BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048517
(453 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 152/293 (51%), Gaps = 29/293 (9%)
Query: 155 LPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF--------- 203
L E+ +++F++K LG+GGFG VYKG+L G L+AVK ++ + E
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMI 89
Query: 204 -------INELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
+ L G C +R LVY YM NGS+ + + K IALG+A
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 149
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG+ YLH+ CD I+H D+K NILLD F V DFGLAK ++ V + RGTIG
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIG 208
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM-NATRSSKAYFPSWVYDQLNK 375
++APE +S G S K+DV+G+G++LLE+ G+R ++ WV L +
Sbjct: 209 HIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 376 GG-----DLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 423
D++L+ + E + +L + L C Q +RP M++V+ MLEG
Sbjct: 267 KKLEALVDVDLQGNYKDEEV--EQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 150/292 (51%), Gaps = 29/292 (9%)
Query: 155 LPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF--------- 203
L E+ +++F +K LG+GGFG VYKG+L G L+AVK ++ + E
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMI 81
Query: 204 -------INELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
+ L G C +R LVY YM NGS+ + + K IALG+A
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG+ YLH+ CD I+H D+K NILLD F V DFGLAK ++ V + RG IG
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIG 200
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM-NATRSSKAYFPSWVYDQLNK 375
++APE +S G S K+DV+G+G++LLE+ G+R ++ WV L +
Sbjct: 201 HIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 376 GG-----DLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 422
D++L+ + E + +L + L C Q +RP M++V+ MLEG
Sbjct: 259 KKLEALVDVDLQGNYKDEEV--EQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 147/289 (50%), Gaps = 30/289 (10%)
Query: 155 LPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKMM--ENSK------------- 197
L ++ TN+F HK +G G FG VYKG L G +A+K E+S+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 198 FSAEEFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR 257
F + L+G C E + L+Y+YM NG+L RH++ + + E+ EI +G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G+ YLH I+H D+K NILLD NF+PK++DFG++K + + +GT+GY
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 377
+ PE + G ++ KSDVY FG+VL E+ R++ + + W + N G
Sbjct: 208 IDPEYFIK--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 378 -----DLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
D L + ES+ RK + C+ + + DRPSM VL LE
Sbjct: 265 LEQIVDPNLADKIRPESL--RKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 30/289 (10%)
Query: 155 LPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKMM--ENSK------------- 197
L ++ TN+F HK +G G FG VYKG L G +A+K E+S+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 198 FSAEEFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR 257
F + L+G C E + L+Y+YM NG+L RH++ + + E+ EI +G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G+ YLH I+H D+K NILLD NF+PK++DFG++K + +GT+GY
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 377
+ PE + G ++ KSDVY FG+VL E+ R++ + + W + N G
Sbjct: 208 IDPEYFIK--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 378 -----DLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
D L + ES+ RK + C+ + + DRPSM VL LE
Sbjct: 265 LEQIVDPNLADKIRPESL--RKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 137/299 (45%), Gaps = 49/299 (16%)
Query: 157 EIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF----- 203
E+ VTN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 204 -------------INELLGLCSEGFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPH 249
+ ELLG S+G LVY YMPNGSL DR S +
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSWHMRC 136
Query: 250 EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
+IA G A GI +LH + H DIK NILLD F K+SDFGLA+ K V S
Sbjct: 137 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-------RRNSNMNATRSSK 362
GT Y+APE + G ++ KSD+Y FG+VLLE+ G R + +
Sbjct: 194 RIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 363 AYFPSWVYDQLNKGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
+ D ++K + + T +E+M + + C+ K RP + KV ++L+
Sbjct: 251 EDEEKTIEDYIDK--KMNDADSTSVEAMYS-----VASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 136/299 (45%), Gaps = 49/299 (16%)
Query: 157 EIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF----- 203
E+ VTN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 204 -------------INELLGLCSEGFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPH 249
+ ELLG S+G LVY YMPNGSL DR S +
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSWHMRC 130
Query: 250 EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
+IA G A GI +LH + H DIK NILLD F K+SDFGLA+ K V
Sbjct: 131 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-------RRNSNMNATRSSK 362
GT Y+APE + G ++ KSD+Y FG+VLLE+ G R + +
Sbjct: 188 RIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 244
Query: 363 AYFPSWVYDQLNKGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
+ D ++K + + T +E+M + + C+ K RP + KV ++L+
Sbjct: 245 EDEEKTIEDYIDK--KMNDADSTSVEAMYS-----VASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 136/299 (45%), Gaps = 49/299 (16%)
Query: 157 EIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF----- 203
E+ VTN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 204 -------------INELLGLCSEGFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPH 249
+ ELLG S+G LVY YMPNGSL DR S +
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSWHMRC 136
Query: 250 EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
+IA G A GI +LH + H DIK NILLD F K+SDFGLA+ K V
Sbjct: 137 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-------RRNSNMNATRSSK 362
GT Y+APE + G ++ KSD+Y FG+VLLE+ G R + +
Sbjct: 194 RIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 363 AYFPSWVYDQLNKGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
+ D ++K + + T +E+M + + C+ K RP + KV ++L+
Sbjct: 251 EDEEKTIEDYIDK--KMNDADSTSVEAMYS-----VASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 128/292 (43%), Gaps = 35/292 (11%)
Query: 157 EIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF----- 203
E+ VTN+F +K G+GGFG VYKG ++ + K+ + EE
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 204 -------------INELLGLCSEGFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPH 249
+ ELLG S+G LVY Y PNGSL DR S +
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLSWHXRC 127
Query: 250 EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
+IA G A GI +LH + H DIK NILLD F K+SDFGLA+ K V S
Sbjct: 128 KIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV 369
GT Y APE + G ++ KSD+Y FG+VLLE+ G + + +
Sbjct: 185 RIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 370 YDQLNKGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
D+ D + + +S + C+ K RP + KV ++L+
Sbjct: 242 EDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 38/274 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ + E K F ++K +IA TARG++YLH
Sbjct: 76 YSTKP-QLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS--- 128
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEI 387
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVGRGSLSP--DLSKV 238
Query: 388 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
S +++ + C++ K +RPS ++L +E
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 36/273 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINELLGL------------- 210
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
S + A+V ++ SL H+ + E K F ++K +IA TARG++YLH I
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFGT 329
+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 330 VSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 388
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVGRGSLSP--DLSKVR 251
Query: 389 SMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
S +++ + C++ K +RPS ++L +E
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 38/274 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ + E K F ++K +IA TARG++YLH
Sbjct: 88 YSTKP-QLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS--- 140
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEI 387
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVGRGSLSP--DLSKV 250
Query: 388 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
S +++ + C++ K +RPS ++L +E
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 24/201 (11%)
Query: 164 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAE---EFINEL------------- 207
+ K+G G FG+V++ + H G +AVK++ F AE EF+ E+
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 208 -LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
+G ++ ++V EY+ GSL R + K + + +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
+ I+H ++K N+L+D + KV DFGL++ K + F+S GT ++APE++
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 327 FGTVSCKSDVYGFGMVLLEMA 347
+ KSDVY FG++L E+A
Sbjct: 215 --PSNEKSDVYSFGVILWELA 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 24/201 (11%)
Query: 164 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAE---EFINEL------------- 207
+ K+G G FG+V++ + H G +AVK++ F AE EF+ E+
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 208 -LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
+G ++ ++V EY+ GSL R + K + + +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
+ I+H D+K N+L+D + KV DFGL++ K + F+ GT ++APE++
