT-----EEEEE-EEEEEEECGGGTT---HHHHSCCCEEEECSSCCTTC
T ss_pred ----cEEEEEeCCC---e-EEEEEEEEEEEEcC-----ceECc-EEEEEEecccccc---ccccCCCceEEeCCCCcccc
Confidence 8999999999 7 57999999999998 89999 9999998 43 23 4578999999998764
Q ss_pred -----hhhhhhc---cccCcceecccCC--CcceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeC
Q 048503 179 -----LISQMGT---SIAGKFSYCLPDQ--GSSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSS 244 (374)
Q Consensus 179 -----~~~ql~~---~~~~~Fs~~l~~~--~~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~ 244 (374)
++.+|.. +..++||+||.+. ..|.|+|||. +.+ ++.|+|+....+|.|.++ |.|+++.+
T Consensus 182 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~w~v~l~-i~v~g~~~----- 254 (375)
T 1miq_A 182 GSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEG-NITYEKLNHDLYWQIDLD-VHFGKQTM----- 254 (375)
T ss_dssp SSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEE-EEEEEEBSSSSSSEEEEE-EEETTEEE-----
T ss_pred cCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCC-ceEEEecCCCceEEEEEE-EEECCEEc-----
Confidence 3444443 3579999999885 4799999993 344 899999998889999999 99999876
Q ss_pred CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceE
Q 048503 245 STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLF 324 (374)
Q Consensus 245 ~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~ 324 (374)
....++|||||+++++|.+++++|.+++.... ... ...+.++|+. . .+|+|+|+|+|.+|+|+|++|+
T Consensus 255 ~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~~----~g~~~~~C~~-~---~~P~i~f~f~g~~~~l~~~~yi 322 (375)
T 1miq_A 255 EKANVIVDSGTTTITAPSEFLNKFFANLNVIK----VPF----LPFYVTTCDN-K---EMPTLEFKSANNTYTLEPEYYM 322 (375)
T ss_dssp EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE----CTT----SSCEEEETTC-T---TCCCEEEECSSCEEEECGGGSE
T ss_pred ccceEEecCCCccEEcCHHHHHHHHHHhCCcc----cCC----CCeEEEECCC-C---CCCcEEEEECCEEEEECHHHhE
Confidence 25689999999999999999999988875431 112 2223789997 3 7999999999999999999999
Q ss_pred EEeC--CCeEEEE-EEcCC---CceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 325 RNIS--DEIMCSA-FRGGN---ANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 325 ~~~~--~~~~C~~-i~~~~---~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+... +...|++ |++.+ +.||||.+|||++|+|||.+++|||||+++
T Consensus 323 ~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 323 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9875 3458986 88765 789999999999999999999999999875
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=6.4e-54 Score=406.86 Aligned_cols=296 Identities=21% Similarity=0.288 Sum_probs=245.8
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGD 108 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~~ 108 (374)
...++.|+++|.||||+|+++|+|||||+++||+|..|. .|.. .++.|||++|+|++... .
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~-~~~~y~~~~SsT~~~~~----------------~ 71 (329)
T 1oew_A 11 DSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--ASEV-XQTIYTPSKSTTAKLLS----------------G 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--GGGC--CCCBCGGGCTTCEEEE----------------E
T ss_pred CCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--cccc-ccCccCCccCccceecC----------------C
Confidence 457889999999999999999999999999999999998 5532 67899999999999842 1
Q ss_pred CeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh--------
Q 048503 109 CSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS-------- 178 (374)
Q Consensus 109 ~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s-------- 178 (374)
+.|.+.|++| +.+.|.+++|+|++++ +.++++.||++..... .| ...++||||||+...+
T Consensus 72 ~~~~i~Yg~G---s~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~~~~~~ 141 (329)
T 1oew_A 72 ATWSISYGDG---SSSSGDVYTDTVSVGG-----LTVTGQAVESAKKVSS--SFTEDSTIDGLLGLAFSTLNTVSPTQQK 141 (329)
T ss_dssp EEEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECH--HHHHCTTCCEEEECSCGGGCCCBSSCCC
T ss_pred CeEEEEeCCC---CcEEEEEEEEEEEECC-----EEEeeeEEEEEEecCc--cccccCCCceEEEeccccccccCcCCCC
Confidence 8999999999 8678999999999998 8999999999998764 33 3578999999997543
Q ss_pred -hhhhhhcc-ccCcceecccCCCcceEEEcC----CCCCCCeeeeeee-eCCceeEEEeEEEECCEEEEeeeCCCCcEEE
Q 048503 179 -LISQMGTS-IAGKFSYCLPDQGSSKINFGG----IVAGAGVVSTPLI-IRDHYYLSLEAISVGNQRLEFVSSSTGNIFV 251 (374)
Q Consensus 179 -~~~ql~~~-~~~~Fs~~l~~~~~G~l~~Gg----~~~~~~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ii 251 (374)
+..+|... .+++||+||.+...|.|+||| ++.+ ++.|+|+. ...+|.|.+++|.|+++.+. .....++|
T Consensus 142 ~~~~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~~v~l~~i~v~~~~~~---~~~~~aii 217 (329)
T 1oew_A 142 TFFDNAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTG-SITYTAVSTKQGFWEWTSTGYAVGSGTFK---STSIDGIA 217 (329)
T ss_dssp CHHHHHTTTSSSSEEEEECCSSSCEEEEESCCCTTSSSS-CCEEEECBCTTSSCEEEEEEEEETTSCCE---EEEEEEEE
T ss_pred CHHHHHHHhccCcEEEEEccCCCCeEEEEeccChHhccc-ceEEEEccCCCceEEEEEeeEEECCeecc---CCCceEEE
Confidence 44555544 579999999876689999999 3445 89999998 45599999999999998664 33568999
Q ss_pred ecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC--
Q 048503 252 DTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD-- 329 (374)
Q Consensus 252 DTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~-- 329 (374)
||||++++||++++++|.+++.. +..... ...+.++|+. .+|+|+|+|+|.+++||+++|++...+
T Consensus 218 DSGTt~~~lP~~~~~~l~~~i~~---a~~~~~----~g~~~~~C~~-----~~P~i~f~fgg~~~~ip~~~~~~~~~~~~ 285 (329)
T 1oew_A 218 DTGTTLLYLPATVVSAYWAQVSG---AKSSSS----VGGYVFPCSA-----TLPSFTFGVGSARIVIPGDYIDFGPISTG 285 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTT---CEEETT----TTEEEEETTC-----CCCCEEEEETTEEEEECHHHHEEEESSTT
T ss_pred eCCCCCEECCHHHHHHHHHhCCC---cEEcCC----CCEEEEECCC-----CCCcEEEEECCEEEEECHHHeeeeecCCC
Confidence 99999999999999998766532 212211 2223689984 789999999999999999999887632
Q ss_pred CeEEEE-EEcCC--CceeecccceeeeEEEEEC-CCCEEEEeeC
Q 048503 330 EIMCSA-FRGGN--ANIVYGRIMQINFLIGYDI-EQAMVSFKPS 369 (374)
Q Consensus 330 ~~~C~~-i~~~~--~~~iLG~~fl~~~y~vfD~-e~~rigfa~~ 369 (374)
...|++ |...+ +.||||.+|||++|+|||+ +++|||||++
T Consensus 286 ~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 286 SSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp CSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 468998 77653 7899999999999999999 9999999974
No 21
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.7e-53 Score=404.00 Aligned_cols=298 Identities=17% Similarity=0.259 Sum_probs=252.9
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
.++.++.+..|+++|+|| +|+++|+|||||+++||++..|....|....++.|||++| |++..+
T Consensus 9 ~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~------------- 72 (330)
T 1yg9_A 9 KLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG------------- 72 (330)
T ss_dssp SCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE-------------
T ss_pred eeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC-------------
Confidence 566778899999999999 8999999999999999999999766784345789999999 999876
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh-----
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS----- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s----- 178 (374)
+.|.+.|++| +. .|.++.|+|++++ +.++++.||++..... .| ...++||||||+...+
T Consensus 73 ----~~~~i~Yg~G---s~-~G~~~~Dtv~ig~-----~~~~~~~fg~~~~~~~--~f~~~~~~GilGLg~~~~s~~~~~ 137 (330)
T 1yg9_A 73 ----NVQVKFFDTG---SA-VGRGIEDSLTISQ-----LTTSQQDIVLADELSQ--EVCILSADVVVGIAAPGCPNALKG 137 (330)
T ss_dssp ----EEEEEETTTE---EE-EEEEEEEEEEETT-----EEEEEEEEEEEEEECT--HHHHTTCSEEEECSCTTSCCTTSC
T ss_pred ----CEEEEEECCc---eE-EEEEEEEEEEECC-----EEEcCeEEEEEEEccc--ccccccCceEEEcCcchhccccCC
Confidence 8999999999 76 7999999999998 8999999999998733 34 5678999999998765
Q ss_pred --hhhhhhcc--ccCcceecccCC--C--cceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCC
Q 048503 179 --LISQMGTS--IAGKFSYCLPDQ--G--SSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSST 246 (374)
Q Consensus 179 --~~~ql~~~--~~~~Fs~~l~~~--~--~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 246 (374)
++.+|... .+++||+||.+. . .|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+. ...
