BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048511
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4I1S7|ELP2_ARATH Elongator complex protein 2 OS=Arabidopsis thaliana GN=ELP2 PE=1
SV=1
Length = 838
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/357 (71%), Positives = 293/357 (82%), Gaps = 11/357 (3%)
Query: 1 MGGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAI-SILLVSSSQDK 59
+GGLDNKI LY G+RTGKF CELKGHTDWIRSLDFSLP+ T+ E SI+LVSSSQDK
Sbjct: 193 LGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDK 252
Query: 60 VIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYS 119
VIRIWKL L G ++R+E I+LASYIEGPV V+G+ +YQ+SVES+LIGHEDWVYS
Sbjct: 253 VIRIWKLVLVGDVG----SWRRE-ITLASYIEGPVFVSGTFTYQISVESVLIGHEDWVYS 307
Query: 120 VQWEPPSTAPSDG-VSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGF 178
V+W+PP DG + QP SILSASMDKTMMIW+PEK TG+W+NVV VGELSH ALGF
Sbjct: 308 VEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGF 367
Query: 179 YGGHWSPDGRSILAHGYGGAFHLWRNVGV--DIDNWQPQKVPSGHFAAVMDISWSRSSDY 236
YGGHWSP+ SILAHGYGGAFHLWRNV + +NWQ QKVPSGHFAAV D++W+R+ +Y
Sbjct: 368 YGGHWSPNSLSILAHGYGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEY 427
Query: 237 LLSVSHDQTTRVFAPWKNVASLMGENS-WHEVARPQVHGHDINCVTIIQGKGNHRFVSGA 295
LLSVS DQTTRVF+ WKN E+ WHE+ARPQVHGHDINCV ++QGKGNHRFVSGA
Sbjct: 428 LLSVSQDQTTRVFSAWKNDEGNEAEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGA 487
Query: 296 DEKVARVFEAPLSFLKTLNHATF-QESSFHEDLQADVQILGANMSALGLSQKPIYVN 351
+EKV RVFEAPLSFLKTLNH E SF EDLQADVQ+LGANMSALGLSQKPIY++
Sbjct: 488 EEKVVRVFEAPLSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKPIYLH 544
>sp|Q05AM5|ELP2_DANRE Elongator complex protein 2 OS=Danio rerio GN=elp2 PE=2 SV=1
Length = 821
Score = 260 bits (665), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 213/350 (60%), Gaps = 26/350 (7%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
GG D+++HLY Q +G+F R L GH DW+R ++++ GE + L S SQD +I
Sbjct: 174 GGDDSRVHLYV-QLSGQFQRVLTLTGHEDWVRGVEWAN---KDGE---LWLASCSQDCLI 226
Query: 62 RIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYSVQ 121
R+W+L A T + + + E V+G + V++E++L GHE+WVY +
Sbjct: 227 RVWRLF-----AKTAAEPDLQTDGIIKMKENIFQVSGEE-FAVTLETVLAGHENWVYGIH 280
Query: 122 WEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG 181
W+PPS G S +Q +LSASMDKTM++W PE+ +G+W+ +V VGE+ + LGFYG
Sbjct: 281 WQPPSVK---GDSVEQSLKLLSASMDKTMILWGPEEDSGMWVEMVRVGEVGGNTLGFYGC 337
Query: 182 HWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVS 241
SPDG ILAH + GA HLW + W+P V SGHF AV D+SW +++++V
Sbjct: 338 QMSPDGSMILAHAFHGALHLWHHDSN--QEWRPSVVISGHFNAVQDMSWDPEGEFIITVG 395
Query: 242 HDQTTRVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVAR 301
DQTTR+F PW S + +WHE++RPQ+HG+D+ C+T++ G +FVSGADEKV R
Sbjct: 396 SDQTTRLFTPWTRKGS--SQITWHEISRPQIHGYDMQCLTMV---GRFQFVSGADEKVLR 450
Query: 302 VFEAPLSFLKTLNH--ATFQESSFHEDLQADVQILGANMSALGLSQKPIY 349
VF+AP +F++ H T E + AD+ GA+ ALGLS K ++
Sbjct: 451 VFKAPRNFVENFAHISGTSLEKLLGCNDIADLP-EGASTPALGLSNKAVF 499
>sp|Q6IA86|ELP2_HUMAN Elongator complex protein 2 OS=Homo sapiens GN=ELP2 PE=1 SV=2
Length = 826
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 207/356 (58%), Gaps = 34/356 (9%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
G D +IH++ Q+ +F + L GH DWIR ++++ + L S SQD +I
Sbjct: 181 GNDDCRIHIF-AQQNDQFQKVLSLCGHEDWIRGVEWA------AFGRDLFLASCSQDCLI 233
Query: 62 RIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYSVQ 121
RIWKL ++ +S TQ + IE + ++ V++E++L GHE+WV +V
Sbjct: 234 RIWKLYIKSTSLETQDDDNIRLKENTFTIENESV---KIAFAVTLETVLAGHENWVNAVH 290
Query: 122 WEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG 181
W+P DGV QQP +LSASMDKTM++W P++ +G+W+ V VGE+ + LGFY
Sbjct: 291 WQP--VFYKDGV-LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDC 347
Query: 182 HWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVS 241
++ DG I+AH + GA HLW+ V+ W P+ V SGHF V D+ W +++++V
Sbjct: 348 QFNEDGSMIIAHAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVG 407
Query: 242 HDQTTRVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVAR 301
DQTTR+FAPWK + +WHE+ARPQ+HG+D+ C+ +I +FVSGADEKV R
Sbjct: 408 TDQTTRLFAPWKR--KDQSQVTWHEIARPQIHGYDLKCLAMI---NRFQFVSGADEKVLR 462
Query: 302 VFEAPLSFL--------KTLNHATFQESSFHEDLQADVQILGANMSALGLSQKPIY 349
VF AP +F+ ++LNH + S DL GA + ALGLS K ++
Sbjct: 463 VFSAPRNFVENFCAITGQSLNHVLCNQDS---DLPE-----GATVPALGLSNKAVF 510
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
GG DN++ ++ + ++A L+GH + ++ TS A+ L+VS++ D +
Sbjct: 81 GGSDNQV-IHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAV 139
Query: 62 RIWKLALRGSSANTQSTYR-------KEVISLASYIEGPVLVAGSSSYQVSVESL----- 109
R+W + +G T +S + P+L G+ ++ + +
Sbjct: 140 RLW--SKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILACGNDDCRIHIFAQQNDQF 197
Query: 110 -----LIGHEDWVYSVQW 122
L GHEDW+ V+W
Sbjct: 198 QKVLSLCGHEDWIRGVEW 215
>sp|Q5EBD9|ELP2_XENTR Elongator complex protein 2 OS=Xenopus tropicalis GN=elp2 PE=2 SV=1
Length = 824
Score = 251 bits (641), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 210/351 (59%), Gaps = 22/351 (6%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
G D++IHLY Q +F + L GH DWIR +++++ +G+ ++ L S +QD +I
Sbjct: 176 GADDSRIHLYVLQNE-QFEKTQVLHGHEDWIRGVEWAV----TGQ--NLFLASCAQDCLI 228
Query: 62 RIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYSVQ 121
RIWK+ R ++ T + I L I +SY V++E++L GHE+ +Y+V
Sbjct: 229 RIWKI-FRKTAKENSKTEDENSIKLKENIFKVKEKDTETSYAVTLETVLTGHENSIYAVH 287
Query: 122 WEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG 181
W+P + DG S QP S+LSASMDKTM++W+P++ +G+W+ V VGE+ + LGF G
Sbjct: 288 WQP--SFSRDG-SIVQPMSLLSASMDKTMILWEPDEESGVWLEQVRVGEVGGNTLGFLGC 344
Query: 182 HWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVS 241
+SPD ILAH + GA HLW + W P + SGHF +V D+ W ++++VS
Sbjct: 345 QFSPDKSMILAHAFHGALHLWSRAPNKQNEWIPMVIISGHFDSVQDMRWDPDGQFVITVS 404
Query: 242 HDQTTRVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVAR 301
DQTTR+F PWK +WHE+ARPQ+HG+D+ C+ +I G +FVSGADEKV R
Sbjct: 405 ADQTTRLFGPWKKKG--QSHVTWHEIARPQIHGYDMQCLAMI---GRFQFVSGADEKVLR 459
Query: 302 VFEAPLSFLKTLNH---ATFQESSFHEDLQADVQILGANMSALGLSQKPIY 349
VF AP +F++ ++ + ++ +ED GA + ALGLS K ++
Sbjct: 460 VFAAPRNFIENFSNISCISVEKLLLNEDTNLPE---GATVPALGLSNKAVF 507
>sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=Mus musculus GN=Elp2 PE=1 SV=1
Length = 831
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 212/351 (60%), Gaps = 23/351 (6%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
G D +IHLY Q+ +F +A L GH DWIR ++++ T G + L S SQD +I
Sbjct: 181 GDDDCRIHLYI-QQDDQFQKALSLCGHEDWIRGVEWA----TFGR--DLFLASCSQDCLI 233
Query: 62 RIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYSVQ 121
RIW+L ++ +S T+ + + + +G V ++ V++E++L GHE+WV +V
Sbjct: 234 RIWRLYMKPASFETKDGSLRLKENTFTIKDGGV----RTTVAVTLETVLAGHENWVNAVH 289
Query: 122 WEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG 181
W+P + DGV QQP +LSASMDKTM++W P++ +G+W+ V VGE+ + LGFY
Sbjct: 290 WQP--SFYKDGV-LQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDC 346
Query: 182 HWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVS 241
+ +G I+AH + GA HLW+ V+ W P+ V SGHF V D+ W +++++ S
Sbjct: 347 QFGENGTMIIAHAFHGALHLWKQSTVNPRQWAPEIVISGHFDGVQDLMWDPEGEFIITTS 406
Query: 242 HDQTTRVFAPWKNVASL-MGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVA 300
DQTTR+FAPWK + +WHE+ARPQ+HG++I C+ +I +FVSGADEKV
