Your job contains 1 sequence.
>048509
MSVNLSPQICESKLKPIYLIPLLRNLGGEKFIVFASSVANSPKTLKAFRGKGHMQVLVCS
DAMTSGMDVERAAYIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLYMFQVKRFKKLLQQ
ADHDSCPVHSIPSSSIESLRPIYKSEYVESQANRKRKIGFKLSRMVKG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048509
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130839 - symbol:RH1 "RNA helicase 1" species:... 246 5.4e-28 2
UNIPROTKB|F1MGC9 - symbol:DDX51 "Uncharacterized protein"... 160 8.1e-11 1
UNIPROTKB|E2R5R1 - symbol:DDX51 "Uncharacterized protein"... 148 2.0e-09 1
UNIPROTKB|Q8N8A6 - symbol:DDX51 "ATP-dependent RNA helica... 145 4.5e-09 1
RGD|1309580 - symbol:Ddx51 "DEAD (Asp-Glu-Ala-Asp) box po... 144 5.3e-09 1
ZFIN|ZDB-GENE-040927-28 - symbol:ddx51 "DEAD (Asp-Glu-Ala... 144 5.6e-09 1
MGI|MGI:1916913 - symbol:Ddx51 "DEAD (Asp-Glu-Ala-Asp) bo... 137 3.0e-08 1
FB|FBgn0004556 - symbol:Dbp73D "Dead box protein 73D" spe... 117 7.6e-07 2
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli... 121 3.7e-06 1
UNIPROTKB|E1BUI4 - symbol:DDX51 "Uncharacterized protein"... 120 1.1e-05 1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 111 3.7e-05 2
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 83 4.6e-05 2
POMBASE|SPCC285.03 - symbol:SPCC285.03 "ATP-dependent RNA... 111 0.00029 1
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ... 111 0.00031 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 90 0.00033 2
WB|WBGene00019219 - symbol:H20J04.4 species:6239 "Caenorh... 106 0.00071 2
>TAIR|locus:2130839 [details] [associations]
symbol:RH1 "RNA helicase 1" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0006626 "protein
targeting to mitochondrion" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=TAS] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 GO:GO:0017151 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z97339 GO:GO:0008026 eggNOG:COG0513
PROSITE:PS51195 EMBL:AL161542 KO:K14807 HOGENOM:HOG000239572
OMA:CSKTELE EMBL:Y11187 EMBL:Y11154 IPI:IPI00538787 PIR:A71424
PIR:E85175 RefSeq:NP_193320.6 UniGene:At.33
ProteinModelPortal:Q7FGZ2 SMR:Q7FGZ2 STRING:Q7FGZ2 PaxDb:Q7FGZ2
PRIDE:Q7FGZ2 EnsemblPlants:AT4G15850.1 GeneID:827266
KEGG:ath:AT4G15850 GeneFarm:907 TAIR:At4g15850 InParanoid:Q7FGZ2
Genevestigator:Q7FGZ2 GermOnline:AT4G15850 Uniprot:Q7FGZ2
Length = 522
Score = 246 (91.7 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 62/134 (46%), Positives = 80/134 (59%)
Query: 43 KTLKAFRGKGHMQVLVCSDAMTSGMDVERAA---------YIKTYIHRAGPRARAGQNGH 93
K LKAFR KG +QVLV SDA+T GMDV+ + KT+IHRAG ARAGQ G
Sbjct: 379 KELKAFR-KGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGR 437
Query: 94 CFTLLPKDEDKLLYMFQVKRFKKLLQQADHDSCPVHSIPSSSIESLRPIYK------SEY 147
CFTLL E V+RF KLL++ DSCP++ IP +S++S+R Y E
Sbjct: 438 CFTLLSNHE--------VRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPALEKLKEL 489
Query: 148 VESQANRKRKIGFK 161
VES+A +K + F+
Sbjct: 490 VESEAPKKGRQAFR 503