T Consensus 138 ~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~w~v~l~~i~v~~~~~~---~~~ 213 (330)
T 1yg9_A 138 KTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDG-EFTYVPLVGDDSWKFRLDGVKIGDTTVA---PAG 213 (330)
T ss_dssp CCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEE-EEEEEEBSCTTSCCEECSEEEETTEEEE---CTT
T ss_pred CCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccC-ceEEEECCCCCEEEEEeCeEEECCEEEc---CCC
Confidence 44444332 289999999875 2 79999999 3444 8999999988899999999999998864 556
Q ss_pred CcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCC-Ccc-ccceeeccCCCCCCeEEEEEeCceEEECCCceE
Q 048503 247 GNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEP-GFS-DVLCYNISSQPKFPEVTIHFRGADVKLSPSNLF 324 (374)
Q Consensus 247 ~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~-~~~-~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~ 324 (374)
..++|||||+++++|++++++|.+++... .... + ..+ .++|+... .+|+|+|+|+|.+++|++++|+
T Consensus 214 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~~~~----g~~~~~~~~C~~~~---~~p~i~f~fgg~~~~l~~~~y~ 282 (330)
T 1yg9_A 214 TQAIIDTSKAIIVGPKAYVNPINEAIGCV----VEKT----TTRRICKLDCSKIP---SLPDVTFVINGRNFNISSQYYI 282 (330)
T ss_dssp CEEEECTTCSSEEEEHHHHHHHHHHHTCE----EEEC----SSCEEEEECGGGGG---GSCCEEEEETTEEEEECHHHHE
T ss_pred cEEEEecCCccccCCHHHHHHHHHHhCCc----ccCC----CceEEEEEECCCcc---ccCcEEEEECCEEEEECHHHhc
Confidence 88999999999999999999998887543 2212 2 133 67899765 7899999999999999999999
Q ss_pred EEeCCCeEEEE-EEcC--CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 325 RNISDEIMCSA-FRGG--NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 325 ~~~~~~~~C~~-i~~~--~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+.. +..|++ |.+. ++.||||.+|||++|+|||.+++|||||+++
T Consensus 283 ~~~--~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 283 QQN--GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEE--TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccC--CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 887 468997 7753 4789999999999999999999999999875
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.1e-53 Score=420.64 Aligned_cols=311 Identities=21% Similarity=0.331 Sum_probs=253.3
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC-CCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCP-ELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSN 103 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~-~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~ 103 (374)
.++.++.+.+|+++|+||||+|+|.|+|||||+++||++..|. ...| ..++.|||++|+|++..+
T Consensus 44 ~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~------------ 109 (478)
T 1qdm_A 44 VALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIAC--YLHSRYKAGASSTYKKNG------------ 109 (478)
T ss_dssp GGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGG--GGSCCBCGGGCTTCBCCC------------
T ss_pred EEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccc--cCCCCCCcccCCCeeeCC------------
Confidence 5556667889999999999999999999999999999999996 3478 467899999999999876
Q ss_pred CCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCChh---
Q 048503 104 CSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSSL--- 179 (374)
Q Consensus 104 c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~--- 179 (374)
+.|.+.|++| + +.|.++.|+|+|++ +.++++.||++...... .| ...++||||||+...+.
T Consensus 110 -----~~~~i~Yg~G---s-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~-~f~~~~~dGIlGLg~~~~s~~~~ 174 (478)
T 1qdm_A 110 -----KPAAIQYGTG---S-IAGYFSEDSVTVGD-----LVVKDQEFIEATKEPGI-TFLVAKFDGILGLGFKEISVGKA 174 (478)
T ss_dssp -----CEEEEEETTE---E-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCBS-HHHHCSSSEEEECSCGGGCGGGC
T ss_pred -----cEEEEEcCCC---C-eEEEEEEEEEEECC-----eEECCEEEEEEEecCCc-ccccccccceecccccccccCCC
Confidence 8999999999 7 56999999999998 89999999999986642 33 56789999999987652
Q ss_pred ---hhhh---hccccCcceecccCC----CcceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCC
Q 048503 180 ---ISQM---GTSIAGKFSYCLPDQ----GSSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSS 245 (374)
Q Consensus 180 ---~~ql---~~~~~~~Fs~~l~~~----~~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~ 245 (374)
..+| +.+..++||+||.+. ..|.|+|||. +.+ ++.|+|+....+|.|.+++|.|+++.+.+ ...
T Consensus 175 ~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G-~l~~~pv~~~~~w~v~l~~i~v~g~~~~~-~~~ 252 (478)
T 1qdm_A 175 VPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVG-EHTYVPVTQKGYWQFDMGDVLVGGKSTGF-CAG 252 (478)
T ss_dssp CCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEE-EEEEEEEEEETTEEEEECCEEETTEECST-TTT
T ss_pred CcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCC-CceEEeccCCCeEEEEEeEEEECCEEEee-cCC
Confidence 2233 334579999999874 4799999993 334 89999999888999999999999987643 134
Q ss_pred CCcEEEecCcceeecChHHHHHHHHHHHhhh----------------------c-cC-----------------------
Q 048503 246 TGNIFVDTGVLRTLLPLEYHSNLKSVMSNMI----------------------K-AQ----------------------- 279 (374)
Q Consensus 246 ~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~----------------------~-~~----------------------- 279 (374)
...+++||||+++++|.+++++|.+++.+.. . ..
T Consensus 253 ~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~ 332 (478)
T 1qdm_A 253 GCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGI 332 (478)
T ss_dssp CEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC------------
T ss_pred CceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccc
Confidence 6789999999999999999999988875320 0 00
Q ss_pred --------------------------------------------------cccCCCCCCCccccceeeccCCCCCCeEEE
Q 048503 280 --------------------------------------------------PVKGVGAEPGFSDVLCYNISSQPKFPEVTI 309 (374)
Q Consensus 280 --------------------------------------------------~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~ 309 (374)
+... -.....+.++|+... .+|+|+|
T Consensus 333 ~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~-~~~~g~~~v~C~~~~---~lP~i~f 408 (478)
T 1qdm_A 333 RSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRL-PSPMGESAVDCGSLG---SMPDIEF 408 (478)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCB-CCSSSCCEECGGGGT---TCCCEEE
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhcc-CCCCCeEEeeccccc---ccccEEE
Confidence 0000 000123378898765 8999999
Q ss_pred EEeCceEEECCCceEEEeCC--CeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 310 HFRGADVKLSPSNLFRNISD--EIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 310 ~f~g~~~~i~~~~y~~~~~~--~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+|+|..|+|+|++|++.... ...|++ |... ++.||||..|||++|+|||++++|||||+++
T Consensus 409 ~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 409 TIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 99999999999999988754 357998 7743 3689999999999999999999999999874
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.5e-53 Score=414.41 Aligned_cols=297 Identities=21% Similarity=0.329 Sum_probs=250.8
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNC 104 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c 104 (374)
.++.++.+..|+++|+||||+|++.|+|||||+++||+|..|....| ..++.|||++|+|++...
T Consensus 130 ~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C--~~~~~ydps~SsT~~~~~------------- 194 (453)
T 2bju_A 130 IELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGC--LTKHLYDSSKSRTYEKDG------------- 194 (453)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTG--GGSCCBCGGGCTTCEEEE-------------
T ss_pred eeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCcccc--CCCCcCCCccCCceeECC-------------
Confidence 45556788999999999999999999999999999999999986789 568899999999999887
Q ss_pred CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCC--CCCCC-CCCcceEeecCCCCCh---
Q 048503 105 SEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNL--ASPTS-DSKQTGIIGLGPGNSS--- 178 (374)
Q Consensus 105 ~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~--~~~~~-~~~~~GilGLg~~~~s--- 178 (374)
|.|.+.|++| + +.|.++.|+|++++ +.++ +.||++.... +. .| ...++||||||+...+
T Consensus 195 ----~~~~i~YgdG---s-~~G~~~~Dtv~ig~-----~~v~-~~Fg~a~~~~~~g~-~f~~~~~dGIlGLg~~~~s~~~ 259 (453)
T 2bju_A 195 ----TKVEMNYVSG---T-VSGFFSKDLVTVGN-----LSLP-YKFIEVIDTNGFEP-TYTASTFDGILGLGWKDLSIGS 259 (453)
T ss_dssp ----EEEEEECSSS---E-EEEEEEEEEEEETT-----EEEE-EEEEEEEECGGGTT-HHHHSSCCEEEECSCGGGSTTC
T ss_pred ----cEEEEEcCCC---C-eEEEEEEEEEEEeC-----cEEE-EEEEEEEEecccCc-cccccCCceeEeccCCcccccC
Confidence 8999999999 7 57999999999998 8998 9999999876 41 23 4678999999997654
Q ss_pred ---hhhhhhc---cccCcceecccCC--CcceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCC
Q 048503 179 ---LISQMGT---SIAGKFSYCLPDQ--GSSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSST 246 (374)
Q Consensus 179 ---~~~ql~~---~~~~~Fs~~l~~~--~~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 246 (374)
++.+|.. +..++||+||.+. ..|.|+|||. +.+ ++.|+|+....+|.|.++ |.|++. +. ..
T Consensus 260 ~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G-~l~~~pv~~~~~w~V~l~-I~Vgg~-~~----~~ 332 (453)
T 2bju_A 260 VDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEG-PLTYEKLNHDLYWQITLD-AHVGNI-ML----EK 332 (453)
T ss_dssp CCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEE-EEEEEEEEEETTEEEEEE-EEETTE-EE----EE
T ss_pred CCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCC-ceEEEecCCCceEEEEEE-EEECcE-Ee----cc
Confidence 3344443 3579999999885 5899999993 344 899999999899999999 999993 31 35
Q ss_pred CcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEE
Q 048503 247 GNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRN 326 (374)
Q Consensus 247 ~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~ 326 (374)
..++|||||+++++|.+++++|.+++.. ..... +..+.++|+. . .+|+|+|+|+|.+++|+|++|+++
T Consensus 333 ~~aIiDSGTsl~~lP~~~~~~l~~~i~~----~~~~~----g~~~~v~C~~-~---~~P~itf~fgg~~~~l~~~~yi~~ 400 (453)
T 2bju_A 333 ANCIVDSGTSAITVPTDFLNKMLQNLDV----IKVPF----LPFYVTLCNN-S---KLPTFEFTSENGKYTLEPEYYLQH 400 (453)
T ss_dssp EEEEECTTCCSEEECHHHHHHHTTTSSC----EECTT----SSCEEEETTC-T---TCCCEEEECSSCEEEECHHHHEEE
T ss_pred ccEEEcCCCCeEecCHHHHHHHHHHhCC----cccCC----CceEEEecCC-C---CCCcEEEEECCEEEEECHHHhEee
Confidence 7899999999999999999999766543 22222 3134789997 3 799999999999999999999998
Q ss_pred eC--CCeEEEE-EEcCC---CceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 327 IS--DEIMCSA-FRGGN---ANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 327 ~~--~~~~C~~-i~~~~---~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
.. ++..|++ |++.+ +.||||.+|||++|+|||.+++|||||+++
T Consensus 401 ~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 401 IEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 75 3468987 87764 589999999999999999999999999875
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=3.3e-53 Score=415.81 Aligned_cols=297 Identities=18% Similarity=0.257 Sum_probs=252.5
Q ss_pred cccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCC
Q 048503 23 IYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTS 102 (374)
Q Consensus 23 ~~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 102 (374)
...++.++.+..|+++|+||||||++.|++||||+++||++..|....| ..++.|||++|+|++...