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 327 FGTVSCKSDVYGFGMVLLEMA 347
+ KSDVY FG++L E+A
Sbjct: 215 --PSNEKSDVYSFGVILWELA 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 27/211 (12%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF------------- 203
EI A + ++G G FG+VYKG+ H +AVK+++ + E+F
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 204 --INELL--GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGI 259
+N LL G ++ A+V ++ SL +H+ +E K Q F L +IA TA+G+
Sbjct: 90 RHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLI---DIARQTAQGM 145
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+YLH I+H D+K +NI L K+ DFGLA + + + G++ ++A
Sbjct: 146 DYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 320 PELIS-RNFGTVSCKSDVYGFGMVLLEMAGG 349
PE+I ++ S +SDVY +G+VL E+ G
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F ++G G FG V+ G +A+K + S E+FI E L G+
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C E LV+E+M +G L ++ ++ F E + L G+ YL + C+
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EACV 127
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 184
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG+++ E+
Sbjct: 185 SSKSDVWSFGVLMWEV 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F ++G G FG V+ G +A+K + S E+FI E L G+
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C E LV+E+M +G L ++ ++ F E + L G+ YL + C+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EACV 124
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 181
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG+++ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F ++G G FG V+ G +A+K + S E+FI E L G+
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C E LV+E+M +G L ++ ++ F E + L G+ YL + C+
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EACV 122
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 179
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG+++ E+
Sbjct: 180 SSKSDVWSFGVLMWEV 195
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 26/208 (12%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF---------------INELLGLC 211
++G G FG+VYKG+ H +AVKM+ + + ++ +N LL +
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 212 -SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
S + A+V ++ SL H+ E K F + K +IA TA+G++YLH I
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFGT 329
+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 330 VSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 72 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 74 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 77 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 129
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 77 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 129
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F ++G G FG V+ G +A+K + S E+FI E L G+
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C E LV E+M +G L ++ ++ F E + L G+ YL + C+
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EACV 125
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 182
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG+++ E+
Sbjct: 183 SSKSDVWSFGVLMWEV 198
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 99 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 151
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F ++G G FG V+ G +A+K ++ S ++FI E L G+
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C E LV+E+M +G L ++ ++ F E + L G+ YL + C+
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EACV 144
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 201
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG+++ E+
Sbjct: 202 SSKSDVWSFGVLMWEV 217
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 100 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 152
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 72 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 92 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 144
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE---FINEL--------------LG 209
++G G FG+VYKG+ H +AVKM+ + + ++ F NE+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
++ + A+V ++ SL H+ E K F + K +IA TA+G++YLH
Sbjct: 100 YSTKP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 152
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-RNFG 328
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 329 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 356
S +SDVY FG+VL E M G SN+N
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F ++G G FG V+ G +A+K + S E+FI E L G+
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C E LV+E+M +G L ++ ++ F E + L G+ YL + +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EASV 124
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 181
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG+++ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE---------- 206
EI + +LG G FG V+ G + +AVK ++ S + F+ E
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
L + + ++ EYM GSL F K ++G L K + + A G+ Y+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPEL 322
+H D++ N+L+ + + K++DFGLA+ ++N++ + + I + APE
Sbjct: 127 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 182
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAG-------GRRNSNMNATRSSKAYFP 366
I NFG + KSDV+ FG++L E+ GR N+++ S P
Sbjct: 183 I--NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 78 E-PIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 131
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 188
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 189 SDVWSFGILLTELTTKGR 206
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 76 E-PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 129
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 186
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 187 SDVWSFGILLTELTTKGR 204
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 251 E-PIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 251 E-PIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 74 E-PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 127
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 184
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 185 SDVWSFGILLTELTTKGR 202
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 36/275 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY G L +AVK ++ EEF+ E LLG+C
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ +V EYMP G+L ++ + N+ + + + +A + +EYL +
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLY-MATQISSAMEYLEKKN---FI 152
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N T S
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--TFS 209
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A + S VYD L KG +E
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYDLLEKGYRMEQ------PEGC 256
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
K+ + C + ADRPS + + E D
Sbjct: 257 PPKVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 251 E-PIYIVGEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVCEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 75 E-PIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 128
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N+ + + I + APE + +G + K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIK 185
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 186 SDVWSFGILLTELTTKGR 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 74 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE I
Sbjct: 132 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 187
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 188 --NYGTFTIKSDVWSFGILLTEI 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 75 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE I
Sbjct: 133 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 188
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 189 --NYGTFTIKSDVWSFGILLTEI 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE---------- 206
EI + KLG G FG V+ + +AVK M+ S E F+ E
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 207 -LLGLCSEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
L+ L + K ++ E+M GSL F K ++G L K + + A G+ ++
Sbjct: 71 KLVKLHAVVTKEPIYIITEFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+H D++ NIL+ + + K++DFGLA+ ++N++ + + I + APE I
Sbjct: 129 QR---NYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAI 184
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
NFG+ + KSDV+ FG++L+E+
Sbjct: 185 --NFGSFTIKSDVWSFGILLMEI 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE I
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 182
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEI 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 334 E-PIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 444
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 445 SDVWSFGILLTEL 457
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D+ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 79 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE I
Sbjct: 137 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 192
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 193 --NYGTFTIKSDVWSFGILLTEI 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 64 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE I
Sbjct: 122 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 177
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 178 --NYGTFTIKSDVWSFGILLTEI 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + +++ A G+ Y+ + +H