Sbjct: 407 TDQTTRLFAPWKKKDQKDRSQVTWHEIARPQIHGYNIKCLAMID---RFQFVSGADEKVL 463
Query: 301 RVFEAPLSFLKTLNHATFQESSFHEDLQADVQIL--GANMSALGLSQKPIY 349
RVF AP +F++ + + Q S + D Q L GA + ALGLS K ++
Sbjct: 464 RVFSAPRNFVENFSVISRQSLSH---MLCDDQDLPEGATVPALGLSNKALF 511
>sp|Q496Z0|ELP2_RAT Elongator complex protein 2 OS=Rattus norvegicus GN=Elp2 PE=2 SV=1
Length = 821
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 206/343 (60%), Gaps = 19/343 (5%)
Query: 7 KIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKL 66
+IHL+ Q+ F + L GH DWIR ++++ T G + L S SQD +IRIW+L
Sbjct: 186 RIHLFV-QQDDWFQKMLSLCGHEDWIRGVEWA----TFGR--DLFLASCSQDCLIRIWRL 238
Query: 67 ALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYSVQWEPPS 126
++ +S T+ + + + +G V S++ V +E++L GHE+WV ++ W+P
Sbjct: 239 YMKPTSLETEDGSIRLKENTFTIKDGGV----STTVAVILETVLAGHENWVNAIHWQP-- 292
Query: 127 TAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPD 186
+ DGV QP +LSASMDKTM++W P++ +G+W+ V VGE+ + LGFYG + +
Sbjct: 293 SFYKDGV-LHQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYGCQFGEN 351
Query: 187 GRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTT 246
G I+AH + GA HLW+ V+ W P+ V SGHF V D+ W +++++ S DQTT
Sbjct: 352 GSMIIAHAFHGAMHLWKQSTVNPRQWAPEIVISGHFDGVQDLIWDPEGEFIITTSTDQTT 411
Query: 247 RVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAP 306
R+FAPWK + +WHE+ARPQ+HG+++ C+ +I +FVSGADEKV RVF AP
Sbjct: 412 RLFAPWKK--KNQSQVTWHEIARPQIHGYNLKCLAMID---RFQFVSGADEKVLRVFSAP 466
Query: 307 LSFLKTLNHATFQESSFHEDLQADVQILGANMSALGLSQKPIY 349
+F++ + + Q S + + GA + ALGLS K ++
Sbjct: 467 RNFVENFSVISRQSLSHMLYDEDNDLPEGATVPALGLSNKAVF 509
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 44/248 (17%)
Query: 103 QVSVESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIW 162
QV L GHE VY+V + PSDG +Q + I SA+ D T+ +W + +
Sbjct: 96 QVLKSVRLQGHEGPVYAVH-GIYQSGPSDG---EQHALIASAASDSTVRLWSKKGSEVKC 151
Query: 163 MNVVTVGE-----LSHSALGFYGGHWSPDGRS-ILAHG-YGGAFHLWRNVGVDIDNW-QP 214
+ ++ G+ + S L PD + +LA G GG HL+ V D+W Q
Sbjct: 152 LQILKFGDGFVLTVCLSTL--------PDTDAPVLACGDDGGRIHLF----VQQDDWFQK 199
Query: 215 QKVPSGHFAAVMDISWSRSSD--YLLSVSHDQTTRVFAPWKNVASLMGENSWHEVARPQV 272
GH + + W+ +L S S D R++ + SL E+ +
Sbjct: 200 MLSLCGHEDWIRGVEWATFGRDLFLASCSQDCLIRIWRLYMKPTSLETEDGSIRLKE--- 256
Query: 273 HGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFLKTLNHATFQESSFHED--LQAD 330
N TI G G VA + E L+ + +A + SF++D L
Sbjct: 257 -----NTFTIKDG--------GVSTTVAVILETVLAGHENWVNAIHWQPSFYKDGVLHQP 303
Query: 331 VQILGANM 338
V++L A+M
Sbjct: 304 VRLLSASM 311
>sp|Q86H45|ELP2_DICDI Probable elongator complex protein 2 OS=Dictyostelium discoideum
GN=elp2 PE=3 SV=1
Length = 901
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 1 MGGLDNKIHLY-----RGQRTGKFVRACELKGHTDWIRSLDFSL--PVCTSGEAISILLV 53
+GGL+ KIH+Y T +F + L+GH DWIRSL F GE ++L
Sbjct: 194 VGGLEPKIHIYIQNLDSTTATLQFKKLMSLQGHQDWIRSLSFKTINEGEGEGEEEELILA 253
Query: 54 SSSQDKVIRIWKLALRGSSANTQ-----------------STYRKEVISLASYIEGPVLV 96
SSSQD IR+WK++ + Q ST V SL++ +G +
Sbjct: 254 SSSQDFKIRLWKISKFTAEKQKQQQLDESGNGGANLLGSLSTQLSGVTSLST--KGYLFN 311
Query: 97 AGSSSYQVSVESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPE 156
S Y + ++++L GH+DWVYS+ W P G Q+ ++SASMDKT ++W+P+
Sbjct: 312 CNSVKYIILLDAVLSGHDDWVYSIHWSPARRDQETGKKIQE-QMLISASMDKTAIVWRPD 370
Query: 157 KTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWR-NVGVDIDNWQPQ 215
+TTGIW++ VG++ + LG YG +SP + IL+HGY GAFH W+ N W+PQ
Sbjct: 371 RTTGIWIDESRVGDMGGNILGQYGAVFSPCSQYILSHGYNGAFHFWKQNTNQKSSFWEPQ 430
Query: 216 KVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPWKNVASLMGEN--------SWHEV 267
V SGHF V D+ WS Y +S S D+T R+F+ WK + SW+E+
Sbjct: 431 IVVSGHFGPVQDLMWSPDYSYFISCSTDRTLRLFSEWKRNNNNNNLENNKEQQIISWNEI 490
Query: 268 ARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFLKTLNHATFQESSFHEDL 327
ARPQ+HG+D+ C T I K H VSGA+EK+ R F +F+ TL S
Sbjct: 491 ARPQIHGYDLECFTFIN-KKTHVIVSGAEEKIMRAFVGSQNFVDTL----LNISKVQPVN 545
Query: 328 QADVQILGANMSALGLSQKPIYV 350
+ L AN +LGLS KP +
Sbjct: 546 DGTQRPLAANQPSLGLSNKPYFT 568
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 208 DIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPWKNVASLMGENSWHEV 267
++ NW+ GH V+++S+S +S YLL VS D R++ W+ AS E +
Sbjct: 688 NVSNWKECANLKGHTLTVVNLSFSHNSKYLLGVSRD---RMWTLWERSASNSEEPFVKVI 744
Query: 268 ARPQVHGHDINCVTIIQGKGNHR---FVSGADEKVARVFEAPLSFLKTLNHA 316
+ P+ HG I G +H F +GA +K+ +V+ L +K + +A
Sbjct: 745 SAPKSHGR-----IIWSGSWSHDDKFFATGARDKLVKVWN--LDNIKDIKNA 789
>sp|Q7K4B3|ELP2_DROME Probable elongator complex protein 2 OS=Drosophila melanogaster
GN=Elp2 PE=1 SV=1
Length = 794
Score = 229 bits (583), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 191/338 (56%), Gaps = 30/338 (8%)
Query: 18 KFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQS 77
+F R +L GH DW+R LDF GE +LL S SQD IR+W++A R S
Sbjct: 194 QFQRKHKLTGHEDWVRGLDF----VVDGE--DLLLASGSQDNFIRLWRIAPR--SKEQMQ 245
Query: 78 TYRKEVISLAS-----YIEGPVLVAGSSS-YQVSVESLLIGHEDWVYSVQWEPPSTAPSD 131
R ++ L+ +E +L G + Y VS+ES+L GHE W+Y V W
Sbjct: 246 ENRVDLHQLSHNDDEIKVEEKILQLGKEAWYAVSLESVLYGHEGWIYGVHWHK------- 298
Query: 132 GVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSIL 191
+ Q +LSAS+DKT++IW P + GIW+ V VGE+ +++GFYGG +S DG SI+
Sbjct: 299 --TPDQELRLLSASIDKTVIIWAPTEE-GIWLEEVRVGEVGGNSVGFYGGKFSGDGHSIM 355
Query: 192 AHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAP 251
AH Y G FH+W W P + GH+ V D++W S YL++ S DQTTR+ AP
Sbjct: 356 AHSYQGGFHIWSQDPDRPQLWTPGVIVGGHYGEVRDLAWEHSGAYLMTASADQTTRLHAP 415
Query: 252 WKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFLK 311
W + +WHE+ARPQ+HG+D+ + ++ ++F SGA+EK+ R F+AP +F++
Sbjct: 416 WLQDGA---NPTWHELARPQIHGYDMQALALL---SRYKFASGAEEKIVRTFQAPANFIE 469
Query: 312 TLNHATFQESSFHEDLQADVQILGANMSALGLSQKPIY 349
H + E+ D+ D GA++ +LGLS K +Y
Sbjct: 470 NFRHISGIENDDAGDVLLDSLPKGASVPSLGLSNKAVY 507
>sp|O94533|ELP2_SCHPO Elongator complex protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=elp2 PE=3 SV=1
Length = 760
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 177/333 (53%), Gaps = 50/333 (15%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQST-YRKEV 83
L+GH DW+R+L F TSG + L S SQD+ IR+W ++L GS S + + V
Sbjct: 187 LRGHLDWVRTLSFKK---TSGSTAT--LASGSQDRYIRLWNISLWGSEDEKVSEEFFESV 241
Query: 84 ISLASYIEGPV-LVAGSSSYQVSVESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSIL 142
+S PV G ++ ++LL+GHEDWV SV W P IL
Sbjct: 242 LS-----NKPVRFTLGKIDLKIVFDALLMGHEDWVMSVDWHPTKEM------------IL 284
Query: 143 SASMDKTMMIWQPEKTTGIWMNVVTVGEL--SH-------SALGFYGGHWSPDGRSILAH 193
S+S D +M++W+P+ TGIW+ +GE+ SH SA GF+GG W+P+G ++
Sbjct: 285 SSSADSSMIVWEPDTNTGIWVVTGRMGEMASSHGSTTATGSAGGFWGGLWNPNGNCVVCW 344
Query: 194 GYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPWK 253
G G + LW+ D W SGH +V ++W + LS DQTTR+FA +K
Sbjct: 345 GRTGGWRLWKQ---DAGQWLQLPSISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLFARFK 401
Query: 254 NVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFLKTL 313
+N+WHE+ARPQ+HG+D+ ++ + + F+S ADEKV+RVF+ P + ++ L
Sbjct: 402 K------DNAWHEMARPQIHGYDLTSISCMPSRIG--FLSCADEKVSRVFKFPKTIVRLL 453
Query: 314 NHATFQESSFHEDLQADVQILGANMSALGLSQK 346
+++ E+ D AN+ LGLS K
Sbjct: 454 YR--LCDTNIGEESLPD----AANVPLLGLSNK 480
>sp|P42935|ELP2_YEAST Elongator complex protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ELP2 PE=1 SV=1
Length = 788