T Consensus 127 ~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~----------- 193 (451)
T 3qvc_A 127 DNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD----------- 193 (451)
T ss_dssp CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-----------
T ss_pred CccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC-----------
Confidence 4466677789999999999999999999999999999999999976689 678899999999999876
Q ss_pred CCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeec----CCCCCCC-CCCcceEeecCCCCC
Q 048503 103 NCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHK----NLASPTS-DSKQTGIIGLGPGNS 177 (374)
Q Consensus 103 ~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~----~~~~~~~-~~~~~GilGLg~~~~ 177 (374)
+.+.+.|++| + +.|.++.|+|++++ +.++ +.||++.. .+. | ...++||||||+...
T Consensus 194 ------~~f~i~YgdG---s-~~G~~~~Dtv~igg-----~~v~-~~Fg~a~~t~~~~~~---f~~~~~dGILGLg~~~~ 254 (451)
T 3qvc_A 194 ------TPVKLTSKAG---T-ISGIFSKDLVTIGK-----LSVP-YKFIEMTEIVGFEPF---YSESDVDGVFGLGWKDL 254 (451)
T ss_dssp ------EEEEEECSSE---E-EEEEEEEEEEEETT-----EEEE-EEEEEEEEEEECTTH---HHHSCCCEEEECSSBCS
T ss_pred ------CEEEEEECCC---E-EEEEEEEEEEEECC-----EEEE-EEEEEEEeccccCCC---ccCCCCCEEEecCCCcc
Confidence 8999999999 8 67999999999998 8999 99999988 433 3 356899999999864
Q ss_pred h------hhhhhhc---cccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEee
Q 048503 178 S------LISQMGT---SIAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFV 242 (374)
Q Consensus 178 s------~~~ql~~---~~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~ 242 (374)
+ ++.+|.. +..++||+||.+. ..|.|+||| .+.+ ++.|+|+....+|.|.++ |.|+++ .
T Consensus 255 s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G-~l~~~pv~~~~~w~v~l~-I~Vgg~-~--- 328 (451)
T 3qvc_A 255 SIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDG-PLNYEKLNHDLMWQVDLD-VHFGNV-S--- 328 (451)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEE-EEEEEECSSTTSSEEEEE-EEETTE-E---
T ss_pred cccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCC-ceEEEEcccCCeeEEEEE-EEECCc-c---
Confidence 3 4444444 3678999999876 479999999 3445 899999998889999999 999998 2
Q ss_pred eCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCc
Q 048503 243 SSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSN 322 (374)
Q Consensus 243 ~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~ 322 (374)
.....+++||||+++++|.+++++|.+++... .... ...+.++|+ .. .+|+|+|+|+|.+++|||++
T Consensus 329 -~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~----~~~~----~g~y~v~C~-~~---~~P~itf~fgg~~i~lp~~~ 395 (451)
T 3qvc_A 329 -SKKANVILDSATSVITVPTEFFNQFVESASVF----KVPF----LSLYVTTCG-NT---KLPTLEYRSPNKVYTLEPKQ 395 (451)
T ss_dssp -EEEEEEEECTTBSSEEECHHHHHHHHTTTTCE----ECTT----SSCEEEETT-CT---TCCCEEEEETTEEEEECHHH
T ss_pred -CCCceEEEeCCCccccCCHHHHHHHHHHcCCe----ecCC----CCeEEeeCC-cC---cCCcEEEEECCEEEEEcHHH
Confidence 34678999999999999999999997766432 2222 223478998 43 89999999999999999999
Q ss_pred eEEEeC--CCeEEEE-EEcCC---CceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 323 LFRNIS--DEIMCSA-FRGGN---ANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 323 y~~~~~--~~~~C~~-i~~~~---~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
|+.... ++..|++ +.+.+ +.||||.+|||++|+|||.+++|||||+++
T Consensus 396 yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 396 YLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp HEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred heeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999875 3568987 87764 689999999999999999999999999975
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.6e-52 Score=396.65 Aligned_cols=295 Identities=19% Similarity=0.260 Sum_probs=245.4
Q ss_pred eeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCC
Q 048503 28 IISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEG 107 (374)
Q Consensus 28 ~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~ 107 (374)
....+..|+++|+|| +|+++|+|||||+++||+|..|....| +.++.|||++|+ ++...
T Consensus 9 ~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c--~~~~~y~~~~Ss-~~~~~---------------- 67 (325)
T 1ibq_A 9 PQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQ--TGHDLYTPSSSA-TKLSG---------------- 67 (325)
T ss_dssp ECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHH--TTSCCCBCCSSC-EECTT----------------
T ss_pred EcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCcccc--CCCCCCCchhcC-CccCC----------------
Confidence 345788999999999 899999999999999999999983344 678899999999 55444
Q ss_pred CCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh-------
Q 048503 108 DCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS------- 178 (374)
Q Consensus 108 ~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s------- 178 (374)
+.|.+.|++| +.+.|.+++|+|+|++ +.++++.||++..... .| ...++||||||+...+
T Consensus 68 -~~~~i~Yg~G---s~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~p~~~ 136 (325)
T 1ibq_A 68 -YSWDISYGDG---SSASGDVYRDTVTVGG-----VTTNKQAVEAASKISS--EFVQDTANDGLLGLAFSSINTVQPKAQ 136 (325)
T ss_dssp -CBEEEECSSS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECH--HHHTSTTCCEEEECSCGGGCCCBSSCC
T ss_pred -CEEEEEeCCC---CEEEEEEEEeEEEECC-----EEEcceEEEEEEecCc--cccccCCCceEEEeCcccccccCcCCC
Confidence 8999999999 8678999999999998 8999999999998764 33 2578999999997543
Q ss_pred --hhhhhhcc-ccCcceecccCCCcceEEEcC----CCCCCCeeeeeeee-CCceeEEEeEEEECCEEEEeeeCCCCcEE
Q 048503 179 --LISQMGTS-IAGKFSYCLPDQGSSKINFGG----IVAGAGVVSTPLII-RDHYYLSLEAISVGNQRLEFVSSSTGNIF 250 (374)
Q Consensus 179 --~~~ql~~~-~~~~Fs~~l~~~~~G~l~~Gg----~~~~~~l~~~p~~~-~~~w~v~l~~i~v~~~~~~~~~~~~~~~i 250 (374)
+.+||... .+++||+||.+...|.|+||| ++.+ ++.|+|+.. ..+|.|.+++|.|+++.+. .....++
T Consensus 137 ~~~~~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~w~v~l~~i~v~~~~~~---~~~~~ai 212 (325)
T 1ibq_A 137 TTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTG-SITYTDADSSQGYWGFSTDGYSIGDGSSS---SSGFSAI 212 (325)
T ss_dssp CCHHHHHGGGSSSSEEEEEEETTEEEEEEESSCCGGGBSS-CCEEEECBCTTSSCEEEECEEEETTSCCB---SCCEEEE
T ss_pred CCHHHHHHHhcCCcEEEEEecCCCCceEEECCcChhhccC-ceEEEEcCCCCceEEEEECcEEECCeecc---CCCceEE
Confidence 45666554 579999999876689999999 4455 899999974 5599999999999998763 4567899
Q ss_pred EecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeC--
Q 048503 251 VDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNIS-- 328 (374)
Q Consensus 251 iDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~-- 328 (374)
|||||+++++|++++++|.+++.. +..... ...+.++|+. .+|+|+|+|+|.+++||+++|++...
T Consensus 213 iDSGTt~~~lP~~~~~~i~~~i~~---a~~~~~----~g~~~~~C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~ 280 (325)
T 1ibq_A 213 ADTGTTLILLDDEIVSAYYEQVSG---AQESYE----AGGYVFSCST-----DLPDFTVVIGDYKAVVPGKYINYAPVST 280 (325)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTT---CBCCSS----SSSCEEETTC-----CCCCEEEEETTEEEEECHHHHEEEESST
T ss_pred EeCCCCcEeCCHHHHHHHHHhCCC---ceEcCc----CCeEEEEcCC-----CCCcEEEEECCEEEEECHHHhcccccCC
Confidence 999999999999999999776532 222212 2223679984 78999999999999999999988763
Q ss_pred CCeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 329 DEIMCSA-FRGGN--ANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 329 ~~~~C~~-i~~~~--~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
+...|++ |+..+ +.||||.+|||++|+|||++++|||||+++
T Consensus 281 ~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 281 GSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 3368998 87653 789999999999999999999999999874
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.3e-52 Score=396.89 Aligned_cols=293 Identities=16% Similarity=0.225 Sum_probs=244.3
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGD 108 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~~ 108 (374)
...+.+|+++|+|| +|+++|+|||||+++||+|..|....| ..++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c--~~~~~y~~~~Ss-~~~~~----------------- 68 (323)
T 1izd_A 11 TSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSER--SGHDYYTPGSSA-QKIDG----------------- 68 (323)
T ss_dssp CGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH--TTCCCBCCCTTC-EEEEE-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccc--cCCCCCCccccC-CccCC-----------------
Confidence 45788999999999 899999999999999999999983345 578899999999 65444
Q ss_pred CeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh--------
Q 048503 109 CSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS-------- 178 (374)
Q Consensus 109 ~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s-------- 178 (374)
+.|.+.|++| +.+.|.+++|+|+|++ +.++++.||++..... .| ...++||||||+...+
T Consensus 69 ~~~~i~Yg~G---s~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~p~~~~ 138 (323)
T 1izd_A 69 ATWSISYGDG---SSASGDVYKDKVTVGG-----VSYDSQAVESAEKVSS--EFTQDTANDGLLGLAFSSINTVQPTPQK 138 (323)
T ss_dssp EEEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECH--HHHHCTTCCEEEECSCGGGCCCBSSCCC
T ss_pred CeEEEEcCCC---CeEEEEEEEEEEEECC-----EEECceEEEEEEeccc--cccccCCCceEEecCcccccccCCCCCC
Confidence 8999999999 8678999999999998 8999999999998765 33 3578999999997543
Q ss_pred -hhhhhhcc-ccCcceecccCCCcceEEEcCC----CCCCCeeeeeee-eCCceeEEEeEEEECCEEEEeeeCCCCcEEE
Q 048503 179 -LISQMGTS-IAGKFSYCLPDQGSSKINFGGI----VAGAGVVSTPLI-IRDHYYLSLEAISVGNQRLEFVSSSTGNIFV 251 (374)
Q Consensus 179 -~~~ql~~~-~~~~Fs~~l~~~~~G~l~~Gg~----~~~~~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ii 251 (374)
+.++|... .+++||+||.+...|.|+|||. +.+ ++.|+|+. ...+|.|.+++|.|++ .+. .....++|
T Consensus 139 ~~~~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---~~~~~aii 213 (323)
T 1izd_A 139 TFFDNVKSSLSEPIFAVALKHNAPGVYDFGYTDSSKYTG-SITYTDVDNSQGFWGFTADGYSIGS-DSS---SDSITGIA 213 (323)
T ss_dssp CHHHHHGGGSSSSEEEEECCTTSCEEEEESSCCTTSEEE-EEEEEECBCTTSSCEEEESEEEETT-EEE---CCCEEEEE
T ss_pred CHHHHHHHhccCcEEEEEccCCCCCEEEECCcCcccccc-ceEEEECCCCCceEEEEECeEEECC-ccc---CCCceEEE
Confidence 44555443 5799999998766899999993 334 89999997 4559999999999999 553 56788999
Q ss_pred ecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCCCe
Q 048503 252 DTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEI 331 (374)
Q Consensus 252 DTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~ 331 (374)
||||+++++|++++++|.+++.. +..... ...+.++|+. .+|+|+|+|+|.+++||+++|++...++.