Sbjct: 82 E-PIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 192
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + +++ A G+ Y+ + +H
Sbjct: 82 E-PIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPE--AALYGRFTIK 192
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 29/231 (12%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE---------- 206
EI + KLG G FG V+ G + +AVK ++ S + F+ E
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 207 -LLGLCSEGFKRALVY---EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
L+ L + K +Y E+M GSL F K ++G L K + + A G+ Y+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPEL 322
+H D++ N+L+ + + K++DFGLA+ ++N++ + + I + APE
Sbjct: 126 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 181
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAG-------GRRNSNMNATRSSKAYFP 366
I NFG + KS+V+ FG++L E+ GR N+++ + S P
Sbjct: 182 I--NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM G L F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVMEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N+ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL F K G+ L + ++A A G+ Y+ + +H
Sbjct: 252 E-PIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGL + ++N++ + + I + APE + +G + K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 362
Query: 334 SDVYGFGMVLLEMAGGRR 351
SDV+ FG++L E+ R
Sbjct: 363 SDVWSFGILLTELTTKGR 380
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE---------- 206
EI + KLG G FG V+ + +AVK M+ S E F+ E
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 207 -LLGLCSEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
L+ L + K ++ E+M GSL F K ++G L K + + A G+ ++
Sbjct: 244 KLVKLHAVVTKEPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+H D++ NIL+ + + K++DFGLA+ ++N++ + + I + APE I
Sbjct: 302 QR---NYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAI 357
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
NFG+ + KSDV+ FG++L+E+
Sbjct: 358 --NFGSFTIKSDVWSFGILLMEI 378
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
KLGQG FG V+ G + +A+K ++ S E F+ E L + SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM G L F K G+ L + ++A A G+ Y+ + +H
Sbjct: 85 E-PIYIVTEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 334 SDVYGFGMVLLEM 346
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 182
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEI 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 78 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 136 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 191
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 192 --NYGTFTIKSDVWSFGILLTEI 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 71 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 129 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 184
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 185 --NYGTFTIKSDVWSFGILLTEI 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 70 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 128 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 183
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 184 --NYGTFTIKSDVWSFGILLTEI 204
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 182
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEI 203
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 77 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 135 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 190
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 191 --NYGTFTIKSDVWSFGILLTEI 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSRGSKFPVRWSPPEVLM--YSKF 183
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 75 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE I
Sbjct: 133 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAI 188
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 189 --NYGTFTIKSDVWSFGILLTEI 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 121
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 178
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 179 SSKSDIWAFGVLMWEI 194
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 125
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 182
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 183 SSKSDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 183
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE---------- 206
EI + +LG G FG V+ G + +A+K ++ S E F+ E
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
L + SE +V EYM GSL F K+ +G+ L ++A A G+ Y+
Sbjct: 65 KLVQLYAVVSEE-PIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPEL 322
+ +H D++ NIL+ + I K++DFGLA+ ++N+ + + I + APE
Sbjct: 122 ER---MNYIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPE- 176
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAGGRR 351
+ +G + KSDV+ FG++L E+ R
Sbjct: 177 -AALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + F + + + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-FTAHAGAKFPIKWTAPESLAYN--KFS 188
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMER------PEGC 235
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G FG V+ G + +AVK ++ S + F+ E + +
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 65 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H +++ NIL+ K++DFGLA+ ++N++ + + I + APE I
Sbjct: 123 ---ERNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI 178
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 179 --NYGTFTIKSDVWSFGILLTEI 199
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 132
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 189
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 190 SSKSDIWAFGVLMWEI 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 198
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 63/288 (21%)
Query: 169 LGQGGFGSVYKGQLHTGR-----LIAVKMMENSKFSAE--EFINE--------------L 207
+G G FG VYKG L T +A+K ++ + +F+ E L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
G+ S+ ++ EYM NG+LD+ F +E G+ F + + + G A G++YL N
Sbjct: 112 EGVISKYKPMMIITEYMENGALDK--FLREKDGE-FSVLQLVGMLRGIAAGMKYLAN--- 165
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG---TIGYLAPELIS 324
+ +H D+ NIL++ N + KVSDFGL++ E+D + T G I + APE IS
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 325 -RNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSW------VYDQLNKG 376
R F + SDV+ FG+V+ E M G R P W V +N G
Sbjct: 224 YRKF---TSASDVWSFGIVMWEVMTYGER--------------PYWELSNHEVMKAINDG 266
Query: 377 GDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 424
L + S I + + + C Q + A RP ++ +L+ I
Sbjct: 267 --FRLPTPMDCPSAIYQLM----MQCWQQERARRPKFADIVSILDKLI 308
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 32/218 (14%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRL---IAVKMMEN--SKFSAEEFINE---- 206
EI A H +G G G V G+L G+ +A+K ++ ++ +F++E
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ + G +V EYM NGSLD F + + GQ F + + + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-- 314
G+ YL D+ +H D+ N+L+D N + KVSDFGL++ + D + + T G
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AAXTTTGGKIP 217
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
I + APE I+ F T S SDV+ FG+V+ E +A G R
Sbjct: 218 IRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGL 210
F +LG G FG V G+ +A+KM++ S +EFI E L G+
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
C++ ++ EYM NG L ++ ++ QT ++ E+ +EYL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
LH D+ N L++ + KVSDFGL+++ + + S+ ++ + + PE++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG-SKFPVRWSPPEVLM--YSKF 198
Query: 331 SCKSDVYGFGMVLLEM 346
S KSD++ FG+++ E+
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 32/218 (14%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRL---IAVKMMEN--SKFSAEEFINE---- 206
EI A H +G G G V G+L G+ +A+K ++ ++ +F++E
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ + G +V EYM NGSLD F + + GQ F + + + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-- 314
G+ YL D+ +H D+ N+L+D N + KVSDFGL++ + D + + T G
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AAYTTTGGKIP 217
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
I + APE I+ F T S SDV+ FG+V+ E +A G R
Sbjct: 218 IRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G FG VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYN--KFS 188
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMER------PEGC 235
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYN--KFS 188
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMER------PEGC 235
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER------PEGC 242
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER------PEGC 242
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 27/195 (13%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLGLCSE 213
+LG G FG V G+ +AVKM++ S +EF E G+CS+
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH--EIALGTARGIEYLHNGCDVCIL 271
+ +V EY+ NG L ++ S GLE E+ G+ +L + +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESHQ---FI 126
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+D + KVSDFG+ ++ ++ +VS T+ + + APE+ ++ S
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAPEVF--HYFKYS 183
Query: 332 CKSDVYGFGMVLLEM 346
KSDV+ FG+++ E+
Sbjct: 184 SKSDVWAFGILMWEV 198
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYN--KFS 191
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 192 IKSDVWAFGVLLWEIA 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 34/229 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLH-TGRL---IAVKMME-- 194
H Y Q V EI A +G G FG V G+L G+ +A+K ++