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 54/342 (15%)
Query: 24 ELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEV 83
EL+GH DW++SL F T G+ LL S SQD+ IR+W++ + +++ +K
Sbjct: 197 ELEGHEDWVKSLAFRHQE-TPGD---YLLCSGSQDRYIRLWRIRINDLIDDSEEDSKK-- 250
Query: 84 ISLASYIEGPVLVAGSSSYQVSVESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILS 143
++L S + + ++ E+L++GH+DW+ S+QW + +L+
Sbjct: 251 LTLLSNKQYKFQIDDELRVGINFEALIMGHDDWISSLQWH------------ESRLQLLA 298
Query: 144 ASMDKTMMIWQPEKTTGIWMNVVTVGELSH----SALGFYGGHWS------PDGRSILAH 193
A+ D ++M+W+P++T+GIW+ + +GE+S +A G GG WS L +
Sbjct: 299 ATADTSLMVWEPDETSGIWVCSLRLGEMSSKGASTATGSSGGFWSCLWFTHERMDFFLTN 358
Query: 194 GYGGAFHLW---RNVGVDIDNWQPQKVP-SGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
G G++ +W N+ D Q++ SG V DI+WS S +YLL+ S DQTTR+F
Sbjct: 359 GKTGSWRMWATKDNIICD------QRLGISGATKDVTDIAWSPSGEYLLATSLDQTTRLF 412
Query: 250 APWKNVASLMGEN--SWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAP- 306
APW AS +WHE +RPQ+HG+D+ CV + + RFVSG DEK+ R F+ P
Sbjct: 413 APWIYDASGRKREIATWHEFSRPQIHGYDMICVETVT---DTRFVSGGDEKILRSFDLPK 469
Query: 307 --LSFLKTLNHATFQESSFHEDLQADVQILGANMSALGLSQK 346
L+ F+E S D A + LGLS K
Sbjct: 470 GVAGMLQKFVGIQFEEKSEMPD--------SATVPVLGLSNK 503
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 42/232 (18%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L+GHTDW+R++ FS LL S S D +R+W +A A + + V+
Sbjct: 497 LEGHTDWVRAVAFS--------PDGALLASGSDDATVRLWDVAAAEERAVFEG-HTHYVL 547
Query: 85 SLASYIEGPVLVAGSSSYQVSV--------ESLLIGHEDWVYSVQWEPPSTAPSDGVSCQ 136
+A +G ++ +GS + ++L GH D+VY+V + P DG
Sbjct: 548 DIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSP------DG---- 597
Query: 137 QPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYG 196
S + S S D T+ +W + TG +V+ + +L F SPDG S+L HG
Sbjct: 598 --SMVASGSRDGTIRLW--DVATGKERDVLQAPAENVVSLAF-----SPDG-SMLVHGSD 647
Query: 197 GAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRV 248
HLW D+ + + GH V +++S L S S D+T R+
Sbjct: 648 STVHLW-----DVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRL 694
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 3 GLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIR 62
G D+ +HL+ +G+ + E GHTDW+R++ FS LL S S D+ IR
Sbjct: 645 GSDSTVHLW-DVASGEALHTFE--GHTDWVRAVAFS--------PDGALLASGSDDRTIR 693
Query: 63 IWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSV 106
+W +A + T + + V S+A + EG L + S + +
Sbjct: 694 LWDVAAQ-EEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRI 736
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 63/282 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISI-------------------- 50
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 137 TGDFERT--LKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVS 194
Query: 51 ---------LLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
L+S+S+DK I++W+LA G T + +R+ V ++ +G +L + S+
Sbjct: 195 SVHFMPNGDFLISASRDKTIKMWELAT-GYCVKTFTGHREWVRTVRVNQDGSLLASCSND 253
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPSTA--PSDGVSCQQPSS----ILSASMD 147
V V ++ L HE V + W P S S+ + ++ +LS S D
Sbjct: 254 QTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRD 313
Query: 148 KTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGV 207
KT+ +W + +TG+ + + VG + G W P G+ I++ +W
Sbjct: 314 KTIKMW--DISTGVCI-MTLVGHDN----WVRGVVWHPGGKYIISASDDKTIRVW----- 361
Query: 208 DIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + QK H I + RS+ Y+++ S DQT +V+
Sbjct: 362 DYKNKRCQKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVW 403
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 181 GHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQP---QKVPSGHFAAVMDISWSRSSDYL 237
GH SP R + Y + + I +++ ++ GH AV D+S+ + L
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLL 163
Query: 238 LSVSHDQTTRV--FAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGA 295
S S D T ++ F ++N+ ++ HGHD N ++ +S +
Sbjct: 164 ASCSADMTIKLWDFQTFENIKTM--------------HGHDHNVSSVHFMPNGDFLISAS 209
Query: 296 DEKVARVFEAPLSFL 310
+K +++E +
Sbjct: 210 RDKTIKMWELATGYC 224
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 44/256 (17%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
G D + L+ Q TGK++ + L+GHTD+I + FS S L S+S D +
Sbjct: 954 GSNDKTVKLWDWQ-TGKYISS--LEGHTDFIYGIAFSPD--------SQTLASASTDSSV 1002
Query: 62 RIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESLLIG--------H 113
R+W ++ G + V ++ + +G ++ GS+ V + ++ G H
Sbjct: 1003 RLWNIS-TGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEH 1061
Query: 114 EDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSH 173
D + + W P DG + SAS D+++ +W + TG VG L
Sbjct: 1062 SDKILGMAWSP------DG------QLLASASADQSVRLW--DCCTG-----RCVGILRG 1102
Query: 174 SALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRS 233
+ Y +SP+G I +W D + K +GH V DI++S
Sbjct: 1103 HSNRVYSAIFSPNGEIIATCSTDQTVKIW-----DWQQGKCLKTLTGHTNWVFDIAFSPD 1157
Query: 234 SDYLLSVSHDQTTRVF 249
L S SHDQT R++
Sbjct: 1158 GKILASASHDQTVRIW 1173
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 45/247 (18%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L GHTDW+R + FS T L SS+ D I++W ++ +G T ++ V
Sbjct: 764 LTGHTDWVRCVAFSPDGNT--------LASSAADHTIKLWDVS-QGKCLRTLKSHTGWVR 814
Query: 85 SLASYIEGPVLVAGSSSYQVSV------ESL--LIGHEDWVYSVQWEPPSTAPSDGVSCQ 136
S+A +G L +GS + + E L IGH + VYS+ + P S
Sbjct: 815 SVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKI-------- 866
Query: 137 QPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYG 196
++S S D+T+ +W + I E+ A +SPDG+++
Sbjct: 867 ----LVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVA-------FSPDGQTLACVSLD 915
Query: 197 GAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPW---K 253
+ LW + Q K G+ + +++S L S S+D+T +++ W K
Sbjct: 916 QSVRLW-----NCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLW-DWQTGK 969
Query: 254 NVASLMG 260
++SL G
Sbjct: 970 YISSLEG 976
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 15 RTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSAN 74
++GK + C +GH++W+R + FS GE +L S D+ +++W + G
Sbjct: 672 KSGKLLLIC--RGHSNWVRFVVFS----PDGE----ILASCGADENVKLWSVR-DGVCIK 720
Query: 75 TQSTYRKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPS 126
T + + EV S+A + +G L + S + + + L GH DWV V + P
Sbjct: 721 TLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSP-- 778
Query: 127 TAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPD 186
DG +++ S++ D T+ +W + + G + A +S D
Sbjct: 779 ----DG------NTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVA-------FSAD 821
Query: 187 GRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTT 246
G+++ + +W + + K GH +V I++S S L+S S D+T
Sbjct: 822 GQTLASGSGDRTIKIW-----NYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTI 876
Query: 247 RVF 249
+++
Sbjct: 877 KLW 879
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 2 GGLDNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVI 61
G D + L+ Q GK ++ L GH DW+ SL FS T L S+S DK I
Sbjct: 1215 GSEDKTVKLWHRQ-DGKLLKT--LNGHQDWVNSLSFSPDGKT--------LASASADKTI 1263
Query: 62 RIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGS--------SSYQVSVESLLIGH 113
++W++A G T + V + +G + + S + + + +E+ GH
Sbjct: 1264 KLWRIA-DGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELET-FTGH 1321
Query: 114 EDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSH 173