Score = 96 (38.9 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 9 ICESKLKPIYLIPLLRNLGGEKFIVFASSVANSPKTLK 46
ICE+ +KP+YL+ LL++ GEK I+F SSV + + K
Sbjct: 316 ICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCK 353
>UNIPROTKB|F1MGC9 [details] [associations]
symbol:DDX51 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 OMA:HIDQTPG GeneTree:ENSGT00550000075141
EMBL:DAAA02044956 IPI:IPI01003566 ProteinModelPortal:F1MGC9
Ensembl:ENSBTAT00000022893 Uniprot:F1MGC9
Length = 546
Score = 160 (61.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 1 MSVNLSPQIC--ESKLKPIYLIPLLRNLGGEKFIVFASSVANSPKT--LKAFRGKGHMQV 56
+ +N S +C S+ L L++ GG F+S + LK F +G +Q+
Sbjct: 380 LEMNFSRVLCFTNSRENSHRLFLLVQAFGGVTVAEFSSRYGPGQRKSILKQFE-QGKIQL 438
Query: 57 LVCSDAMTSGMDVERAA---------YIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLY 107
L+ +DAM G+DV+ Y++TY+HR G ARAG++G FTLL K
Sbjct: 439 LISTDAMARGIDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFTLLLK------- 491
Query: 108 MFQVKRFKKLLQQADHDSCPVHSIPSSSIESLRPIYKS--EYVESQANRKRK 157
Q +RF ++L++ H PS ++ L P Y+ +E +RK
Sbjct: 492 -VQERRFLRMLEEGGVPGLERHDTPSELLQPLVPQYEEALSLLEKAVKEERK 542
>UNIPROTKB|E2R5R1 [details] [associations]
symbol:DDX51 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 KO:K14807 OMA:HIDQTPG GeneTree:ENSGT00550000075141
CTD:317781 EMBL:AAEX03014583 RefSeq:XP_543351.2
Ensembl:ENSCAFT00000010222 GeneID:486226 KEGG:cfa:486226
Uniprot:E2R5R1
Length = 631
Score = 148 (57.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 51/169 (30%), Positives = 78/169 (46%)
Query: 4 NLSPQIC--ESKLKPIYLIPLLRNLGGEKFIVFASSVANSPK--TLKAFRGKGHMQVLVC 59
N S +C S+ L L++ GG F+S + LK F +G +Q+L+
Sbjct: 468 NFSRVLCFTNSRENSHRLFLLVQAFGGVAAAEFSSRCRPGQRKVVLKQFE-QGKIQLLIS 526
Query: 60 SDAMTSGMDVERAA---------YIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLYMFQ 110
+DAM G+DV+ Y++TY+HR G ARAG+ G FTLL K Q
Sbjct: 527 TDAMARGIDVQGVQLVINYDAPQYLRTYVHRVGRTARAGRTGQAFTLLLK--------VQ 578
Query: 111 VKRFKKLLQQADHDSCPVHSIPSSSIESLRPIYKS--EYVESQANRKRK 157
+RF ++L +A H I S ++ L P Y+ +E +R+
Sbjct: 579 ERRFLQMLAEAGVPKMARHDIHSELLQPLVPRYEEALSQLEQAVKEERR 627
>UNIPROTKB|Q8N8A6 [details] [associations]
symbol:DDX51 "ATP-dependent RNA helicase DDX51"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 KO:K14807 OMA:HIDQTPG CTD:317781
HOGENOM:HOG000239572 HOVERGEN:HBG081427 OrthoDB:EOG4JM7PM
EMBL:AK097078 EMBL:AC138466 EMBL:BC012461 EMBL:BC040185
EMBL:CR936870 IPI:IPI00217541 RefSeq:NP_778236.2 UniGene:Hs.445168
ProteinModelPortal:Q8N8A6 SMR:Q8N8A6 IntAct:Q8N8A6 STRING:Q8N8A6
PhosphoSite:Q8N8A6 DMDM:229462978 PaxDb:Q8N8A6 PRIDE:Q8N8A6
Ensembl:ENST00000397333 GeneID:317781 KEGG:hsa:317781
UCSC:uc001ujy.4 GeneCards:GC12M132621 H-InvDB:HIX0018137
HGNC:HGNC:20082 HPA:HPA039503 neXtProt:NX_Q8N8A6
PharmGKB:PA134974036 InParanoid:Q8N8A6 PhylomeDB:Q8N8A6
GenomeRNAi:317781 NextBio:96442 Bgee:Q8N8A6 CleanEx:HS_DDX51
Genevestigator:Q8N8A6 GermOnline:ENSG00000185163 Uniprot:Q8N8A6
Length = 666