Sbjct: 3 HTYEDPNQAVHE-FAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG 61
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F K+N G
Sbjct: 62 YTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD--TFLKKNDG 119
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G + G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 120 Q-FTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 174
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
E+D + TRG I + APE I+ F + SDV+ +G+V+ E+
Sbjct: 175 -EDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEV 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYN--KFS 192
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 193 IKSDVWAFGVLLWEIA 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 137
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 194
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTEIESMI 391
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER------PEGC 241
Query: 392 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 192
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 193 IKSDVWAFGVLLWEIA 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 146
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 203
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 204 IKSDVWAFGVLLWEIA 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 192
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 193 IKSDVWAFGVLLWEIA 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE---------- 206
EI + KLG G FG V+ + +AVK M+ S E F+ E
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 207 -LLGLCSEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
L+ L + K ++ E+M GSL F K ++G L K + + A G+ ++
Sbjct: 238 KLVKLHAVVTKEPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+H D++ NIL+ + + K++DFGLA+ K I + APE I
Sbjct: 296 QR---NYIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAI 341
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
NFG+ + KSDV+ FG++L+E+
Sbjct: 342 --NFGSFTIKSDVWSFGILLMEI 362
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFK 216
E+ T +LG G G V+ G + +AVK ++ S + F+ E + +
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 217 RA-------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
R ++ EYM NGSL F K G + K ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ +H D++ NIL+ K++DFGLA+ ++ + + + I + APE I
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEAI 182
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
N+GT + KSDV+ FG++L E+
Sbjct: 183 --NYGTFTIKSDVWSFGILLTEI 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+ N L+ N + KV+DFGL++ + + + + I + APE ++ N S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYN--KFS 191
Query: 332 CKSDVYGFGMVLLEMA 347
KSDV+ FG++L E+A
Sbjct: 192 IKSDVWAFGVLLWEIA 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 52/294 (17%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GR---LIAVKMMEN--SKFSAEEFINE---- 206
EI A +G G FG V G+L G+ +A+K ++ + +F++E
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ ++ ++ EYM NGSLD F ++N G+ F + + + G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGR-FTVIQLVGMLRGIG 141
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG--- 313
G++YL D+ +H D+ NIL++ N + KVSDFG+++ E+D + TRG
Sbjct: 142 SGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI 196
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQ 372
I + APE I+ + + SDV+ +G+V+ E M+ G R P W
Sbjct: 197 PIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER--------------PYWDMSN 240
Query: 373 LN--KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 424
+ K + R ++ IA M+ W Q + +DRP +++ ML+ I
Sbjct: 241 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLI 292
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 32/207 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGR---LIAVKMMEN--SKFSAEEFINE--------------LL 208
+G G FG V G L G+ +A+K +++ ++ +F++E L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ ++ ++ E+M NGSLD F ++N GQ F + + + G A G++YL D+
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADM 154
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG---TIGYLAPELISR 325
+H D+ NIL++ N + KVSDFGL++F + + + G I + APE I
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 212
Query: 326 NFGTVSCKSDVYGFGMVLLE-MAGGRR 351
+ + SDV+ +G+V+ E M+ G R
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 52/294 (17%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GR---LIAVKMMEN--SKFSAEEFINE---- 206
EI A +G G FG V G+L G+ +A+K ++ + +F++E
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ ++ ++ EYM NGSLD F ++N G+ F + + + G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGR-FTVIQLVGMLRGIG 126
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG--- 313
G++YL D+ +H D+ NIL++ N + KVSDFG+++ E+D + TRG
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI 181
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQ 372
I + APE I+ + + SDV+ +G+V+ E M+ G R P W
Sbjct: 182 PIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER--------------PYWDMSN 225
Query: 373 LN--KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 424
+ K + R ++ IA M+ W Q + +DRP +++ ML+ I
Sbjct: 226 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLI 277
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H Y QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 24 HTYEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 83 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 140
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 141 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 195
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 196 -EDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 247
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 52/291 (17%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GR---LIAVKMMENSKFSAE--EFINE---- 206
EI A +G G FG V G+L G+ +A+K ++ + +F++E
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ ++ ++ EYM NGSLD F ++N G+ F + + + G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGR-FTVIQLVGMLRGIG 120
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG--- 313
G++YL D+ +H D+ NIL++ N + KVSDFG+++ E+D + TRG
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI 175
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQ 372
I + APE I+ + + SDV+ +G+V+ E M+ G R P W
Sbjct: 176 PIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER--------------PYWDMSN 219
Query: 373 LN--KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
+ K + R ++ IA M+ W Q + +DRP +++ ML+
Sbjct: 220 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 268
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H Y QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTYEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H Y QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTYEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 37/236 (15%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H + QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTFEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGLA+
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 249
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 44/274 (16%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 286 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 340
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 397
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP----SWVYDQLNKGGDLELRNVTEI 387
KSDV+ FG++L E+A + +P S VY+ L K +E
Sbjct: 398 IKSDVWAFGVLLWEIA-----------TYGMSPYPGIDLSQVYELLEKDYRMER------ 440
Query: 388 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 44/274 (16%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 283 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 337
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 394
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP----SWVYDQLNKGGDLELRNVTEI 387
KSDV+ FG++L E+A + +P S VY+ L K +E
Sbjct: 395 IKSDVWAFGVLLWEIA-----------TYGMSPYPGIDLSQVYELLEKDYRMER------ 437
Query: 388 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 438 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 32/207 (15%)
Query: 169 LGQGGFGSVYKGQLHT-GR---LIAVKMMEN--SKFSAEEFINE--------------LL 208
+G G FG V +G+L G+ +A+K ++ ++ EF++E L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ + ++ E+M NG+LD F + N GQ F + + + G A G+ YL ++
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 135
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG---TIGYLAPELISR 325
+H D+ NIL++ N + KVSDFGL++F + + + + + G I + APE I+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA- 194
Query: 326 NFGTVSCKSDVYGFGMVLLE-MAGGRR 351
F + SD + +G+V+ E M+ G R
Sbjct: 195 -FRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 44/274 (16%)
Query: 167 HKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINE--------------LLGLC 211
HKLG G +G VY+G L +AVK ++ EEF+ E LLG+C
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ ++ E+M G+L ++ +E Q +A + +EYL +
Sbjct: 325 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 379
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 436
Query: 332 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP----SWVYDQLNKGGDLELRNVTEI 387
KSDV+ FG++L E+A + +P S VY+ L K +E
Sbjct: 437 IKSDVWAFGVLLWEIA-----------TYGMSPYPGIDLSQVYELLEKDYRMER------ 479
Query: 388 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
K+ + C Q +DRPS ++ + E
Sbjct: 480 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + E P ++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK-EAPEDLYKDFLTLEHLICY 155
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D