VY+V + P S I SAS+D T+ +WQ +++ E+
Sbjct: 1322 SGGVYAVNFLPDSNI------------IASASLDNTIRLWQRP--------LISPLEVLA 1361
Query: 174 SALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRS 233
G Y + DG I G G LW + D + +P A+ IS++
Sbjct: 1362 GNSGVYAVSFLHDGSIIATAGADGNIQLWHSQ----DGSLLKTLPGNK--AIYGISFTPQ 1415
Query: 234 SDYLLSVSHDQTTRV 248
D + S + D+T ++
Sbjct: 1416 GDLIASANADKTVKI 1430
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 74 NTQSTYRKEVISLASYIEGPVLVAGSSSYQVSVES-------LLIGHEDWVYSVQWEPPS 126
N ++ VIS++ +G + +GS + + S L GHED VYSV + P
Sbjct: 1066 NRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSP-- 1123
Query: 127 TAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPD 186
DG +I S DKT+ +WQ + G + +T E + + + F SPD
Sbjct: 1124 ----DG------QTIASGGSDKTIKLWQ--TSDGTLLKTITGHEQTVNNVYF-----SPD 1166
Query: 187 GRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTT 246
G+++ + + LW D + Q +GH A V+ + +S + + S D+T
Sbjct: 1167 GKNLASASSDHSIKLW-----DTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTV 1221
Query: 247 RVF--APWKNVASLMGENSW 264
+++ K + +L G W
Sbjct: 1222 KLWHRQDGKLLKTLNGHQDW 1241
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 40/207 (19%)
Query: 5 DNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIW 64
DN + L+ GKF + LKGHTD + + FS G+ I+ S+S DK IR+W
Sbjct: 1467 DNTVKLWN-VSDGKFKKT--LKGHTDEVFWVSFS----PDGKIIA----SASADKTIRLW 1515
Query: 65 KLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSV----ESLLI----GHEDW 116
+ G+ + + V S+ +G +L + S+ V + + L+ GH +
Sbjct: 1516 D-SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNV 1574
Query: 117 VYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSAL 176
VYS + P DG I SAS DKT+ IWQ I +++T L
Sbjct: 1575 VYSSSFSP------DG------RYIASASEDKTVKIWQ------IDGHLLTT--LPQHQA 1614
Query: 177 GFYGGHWSPDGRSILAHGYGGAFHLWR 203
G +SPDG+++++ +WR
Sbjct: 1615 GVMSAIFSPDGKTLISGSLDTTTKIWR 1641
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 33/206 (16%)
Query: 51 LLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSV---- 106
L+ S++ DK ++IW++ G + T + EV + +G L + S V +
Sbjct: 1418 LIASANADKTVKIWRVR-DGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVS 1476
Query: 107 ----ESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIW 162
+ L GH D V+ V + P DG I SAS DKT+ +W + +G
Sbjct: 1477 DGKFKKTLKGHTDEVFWVSFSP------DG------KIIASASADKTIRLW--DSFSGNL 1522
Query: 163 MNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHF 222
+ + +H+ L Y +++PDG + + LWR+ + SGH
Sbjct: 1523 IKSLP----AHNDL-VYSVNFNPDGSMLASTSADKTVKLWRS-----HDGHLLHTFSGHS 1572
Query: 223 AAVMDISWSRSSDYLLSVSHDQTTRV 248
V S+S Y+ S S D+T ++
Sbjct: 1573 NVVYSSSFSPDGRYIASASEDKTVKI 1598
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 5 DNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIW 64
D I L+R GK V+ LKGH D + ++FS + G+AI+ S+S+D I++W
Sbjct: 1260 DKTIKLWR-IADGKLVKT--LKGHNDSVWDVNFS----SDGKAIA----SASRDNTIKLW 1308
Query: 65 K---LALRG--------------------SSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+ L +SA+ +T R L S +E VL S
Sbjct: 1309 NRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLE--VLAGNSGV 1366
Query: 102 YQVSV--ESLLIGHEDWVYSVQ-WEP---------PSTAPSDGVS-CQQPSSILSASMDK 148
Y VS + +I ++Q W P G+S Q I SA+ DK
Sbjct: 1367 YAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADK 1426
Query: 149 TMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGVD 208
T+ IW+ + + E++ ++SPDG+++ + LW +
Sbjct: 1427 TVKIWRVRDGKALKTLIGHDNEVNKV-------NFSPDGKTLASASRDNTVKLW-----N 1474
Query: 209 IDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRV 248
+ + + +K GH V +S+S + S S D+T R+
Sbjct: 1475 VSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRL 1514
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 110/289 (38%), Gaps = 49/289 (16%)
Query: 5 DNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIW 64
D+ + L+ QR G+ V L+GH DW+RS+ FS LV+S QD RIW
Sbjct: 1076 DHTVKLW--QRHGEEV--ATLRGHEDWVRSVHFS--------PHHQFLVTSGQDNTARIW 1123
Query: 65 KLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSV-------ESLLIGHEDWV 117
A G + V + G +L+ S + L GH WV
Sbjct: 1124 NFA--GEQLTLCQGHADWVRNAEFNCHGQILLTASRDGTARLWDLEGREIGLCQGHTSWV 1181
Query: 118 YSVQWEPPS----TAPSDGVS-----CQQPSSILSASMD-KTMMIWQP----------EK 157
+ Q+ P T +DG + Q ++L + +W P +
Sbjct: 1182 RNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQNWVNNALWSPDGQHIITSSSDG 1241
Query: 158 TTGIW-MNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQK 216
T +W + +G L +G +S DG+ I+ + LW G +
Sbjct: 1242 TARVWSRHGKCLGTLRGHDHNIHGARFSLDGQKIVTYSTDNTARLWTKEGTLL------T 1295
Query: 217 VPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF-APWKNVASLMGENSW 264
+ GH V D +S ++ +VS DQT R + K+ +L G + W
Sbjct: 1296 ILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQKDTITLTGHSHW 1344
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 91/238 (38%), Gaps = 46/238 (19%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L+GH I FSL G+ I V+ S D R+W G+ ++KEV
Sbjct: 1256 LRGHDHNIHGARFSL----DGQKI----VTYSTDNTARLW--TKEGTLLTILRGHQKEVY 1305
Query: 85 SLASYIEGPVLVAGSSS-----YQVSVESL--LIGHEDWVYSVQWEPPSTAPSDGVSCQQ 137
+G + S+ + +S + L GH WV + + P
Sbjct: 1306 DADFSADGRFVFTVSADQTARQWDISQKDTITLTGHSHWVRNAHFNPKG----------- 1354
Query: 138 PSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGG 197
+L+ S DKT +W E V L+ G +SPDG+ I+
Sbjct: 1355 -DRLLTVSRDKTARLWTTEGEC--------VAVLADHQGWVREGQFSPDGQWIVTGSADK 1405
Query: 198 AFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPWKNV 255
LW +G + V GH AV+++ +S S Y+++ S D T RV W N
Sbjct: 1406 TAQLWNVLGKKL------TVLRGHQDAVLNVRFSPDSQYIVTASKDGTARV---WNNT 1454
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 44/248 (17%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L+GH D + ++ FS S +V++S+D R+W G Y K +
Sbjct: 1420 LRGHQDAVLNVRFS--------PDSQYIVTASKDGTARVWNNT--GRELAVLRHYEKNIF 1469
Query: 85 SLASYIEGPVLVAGSSSYQVSVESLL-------IGHEDWVYSVQWEPPSTAPSDGVSCQQ 137
+ +G +V S + ++ GHE VY Q+ S
Sbjct: 1470 AAEFSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFSADS----------- 1518
Query: 138 PSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGG 197
IL+AS+D T IW ++ + H ++ Y +SP+G I
Sbjct: 1519 -RYILTASVDNTARIWD-------FLGRPLLTLAGHQSI-VYQARFSPEGNLIATVSADH 1569
Query: 198 AFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF-APWKNVA 256
LW G + V GH V + WS L++ S+D T R++ + +
Sbjct: 1570 TARLWDRSGKTV------AVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSGRELL 1623
Query: 257 SLMGENSW 264
+L G +W
Sbjct: 1624 TLEGHGNW 1631
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 117/288 (40%), Gaps = 54/288 (18%)
Query: 21 RACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYR 80
RA GH D + ++FS SG LL S S+DK +RIW ++G S ++ +
Sbjct: 53 RAYRFTGHKDAVTCVNFS----PSGH----LLASGSRDKTVRIWVPNVKGESTVFRA-HT 103
Query: 81 KEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSDG 132
V S+ +G LV S V V S L H +WV ++ P DG
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP------DG 157
Query: 133 VSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILA 192
I+SAS DKT+ +W +KT+ ++ H Y + P G I A
Sbjct: 158 ------RLIVSASDDKTVKLW--DKTSRECIH----SYCEHGGFVTYVD-FHPSGTCIAA 204
Query: 193 HGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPW 252
G +W D + + H AAV +S+ S +YL++ S D T ++
Sbjct: 205 AGMDNTVKVW-----DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKIL--- 256