Score = 145 (56.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 46/152 (30%), Positives = 71/152 (46%)
Query: 19 LIPLLRNLGGEKFIVFASSVANSPKT--LKAFRGKGHMQVLVCSDAMTSGMDVERAA--- 73
L L++ GG F+S + LK F +G +Q+L+ +DA G+DV+
Sbjct: 520 LFLLVQAFGGVDVAEFSSRYGPGQRRMILKQFE-QGKIQLLISTDATARGIDVQGVELVV 578
Query: 74 ------YIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLYMFQVKRFKKLLQQADHDSCP 127
Y++TY+HR G ARAG+ G FTLL K Q +RF ++L +A
Sbjct: 579 NYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLK--------VQERRFLRMLTEAGAPELQ 630
Query: 128 VHSIPSSSIESLRPIYKS--EYVESQANRKRK 157
H + S ++ L P Y+ +E +RK
Sbjct: 631 RHELSSKLLQPLVPRYEEALSQLEESVKEERK 662
>RGD|1309580 [details] [associations]
symbol:Ddx51 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 51"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309580 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:HIDQTPG OrthoDB:EOG4JM7PM IPI:IPI00371200
Ensembl:ENSRNOT00000056729 UCSC:RGD:1309580 ArrayExpress:D3ZQ94
Uniprot:D3ZQ94
Length = 635
Score = 144 (55.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 1 MSVNLSPQIC--ESKLKPIYLIPLLRNLGGEKFIVFASSVA--NSPKTLKAFRGKGHMQV 56
+ +N S +C S+ L L + GG F+S K LK F +G +Q+
Sbjct: 469 LGMNFSRALCFTNSRENSHRLFLLAQAFGGVSVAEFSSRYGPGQRKKILKQFE-QGKIQL 527
Query: 57 LVCSDAMTSGMDVERAA---------YIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLY 107
L+ +DA G+DV+ Y++TY+HR G ARAG+ G FTLL K
Sbjct: 528 LISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLK------- 580
Query: 108 MFQVKRFKKLLQQADHDSCPVHSIPSSSIESLRPIYKS--EYVESQANRKRKI 158
Q ++F +++ +A H +P ++ L Y++ +E ++K+
Sbjct: 581 -VQERKFLQMVSEAGVPELACHEVPRKLLQPLVARYETALSQLEKTVKEEQKL 632
>ZFIN|ZDB-GENE-040927-28 [details] [associations]
symbol:ddx51 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
51" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040927-28 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
KO:K14807 EMBL:AY648772 IPI:IPI00500210 RefSeq:NP_001003864.1
UniGene:Dr.77952 ProteinModelPortal:Q6DRI7 STRING:Q6DRI7
PRIDE:Q6DRI7 GeneID:445387 KEGG:dre:445387 CTD:317781
HOGENOM:HOG000239572 HOVERGEN:HBG081427 InParanoid:Q6DRI7
OrthoDB:EOG4JM7PM NextBio:20832091 ArrayExpress:Q6DRI7
Uniprot:Q6DRI7
Length = 652
Score = 144 (55.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 1 MSVNLSPQICESKLKP----IYLIPLLRNLGGEKFIVFASSVA--NSPKTLKAFRGKGHM 54
+ + SP +C + + +YL L++ GG + F+S ++ KTLK F KG +
Sbjct: 486 LRLKFSPALCFTNSREGAHRLYL--LVKLFGGVEVAEFSSKLSPGERQKTLKDFE-KGKI 542
Query: 55 QVLVCSDAMTSGMDV---------ERAAYIKTYIHRAGPRARAGQNGHCFTLLPKDEDKL 105
+L+ +DA G+D+ + YI+TYIHR G ARAG+ G FT L K
Sbjct: 543 PLLISTDAAARGIDINGVKCVINYDAPQYIRTYIHRVGRTARAGKAGLAFTFLLK----- 597
Query: 106 LYMFQVKRFKKLLQQADHDSCPVHSIPSSSIESLRPIYKSEYVE 149
Q KRF K++ A + +++S+ Y+ E
Sbjct: 598 ---VQEKRFLKMVSDAGSPGIQKQHVHPEALKSMESRYEQVLAE 638
>MGI|MGI:1916913 [details] [associations]