Sbjct: 156 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 213 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 37/236 (15%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H + QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTFEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 249
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 32/207 (15%)
Query: 169 LGQGGFGSVYKGQLHT-GR---LIAVKMMEN--SKFSAEEFINE--------------LL 208
+G G FG V +G+L G+ +A+K ++ ++ EF++E L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ + ++ E+M NG+LD F + N GQ F + + + G A G+ YL ++
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 137
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKF-HPKENDFVSISDTRGT--IGYLAPELISR 325
+H D+ NIL++ N + KVSDFGL++F +D S G I + APE I+
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA- 196
Query: 326 NFGTVSCKSDVYGFGMVLLE-MAGGRR 351
F + SD + +G+V+ E M+ G R
Sbjct: 197 -FRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 37/233 (15%)
Query: 144 RTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME--NSK 197
R + QTV E+ A +G G FG V G+L +A+K ++ ++
Sbjct: 17 RGSTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 75
Query: 198 FSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF 243
+F+ E L G+ ++ +V EYM NGSLD F +++ Q F
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-F 132
Query: 244 GLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 303
+ + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++ E+
Sbjct: 133 TVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--ED 187
Query: 304 DFVSISDTRG---TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
D + TRG I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 188 DPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 237
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 37/236 (15%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H + QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTFEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H + QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTFEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 37/210 (17%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFG--------LEKPHEIALGTA 256
LLG C++ G ++ E+ G+L ++ SK N+ + LE + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
+G+E+L + + H D+ NILL + K+ DFGLA+ K+ D+V D R +
Sbjct: 155 KGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
++APE I T+ +SDV+ FG++L E+
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 47/212 (22%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKM------------MENSKFSAEEF-------INELLG 209
+G GGFG VY+ G +AVK +EN + A+ F I L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI----ALGTARGIEYLHNG 265
+C + LV E+ G L+R + K P +I A+ ARG+ YLH+
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKR---------IPPDILVNWAVQIARGMNYLHDE 124
Query: 266 CDVCILHFDIKPHNILLDH--------NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
V I+H D+K NIL+ N I K++DFGLA +E + G +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAW 180
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+APE+I + S SDV+ +G++L E+ G
Sbjct: 181 MAPEVIRASM--FSKGSDVWSYGVLLWELLTG 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 35/235 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H + QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTFEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V EYM NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL +
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 32/207 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGR---LIAVKMMEN--SKFSAEEFINE--------------LL 208
+G G FG V G L G+ +A+K +++ ++ +F++E L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ ++ ++ E+M NGSLD F ++N GQ F + + + G A G++YL D+
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADM 128
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG---TIGYLAPELISR 325
+H + NIL++ N + KVSDFGL++F + + + G I + APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 186
Query: 326 NFGTVSCKSDVYGFGMVLLE-MAGGRR 351
+ + SDV+ +G+V+ E M+ G R
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGER 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 153 ILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN--- 205
+L+ IA T +G+G FG V++G+ G +AVK+ E S F E
Sbjct: 21 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM 79
Query: 206 ----ELLGLCSEGFKR-------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG 254
+LG + K LV +Y +GSL F N+ T +E ++AL
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALS 134
Query: 255 TARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
TA G+ +LH I H D+K NIL+ N ++D GLA H D + I+
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 194
Query: 310 DTR--GTIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 347
GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 195 PNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 238
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 144
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D
Sbjct: 145 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 153
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D
Sbjct: 154 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 37/210 (17%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFG------LEKPHEI--ALGTA 256
LLG C++ G ++ E+ G+L ++ SK N+ + L H I + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
+G+E+L + + H D+ NILL + K+ DFGLA+ K+ D+V D R +
Sbjct: 155 KGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
++APE I T+ +SDV+ FG++L E+
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 153 ILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN--- 205
+L+ IA T +G+G FG V++G+ G +AVK+ E S F E
Sbjct: 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM 92
Query: 206 ----ELLGLCSEGFKR-------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG 254
+LG + K LV +Y +GSL F N+ T +E ++AL
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALS 147
Query: 255 TARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
TA G+ +LH I H D+K NIL+ N ++D GLA H D + I+
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 310 DTR--GTIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 347
GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 144
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D
Sbjct: 145 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 129
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ +F + + I + AP
Sbjct: 130 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 187 ESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 45/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ F KP ++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE---FVPYKPEDLYKDFLTLEHLIXY 153
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L + + H D+ NILL + K+ DFGLA+ K+ D V D
Sbjct: 154 SFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 190
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D
Sbjct: 191 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 248 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 280
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 36/220 (16%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME--NSKFSAEEFINE---- 206
E+ A +G G FG V G+L +A+K ++ ++ +F+ E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ ++ +V EYM NGSLD F +++ Q F + + + G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 128
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG--- 313
G++YL D+ +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 183
Query: 314 TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 184 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 220
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 58/285 (20%)
Query: 169 LGQGGFGSVYKGQLH-TGR---LIAVKMME--NSKFSAEEFINE--------------LL 208
+G G FG V G+L G+ +A+K ++ ++ +F+ E L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ + G +V E+M NG+LD F +++ GQ F + + + G A G+ YL D+
Sbjct: 111 GVVTRGKPVMIVIEFMENGALD--AFLRKHDGQ-FTVIQLVGMLRGIAAGMRYL---ADM 164
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG---TIGYLAPELISR 325
+H D+ NIL++ N + KVSDFGL++ E+D ++ T G + + APE I
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAI-- 220
Query: 326 NFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
+ + SDV+ +G+V+ E M+ G R P W D N+ D+ ++ +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGER--------------PYW--DMSNQ--DV-IKAI 261
Query: 385 TEIESMIARKLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSI 424
E + A C GL C Q + A+RP +++ +L+ I
Sbjct: 262 EEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 35/235 (14%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H Y QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTYEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V E M NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 37/208 (17%)
Query: 165 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMMENS------KFSAE---------EFI 204
+ +LG+G FGSV + +TG L+AVK +++S F E +FI
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 205 NELLGLCSEGFKRA---LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGT--ARGI 259
+ G+ S G R LV EY+P+G L F + ++ + L+ + + +G+
Sbjct: 74 VKYRGV-SYGPGRQSLRLVMEYLPSGCL--RDFLQRHRAR---LDASRLLLYSSQICKGM 127
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYL 318
EYL G C+ H D+ NIL++ K++DFGLAK P + D+ + + + I +
Sbjct: 128 EYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE +S N S +SDV+ FG+VL E+
Sbjct: 185 APESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 153