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~g---a~~~~~----~g~~~~~C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~~ 281 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNG---ASYDSS----QGGYVFPSSA-----SLPDFSVTIGDYTATVPGEYISFADVGNG 281 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTT---CEEETT----TTEEEEETTC-----CCCCEEEEETTEEEEECHHHHEEEECSTT
T ss_pred eCCCcceeCCHHHHHHHHHhCCC---cEEcCc----CCEEEEECCC-----CCceEEEEECCEEEecCHHHeEEecCCCC
Confidence 99999999999999999766532 222211 2223778984 78999999999999999999998876667
Q ss_pred EEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 332 MCSA-FRGGN--ANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 332 ~C~~-i~~~~--~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
.|++ |.+.+ +.||||.+|||++|+|||++++|||||+++
T Consensus 282 ~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 282 QTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 8998 87653 789999999999999999999999999874
No 27
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-51 Score=398.27 Aligned_cols=308 Identities=21% Similarity=0.297 Sum_probs=244.0
Q ss_pred ceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCC
Q 048503 26 AEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCS 105 (374)
Q Consensus 26 ~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~ 105 (374)
++....+..|+++|.||||+|+++|+|||||+++||++..|. . .++.|||++|+|++...
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~----~~~~f~~~~SsT~~~~~-------------- 65 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS--Y----IDTYFDTERSSTYRSKG-------------- 65 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT--T----BSCCCCGGGCTTCEEEE--------------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC--c----cccCcccccCccceeCC--------------
Confidence 444556678999999999999999999999999999999886 3 46789999999999887
Q ss_pred CCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh-----
Q 048503 106 EGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS----- 178 (374)
Q Consensus 106 ~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s----- 178 (374)
|.|.+.|++| +. .|.+++|+|+|++.. .....+.|+++..... .| ...++||||||+...+
T Consensus 66 ---~~~~i~Yg~G---s~-~G~~~~Dtv~i~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~dGilGLg~~~~s~~~~~ 133 (383)
T 2ewy_A 66 ---FDVTVKYTQG---SW-TGFVGEDLVTIPKGF---NTSFLVNIATIFESEN--FFLPGIKWNGILGLAYATLAKPSSS 133 (383)
T ss_dssp ---EEEEEECSSC---EE-EEEEEEEEEEETTTE---EEEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTT
T ss_pred ---ceEEEEECCc---EE-EEEEEEEEEEECCCc---cceeEEEEEEEEeecc--eeeccCcCceEEecCchhccccccc
Confidence 8999999999 75 699999999998621 1111356787765544 33 3578999999997642
Q ss_pred -------hhhhhhccccCcceecccC---------CCcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEE
Q 048503 179 -------LISQMGTSIAGKFSYCLPD---------QGSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQR 238 (374)
Q Consensus 179 -------~~~ql~~~~~~~Fs~~l~~---------~~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~ 238 (374)
+.+| ..+ +++||+||.+ ...|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.
T Consensus 134 ~~~~~~~l~~q-~~i-~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~g~~ 210 (383)
T 2ewy_A 134 LETFFDSLVTQ-ANI-PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKG-DIWYTPIKEEWYYQIEILKLEIGGQS 210 (383)
T ss_dssp SCCHHHHHHHH-HTC-CSCEEEEECCC---------CCEEEEETSCCGGGCCS-CEEEEECSSBTTBBCCEEEEEETTEE
T ss_pred ccCHHHHHHHc-cCC-CcceEEEeeccccccccCCCCCeEEEeCccchhhccC-ccEEEecCCCceEEEEEEEEEECCEE
Confidence 4445 223 6899999863 1579999999 3455 89999999888999999999999998
Q ss_pred EEeeeC--CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCC--ccccceeeccCC--CCCCeEEEEEe
Q 048503 239 LEFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPG--FSDVLCYNISSQ--PKFPEVTIHFR 312 (374)
Q Consensus 239 ~~~~~~--~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~--~~~P~i~~~f~ 312 (374)
+.++.. ....++|||||++++||.+++++|.+++.+......... +. .+.++|+..... ..+|.|+|+|+
T Consensus 211 ~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~----~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 286 (383)
T 2ewy_A 211 LNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSD----GFWTGSQLACWTNSETPWSYFPKISIYLR 286 (383)
T ss_dssp CCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCH----HHHHTSEEEEECSSSCGGGGSCCEEEEEE
T ss_pred ccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCcc----ccccccccccccCCcccHhhCCcEEEEEC
Confidence 754211 146899999999999999999999999987643211111 11 126799875321 15899999999
Q ss_pred Cc------eEEECCCceEEEeC---CCeEEEE--EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCC
Q 048503 313 GA------DVKLSPSNLFRNIS---DEIMCSA--FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCT 372 (374)
Q Consensus 313 g~------~~~i~~~~y~~~~~---~~~~C~~--i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~ 372 (374)
|. +++|+|++|+.+.. .+..|++ +.+.++.||||.+|||++|+|||++++|||||+++|.
T Consensus 287 g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 287 DENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp CSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred CCCCCceEEEEEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 74 79999999998864 3568985 5555678999999999999999999999999999995
No 28
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.1e-52 Score=395.45 Aligned_cols=293 Identities=20% Similarity=0.297 Sum_probs=243.0
Q ss_pred eeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCC
Q 048503 28 IISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEG 107 (374)
Q Consensus 28 ~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~ 107 (374)
....+..|+++|+|| +|+++|+|||||+++||++..|....| +.++.|||++|+ ++...
T Consensus 10 ~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c--~~~~~y~~~~Ss-~~~~~---------------- 68 (323)
T 1bxo_A 10 PTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQ--SGHSVYNPSATG-KELSG---------------- 68 (323)
T ss_dssp ECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH--TTSCCBCHHHHC-EEEEE----------------
T ss_pred ecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhc--cCCCCCCcccCC-cccCC----------------
Confidence 345788999999999 899999999999999999999983334 678899999999 66544
Q ss_pred CCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh-------
Q 048503 108 DCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS------- 178 (374)
Q Consensus 108 ~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s------- 178 (374)
+.|.+.|++| +.+.|.+++|+|++++ +.++++.||++..... .| ...++||||||+...+
T Consensus 69 -~~~~i~Yg~G---s~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~~~~~ 137 (323)
T 1bxo_A 69 -YTWSISYGDG---SSASGNVFTDSVTVGG-----VTAHGQAVQAAQQISA--QFQQDTNNDGLLGLAFSSINTVQPQSQ 137 (323)
T ss_dssp -EEEEEECTTS---CEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECH--HHHTCTTCSEEEECSCGGGCCCBSSCC
T ss_pred -CeEEEEeCCC---CeEEEEEEEEEEEECC-----EEECcEEEEEEEecCc--ccccCCCCceEEEeCcccccccccCCC
Confidence 8999999999 8678999999999998 8999999999998754 33 2578999999997543
Q ss_pred --hhhhhhcc-ccCcceecccCCCcceEEEcC----CCCCCCeeeeeee-eCCceeEEEeEEEECCEEEEeeeCCCCcEE
Q 048503 179 --LISQMGTS-IAGKFSYCLPDQGSSKINFGG----IVAGAGVVSTPLI-IRDHYYLSLEAISVGNQRLEFVSSSTGNIF 250 (374)
Q Consensus 179 --~~~ql~~~-~~~~Fs~~l~~~~~G~l~~Gg----~~~~~~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~i 250 (374)
+..+|... .+++||+||.+...|.|+||| ++.+ ++.|+|+. ...+|.|.+++|.|++ . . .....++
T Consensus 138 ~~~~~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~w~v~l~~i~v~~-~-~---~~~~~ai 211 (323)
T 1bxo_A 138 TTFFDTVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTG-SLTYTGVDNSQGFWSFNVDSYTAGS-Q-S---GDGFSGI 211 (323)
T ss_dssp CCHHHHHGGGBSSSEEEEECCSSSCEEEEESSCCGGGBSS-CCEEEECBCTTSSCEEEEEEEEETT-E-E---EEEEEEE
T ss_pred CCHHHHHHHhcCCcEEEEEEeCCCCceEEEeCcChhhccC-ceEEEECCCCCCeEEEEEeeEEECC-c-c---CCCceEE
Confidence 44555443 579999999876689999999 4455 89999997 4559999999999999 2 2 3467899
Q ss_pred EecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC-
Q 048503 251 VDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD- 329 (374)
Q Consensus 251 iDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~- 329 (374)
|||||+++++|++++++|.+++.. +..... ...+.++|+. .+|+|+|+|+|.+++||+++|++...+
T Consensus 212 iDSGTs~~~lP~~~~~~l~~~i~~---a~~~~~----~g~~~~~C~~-----~~P~i~f~fgg~~~~l~~~~~~~~~~~~ 279 (323)
T 1bxo_A 212 ADTGTTLLLLDDSVVSQYYSQVSG---AQQDSN----AGGYVFDCST-----NLPDFSVSISGYTATVPGSLINYGPSGD 279 (323)
T ss_dssp ECTTCSSEEECHHHHHHHHTTSTT---CEEETT----TTEEEECTTC-----CCCCEEEEETTEEEEECHHHHEEEECSS
T ss_pred EeCCCCceeCCHHHHHHHHHhCCC---ceEcCc----CCEEEEECCC-----CCceEEEEECCEEEEECHHHeEEeccCC
Confidence 999999999999999999776632 212211 2223688984 789999999999999999999987643
Q ss_pred CeEEEE-EEcCC--CceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503 330 EIMCSA-FRGGN--ANIVYGRIMQINFLIGYDIEQAMVSFKPSR 370 (374)
Q Consensus 330 ~~~C~~-i~~~~--~~~iLG~~fl~~~y~vfD~e~~rigfa~~~ 370 (374)
...|++ |++.+ +.||||.+|||++|+|||++++|||||+++
T Consensus 280 ~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 280 GSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 468999 87753 789999999999999999999999999874
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.3e-51 Score=396.21 Aligned_cols=307 Identities=18% Similarity=0.306 Sum_probs=242.5
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGD 108 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~~ 108 (374)
...+..|+++|.||||+|+++|+|||||+++||+|..|. ..++.|||++|+|++...