Query: 253 KNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVS-GADEKV 299
LM + +HGH T+ + F S G+DE+V
Sbjct: 257 ----DLMEGRLLYT-----LHGHQGPATTVAFSRTGEYFASGGSDEQV 295
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 64/294 (21%)
Query: 20 VRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTY 79
RA GH D + ++FS SG LL S S+DK +RIW ++G S ++ +
Sbjct: 52 TRAYRFAGHKDAVTCVNFS----PSGH----LLASGSRDKTVRIWVPNVKGESTVFRA-H 102
Query: 80 RKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSD 131
V S+ +G V S V V S L H +WV ++ P D
Sbjct: 103 TATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP------D 156
Query: 132 GVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG-----HWSPD 186
G I+SAS DKT+ +W +KT+ E HS +GG + P
Sbjct: 157 G------RLIVSASDDKTVKLW--DKTS---------RECVHSYCE-HGGFVTYVDFHPS 198
Query: 187 GRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTT 246
G I A G +W D+ + + H AAV +S+ S +YL++ S D T
Sbjct: 199 GTCIAAAGMDNTVKVW-----DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 253
Query: 247 RVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVS-GADEKV 299
++ LM + +HGH T+ + F S G+DE+V
Sbjct: 254 KIL-------DLMEGRLLYT-----LHGHQGPATTVAFSRTGEYFASGGSDEQV 295
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 65/283 (22%)
Query: 17 GKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL-------------------- 51
G F R LKGHTD ++ + F L C++ I +
Sbjct: 140 GDFERT--LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197
Query: 52 ---------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSY 102
+VS+S+DK +++W++A G T + +R+ V + +G +L + S+
Sbjct: 198 VAIMPNGDHIVSASRDKTMKMWEVAT-GYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQ 256
Query: 103 QVSV--------ESLLIGHEDWVYSVQWEPPSTAP--SDGVSCQQPSS------ILSASM 146
V V ++ L HE V + W P S P S+ + S +LS S
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSR 316
Query: 147 DKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNVG 206
DKT+ +W + +TG+ + + + + F+ P GR +++ +W
Sbjct: 317 DKTIKMW--DISTGMCLMTLVGHDNWVRGVLFH-----PGGRFVVSCADDKTLRIW---- 365
Query: 207 VDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K S H V + + ++S Y+++ S DQT +V+
Sbjct: 366 -DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3
Length = 515
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 134/343 (39%), Gaps = 74/343 (21%)
Query: 2 GGLDNKIHLY---RGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQD 58
G +DN I L+ GQ G L+GH+ WI SL + P+ L SSS+D
Sbjct: 204 GSMDNTIRLWDPKSGQCLGD-----ALRGHSKWITSLSWE-PIHLVKPGSKPRLASSSKD 257
Query: 59 KVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSV---------ESL 109
I+IW R T S + V + +G +L +GS V V ++
Sbjct: 258 GTIKIWDTVSR-VCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINI 315
Query: 110 LIGHEDWV--------YSVQ---WEPPSTAPSDGVSCQQPS----------------SIL 142
L H WV Y+++ ++ PS Q+ + ++
Sbjct: 316 LKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMV 375
Query: 143 SASMDKTMMIWQPEKTTGIWMNVVTVGEL-SHSALGFYGGHWSPDGRSILAHGYGGAFHL 201
+AS D TM +W P K+T + +L +H A SPDGR I++ + + L
Sbjct: 376 TASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAF-------SPDGRYIVSASFDNSIKL 428
Query: 202 WRNV-GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPWKNVASLMG 260
W G I ++ GH A+V ++WS L+S S D T +V+ S+
Sbjct: 429 WDGRDGKFISTFR------GHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSV-- 480
Query: 261 ENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVF 303
+ GH T+ R SG +K+ R++
Sbjct: 481 ----------DLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 23/143 (16%)
Query: 110 LIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVG 169
L GH +WV V W P DG I + SMD T+ +W P+ +G + G
Sbjct: 182 LKGHYNWVLCVSWSP------DG------EVIATGSMDNTIRLWDPK--SGQCLGDALRG 227
Query: 170 ELS-HSALGFYGGHW-SPDGRSILA-HGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVM 226
++L + H P + LA G +W V Q SGH +V
Sbjct: 228 HSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVC-----QYTMSGHTNSVS 282
Query: 227 DISWSRSSDYLLSVSHDQTTRVF 249
+ W L S SHD+T RV+
Sbjct: 283 CVKWG-GQGLLYSGSHDRTVRVW 304
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 140/340 (41%), Gaps = 76/340 (22%)
Query: 23 CELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKE 82
C +GHT W+ S+ F+ +L S S DK +R+W + SS+ T++
Sbjct: 1236 CTFQGHTSWVNSVVFNPD--------GSMLASGSSDKTVRLWDI----SSSKCLHTFQGH 1283
Query: 83 ---VISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSD 131
V S+A +G +L +GS V + + GH WV SV + P T +
Sbjct: 1284 TNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLAS 1343
Query: 132 GVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHW------SP 185
G S D+T+ +W ++ GE ++ LG +W SP
Sbjct: 1344 G------------SDDQTVRLWS-----------ISSGECLYTFLGH--TNWVGSVIFSP 1378
Query: 186 DGRSILAHGYGG-AFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQ 244
DG +ILA G G LW I + + GH V I +S L S S DQ
Sbjct: 1379 DG-AILASGSGDQTVRLW-----SISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQ 1432
Query: 245 TTRVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFV-SGADEKVARVF 303
T R++ N++S GE + +HGH IN V + + + SG+D++ +++
Sbjct: 1433 TVRLW----NISS--GECLY------TLHGH-INSVRSVAFSSDGLILASGSDDETIKLW 1479
Query: 304 EAPL-SFLKTLNHATFQESSFHEDLQADVQILGANMSALG 342
+ +KTL E ++ ++ A + LG
Sbjct: 1480 DVKTGECIKTLKSEKIYEGMNITSVRGLTEVEKATLKTLG 1519
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 59/258 (22%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L+G+T W+R L FS + L + S D+++R+W ++ + Q + V
Sbjct: 1112 LQGYTSWVRFLVFS--------PNGVTLANGSSDQIVRLWDISSKKCLYTLQG-HTNWVN 1162
Query: 85 SLASYIEGPVLVAGSSSYQVSV--------ESLLIGHEDWVYSVQWEPPSTAPSDGVSCQ 136
++A +G L +GS V + +L GH WV SV + P DG
Sbjct: 1163 AVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP------DG---- 1212
Query: 137 QPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGH--------WSPDGR 188
S++ S S D+T+ +W+ S L + GH ++PDG
Sbjct: 1213 --STLASGSSDQTVRLWEIN---------------SSKCLCTFQGHTSWVNSVVFNPDGS 1255
Query: 189 SILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRV 248
+ + LW DI + + GH V ++++ L S S DQT R+
Sbjct: 1256 MLASGSSDKTVRLW-----DISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRL 1310
Query: 249 --FAPWKNVASLMGENSW 264
+ K + + G SW
Sbjct: 1311 WEISSSKCLHTFQGHTSW 1328
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 104/270 (38%), Gaps = 67/270 (24%)
Query: 16 TGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANT 75
TGK + C KGH W+ S+ FS G+ +L S S D+ +R+W + SS
Sbjct: 895 TGKELLTC--KGHNSWVNSVGFS----QDGK----MLASGSDDQTVRLWDI----SSGQC 940
Query: 76 QSTYRKEVISLASYIEGP---VLVAGSSSYQVSV------ESLLI--GHEDWVYSVQWEP 124
T++ + S + P +L +GSS V + E L I GH WVYSV +
Sbjct: 941 LKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL 1000
Query: 125 PSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGH-- 182
DG S + + S D+T+ +W + ++ + GH
Sbjct: 1001 ------DG------SMLATGSGDQTVRLWDISSSQCFYI---------------FQGHTS 1033
Query: 183 ------WSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDY 236
+S DG + + LW DI + GH + V + +S
Sbjct: 1034 CVRSVVFSSDGAMLASGSDDQTVRLW-----DISSGNCLYTLQGHTSCVRSVVFSPDGAM 1088
Query: 237 LLSVSHDQTTRV--FAPWKNVASLMGENSW 264
L S DQ R+ + + +L G SW
Sbjct: 1089 LASGGDDQIVRLWDISSGNCLYTLQGYTSW 1118
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 116/288 (40%), Gaps = 54/288 (18%)