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V D
Sbjct: 154 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 126/298 (42%), Gaps = 61/298 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL---IAVKMMEN--SKFSAEEFINELLGLCSEGFK--- 216
F +G+G FG V K ++ L A+K M+ SK +F EL LC G
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 217 ---------RALVY---EYMPNGSL------------DRHIFSKENKGQTFGLEKPHEIA 252
R +Y EY P+G+L D + T ++ A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR 312
ARG++YL +H D+ NIL+ N++ K++DFGL++ + +V + R
Sbjct: 139 ADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 313 GTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVY 370
+ ++A E S N+ + SDV+ +G++L E+ GG M +Y
Sbjct: 193 LPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LY 241
Query: 371 DQLNKGGDLE--LRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
++L +G LE L E+ ++ + C + K +RPS ++L L +++
Sbjct: 242 EKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSFAQILVSLNRMLEE 291
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 37/208 (17%)
Query: 165 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMMENS------KFSAE---------EFI 204
+ +LG+G FGSV + +TG L+AVK +++S F E +FI
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 205 NELLGLCSEGFKRA---LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGT--ARGI 259
+ G+ S G R LV EY+P+G L F + ++ + L+ + + +G+
Sbjct: 87 VKYRGV-SYGPGRQSLRLVMEYLPSGCL--RDFLQRHRAR---LDASRLLLYSSQICKGM 140
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYL 318
EYL G C+ H D+ NIL++ K++DFGLAK P + D+ + + + I +
Sbjct: 141 EYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE +S N S +SDV+ FG+VL E+
Sbjct: 198 APESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY--KTPEDLYKDFLTLEHLICY 153
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V D
Sbjct: 154 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 37/208 (17%)
Query: 165 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMMENS------KFSAE---------EFI 204
+ +LG+G FGSV + +TG L+AVK +++S F E +FI
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 205 NELLGLCSEGFKRA---LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGT--ARGI 259
+ G+ S G R LV EY+P+G L F + ++ + L+ + + +G+
Sbjct: 75 VKYRGV-SYGPGRQSLRLVMEYLPSGCL--RDFLQRHRAR---LDASRLLLYSSQICKGM 128
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYL 318
EYL G C+ H D+ NIL++ K++DFGLAK P + D+ + + + I +
Sbjct: 129 EYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE +S N S +SDV+ FG+VL E+
Sbjct: 186 APESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 144
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V D
Sbjct: 145 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 144
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V D
Sbjct: 145 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 202 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 58/236 (24%)
Query: 150 VDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--- 206
+DN+ L E+I G+G +G+VYKG L R +AVK+ S + + FINE
Sbjct: 12 LDNLKLLELI----------GRGRYGAVYKGSLDE-RPVAVKVF--SFANRQNFINEKNI 58
Query: 207 --------------LLG---LCSEG-FKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKP 248
++G + ++G + LV EY PNGSL +++ T
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSS 113
Query: 249 HEIALGTARGIEYLHNGC------DVCILHFDIKPHNILLDHNFIPKVSDFGLAK----- 297
+A RG+ YLH I H D+ N+L+ ++ +SDFGL+
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 298 --FHPKENDFVSISDTRGTIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEM 346
P E D +IS+ GTI Y+APE++ R+ + + D+Y G++ E+
Sbjct: 174 RLVRPGEEDNAAISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 40/210 (19%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRA--------- 218
+G G +G VYKG+ + TG+L A+K+M+ + EE E+ L R
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 219 ------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LV E+ GS+ I K KG T E I RG+ +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPEL 322
++H DIK N+LL N K+ DFG L + + N F+ GT ++APE+
Sbjct: 150 ---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI------GTPYWMAPEV 200
Query: 323 ISRNF---GTVSCKSDVYGFGMVLLEMAGG 349
I+ + T KSD++ G+ +EMA G
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 169 LGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAEEF-----------------IN 205
LG+G FG V + + T R +AVKM++ +E +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 206 ELLGLCSE-GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI------------- 251
LLG C++ G ++ E+ G+L ++ SK N+ + + P ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV-APEDLYKDFLTLEHLICY 153
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
+ A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V D
Sbjct: 154 SFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 211 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 126/298 (42%), Gaps = 61/298 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL---IAVKMMEN--SKFSAEEFINELLGLCSEGFK--- 216
F +G+G FG V K ++ L A+K M+ SK +F EL LC G
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 217 ---------RALVY---EYMPNGSL------------DRHIFSKENKGQTFGLEKPHEIA 252
R +Y EY P+G+L D + T ++ A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR 312
ARG++YL +H D+ NIL+ N++ K++DFGL++ + +V + R
Sbjct: 149 ADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 313 GTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVY 370
+ ++A E S N+ + SDV+ +G++L E+ GG M +Y
Sbjct: 203 LPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LY 251
Query: 371 DQLNKGGDLE--LRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
++L +G LE L E+ ++ + C + K +RPS ++L L +++
Sbjct: 252 EKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSFAQILVSLNRMLEE 301
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------ELLGLCSEGF-- 215
+G+G +G V++G H G +AVK+ E S F E N +LG +
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 216 -----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-----NG 265
+ L+ Y +GSL + + QT +A+ A G+ +LH
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--GTIGYLAPELI 323
I H D K N+L+ N ++D GLA H + +D++ I + GT Y+APE++
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 324 SRNFGTVSCKS----DVYGFGMVLLEMA 347
T +S D++ FG+VL E+A
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 37/236 (15%)
Query: 141 HKYRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME-- 194
H + QTV E+ A +G G FG V G+L +A+K ++
Sbjct: 26 HTFEDPTQTVHE-FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 195 NSKFSAEEFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ +F+ E L G+ ++ +V E M NGSLD F +++
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDA 142
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
Q F + + + G A G++YL D+ +H D+ NIL++ N + KVSDFGL++
Sbjct: 143 Q-FTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL- 197
Query: 301 KENDFVSISDTRG---TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
E+D + TRG I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 198 -EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 249
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 159 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------EL 207
IA T +G+G FG V++G+ G +AVK+ E S F E +
Sbjct: 2 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 60
Query: 208 LGLCSEGFKR-------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
LG + K LV +Y +GSL F N+ T +E ++AL TA G+
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTASGLA 115
Query: 261 YLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--G 313
+LH I H D+K NIL+ N ++D GLA H D + I+ G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 314 TIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 347
T Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 37/208 (17%)
Query: 165 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMMENS------KFSAE---------EFI 204
+ +LG+G FGSV + +TG L+AVK +++S F E +FI
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 205 NELLGLCSEGFKRA---LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGT--ARGI 259
+ G+ S G R LV EY+P+G L F + ++ + L+ + + +G+
Sbjct: 71 VKYRGV-SYGPGRPELRLVMEYLPSGCL--RDFLQRHRAR---LDASRLLLYSSQICKGM 124
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYL 318
EYL G C+ H D+ NIL++ K++DFGLAK P + D + + + I +
Sbjct: 125 EYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE +S N S +SDV+ FG+VL E+
Sbjct: 182 APESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 39/212 (18%)
Query: 168 KLGQGGFGSVYKGQLHT------GRLIAVKMMENSKFSAEE---------------FINE 206
+LG+G FG V+ + H L+AVK ++ + SA + I
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQ-----------TFGLEKPHEIALGT 255
G+C+EG +V+EYM +G L+R + S + GL + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTI 315
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 316 GYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 202 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 230
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 159 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------EL 207
IA T +G+G FG V++G+ G +AVK+ E S F E +
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 59
Query: 208 LGLCSEGFKR-------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
LG + K LV +Y +GSL F N+ T +E ++AL TA G+
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTASGLA 114
Query: 261 YLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--G 313
+LH I H D+K NIL+ N ++D GLA H D + I+ G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 314 TIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 347
T Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 159 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------EL 207
IA T +G+G FG V++G+ G +AVK+ E S F E +
Sbjct: 7 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 65
Query: 208 LGLCSEGFKR-------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
LG + K LV +Y +GSL F N+ T +E ++AL TA G+
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTASGLA 120
Query: 261 YLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--G 313
+LH I H D+K NIL+ N ++D GLA H D + I+ G
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 314 TIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 347
T Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 218
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 39/212 (18%)
Query: 168 KLGQGGFGSVYKGQLHT------GRLIAVKMMENSKFSAEE---------------FINE 206
+LG+G FG V+ + H L+AVK ++ + SA + I
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQ-----------TFGLEKPHEIALGT 255
G+C+EG +V+EYM +G L+R + S + GL + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTI 315
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 316 GYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 196 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 224
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 159 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------EL 207
IA T +G+G FG V++G+ G +AVK+ E S F E +
Sbjct: 4 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 62
Query: 208 LGLCSEGFKR-------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
LG + K LV +Y +GSL F N+ T +E ++AL TA G+
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTASGLA 117
Query: 261 YLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--G 313
+LH I H D+K NIL+ N ++D GLA H D + I+ G
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 314 TIGYLAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 347
T Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 34/203 (16%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINEL--LGLCSEG--------- 214
KLG+G +GSVYK TG+++A+K + + +E I E+ + C
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 215 FKRA---LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
FK +V EY GS+ I NK T ++ I T +G+EYLH + +
Sbjct: 94 FKNTDLWIVMEYCGAGSVS-DIIRLRNK--TLTEDEIATILQSTLKGLEYLHF---MRKI 147
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELISRNF 327
H DIK NILL+ K++DFG+A K N + GT ++APE+I +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI------GTPFWMAPEVI-QEI 200
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
G +C +D++ G+ +EMA G+
Sbjct: 201 G-YNCVADIWSLGITAIEMAEGK 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 86/200 (43%), Gaps = 33/200 (16%)
Query: 169 LGQGGFGSVYK-GQLHTGRLIAVKMMENS------------------KFSAEEFINELLG 209
LG G FG V+ H GR A+K+++ FI + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + ++ +Y+ G L FS K Q F A +EYLH+
Sbjct: 74 TFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
I++ D+KP NILLD N K++DFG AK+ P + GT Y+APE++S
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYN 181
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
S D + FG+++ EM G
Sbjct: 182 KSI--DWWSFGILIYEMLAG 199
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
G+C +R L+ EY+P GSL ++ + + L + +G+EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL 129
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPE 321
G I H D+ NIL+++ K+ DFGL K P++ + + + I + APE
Sbjct: 130 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 322 LISRNFGTVSCKSDVYGFGMVLLEM 346
++ + S SDV+ FG+VL E+
Sbjct: 187 SLTES--KFSVASDVWSFGVVLYEL 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 129
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 130 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 187 ESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 39/212 (18%)
Query: 168 KLGQGGFGSVYKGQLHT------GRLIAVKMMENSKFSAEE---------------FINE 206
+LG+G FG V+ + H L+AVK ++ + SA + I
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQ-----------TFGLEKPHEIALGT 255
G+C+EG +V+EYM +G L+R + S + GL + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTI 315
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 316 GYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 225 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 253
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 133
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 134 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 191 ESLTES--KFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 127
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 128 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 185 ESLTES--KFSVASDVWSFGVVLYEL 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 129
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 130 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 187 ESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 160
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 161 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 218 ESLTES--KFSVASDVWSFGVVLYEL 241
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 132
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 133 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 190 ESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
G+C +R L+ EY+P GSL ++ + + L + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEYL 133
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPE 321
G I H D+ NIL+++ K+ DFGL K P++ + + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 322 LISRNFGTVSCKSDVYGFGMVLLEM 346
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 115/233 (49%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 36 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 93
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 94 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 151
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + V H D+ N +LD F KV+DFGLA+
Sbjct: 152 KDLIGFGLQ--------VAKGMKYLASKKFV---HRDLAARNCMLDEKFTVKVADFGLAR 200
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 201 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 249
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 134
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 135 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 192 ESLTES--KFSVASDVWSFGVVLYEL 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 135
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 136 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 193 ESLTES--KFSVASDVWSFGVVLYEL 216
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 17 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 132
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + +H D+ N +LD F KV+DFGLA+
Sbjct: 133 KDLIGFGLQ--------VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 182 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 9 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 66
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 67 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 124
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + +H D+ N +LD F KV+DFGLA+
Sbjct: 125 KDLIGFGLQ--------VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR 173
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 174 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 222
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 14 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 71
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 72 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 129
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + +H D+ N +LD F KV+DFGLA+
Sbjct: 130 KDLIGFGLQ--------VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR 178
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 179 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 227
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 136
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 137 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 194 ESLTES--KFSVASDVWSFGVVLYEL 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 147
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 148 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 205 ESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 36/220 (16%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMME--NSKFSAEEFINE---- 206
E+ A +G G FG V G+L +A+K ++ ++ +F+ E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 207 ----------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
L G+ ++ +V E M NGSLD F +++ Q F + + + G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 128
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG--- 313
G++YL D+ +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 183
Query: 314 TIGYLAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRR 351
I + +PE I+ R F + SDV+ +G+VL E M+ G R
Sbjct: 184 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGER 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 61/298 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL---IAVKMMEN--SKFSAEEFINELLGLCSEGFK--- 216
F +G+G FG V K ++ L A+K M+ SK +F EL LC G
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 217 ---------RALVY---EYMPNGSL------------DRHIFSKENKGQTFGLEKPHEIA 252
R +Y EY P+G+L D + T ++ A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR 312
ARG++YL +H ++ NIL+ N++ K++DFGL++ + +V + R
Sbjct: 146 ADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 313 GTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVY 370
+ ++A E S N+ + SDV+ +G++L E+ GG M +Y