symbol:Ddx51 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 51"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1916913 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
KO:K14807 OMA:HIDQTPG GeneTree:ENSGT00550000075141 CTD:317781
HOGENOM:HOG000239572 HOVERGEN:HBG081427 OrthoDB:EOG4JM7PM
EMBL:AK152599 EMBL:BC060646 IPI:IPI00396728 RefSeq:NP_081432.2
UniGene:Mm.392735 UniGene:Mm.5267 ProteinModelPortal:Q6P9R1
SMR:Q6P9R1 PhosphoSite:Q6P9R1 PaxDb:Q6P9R1 PRIDE:Q6P9R1
Ensembl:ENSMUST00000031478 GeneID:69663 KEGG:mmu:69663
UCSC:uc008yre.2 InParanoid:Q6P9R1 ChiTaRS:DDX51 NextBio:330022
Bgee:Q6P9R1 CleanEx:MM_DDX51 Genevestigator:Q6P9R1
GermOnline:ENSMUSG00000029504 Uniprot:Q6P9R1
Length = 639
Score = 137 (53.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 17 IYLIPLLRNLGGEKFIVFASSVA--NSPKTLKAFRGKGHMQVLVCSDAMTSGMDVERAA- 73
+YL L + GG F+S K LK F +G +Q+L+ +DA G+DV+
Sbjct: 493 LYL--LAQAFGGVSVAEFSSRYGPGQRKKILKQFE-QGKIQLLISTDATARGIDVQGVEL 549
Query: 74 --------YIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLYMFQVKRFKKLLQQADHDS 125
Y++TY+HR G ARAG+ G FTLL K Q ++F +++ +A
Sbjct: 550 VINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLK--------VQERKFLQMVSEAGVPE 601
Query: 126 CPVHSIPSSSIESLRPIYKS--EYVESQANRKRKI 158
H IP ++ L Y++ +E ++K+
Sbjct: 602 LTHHEIPRKLLQPLVARYETALSQLEKTVKEEQKL 636
>FB|FBgn0004556 [details] [associations]
symbol:Dbp73D "Dead box protein 73D" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0005730 GO:GO:0022008 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 KO:K14807 GeneTree:ENSGT00550000075141 EMBL:M74824
EMBL:AF132173 EMBL:BT010045 PIR:S28762 RefSeq:NP_476833.1
UniGene:Dm.3199 ProteinModelPortal:P26802 SMR:P26802 PaxDb:P26802
PRIDE:P26802 EnsemblMetazoa:FBtr0075347 GeneID:39871
KEGG:dme:Dmel_CG9680 CTD:39871 FlyBase:FBgn0004556
InParanoid:P26802 OMA:CSKTELE OrthoDB:EOG4B8GVH PhylomeDB:P26802
GenomeRNAi:39871 NextBio:815810 Bgee:P26802 GermOnline:CG9680
Uniprot:P26802
Length = 687
Score = 117 (46.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 42/127 (33%), Positives = 60/127 (47%)
Query: 52 GHMQVLVCSDAMTSGMDV---------ERAAYIKTYIHRAGPRARAGQNGHCFTLLPKDE 102
G + L+CSDA+ G+DV E +I TYIHR G ARAG+ G T+L ++
Sbjct: 497 GKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLT-EQ 555
Query: 103 DKLLYMFQVKRFKKLLQQADHD-SCPVHSIPSSSIESLRPIYKSEYVESQAN-RKRKIGF 160
D L FKK+L A+ +H P I+ + EY E+ A R K+
Sbjct: 556 DMTL-------FKKILSDANKGLGEEIHVSPDIEIQ-----HAVEYKEALAGLRSEKVKN 603
Query: 161 KLSRMVK 167
K +M +
Sbjct: 604 KNQKMAE 610
Score = 48 (22.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 5 LSPQIC--ESKLKPIYLIPLLRNLGGEKFIVFASS 37
L+ Q C E +LKP+ + L+ ++F+ F +S
Sbjct: 419 LTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNS 453
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 121 (47.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 34/124 (27%), Positives = 64/124 (51%)
Query: 43 KTLKAFRGKGHMQVLVCSDAMTSGMDVERAAYI---------KTYIHRAGPRARAGQNGH 93
K L F+ G ++VLV +D G+D+++ + + Y+HR G RAG G