Query: 21 RACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYR 80
RA GH D + ++FS SG LL S S+DK +RIW ++G S ++ +
Sbjct: 53 RAYRFTGHKDAVTCVNFS----PSGH----LLASGSRDKTVRIWVPNVKGESTVFRA-HT 103
Query: 81 KEVISLASYIEGPVLVAGSSSYQVSV-----ESLLIG---HEDWVYSVQWEPPSTAPSDG 132
V S+ +G V S V V + L H +WV ++ P DG
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP------DG 157
Query: 133 VSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILA 192
I+SAS DKT+ +W + G +++ + F+ P G I A
Sbjct: 158 ------RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY--VDFH-----PSGTCIAA 204
Query: 193 HGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPW 252
G +W D+ + + H AAV +S+ S +YL++ S D T ++
Sbjct: 205 AGMDNTVKVW-----DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKIL--- 256
Query: 253 KNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVS-GADEKV 299
LM + +HGH T+ + F S G+DE+V
Sbjct: 257 ----DLMEGRLLYT-----LHGHQGPATTVAFSRTGEYFASGGSDEQV 295
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 21 RACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYR 80
RA GH D + SL FS G LL S+S+DK +R+W L +G S+ ++ +
Sbjct: 52 RAYRYVGHKDVVTSLQFS----PQGN----LLASASRDKTVRLWVLDRKGKSSEFKA-HT 102
Query: 81 KEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSDG 132
V S+ +G LV S + V S+ L H WV ++ P DG
Sbjct: 103 APVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP------DG 156
Query: 133 VSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG-HWSPDGRSIL 191
I+S S DKT+ IW + T+ +N + ++GF +SP+G I
Sbjct: 157 ------RLIVSCSEDKTIKIW--DTTSKQCVNNFS------DSVGFANFVDFSPNGTCIA 202
Query: 192 AHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
+ G A +W DI + + H V +S+ S + L++ S D T ++
Sbjct: 203 SAGSDHAVRIW-----DIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKIL 255
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 73/288 (25%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++A G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVAT-GYCVKTFTGHREWVRMVRPNQDGTLIASSSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPSTAP-------SDGVSCQQPSS-ILSAS 145
V V ++ L HE V + W P S P S+ +P +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALG----FYGGHWSPDGRSILAHGYGGAFHL 201
DKT+ +W V++G + +G G P G+ I++ +
Sbjct: 316 RDKTIKMWD-----------VSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRI 364
Query: 202 WRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
W D N + K S H V + + +++ Y+++ S DQT +V+
Sbjct: 365 W-----DYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 73/288 (25%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++A G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVAT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPSTAP-------SDGVSCQQPSS-ILSAS 145
V V ++ L HE V + W P S P S+ +P +LS S
Sbjct: 256 QTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALG----FYGGHWSPDGRSILAHGYGGAFHL 201
DKT+ +W V++G + +G G P G+ IL+ +
Sbjct: 316 RDKTIKMWD-----------VSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDKTLRI 364
Query: 202 WRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
W D N + K H V + + +++ Y+++ S DQT +V+
Sbjct: 365 W-----DYKNKRCMKTLGAHEHFVTSLDFHKNAPYVVTGSVDQTVKVW 407
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 73/288 (25%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S + SD + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALG----FYGGHWSPDGRSILAHGYGGAFHL 201
DKT+ +W +++G + +G G + P G+ IL+ +
Sbjct: 316 RDKTIKMWD-----------ISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRI 364
Query: 202 WRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
W D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 365 W-----DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 50/176 (28%)
Query: 5 DNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIW 64
D I ++ Q TG V+ GH +W+R + L+ S S D+ +R+W
Sbjct: 213 DKTIKMWEVQ-TGYCVKT--FTGHREWVRMV--------RPNQDGTLIASCSNDQTVRVW 261
Query: 65 KLALRGSSANTQS-TYRKEVISLA------------------SYIEGPVLVAGSSSYQVS 105
+A + A + + E IS A S GP L++GS +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 106 VESL--------LIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIW 153
+ + L+GH++WV VQ+ P ILS + DKT+ IW
Sbjct: 322 MWDISIGMCLMTLVGHDNWVRGVQFHPGG------------KFILSCADDKTIRIW 365
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 73/288 (25%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S + SD + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALG----FYGGHWSPDGRSILAHGYGGAFHL 201
DKT+ +W +++G + +G G + P G+ IL+ +
Sbjct: 316 RDKTIKMWD-----------ISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRI 364
Query: 202 WRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
W D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 365 W-----DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 50/176 (28%)
Query: 5 DNKIHLYRGQRTGKFVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIW 64
D I ++ Q TG V+ GH +W+R + L+ S S D+ +R+W
Sbjct: 213 DKTIKMWEVQ-TGYCVKT--FTGHREWVRMV--------RPNQDGTLIASCSNDQTVRVW 261
Query: 65 KLALRGSSANTQS-TYRKEVISLA------------------SYIEGPVLVAGSSSYQVS 105
+A + A + + E IS A S GP L++GS +
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIK 321
Query: 106 VESL--------LIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIW 153
+ + L+GH++WV VQ+ P ILS + DKT+ IW
Sbjct: 322 MWDISIGMCLMTLVGHDNWVRGVQFHPGG------------KFILSCADDKTIRIW 365
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 58/291 (19%)
Query: 20 VRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTY 79
+RA GH D I S+DFS SG L+ S+S+DK +R+W +++G S ++ +
Sbjct: 51 MRAYRFVGHKDAILSVDFS----PSGH----LIASASRDKTVRLWVPSVKGESTAFKA-H 101
Query: 80 RKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSD 131
V S++ +G LV S + V ++ L H +WV ++ P D
Sbjct: 102 TGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSP------D 155
Query: 132 GVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSIL 191
G I+SAS DKT+ +W I G + F H P G I
Sbjct: 156 G------RLIVSASDDKTIKLWDKTSRECIQSFCEHGG-----FVNFVDFH--PSGTCIA 202
Query: 192 AHGYGGAFHLWR-NVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFA 250
A +W + I ++Q H V +S+ S +YL++ S+D T +V
Sbjct: 203 AAATDNTVKVWDIRMNKLIQHYQV------HSGVVNSLSFHPSGNYLITASNDSTLKV-- 254
Query: 251 PWKNVASLMGENSWHEVARPQVHGHD--INCVTIIQGKGNHRFVSGADEKV 299
+ L G + +HGH + CV + +G+ G+DE+V
Sbjct: 255 ----LDLLEGRLLY------TLHGHQGPVTCVKFSR-EGDFFASGGSDEQV 294
>sp|Q55DA2|CIAO1_DICDI Probable cytosolic iron-sulfur protein assembly protein
OS=Dictyostelium discoideum GN=ciao1 PE=3 SV=1
Length = 333
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 90/241 (37%), Gaps = 55/241 (22%)
Query: 51 LLVSSSQDKVIRIWKLALRGSSANTQST--YRKEVISLA-----SYIEGPVLVAGSSSYQ 103
+L + + DK I+IW G QS + K V +A ++ G A +S ++
Sbjct: 38 ILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWE 97
Query: 104 VSVESL-------LIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPE 156
S + L L GH V SV W+ T + + S DK++ IWQ E
Sbjct: 98 KSKDELEFTHVSSLEGHTYEVKSVAWDSTGTL------------LATCSRDKSIWIWQME 145
Query: 157 KTTGIWMNVVTVGELSHSALGFYGGH--------WSPDGRSILAHGYGGAFHLWRNVGVD 208
L GH W P+ + + Y W+++ D
Sbjct: 146 DDNDF------------ECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGD 193
Query: 209 IDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFA------PWKNVASLMGEN 262
W+ +GH +++ D+++++ D L+S D+ + W N+ EN
Sbjct: 194 ---WECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNEN 250