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~------~~~~~y~~~~SsT~~~~~----------------- 73 (395)
T 2qp8_A 17 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP------FLHRYYQRQLSSTYRDLR----------------- 73 (395)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT------TCSCCCCGGGCTTCEEEE-----------------
T ss_pred CCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc------cccCCcCcccCCCceeCC-----------------
Confidence 345678999999999999999999999999999999886 346889999999999887
Q ss_pred CeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecC-cEEEeeeecCCCCCCC--CCCcceEeecCCCCCh-------
Q 048503 109 CSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMP-NVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS------- 178 (374)
Q Consensus 109 ~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s------- 178 (374)
|.|.+.|++| +. .|.+++|+|+|++. ..+. .+.|+++..... .| ...++||||||+...+
T Consensus 74 ~~~~i~Yg~G---s~-~G~~~~Dtv~ig~g----~~~~~~~~~~~~~~~~~--~f~~~~~~dGIlGLg~~~~s~~~~~~~ 143 (395)
T 2qp8_A 74 KGVYVPYTQG---KW-EGELGTDLVSIPHG----PNVTVRANIAAITESDK--FFINGSNWEGILGLAYAEIARPDDSLE 143 (395)
T ss_dssp EEEEEECSSC---EE-EEEEEEEEEECTTS----CSCEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred ceEEEEECCc---EE-EEEEEeEEEEECCC----CCceEEEEEEEEEccCc--ccccccCccceEEcCchhhccCCCCCC
Confidence 8999999999 76 69999999999831 2222 366777765444 34 3578999999997642
Q ss_pred -hhhhhhcc--ccCcceecccC------------CCcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEE
Q 048503 179 -LISQMGTS--IAGKFSYCLPD------------QGSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRL 239 (374)
Q Consensus 179 -~~~ql~~~--~~~~Fs~~l~~------------~~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~ 239 (374)
++.+|..+ ..++||+||.+ ...|.|+||| ++.+ ++.|+|+....+|.|.+++|+|+++.+
T Consensus 144 ~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~g~~~ 222 (395)
T 2qp8_A 144 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTG-SLWYTPIRREWYYEVIIVRVEINGQDL 222 (395)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEE-EEEEEECCSBTTBBCCEEEEEETTEEC
T ss_pred CHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccC-ceEEeccCCCceEEEEEEEEEECCEEc
Confidence 33344333 34899999964 1479999999 3444 899999998889999999999999987
Q ss_pred EeeeC--CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCC--ccccceeeccCC--CCCCeEEEEEeC
Q 048503 240 EFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPG--FSDVLCYNISSQ--PKFPEVTIHFRG 313 (374)
Q Consensus 240 ~~~~~--~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~--~~~P~i~~~f~g 313 (374)
.++.. ....++|||||++++||.+++++|.+++........... .. ...++|+..... ..+|.|+|+|+|
T Consensus 223 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~----~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g 298 (395)
T 2qp8_A 223 KMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPD----GFWLGEQLVCWQAGTTPWNIFPVISLYLMG 298 (395)
T ss_dssp CCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCH----HHHTTCSCEEESTTCCCGGGSCCEEEEEEC
T ss_pred ccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCc----cccccccccccccccchHhhCCcEEEEEcc
Confidence 54211 236899999999999999999999999987643221111 11 125789975421 148999999997
Q ss_pred c------eEEECCCceEEEeCC----CeEEEE--EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 314 A------DVKLSPSNLFRNISD----EIMCSA--FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 314 ~------~~~i~~~~y~~~~~~----~~~C~~--i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
. +|+|+|++|+.+..+ ...|++ +...++.||||.+|||++|+|||++++|||||+++|..
T Consensus 299 ~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 299 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp SSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred CCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 5 699999999988653 358973 66656889999999999999999999999999999973
No 30
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=4.2e-51 Score=403.65 Aligned_cols=308 Identities=18% Similarity=0.296 Sum_probs=246.3
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGD 108 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~~ 108 (374)
...+..|+++|+||||+|+|+|+|||||+++||++..| | ..++.|||++|+|++...
T Consensus 70 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c----c--~~~~~y~~~~SsT~~~~~----------------- 126 (455)
T 3lpj_A 70 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----P--FLHRYYQRQLSSTYRDLR----------------- 126 (455)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----T--TCSCCCCGGGCTTCEEEE-----------------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc----c--ccCCcccCCCCCCcccCC-----------------
Confidence 34556899999999999999999999999999999877 4 578899999999999887
Q ss_pred CeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC--CCCcceEeecCCCCCh--------
Q 048503 109 CSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS-------- 178 (374)
Q Consensus 109 ~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s-------- 178 (374)
+.|.+.|++| +. .|.++.|+|+|++... +.+ .+.|+++..... .| ...++||||||+...+
T Consensus 127 ~~~~i~Yg~G---s~-~G~~~~Dtv~ig~~~~--~~~-~~~~~~~~~~~~--~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 197 (455)
T 3lpj_A 127 KGVYVPYTQG---KW-EGELGTDLVSIPHGPN--VTV-RANIAAITESDK--FFINGSNWEGILGLAYAEIARPDDSLEP 197 (455)
T ss_dssp EEEEEECSSC---EE-EEEEEEEEEECTTSCS--CEE-EEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred ccEEEEeCCe---EE-EEEEEEEEEEECCCcc--eee-EEEEEEEEccCc--ccccCCCcceEEEeCccccccccCCCCc
Confidence 8999999999 76 7999999999985211 232 366888877655 44 3678999999987543
Q ss_pred hhhhhhcc--ccCcceecccC------------CCcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEE
Q 048503 179 LISQMGTS--IAGKFSYCLPD------------QGSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLE 240 (374)
Q Consensus 179 ~~~ql~~~--~~~~Fs~~l~~------------~~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~ 240 (374)
++.+|... ..++||+||.+ ...|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+.
T Consensus 198 ~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~w~v~l~~i~v~g~~~~ 276 (455)
T 3lpj_A 198 FFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTG-SLWYTPIRREWYYEVIIVRVEINGQDLK 276 (455)
T ss_dssp HHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEE-EEEEEECCSBTTBBCCEEEEEETTEECC
T ss_pred HHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccC-ceEEEecCCCceeEEEEeEEEECCEEcc
Confidence 34444443 34899999963 2479999999 3445 8999999998899999999999999876
Q ss_pred eeeC--CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCC--CccccceeeccCC--CCCCeEEEEEeCc
Q 048503 241 FVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEP--GFSDVLCYNISSQ--PKFPEVTIHFRGA 314 (374)
Q Consensus 241 ~~~~--~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~--~~~~~~C~~~~~~--~~~P~i~~~f~g~ 314 (374)
++.. ....++|||||++++||.+++++|.+++........... . ..+.++|+..... ..+|.|+|+|+|.
T Consensus 277 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~----~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~ 352 (455)
T 3lpj_A 277 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPD----GFWLGEQLVCWQAGTTPWNIFPVISLYLMGE 352 (455)
T ss_dssp CCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCH----HHHTTCSCEEESTTCCCGGGSCCEEEEEECS
T ss_pred ccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCc----ccccCcceecccccCCchhcCCcEEEEEcCC
Confidence 4211 256899999999999999999999999988754221111 1 1126899976411 1389999999986
Q ss_pred ------eEEECCCceEEEeCCC----eEEEE--EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 315 ------DVKLSPSNLFRNISDE----IMCSA--FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 315 ------~~~i~~~~y~~~~~~~----~~C~~--i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
+|+|+|++|+++..+. ..|++ +...++.||||.+|||++|+|||++++|||||+++|..
T Consensus 353 ~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 353 VTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp STTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred CcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 4999999999987542 58986 44445889999999999999999999999999999964
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=7.8e-51 Score=395.98 Aligned_cols=307 Identities=18% Similarity=0.290 Sum_probs=243.7
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCCCCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGD 108 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~~~~ 108 (374)
...+..|+++|+||||+|+|+|+|||||+++||++..| | ..++.|+|++|+|++...
T Consensus 24 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c----~--~~~~~y~~~~SsT~~~~~----------------- 80 (402)
T 3vf3_A 24 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----P--FLHRYYQRQLSSTYRDLR----------------- 80 (402)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----T--TCSCCCCGGGCTTCEEEE-----------------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC----C--cccCCcCcccCcccccCC-----------------
Confidence 34456899999999999999999999999999999887 4 567899999999999887
Q ss_pred CeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecC-cEEEeeeecCCCCCCC--CCCcceEeecCCCCCh-------
Q 048503 109 CSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMP-NVIFGCGHKNLASPTS--DSKQTGIIGLGPGNSS------- 178 (374)
Q Consensus 109 ~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s------- 178 (374)
+.|.+.|++| +. .|.+++|+|.|++. ..+. .+.|+++..... .| ...++||||||+...+
T Consensus 81 ~~~~i~Yg~G---s~-~G~~~~D~v~ig~~----~~~~~~~~~~~~~~~~~--~~~~~~~~dGIlGLg~~~~s~~~~~~~ 150 (402)
T 3vf3_A 81 KGVYVPYTQG---KW-EGELGTDLVSIPHG----PNVTVRANIAAITESDK--FFINGSNWEGILGLAYAEIARPDDSLE 150 (402)
T ss_dssp EEEEEECSSC---EE-EEEEEEEEEECTTS----CSCEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred CEEEEEECcE---EE-EEEEEEEEEEECCc----cccceeeeEEEEEcccc--ccccCCCccceEEcCchhhcccCCcCC
Confidence 8999999999 75 79999999999842 2222 245777766554 34 4678999999987543
Q ss_pred -hhhhhhcc--ccCcceecccC------------CCcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEE
Q 048503 179 -LISQMGTS--IAGKFSYCLPD------------QGSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRL 239 (374)
Q Consensus 179 -~~~ql~~~--~~~~Fs~~l~~------------~~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~ 239 (374)
++.+|... ..++||+||.+ ...|.|+||| ++.+ ++.|+|+....+|.|.+++|.|+++.+
T Consensus 151 ~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~w~v~l~~i~v~g~~~ 229 (402)
T 3vf3_A 151 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTG-SLWYTPIRREWYYEVIIVRVEINGQDL 229 (402)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEE-EEEEEECSSBTTBEECEEEEEETTEEC
T ss_pred cHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccC-ceEEEeCCcCcEEEEEEeEEEECCEEe
Confidence 44455444 34899999963 1479999999 3445 899999999889999999999999987
Q ss_pred EeeeC--CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCC--ccccceeeccCC--CCCCeEEEEEeC
Q 048503 240 EFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPG--FSDVLCYNISSQ--PKFPEVTIHFRG 313 (374)
Q Consensus 240 ~~~~~--~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~--~~~P~i~~~f~g 313 (374)
.++.. ....++|||||++++||.+++++|.+++.+......... .. .+.++|+..... ..+|.|+|+|+|
T Consensus 230 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~----~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g 305 (402)
T 3vf3_A 230 KMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPD----GFWLGEQLVCWQAGTTPWNIFPVISLYLMG 305 (402)
T ss_dssp CCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCT----TGGGTCSCEEEETTCCCGGGSCCEEEEEEC
T ss_pred cccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCc----cccccccccccccccchHhhCCceEEEEec
Confidence 64211 256899999999999999999999999988754221111 11 126899976421 148999999998
Q ss_pred c------eEEECCCceEEEeCCC----eEEEE--EEcCCCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 314 A------DVKLSPSNLFRNISDE----IMCSA--FRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 314 ~------~~~i~~~~y~~~~~~~----~~C~~--i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
. +++|+|++|+++..+. ..|++ +...++.||||.+|||++|+|||++++|||||+++|+.