Sbjct: 284 KALADFKS-GEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQ 342
Query: 94 CFTLLPKDEDKLLYMFQVKRFKKLLQQADHDS-CPVHSIPSSSIESLRPIYKSEYVESQA 152
+L+ +E KLL + + ++L++ + + PVH++P ++ L P K V++ A
Sbjct: 343 AVSLVSSEEIKLLKDIE-RLINRVLERQEVEGFSPVHALPETT---LNPQGKDTKVKAVA 398
Query: 153 NRKR 156
N ++
Sbjct: 399 NHRK 402
>UNIPROTKB|E1BUI4 [details] [associations]
symbol:DDX51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 OMA:HIDQTPG GeneTree:ENSGT00550000075141
EMBL:AADN02043240 IPI:IPI00601309 Ensembl:ENSGALT00000010245
Uniprot:E1BUI4
Length = 676
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 19 LIPLLRNLGGEKFIVFASSVANSPK--TLKAFRGKGHMQVLVCSDAMTSGMDV------- 69
L L++ GG F+S + + + T+K F +G +Q+L+ +DA G+D+
Sbjct: 530 LFLLVQAFGGITVAEFSSRLPPNERQRTMKEFE-QGKIQLLISTDATARGIDIKGVNCVI 588
Query: 70 --ERAAYIKTYIHRAGPRARAGQNGHCFTLLPKDEDKLLYMFQVKRFKKLLQQADHDSCP 127
+ +I+TYIHR G ARAG+ G F+++ + Q +RF ++L+ A
Sbjct: 589 NYDTPQFIRTYIHRVGRTARAGKAGLAFSMVLR--------IQERRFLRMLKDAGIPDIK 640
Query: 128 VHSIPSSSIESLRPIYKSEYVESQANRKRKIGFKLSRMVK 167
H + + L+P+ + +Y E+ + +R + K+ R K
Sbjct: 641 QHLVKG---KLLKPLVQ-QYEEALSKLERTV--KVERAQK 674
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 111 (44.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 45 LKAFRGKGHMQVLVCSDAMTSGMDVERAAYI---------KTYIHRAGPRARAGQNGHCF 95
L FR G Q+LV +D G+DV + +++ + YIHR G RA ++G F
Sbjct: 282 LDGFRD-GTFQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAF 340
Query: 96 TLLPKDEDKLLYMFQ----VKRFKKLLQQADHDSCPVHSIPSSSIESLRPIYKSEYVESQ 151
TL+ D+ ++ + ++ +Q D+ S P P +E RP +
Sbjct: 341 TLVTSDDGAMVRAIERSLGAPIERRTVQGFDY-SVPA---PKKDVEFARPPREPRQARPH 396
Query: 152 ANRKRKIGFKLSRMVKG 168
AN+ +K G S G
Sbjct: 397 ANQPKKGGAAASPSASG 413
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 11 ESKLKPIYLIPLLRNLGGEKFIVF 34
E LK L+ LLR+ E ++F
Sbjct: 222 EQHLKTPLLLELLRHTDTESVLIF 245
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 83 (34.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 45 LKAFRGKGHMQVLVCSDAMTSGMDVERAAYI---------KTYIHRAGPRARAGQNGHCF 95
L F+ K +L+ +D + G+D+ + K YIHR G ARAG++G
Sbjct: 343 LNKFKAKNR-SILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAI 401
Query: 96 TLLPKDEDKLLYMFQVKRFKKL-LQQADHD 124
TL+ + + +L + K+L L + + D
Sbjct: 402 TLVSQYDIELYQRIEHLLGKQLTLYKCEED 431
Score = 77 (32.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 13 KLKPIYLIPLLRNLGGEKFIVFASSVANSPKTLKAFRGKG 52
K K +YL+ +L L G F++F S+ N+ KT R G
Sbjct: 285 KYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 324
>POMBASE|SPCC285.03 [details] [associations]
symbol:SPCC285.03 "ATP-dependent RNA helicase Dbp6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC285.03 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14807 EMBL:D89259 PIR:T41249 PIR:T43184
RefSeq:NP_588332.1 ProteinModelPortal:Q76PD3
EnsemblFungi:SPCC285.03.1 GeneID:2538809 KEGG:spo:SPCC285.03
HOGENOM:HOG000203294 OMA:HIDQTPG OrthoDB:EOG490BK3 NextBio:20799991
Uniprot:Q76PD3