Query: 263 S 263
S
Sbjct: 251 S 251
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 53/244 (21%)
Query: 20 VRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTY 79
+RA GH D I S+DFS SG L+ S+S+DK +R+W +++G S ++ +
Sbjct: 51 MRAYRFVGHKDAILSVDFS----PSGH----LIASASRDKTVRLWVPSVKGESTVFKA-H 101
Query: 80 RKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSD 131
V S++ +G LV S + V ++ L H +WV ++ P D
Sbjct: 102 TGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSP------D 155
Query: 132 GVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG-----HWSPD 186
G I+SAS DKT+ +W T E HS +GG + P
Sbjct: 156 G------RLIVSASDDKTIKLWDK-----------TSRECIHS-FCEHGGFVNFVDFHPS 197
Query: 187 GRSILAHGYGGAFHLWR-NVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQT 245
G I A +W + I ++Q H V +S+ S +YL++ S+D T
Sbjct: 198 GTCIAAAATDNTVKVWDIRMNKLIQHYQV------HSGVVNSLSFHPSGNYLITASNDST 251
Query: 246 TRVF 249
+V
Sbjct: 252 LKVL 255
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 65/291 (22%)
Query: 21 RACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQS-TY 79
RA + GH + + + FS SG L+ SSS+D+ +R+W ++G S+ ++ T
Sbjct: 52 RAYKYPGHKEAVTCVQFS----PSGH----LVASSSKDRTVRLWAPNIKGESSVLKAHTA 103
Query: 80 RKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSD 131
++ +S +G + S + +L L H +WV ++ P D
Sbjct: 104 VVRCVNFSS--DGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSP------D 155
Query: 132 GVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGH-----WSPD 186
G I S S DKT+ IW + T + +N Y GH ++P
Sbjct: 156 G------RLIASCSDDKTVRIW--DITNRLCINTFVD----------YKGHSNYVDFNPM 197
Query: 187 GRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTT 246
G + + G +W DI + + H A V +S+ S +YLL+ S+D T
Sbjct: 198 GTCVASAGVDSTVKVW-----DIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTV 252
Query: 247 RVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADE 297
++ + L G + +HGH +++ K +F SGA +
Sbjct: 253 KI------LDLLEGRLIY------TLHGHQGPVLSVAFSKSGDQFASGATD 291
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 183 WSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQ----KVPSGHFAAVMDISWSRSSDYLL 238
+SPDG+ + + +W N++PQ K P GH AV + +S S +
Sbjct: 26 FSPDGKQLASSSADACVMIW--------NFKPQSRAYKYP-GHKEAVTCVQFSPSGHLVA 76
Query: 239 SVSHDQTTRVFAPWKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEK 298
S S D+T R++AP ++ GE+S + H + CV H F++ +D+K
Sbjct: 77 SSSKDRTVRLWAP-----NIKGESSVL-----KAHTAVVRCVNF--SSDGHTFITASDDK 124
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 38/191 (19%)
Query: 21 RACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYR 80
RA GH D + SL FS G LL S+S+D+ +R+W L +G S+ ++ +
Sbjct: 52 RAYRYVGHKDVVTSLQFS----PQGN----LLASASRDRTVRLWVLDRKGKSSEFKA-HT 102
Query: 81 KEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSDG 132
V S+ +G +LV S + V S+ L H WV ++ P DG
Sbjct: 103 APVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP------DG 156
Query: 133 VSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG-HWSPDGRSIL 191
I+S S DKT+ IW TT N V S S +GF ++P+G I
Sbjct: 157 ------RLIVSCSEDKTIKIWD---TT----NKQCVNNFSDS-VGFANFVDFNPNGTCIA 202
Query: 192 AHGYGGAFHLW 202
+ G A +W
Sbjct: 203 SAGSDHAVKIW 213
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 51/267 (19%)
Query: 52 LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSSYQVSV----- 106
L + +D+ IRIW +A + + + +E+ SL +G LV+GS V +
Sbjct: 361 LATGVEDQQIRIWDIAQK-RVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEA 419
Query: 107 --ESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMN 164
+ L++ +D V +V + P DG I + S+DK + IW T
Sbjct: 420 GEQKLILHTDDGVTTVMFSP------DG------QFIAAGSLDKVIRIWTSSGTL----- 462
Query: 165 VVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQP---------Q 215
V +L Y +SPDG+ +++ LW V N P +
Sbjct: 463 ---VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVS--NVAPSMYKEGGICK 517
Query: 216 KVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVFAPWKNVASLMGENSWHEVARPQVHGH 275
+ +GH ++ ++ S +++S S D+T + ++P +S H ++ + GH
Sbjct: 518 QTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP----------DSPH--SQLTLQGH 565
Query: 276 DINCVTIIQGKGNHRFVSGADEKVARV 302
+ + +++ H F +G+ + AR+
Sbjct: 566 NNSVISVAVSPNGHCFATGSGDLRARI 592
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 54/246 (21%)
Query: 19 FVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQST 78
+ C L GHT+ + S+ FS +GE L SSS D++I IW A G T
Sbjct: 31 YALKCTLVGHTEAVSSVKFS----PNGE----WLASSSADRLIIIWG-AYDGKYERTLYG 81
Query: 79 YRKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPS 130
+ E+ +A + LV+ S + + + L GH ++V+ + PPS
Sbjct: 82 HNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNL-- 139
Query: 131 DGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSI 190
I+S S D+T+ IW E TG + ++ SA+ H++ G I
Sbjct: 140 ----------IISGSFDETVKIW--EVKTGKCLKTLSAHSDPVSAV-----HFNCSGSLI 182
Query: 191 LAHGYGGAFHLWRNVG-------VDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHD 243
++ Y G +W VD DN P F + +S + Y+L+ + D
Sbjct: 183 VSGSYDGLCRIWDAASGQCLKTLVDDDN------PPVSF-----VKFSPNGKYILTATLD 231
Query: 244 QTTRVF 249
T +++
Sbjct: 232 NTLKLW 237
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
LVS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHLVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 181 GHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQP---QKVPSGHFAAVMDISWSRSSDYL 237
GH SP R I + + + + +++ ++ GH +V DIS+ S L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 238 LSVSHDQTTRV--FAPWKNVASLMGENSWHEVARPQVHGHDINCVTI-IQGKGNHRFVSG 294
S S D T ++ F ++ + ++ HGHD N ++ I G+H VS
Sbjct: 166 TSCSADMTIKLWDFQGFECIRTM--------------HGHDHNVSSVAIMPNGDH-LVSA 210
Query: 295 ADEKVARVFEAPLSF 309
+ +K +++E +
Sbjct: 211 SRDKTIKMWEVQTGY 225
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 54/240 (22%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L GHT + ++ FS +GE L SSS DK+I+IW A G T S ++ +
Sbjct: 68 LAGHTKAVSAVKFS----PNGE----WLASSSADKLIKIWG-AYDGKFEKTISGHKLGIS 118
Query: 85 SLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPSDGVSCQ 136
+A + +LV+GS + V L L GH ++V+ + P
Sbjct: 119 DVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP------------ 166
Query: 137 QPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYG 196
Q + I+S S D+++ IW + TG + + SA+ H++ DG I++ Y
Sbjct: 167 QSNLIVSGSFDESVRIW--DVRTGKCLKTLPAHSDPVSAV-----HFNRDGSLIVSSSYD 219
Query: 197 GAFHLWRNVG-------VDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
G +W +D DN V + +S + Y+L+ + D T +++
Sbjct: 220 GLCRIWDTASGQCLKTLIDDDN-----------PPVSFVKFSPNGKYILAATLDNTLKLW 268
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 54/246 (21%)
Query: 19 FVRACELKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQST 78
+ C L GHT+ + S+ FS +GE L SSS D++I IW A G T
Sbjct: 31 YALKCTLVGHTEAVSSVKFS----PNGE----WLASSSADRLIIIWG-AYDGKYEKTLYG 81
Query: 79 YRKEVISLASYIEGPVLVAGSSSYQVSVESL--------LIGHEDWVYSVQWEPPSTAPS 130
+ E+ +A + LV+ S + + + L GH ++V+ + PPS
Sbjct: 82 HNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNL-- 139
Query: 131 DGVSCQQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSI 190
I+S S D+T+ IW E TG + ++ SA+ H++ G I
Sbjct: 140 ----------IISGSFDETVKIW--EVKTGKCLKTLSAHSDPVSAV-----HFNCSGSLI 182
Query: 191 LAHGYGGAFHLWRNVG-------VDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHD 243