T Consensus 306 ~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 306 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp SSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred CCCCceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 6 4999999999887542 48985 44456889999999999999999999999999999984
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=7.4e-50 Score=380.72 Aligned_cols=287 Identities=18% Similarity=0.278 Sum_probs=233.6
Q ss_pred ceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCCCC
Q 048503 26 AEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCS 105 (374)
Q Consensus 26 ~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~c~ 105 (374)
.++...+..|+++|.||||+|+++|+|||||+++||+|. +.|+|++|+++..
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------~~y~~s~Ss~~~~---------------- 56 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------KSYVKTSTSSATS---------------- 56 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------SCCCCCTTCEEEE----------------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------CccCCcCCccccC----------------
Confidence 344555789999999999999999999999999999432 4799988886543
Q ss_pred CCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCCCCCcceEeecCCCCCh-------
Q 048503 106 EGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSS------- 178 (374)
Q Consensus 106 ~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s------- 178 (374)
|.|.+.|++| + +.|.+++|+|+|++ +.++++.||++..... | ..++||||||+...+
T Consensus 57 ---~~~~i~Yg~G---s-~~G~~~~Dtv~~g~-----~~v~~~~fg~~~~~~~---~-~~~~GilGLg~~~~s~~~~~~~ 120 (340)
T 1wkr_A 57 ---DKVSVTYGSG---S-FSGTEYTDTVTLGS-----LTIPKQSIGVASRDSG---F-DGVDGILGVGPVDLTVGTLSPH 120 (340)
T ss_dssp ---EEEEEECSSC---E-EEEEEEEEEEEETT-----EEEEEEEEEEEEEEES---C-TTCSEEEECSCGGGGTTSEESC
T ss_pred ---ceEEEEECCc---E-EEEEEEEEEEEECC-----EEEcceEEEEEEccCC---C-cCCCcEEECCcccccccccccc
Confidence 8999999999 7 56999999999998 8999999999998653 3 468999999987643
Q ss_pred -------hhhhhhc---cccCcceecccCC-----CcceEEEcC----CCCCCCeeeeeeee----CCceeEEEeEEEEC
Q 048503 179 -------LISQMGT---SIAGKFSYCLPDQ-----GSSKINFGG----IVAGAGVVSTPLII----RDHYYLSLEAISVG 235 (374)
Q Consensus 179 -------~~~ql~~---~~~~~Fs~~l~~~-----~~G~l~~Gg----~~~~~~l~~~p~~~----~~~w~v~l~~i~v~ 235 (374)
++.+|.. +.+++||+||.+. ..|.|+||| ++.+ ++.|+|+.. ..+|.|. .+|.|+
T Consensus 121 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~~~w~v~-~~i~v~ 198 (340)
T 1wkr_A 121 TSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTG-SITYTPITSTSPASAYWGIN-QSIRYG 198 (340)
T ss_dssp TTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSS-CCEEEECCSSTTGGGSSEEE-EEEEET
T ss_pred ccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhccc-ceEEEECccCCCCcceEEEE-eeEEEC
Confidence 2334433 3579999999852 479999999 3455 899999998 4599999 999999
Q ss_pred C-EEEEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCc
Q 048503 236 N-QRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGA 314 (374)
Q Consensus 236 ~-~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~ 314 (374)
+ +.+.. ...++|||||++++||.+++++|.+++.+.. ... ...+.++|.... .+|+|+|.|+|.
T Consensus 199 ~~~~l~~----~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~----~~~----~g~~~~~C~~~~---~~p~i~f~f~g~ 263 (340)
T 1wkr_A 199 SSTSILS----STAGIVDTGTTLTLIASDAFAKYKKATGAVA----DNN----TGLLRLTTAQYA---NLQSLFFTIGGQ 263 (340)
T ss_dssp TTEEEEE----EEEEEECTTBCSEEECHHHHHHHHHHHTCEE----CTT----TSSEEECHHHHH---TCCCEEEEETTE
T ss_pred CCeEccC----CCeEEEeCCcccccCCHHHHHHHHHhhCCEE----cCC----CCeEEeeccccc---cCCcEEEEECCE
Confidence 8 77642 3589999999999999999999977665432 222 223478998765 789999999999
Q ss_pred eEEECCCceEEEeC-------CCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCCCCC
Q 048503 315 DVKLSPSNLFRNIS-------DEIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN 373 (374)
Q Consensus 315 ~~~i~~~~y~~~~~-------~~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~C~~ 373 (374)
+++|+|++|+++.. +...|+. +.+. +..||||.+|||++|+|||++++|||||+++|.+
T Consensus 264 ~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 264 TFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp EEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred EEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 99999999987653 2246765 6542 2469999999999999999999999999999975
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.2e-49 Score=384.69 Aligned_cols=319 Identities=20% Similarity=0.397 Sum_probs=238.3
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCC--------CCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCP--------ELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVV 100 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~--------~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~ 100 (374)
+..+.+|+++|.|||| |+|||||+++||+|..|. ...| ..+..|++.. +++.....
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C--~~~~~~~~~s-c~~~~~~~-------- 73 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTC--LLANAYPAPG-CPAPSCGS-------- 73 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHH--HHHHSSCCTT-CCCCCC----------
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchh--ccccCCCCCC-CCCccCCc--------
Confidence 5778899999999998 999999999999986542 1123 1223344431 12110000
Q ss_pred CCCCCCCCC-eeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcE----EEeeeecCCCCCCCCCCcceEeecCCC
Q 048503 101 TSNCSEGDC-SYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNV----IFGCGHKNLASPTSDSKQTGIIGLGPG 175 (374)
Q Consensus 101 ~~~c~~~~~-~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~----~fg~~~~~~~~~~~~~~~~GilGLg~~ 175 (374)
.|++..| .|.+.|++| +.+.|.+++|+|++++.++. +.++++ .|||+...... .+...+|||||||+.
T Consensus 74 --~~~~~~c~~f~i~YgdG---s~~~G~l~~Dtv~ig~~~g~-~~v~~~~~~~~Fg~~~~~~~~-~~~~~~dGIlGLg~~ 146 (381)
T 1t6e_X 74 --DKHDKPCTAYPYNPVSG---ACAAGSLSHTRFVANTTDGS-KPVSKVNVGVLAACAPSKLLA-SLPRGSTGVAGLANS 146 (381)
T ss_dssp ------CBCEECCBCTTTC---CBCCEEEEEEEEEEEEESSS-SEEEEEEEEEEEEECCGGGGT-TSCTTEEEEEECSSS
T ss_pred --CcCCCccccccccccCC---ceeeEEEEEEEEEeeccCCC-ccccceeeeeEeecCcccccC-CCCCCCceEEEeCCC
Confidence 0001125 599999999 87779999999999864321 344454 67999876321 234789999999999
Q ss_pred CChhhhhhhcc--ccCcceecccCCCcceEEEcCCCC-----CCCeeeeeeeeC---CceeEEEeEEEECCEEEEeeeCC
Q 048503 176 NSSLISQMGTS--IAGKFSYCLPDQGSSKINFGGIVA-----GAGVVSTPLIIR---DHYYLSLEAISVGNQRLEFVSSS 245 (374)
Q Consensus 176 ~~s~~~ql~~~--~~~~Fs~~l~~~~~G~l~~Gg~~~-----~~~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~~~~ 245 (374)
..+++.||... .+++||+||.+...|.|+|||... .+++.|+|++.. .+|.|.+++|+|+++.+.++...
T Consensus 147 ~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 226 (381)
T 1t6e_X 147 GLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGA 226 (381)
T ss_dssp TTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTC
T ss_pred cchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHH
Confidence 99999998764 579999999875689999999321 248999999875 36779999999999887542110
Q ss_pred --CCcEEEecCcceeecChHHHHHHHHHHHhhhcc--------CcccCCCCCCCccccceeeccCC------CCCCeEEE
Q 048503 246 --TGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKA--------QPVKGVGAEPGFSDVLCYNISSQ------PKFPEVTI 309 (374)
Q Consensus 246 --~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~--------~~~~~~~~~~~~~~~~C~~~~~~------~~~P~i~~ 309 (374)
...+||||||++++||++++++|.+++.+++.. .+... ....+.+|+..... ..+|+|+|
T Consensus 227 ~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~C~~~~~~~~~~~~~~~P~i~f 302 (381)
T 1t6e_X 227 LATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVE----AVAPFGVCYDTKTLGNNLGGYAVPNVQL 302 (381)
T ss_dssp SCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEEC----CCTTCSCEEEGGGCCEETTEECCCCEEE
T ss_pred ccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCC----CCCCCCccCCCCCCcccccCCcCCeEEE
Confidence 357999999999999999999999999887642 11101 22236789976421 26899999
Q ss_pred EEe-CceEEECCCceEEEeCCCeEEEEEEcCC---------CceeecccceeeeEEEEECCCCEEEEee----CCCCCC
Q 048503 310 HFR-GADVKLSPSNLFRNISDEIMCSAFRGGN---------ANIVYGRIMQINFLIGYDIEQAMVSFKP----SRCTNY 374 (374)
Q Consensus 310 ~f~-g~~~~i~~~~y~~~~~~~~~C~~i~~~~---------~~~iLG~~fl~~~y~vfD~e~~rigfa~----~~C~~~ 374 (374)
+|+ |.+|+|++++|++...++..|++|+..+ +.||||..|||++|+|||++++|||||+ +.|+|+
T Consensus 303 ~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~~~~cs~~ 381 (381)
T 1t6e_X 303 GLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381 (381)
T ss_dssp EETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC-
T ss_pred EECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccCCCCCCCC
Confidence 998 5999999999999876677999977653 4799999999999999999999999997 458775
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-40 Score=299.07 Aligned_cols=218 Identities=22% Similarity=0.380 Sum_probs=184.1
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC-CCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPE-LDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSN 103 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~-~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~ 103 (374)
.++.++.+.+|+++|.||||+|+|+|+|||||+++||+|..|.. ..| ..++.|||++|+|++...