Length = 604
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 33 VFASSVANSP--KTLKAFRGKGHMQVLVCSDAMTSGMDVERAA----Y-----IKTYIHR 81
+F SS++ K + F G + +LVCSD M G+DV Y +++Y+HR
Sbjct: 466 LFTSSLSRDERKKIISRF-ATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHR 524
Query: 82 AGPRARAGQNGHCFTLLPKDE----DKLLYMFQVKR---FKKLLQQADHDSCPVHSIPSS 134
G ARAG+ G +TL+ E KL+ Q++R K++ + H S
Sbjct: 525 IGRTARAGREGFAWTLVQSHEGHHFSKLVK--QLRRTLPIKRIKIEFSHISEEFVVAYDK 582
Query: 135 SIESLR-PIYKSEYVESQA 152
++E+LR ++ S Y + ++
Sbjct: 583 ALEALRVEVFNSRYPQQKS 601
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 43 KTLKAFRGKGHMQVLVCSDAMTSGMDVERAAYI---------KTYIHRAGPRARAGQNGH 93
K L F+ G +++LV +D G+D+++ ++ + Y+HR G RAG++G
Sbjct: 290 KALADFKA-GEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGE 348
Query: 94 CFTLLPKDEDKLLYMFQVKRFKKLLQQADHDSCPVHSIPSSSIESLRP 141
+L+ DE+KLL ++R K + AD D + +S++E+ +P
Sbjct: 349 AISLVAPDEEKLLK--SIERMTKQ-KIADGD---LMGFDASAVEAEKP 390
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 90 (36.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 32/125 (25%), Positives = 53/125 (42%)
Query: 45 LKAFRGKGHMQVLVCSDAMTSGMDVERAAYI---------KTYIHRAGPRARAGQNGHCF 95
L FR + +LV +D G+D+ + KTYIHR G ARAG++G
Sbjct: 328 LGKFRSRSR-DILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAI 386
Query: 96 TLLPKDEDKLLYMFQVKRFKKLLQ-QADHDSCPVHSIPSSSIESLRPIYKSEYVESQANR 154
+ + + + ++ + KKL + Q + D V S + I + E + R
Sbjct: 387 SFVTQYDVEVWLRIEHALSKKLPEYQVEKDEVMVMSERVAEASRQATIEMKSFDEKKGAR 446
Query: 155 KRKIG 159
+K G
Sbjct: 447 GKKFG 451
Score = 59 (25.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 6 SPQIC-ESKLKPIYLIPLLRNLGGEKFIVFASSVANSPKTLKAFRGKG 52
S IC K K +YL+ LL G+ I+F ++V + + R G
Sbjct: 262 SSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALG 309
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 106 (42.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 45 LKAFRGKGHMQVLVCSDAMTSGMDVERAAYI---------KTYIHRAGPRARAGQNGHCF 95
L AFR K +QV++C+D + G+D+ + KTYIHR G ARAG+ G
Sbjct: 380 LSAFRSKT-LQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSAL 438
Query: 96 TLLPKDEDKLLYMF-QV--KRFKKLLQQADHDSCPVHSIPSSSIESLRPIYKSEYVES-Q 151
+ + + + +LL QV K+ +L H + V + + E+ + ++ E +
Sbjct: 439 SFVTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQVLVAKKEAELKLENQKFGEKKE 498
Query: 152 ANRKRKI 158
NR++++
Sbjct: 499 INRRKEL 505
Score = 36 (17.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 9 ICESKLKPIYLIPLLRNLGGEK----FIVFASSVANSPKTLKAFRGKG 52
+C +K YL+ +++N + ++FA + F G G
Sbjct: 314 VCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLG 361
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.36 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 568 (60 KB)
Total size of DFA: 138 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.76u 0.11s 14.87t Elapsed: 00:00:01
Total cpu time: 14.76u 0.11s 14.87t Elapsed: 00:00:01
Start: Sat May 11 05:34:44 2013 End: Sat May 11 05:34:45 2013