++ Y G +W VD DN P F + +S + Y+L+ + D
Sbjct: 183 VSGSYDGLCRIWDAASGQCLKTLVDDDN------PPVSF-----VKFSPNGKYILTATLD 231
Query: 244 QTTRVF 249
T +++
Sbjct: 232 NTLKLW 237
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S + S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DISTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 30/233 (12%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
L GH + S+ F LP SG+ LVS+S+DK I++W+++ G T + + +
Sbjct: 202 LTGHDHNVSSVAF-LP---SGD----FLVSASRDKTIKMWEVST-GYCTKTFIGHTEWIR 252
Query: 85 SLASYIEGPVLVAGSSSYQV---SVES-----LLIGHEDWVYSVQWEP-PSTAPSDGVSC 135
S+ EG +L + S+ + + SVES +L GHE V + W P S S
Sbjct: 253 SVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSM 312
Query: 136 QQPSSILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGY 195
++S S D+T+ W + GI + V+ + L F+ P GR +L+
Sbjct: 313 NSSLLLVSGSRDRTIRFW--DVNIGICLFVLIGHDNWVRQLVFH-----PHGRLLLSASD 365
Query: 196 GGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRV 248
+W D+ N + K + H V + +R + Y ++ S DQT +
Sbjct: 366 DKTIRVW-----DLKNRRCHKTLNAHSHFVTSLDVNRLAPYAITGSVDQTIHI 413
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 141 ILSASMDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGG----HWSPDGRSILAHGYG 196
+SAS D ++ +W E GE H+ G + P G+ + +
Sbjct: 137 FVSASEDASIKVWDYE-----------TGEFEHTLKGHTDSVQDVAFDPSGKFLASCSAD 185
Query: 197 GAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF--APWKN 254
LW D +Q K +GH V +++ S D+L+S S D+T +++ +
Sbjct: 186 MQVKLW-----DFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYC 240
Query: 255 VASLMGENSWHEVARPQVHGH 275
+ +G W RP G+
Sbjct: 241 TKTFIGHTEWIRSVRPSPEGN 261
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD I+ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|Q4X1Y0|PFS2_ASPFU Polyadenylation factor subunit 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pfs2
PE=3 SV=1
Length = 510
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 18/85 (21%)
Query: 183 WSPDGRSILAHGYGGAFHLWRNVGV-------------DIDNWQP-----QKVPSGHFAA 224
W+P+GR +L G+ G F LW DI W+P + + H A
Sbjct: 36 WTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDVRGQKGDIKYWRPNFNNVETIDDAHHDA 95
Query: 225 VMDISWSRSSDYLLSVSHDQTTRVF 249
V D++WS S LS S D T ++F
Sbjct: 96 VRDLAWSPSDTKFLSASDDTTLKIF 120
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD + + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+S+DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>sp|Q7RY68|PFS2_NEUCR Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pfs-2 PE=3 SV=2
Length = 660
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 183 WSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSH 242
W+P+GR +L G F LW G + + + H +A+ + +S S D+L+S H
Sbjct: 104 WTPEGRRLLTASSSGEFTLWNGTGFNF-----ETIMQAHDSAIRALVYSHSDDWLVSADH 158
Query: 243 DQTTRVFAP-WKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVAR 301
D + + P + NV S + GH + + +FV+ +D++ +
Sbjct: 159 DGIIKYWQPNFNNVES--------------IRGHTDPIRDLAFSPNDTKFVTASDDQTLK 204
Query: 302 VFE 304
VF+
Sbjct: 205 VFD 207
>sp|Q5AZX0|PFS2_EMENI Polyadenylation factor subunit 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pfs2 PE=3 SV=1
Length = 567
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 183 WSPDGRSILAHGYGGAFHLWRNVGV---------DIDNWQP-----QKVPSGHFAAVMDI 228
W+P+GR +L G+ G F LW D+ W+P + + H AV D+
Sbjct: 102 WTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDKGDVKYWRPNFNNVETIDDAHHDAVRDL 161
Query: 229 SWSRSSDYLLSVSHDQTTRVF 249
+WS S LS S D T +++
Sbjct: 162 AWSPSDTKFLSASDDTTLKIY 182
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 16 TGKFVRACELKGHTDWIRSLDFS-----LPVCTSGEAISIL------------------- 51
TG F R LKGHTD ++ + F L C++ I +
Sbjct: 139 TGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 52 ----------LVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYIEGPVLVAGSSS 101
+VS+++DK I++W++ G T + +R+ V + +G ++ + S+
Sbjct: 197 SVAIMPNGDHIVSAARDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 102 YQVSV--------ESLLIGHEDWVYSVQWEPPS--TAPSDGVSCQQPSS------ILSAS 145
V V ++ L HE V + W P S ++ S+ + S +LS S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 146 MDKTMMIWQPEKTTGIWMNVVTVGELSHSALGFYGGHWSPDGRSILAHGYGGAFHLWRNV 205
DKT+ +W + +TG+ + + + + F+ G G+ IL+ +W
Sbjct: 316 RDKTIKMW--DVSTGMCLMTLVGHDNWVRGVLFHSG-----GKFILSCADDKTLRVW--- 365
Query: 206 GVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQTTRVF 249
D N + K + H V + + +++ Y+++ S DQT +V+
Sbjct: 366 --DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 181 GHWSPDGRSILAHGYGGAFHLWRNVGVDIDNWQP---QKVPSGHFAAVMDISWSRSSDYL 237
GH SP R I + + + + +++ ++ GH +V DIS+ S L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 238 LSVSHDQTTRV--FAPWKNVASLMGENSWHEVARPQVHGHDINCVTI-IQGKGNHRFVSG 294
S S D T ++ F ++ + ++ HGHD N ++ I G+H VS
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTM--------------HGHDHNVSSVAIMPNGDH-IVSA 210
Query: 295 ADEKVARVFEAPLSF 309
A +K +++E +
Sbjct: 211 ARDKTIKMWEVQTGY 225
>sp|Q4I7X1|PFS2_GIBZE Polyadenylation factor subunit 2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PFS2 PE=3
SV=1
Length = 612
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 183 WSPDGRSILAHGYGGAFHLWRNVGVDIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSH 242
W+P+GR +L G F LW G + + + H +A+ + +S S D+L+S H
Sbjct: 103 WTPEGRRLLTASTSGEFTLWNGTGFNF-----ETIMQAHDSAIRALEYSHSDDWLISADH 157
Query: 243 DQTTRVFAP-WKNVASLMGENSWHEVARPQVHGHDINCVTIIQGKGNHRFVSGADEKVAR 301
D + + P + NV S ++ H + + +FV+ +D+ +
Sbjct: 158 DGAVKYWQPNFNNVQS--------------INAHTDPIRDLAFSPSDSKFVTASDDSTLK 203
Query: 302 VFEAPLSFLKT 312
+F+ L +++
Sbjct: 204 IFDFALGQMES 214
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 31 WIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVISLASYI 90
+IRS+ FS G+ L + ++DK+IRIW L + T + +++ SL +
Sbjct: 408 YIRSVCFS----PDGK----FLATGAEDKLIRIWDLETK-KIVMTLKGHEQDIYSLDYFP 458
Query: 91 EGPVLVAGSSSYQVSVESLLIGHEDWVYSVQWEPPSTAPSDGVSCQQPSSILSASMDKTM 150
G LV+GS V + L G S++ + A S G + I + S+D+T+
Sbjct: 459 SGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPG----EGKFIAAGSLDRTV 514
Query: 151 MIWQPEKTTGIWMNVVTVGELSHSALG------FYGGHWSPDGRSILAHGYGGAFHLWRN 204
+W + TG + + S + LG Y ++ DG+ +++ + LW
Sbjct: 515 RVW--DSDTGFLVERLD----SENELGTGHRDSVYSVVFTRDGKGVVSGSLDRSVKLWNL 568
Query: 205 VGV--DIDNWQPQKVPSGHFAAVMDISWSRSSDYLLSVSHDQ 244
G+ + + + +GH V+ ++ +++ +Y+LS S D+
Sbjct: 569 NGLSGQKSHAECEVTYTGHKDFVLSVATTQNDEYILSGSKDR 610
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 58/144 (40%), Gaps = 36/144 (25%)
Query: 25 LKGHTDWIRSLDFSLPVCTSGEAISILLVSSSQDKVIRIWKLALRGSSANTQSTYRKEVI 84
LKGH I SLD+ P SG LVS S D+ +RIW L G+ + T S
Sbjct: 444 LKGHEQDIYSLDY-FP---SGNK----LVSGSGDRTVRIWDLTT-GTCSLTLSIEDGVTT 494
Query: 85 SLASYIEGPVLVAGSSSYQVSV---------------ESLLIGHEDWVYSVQWEPPSTAP 129
S EG + AGS V V L GH D VYSV
Sbjct: 495 VAVSPGEGKFIAAGSLDRTVRVWDSDTGFLVERLDSENELGTGHRDSVYSV--------- 545
Query: 130 SDGVSCQQPSSILSASMDKTMMIW 153
V + ++S S+D+++ +W
Sbjct: 546 ---VFTRDGKGVVSGSLDRSVKLW 566
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,807,019
Number of Sequences: 539616
Number of extensions: 5559062
Number of successful extensions: 17911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 650
Number of HSP's that attempted gapping in prelim test: 14646
Number of HSP's gapped (non-prelim): 2698
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)