T Consensus 5 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~------------ 70 (239)
T 1b5f_A 5 VALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKAC--RAHSMYESSDSSTYKENG------------ 70 (239)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCccc--CCCCCCCCccCCCeeeCC------------
Confidence 45667889999999999999999999999999999999999962 368 457899999999999876
Q ss_pred CCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh--hh
Q 048503 104 CSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS--LI 180 (374)
Q Consensus 104 c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s--~~ 180 (374)
+.+.+.|++| + +.|.++.|+|.+++ +.++++.||++...... .| ...++||||||+...+ +.
T Consensus 71 -----~~~~i~Yg~G---s-~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 71 -----TFGAIIYGTG---S-ITGFFSQDSVTIGD-----LVVKEQDFIEATDEADN-VFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp -----EEEEEECSSC---E-EEEEEEEEEEEETT-----EEEEEEEEEEEEEECHH-HHTTCSCCEEEECSCCSSSCCHH
T ss_pred -----cEEEEEECCC---c-EEEEEEEEEEEECC-----cEEccEEEEEEEeccCc-cccccCcceEEecCccccccHHH
Confidence 8999999999 7 46999999999998 89999999999876531 23 4678999999999876 22
Q ss_pred hhh---hccccCcceecccCC----CcceEEEcCC----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCcE
Q 048503 181 SQM---GTSIAGKFSYCLPDQ----GSSKINFGGI----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNI 249 (374)
Q Consensus 181 ~ql---~~~~~~~Fs~~l~~~----~~G~l~~Gg~----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 249 (374)
.+| +.+..++||+||.+. ..|.|+|||. +.+ ++.|+|+....+|.|.+++|.|+++.+.+ ......+
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~~-~~~~~~a 213 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRG-DHTYVPVTYQYYWQFGIGDVLIGDKSTGF-CAPGCQA 213 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEE-EEEEEEEEEETTEEEEECCEEETTEECCT-TTTCEEE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccC-ceEEEEcccCCeEEEEeeEEEECCEEecc-cCCCCEE
Confidence 223 334679999999873 4799999993 344 89999999988999999999999988653 1345789
Q ss_pred EEecCcceeecChHHHHHHHHHHH
Q 048503 250 FVDTGVLRTLLPLEYHSNLKSVMS 273 (374)
Q Consensus 250 iiDTGt~~i~lp~~~~~~i~~~l~ 273 (374)
+|||||++++||.+++++|.+++.
T Consensus 214 iiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 214 FADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EECTTCSSEEECHHHHHHHHHHTT
T ss_pred EEecCcchhhCCHHHHHHHHHHhC
Confidence 999999999999999999987764
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=4.7e-36 Score=271.84 Aligned_cols=212 Identities=20% Similarity=0.355 Sum_probs=175.6
Q ss_pred eecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh------hhhhhhc---cccCcceecccCC--C--cceEEEcCC
Q 048503 143 VEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS------LISQMGT---SIAGKFSYCLPDQ--G--SSKINFGGI 208 (374)
Q Consensus 143 ~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s------~~~ql~~---~~~~~Fs~~l~~~--~--~G~l~~Gg~ 208 (374)
++++++.||++...... .| ...++||||||+...+ ++.+|.. +.+++||+||.+. . .|.|+|||.
T Consensus 3 ~~v~~~~Fg~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 3 VKVERQVFGEATKQPGI-TFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEEECCSS-TTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred eEECCeEEEEEEEccCC-ccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 78899999999987652 34 5789999999998654 3445444 3679999999886 2 799999993
Q ss_pred ----CCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCC
Q 048503 209 ----VAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGV 284 (374)
Q Consensus 209 ----~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~ 284 (374)
+.+ ++.|+|+....+|.|.+++|+|+++.+.. .....+++||||+++++|.+++++|.+++.+. ....
T Consensus 82 d~~~~~g-~l~~~p~~~~~~~~v~l~~i~v~~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~- 153 (241)
T 1lya_B 82 DSKYYKG-SLSYLNVTRKAYWQVHLDQVEVASGLTLC--KEGCEAIVDTGTSLMVGPVDEVRELQKAIGAV----PLIQ- 153 (241)
T ss_dssp CGGGEEE-EEEEEECSSBTTBEEEEEEEEETTSCEES--TTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----EEET-
T ss_pred CHHHcCC-ceEEEECccccEEEEEEeEEEECCeeEec--cCCCEEEEECCCccccCCHHHHHHHHHHhCCe----eccC-
Confidence 344 89999999888999999999999987542 56678999999999999999999998887543 2222
Q ss_pred CCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC--CeEEEE-EEcC------CCceeecccceeeeEE
Q 048503 285 GAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD--EIMCSA-FRGG------NANIVYGRIMQINFLI 355 (374)
Q Consensus 285 ~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~-i~~~------~~~~iLG~~fl~~~y~ 355 (374)
+.+ .++|+... .+|+|+|+|+|.+++|+|++|++...+ +..|++ |++. ++.||||.+|||++|+
T Consensus 154 ---g~~-~~~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~ 226 (241)
T 1lya_B 154 ---GEY-MIPCEKVS---TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYT 226 (241)
T ss_dssp ---TEE-EEEGGGGG---GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEE
T ss_pred ---CcE-EEECCCCc---cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEE
Confidence 333 78999765 799999999999999999999998753 468997 8764 3689999999999999
Q ss_pred EEECCCCEEEEeeCC
Q 048503 356 GYDIEQAMVSFKPSR 370 (374)
Q Consensus 356 vfD~e~~rigfa~~~ 370 (374)
|||.+++|||||+++
T Consensus 227 vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 227 VFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEEcC
Confidence 999999999999875
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.86 E-value=4.3e-22 Score=153.38 Aligned_cols=90 Identities=31% Similarity=0.474 Sum_probs=81.3
Q ss_pred cceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCC
Q 048503 25 QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPE--LDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTS 102 (374)
Q Consensus 25 ~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~--~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~ 102 (374)
+++.++.+..|+++|.||||+|+|.|+|||||+++||++..|.. ..| ..++.|||++|+|++...
T Consensus 5 ~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C--~~~~~y~p~~SsT~~~~~----------- 71 (97)
T 1lya_A 5 EVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIAC--WIHHKYNSDKSSTYVKNG----------- 71 (97)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred EeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCccccc--CCCCCCCchhCCCceeCC-----------
Confidence 45566889999999999999999999999999999999999973 368 467899999999999887
Q ss_pred CCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEec
Q 048503 103 NCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNS 137 (374)
Q Consensus 103 ~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~ 137 (374)
+.|.+.|++| + +.|.++.|+|.|++
T Consensus 72 ------~~~~i~Yg~G---s-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------TSFDIHYGSG---S-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------EEEEEECSSC---E-EEEEEEEEEEEESC
T ss_pred ------CcEEEEECCc---E-EEEEEEEEEEEECC
Confidence 8999999999 8 57999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.71 E-value=1e-17 Score=126.52 Aligned_cols=76 Identities=18% Similarity=0.413 Sum_probs=67.3
Q ss_pred ccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCC--CeEEEE-EEcC-----CCceeecccceeeeEEEEECCCCE
Q 048503 292 DVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISD--EIMCSA-FRGG-----NANIVYGRIMQINFLIGYDIEQAM 363 (374)
Q Consensus 292 ~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~-i~~~-----~~~~iLG~~fl~~~y~vfD~e~~r 363 (374)
.++|+... .+|+|+|+|+|.+++|+|++|+..... ...|++ |++. ++.||||..|||++|+|||.+++|
T Consensus 4 ~v~C~~~~---~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~r 80 (87)
T 1b5f_B 4 QVDCNTLS---SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLL 80 (87)
T ss_dssp EECGGGGG---GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTE
T ss_pred EEECCCCC---cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCE
Confidence 78999765 799999999999999999999988653 468998 8763 368999999999999999999999
Q ss_pred EEEeeCC
Q 048503 364 VSFKPSR 370 (374)
Q Consensus 364 igfa~~~ 370 (374)
||||+++
T Consensus 81 iGfA~~~ 87 (87)
T 1b5f_B 81 VGFAEAA 87 (87)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999874
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.38 E-value=0.14 Score=41.37 Aligned_cols=102 Identities=14% Similarity=0.213 Sum_probs=58.5
Q ss_pred EEEECCEEEEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhc-cCccc--CCCCCCCccccceeeccCCCCCCeE
Q 048503 231 AISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIK-AQPVK--GVGAEPGFSDVLCYNISSQPKFPEV 307 (374)
Q Consensus 231 ~i~v~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~-~~~~~--~~~~~~~~~~~~C~~~~~~~~~P~i 307 (374)
.+.|||+.+ .+++|||++.+.++.+..+.+ .-... ..... ..|..+. .+.. .....
T Consensus 30 ~v~InG~~~--------~~LvDTGAs~s~is~~~a~~l----gl~~~~~~~~~~~a~g~g~~----~~~~-----~~~~~ 88 (148)
T 2i1a_A 30 NIEINNYPV--------KAFVDTGAQTTIMSTRLAKKT----GLSRMIDKRFIGEARGVGTG----KIIG-----RIHQA 88 (148)
T ss_dssp EEEETTEEE--------EEEECTTCSSCEEEHHHHHHH----TGGGGCBCCCC---------------CE-----EEEEE
T ss_pred EEEECCEEE--------EEEEECCCCccccCHHHHHHc----CCCccCCcceEEEEecCCCc----cccc-----EEEEE
Confidence 367888865 469999999999999876655 21111 00100 0000000 0100 11223
Q ss_pred EEEEeCceEEECCCceEEEeCCCeEEEEEEcCCCceeecccceeeeEEEEECCCCEEEEe
Q 048503 308 TIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFK 367 (374)
Q Consensus 308 ~~~f~g~~~~i~~~~y~~~~~~~~~C~~i~~~~~~~iLG~~fl~~~y~vfD~e~~rigfa 367 (374)
.+.+++..+.+ ++. +.+.+...|||..||+++-+..|+++++|-|.
T Consensus 89 ~i~ig~~~~~~---~~~-----------vl~~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 89 QVKIETQYIPC---SFT-----------VLDTDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEEETTEEEEE---EEE-----------EECSSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred EEEECCEEece---eEE-----------EecCCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 45555544321 111 22223568999999999999999999999885
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.19 E-value=0.048 Score=44.17 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=27.7
Q ss_pred eeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCC
Q 048503 29 ISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 29 ~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~ 64 (374)
....+.+++++.|+ ++++++++|||++.+.+...
T Consensus 21 ~~~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 21 FTQVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp --CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred hcccceEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 34566789999998 88999999999999988543
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.66 E-value=0.14 Score=41.53 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=59.8
Q ss_pred EEECCEEEEeeeCCCCcEEEecCcceeecChHHHHHHHHHHHhhhccCcc-cCCCCCCCccccceeeccCCCCCCeEEEE
Q 048503 232 ISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPV-KGVGAEPGFSDVLCYNISSQPKFPEVTIH 310 (374)
Q Consensus 232 i~v~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~C~~~~~~~~~P~i~~~ 310 (374)
+.||++.+ .+++|||++.+.++.+..+++- +......... ... +.. ...+.. ..+...++
T Consensus 29 ~~Ing~~v--------~~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~---g~G-~~~~~g-----~v~~~~I~ 89 (148)
T 3s8i_A 29 CKVNGHPL--------KAFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAK---GVG-TQRIIG-----RVHLAQIQ 89 (148)
T ss_dssp EEETTEEE--------EEEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECC---C----CEEEE-----EEEEEEEE
T ss_pred EEECCEEE--------EEEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEE---cCC-ccEEEE-----EEEEEEEE
Confidence 55788865 4699999999999999777661 1000000000 000 000 111111 12334445
Q ss_pred EeCceEEECCCceEEEeCCCeEEEE-EEcC-CCceeecccceeeeEEEEECCCCEEEEee
Q 048503 311 FRGADVKLSPSNLFRNISDEIMCSA-FRGG-NANIVYGRIMQINFLIGYDIEQAMVSFKP 368 (374)
Q Consensus 311 f~g~~~~i~~~~y~~~~~~~~~C~~-i~~~-~~~~iLG~~fl~~~y~vfD~e~~rigfa~ 368 (374)
+++..+ .|-. +.+. +...+||..||+++-.+.|+++++|-|.+
T Consensus 90 Ig~~~~---------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 90 IEGDFL---------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp ETTEEE---------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred ECCEEE---------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 544432 1323 3333 35789999999999999999999998864
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.97 E-value=0.64 Score=34.76 Aligned_cols=28 Identities=29% Similarity=0.234 Sum_probs=24.4
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQCEP 65 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~ 65 (374)
++.|.|| .|.+++++|||..+|.+...+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5679999 899999999999999996543
No 42
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=87.74 E-value=0.43 Score=38.60 Aligned_cols=40 Identities=10% Similarity=0.009 Sum_probs=27.7
Q ss_pred cccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCC
Q 048503 23 IYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 23 ~~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~ 64 (374)
.+.|..--...-+++++.|. .+++++++|||++.+.+...
T Consensus 13 ~~~~~~~~~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 13 GLVPRGSGQVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp ---------CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CcCceeccccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45555555666789999998 89999999999999999654
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.78 E-value=0.62 Score=35.20 Aligned_cols=26 Identities=19% Similarity=0.142 Sum_probs=23.5
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQC 63 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~ 63 (374)
++.|.|| .|.+.+++|||+.+|.+..
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 5789999 8999999999999999973
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=85.82 E-value=0.97 Score=33.72 Aligned_cols=28 Identities=18% Similarity=0.070 Sum_probs=24.4
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQCEP 65 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~ 65 (374)
++.|.|| +|.+.+++|||..+|.+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 5779999 999999999999999996543
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.24 E-value=1.3 Score=33.73 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=25.5
Q ss_pred EEEEEec---CCCceEEEEEEcCCCceeEeCCCC
Q 048503 36 LMHLSIG---TPPVDIFGSVDTGSDCTWTQCEPC 66 (374)
Q Consensus 36 ~~~v~iG---tP~Q~~~~~iDTgS~~twv~~~~c 66 (374)
.+.|.|| +|+|.+..++|||..+|.++..++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4556666 789999999999999999976654
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=79.07 E-value=1.7 Score=33.39 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=23.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~~ 64 (374)
++ |.|| .|.+.+++|||..+|.+...
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 45 8999 89999999999999999654
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=75.80 E-value=2.6 Score=32.22 Aligned_cols=29 Identities=24% Similarity=0.278 Sum_probs=25.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCCCC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQCEPC 66 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c 66 (374)
.+.|.|| .|.+..++|||..+|-+...+.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5678999 8999999999999999976543
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=74.56 E-value=3.6 Score=32.37 Aligned_cols=28 Identities=21% Similarity=0.175 Sum_probs=24.3
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEeCC
Q 048503 35 YLMHLSIGTPPVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 35 y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~ 64 (374)
-++.+.|+ .|.+++++|||.+++.+...
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 46779999 89999999999999999644
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=65.49 E-value=6.7 Score=33.21 Aligned_cols=27 Identities=30% Similarity=0.214 Sum_probs=24.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~~ 64 (374)
.+.|.|| .|.+.+++|||..+|.+..-
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 6789999 89999999999999999543
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=63.66 E-value=6.6 Score=30.47 Aligned_cols=24 Identities=29% Similarity=0.235 Sum_probs=20.0
Q ss_pred ecCCCceEEEEEEcCCCceeEeCCCC
Q 048503 41 IGTPPVDIFGSVDTGSDCTWTQCEPC 66 (374)
Q Consensus 41 iGtP~Q~~~~~iDTgS~~twv~~~~c 66 (374)
|| .|.+..++|||..+|.+...+.
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 7888999999999999976543
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.24 E-value=28 Score=29.35 Aligned_cols=27 Identities=30% Similarity=0.214 Sum_probs=24.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEeCC
Q 048503 36 LMHLSIGTPPVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 36 ~~~v~iGtP~Q~~~~~iDTgS~~twv~~~ 64 (374)
.+.+.|| .|.+..++|||..+|-+..-
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cEEEEEC--CEEEeeeecccCCceeeecc
Confidence 6789999 89999999999999999544
No 52
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=38.32 E-value=33 Score=24.99 Aligned_cols=26 Identities=27% Similarity=0.397 Sum_probs=19.7
Q ss_pred EEEEC--CEEEEeeeCCCCcEEEecCcceeecChHH
Q 048503 231 AISVG--NQRLEFVSSSTGNIFVDTGVLRTLLPLEY 264 (374)
Q Consensus 231 ~i~v~--~~~~~~~~~~~~~~iiDTGt~~i~lp~~~ 264 (374)
.|.|| .+.+ .++||||++.+++|...
T Consensus 18 ~i~iGTP~Q~~--------~v~~DTGSs~lWv~~~~ 45 (97)
T 1lya_A 18 EIGIGTPPQCF--------TVVFDTGSSNLWVPSIH 45 (97)
T ss_dssp EEEETTTTEEE--------EEEEETTCCCEEEEBTT
T ss_pred EEEECCCCeEE--------EEEEeCCCCceEEeEcC
Confidence 46777 4443 57999999999999753
No 53
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=28.57 E-value=45 Score=30.01 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=26.5
Q ss_pred eCceEEEE---EEecC---CCceEEEEEEcCCCceeEeCCC
Q 048503 31 VDDIYLMH---LSIGT---PPVDIFGSVDTGSDCTWTQCEP 65 (374)
Q Consensus 31 ~~~~y~~~---v~iGt---P~Q~~~~~iDTgS~~twv~~~~ 65 (374)
..++|.++ |.||. +.....++||||++.++++...
T Consensus 191 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~ 231 (329)
T 3c9x_A 191 SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNV 231 (329)
T ss_dssp TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHH
Confidence 35667765 67875 2467899999999999997663
No 54
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=25.46 E-value=65 Score=27.47 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=24.2
Q ss_pred CceEEEE---EEecCC-----CceEEEEEEcCCCceeEeCC
Q 048503 32 DDIYLMH---LSIGTP-----PVDIFGSVDTGSDCTWTQCE 64 (374)
Q Consensus 32 ~~~y~~~---v~iGtP-----~Q~~~~~iDTgS~~twv~~~ 64 (374)
.++|.+. |.||.- .....++||||++.++++..
T Consensus 187 ~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 187 QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 3567665 678752 34578999999999999654
No 55
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=22.14 E-value=65 Score=23.90 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=25.9
Q ss_pred eeEEEeEEEECCEEEEeeeCCCCcEEEecCcceeecChHHHHH
Q 048503 225 YYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSN 267 (374)
Q Consensus 225 w~v~l~~i~v~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~~~ 267 (374)
|.=.+-.+.|+|+.+ .+++|||+..+.+.......
T Consensus 6 ~~RP~v~v~I~Gq~~--------e~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL--------NVLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp SSCCEEEEEETTEEE--------EEEECTTCSSCEEEHHHHHH
T ss_pred cCCCEEEEEECCEEE--------EEEeccCCCcEEEccccCcc
Confidence 333445688999865 46999999999999875544
No 56
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=20.96 E-value=90 Score=27.86 Aligned_cols=41 Identities=22% Similarity=0.318 Sum_probs=27.9
Q ss_pred eeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCCcEEEecCcceeecChHHH
Q 048503 214 VVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYH 265 (374)
Q Consensus 214 l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~iiDTGt~~i~lp~~~~ 265 (374)
+...|+..+..|. ..|.||.+++ .++||||++.+++|....
T Consensus 6 v~~~~~~~~~~Y~---~~i~iG~Q~~--------~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 6 ATNTPTANDEEYI---TPVTIGGTTL--------NLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEEECGGGSCEE---EEEEETTEEE--------EEEEETTCCCEEECBTTS
T ss_pred eeeeecCCCCEEE---EEEEECCEEE--------EEEEeCCCcceEEecCCC
Confidence 4445554444665 4577885554 569999999999997644
Done!