Sbjct: 200 LPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LY 248
Query: 371 DQLNKGGDLE--LRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
++L +G LE L E+ ++ + C + K +RPS ++L L +++
Sbjct: 249 EKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSFAQILVSLNRMLEE 298
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 130
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H ++ NIL+++ K+ DFGL K P++ ++ + + I + AP
Sbjct: 131 L--GTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 188 ESLTES--KFSVASDVWSFGVVLYEL 211
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 114/233 (48%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 17 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 132
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL +H D+ N +LD F KV+DFGLA+
Sbjct: 133 KDLIGFGLQ--------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 182 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 16 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 73
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 131
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + +H D+ N +LD F KV+DFGLA+
Sbjct: 132 KDLIGFGLQ--------VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 181 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 229
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 35 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 92
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 93 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 150
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + +H D+ N +LD F KV+DFGLA+
Sbjct: 151 KDLIGFGLQ--------VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR 199
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 200 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 248
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ EY+P GSL ++ KE L+ +I +G+EY
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEY 147
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 148 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 205 ESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 114/233 (48%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 15 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 72
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 130
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL +H D+ N +LD F KV+DFGLA+
Sbjct: 131 KDLIGFGLQ--------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 180 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 114/233 (48%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 12 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 69
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 127
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL +H D+ N +LD F KV+DFGLA+
Sbjct: 128 KDLIGFGLQ--------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++ S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 177 -DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 49/226 (21%)
Query: 164 HFTHKLGQGGFGSVYKGQLH----TGRLI--AVKMMENSKFSAE---------------- 201
F LG G FG V + TG I AVKM++ S+E
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE---------- 250
E I LLG C+ L++EY G L ++ SK K +E ++
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 251 ---------IALGTARGIEYLH-NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
A A+G+E+L C +H D+ N+L+ H + K+ DFGLA+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 301 KENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
++++V + R + ++APE + G + KSDV+ +G++L E+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEI 267
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 15 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 72
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 130
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 131 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE D V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 180 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 165 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMMENS------KFSAE-EFINELL---- 208
F +LG+G FGSV Q +TG ++AVK +++S F E E + L
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 209 ----GLCSEGFKR--ALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEY 261
G+C +R L+ E++P GSL ++ KE L+ +I +G+EY
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQIC----KGMEY 132
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAP 320
L G I H D+ NIL+++ K+ DFGL K P++ + + + I + AP
Sbjct: 133 L--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEM 346
E ++ + S SDV+ FG+VL E+
Sbjct: 190 ESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 41/208 (19%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMM--ENSKFSA---EEF----------INELLGLCS 212
LG+G +G VY G+ L IA+K + +S++S EE I + LG S
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 213 EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG-----TARGIEYLHNGCD 267
E + E +P GSL + SK +G K +E +G G++YLH D
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSK------WGPLKDNEQTIGFYTKQILEGLKYLH---D 140
Query: 268 VCILHFDIKPHNILLD-HNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPEL 322
I+H DIK N+L++ ++ + K+SDFG LA +P F GT+ Y+APE+
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEI 194
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
I + +D++ G ++EMA G+
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 76 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 133
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 134 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 191
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 192 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE D V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 17 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 132
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 133 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE D V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 16 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 73
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 131
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G++YL + +H D+ N +LD F KV+DFGLA+
Sbjct: 132 KDLIGFGLQ--------VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 181 DMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 17 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 132
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 133 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE D V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 22 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 79
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 137
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 138 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE D V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 187 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 42/214 (19%)
Query: 168 KLGQGGFGSVYKGQLHT------GRLIAVKMMENSKFSAE---------------EFINE 206
+LG+G FG V+ + + L+AVK +++ +A E I +
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFS-------------KENKGQTFGLEKPHEIAL 253
G+C +G +V+EYM +G L++ + + ++ KG+ GL + IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLHIAS 140
Query: 254 GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
A G+ YL +H D+ N L+ N + K+ DFG+++ + + T
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
I ++ PE ++ R F T +SDV+ FG++L E+
Sbjct: 198 PIRWMPPESIMYRKFTT---ESDVWSFGVILWEI 228
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 50/232 (21%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 18 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 75
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 133
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 134 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 298 -FHPKENDFV-SISDTRGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ KE D V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 183 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 231
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 9 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 117
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 175 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 155 LPEIIAVTNH----FTHKLGQGGFGSVYKGQLHT-GRLIAVKMME-------NSKFSAEE 202
+P+ V NH ++G+G FG V+ G+L L+AVK +KF E
Sbjct: 104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 203 FINE---------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIAL 253
I + L+G+C++ +V E + G + +G ++ ++
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVG 220
Query: 254 GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISD--- 310
A G+EYL + C CI H D+ N L+ + K+SDFG+++ +E D V +
Sbjct: 221 DAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGL 274
Query: 311 TRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLE 345
+ + + APE + N+G S +SDV+ FG++L E
Sbjct: 275 RQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 114/233 (48%), Gaps = 52/233 (22%)
Query: 147 MQTVDNILL-PEIIAVTNHFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMM-------E 194
+Q V ++++ P + V HF +G+G FG VY G L + G+ I AVK + E
Sbjct: 18 VQAVQHVVIGPSSLIV--HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 75
Query: 195 NSKFSAEEFINE---------LLGLC--SEGFKRALVYEYMPNGSLDRHIFSKENKGQT- 242
S+F E I + LLG+C SEG +V YM +G L R+ E T
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDL-RNFIRNETHNPTV 133
Query: 243 -----FGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 297
FGL+ A+G+++L +H D+ N +LD F KV+DFGLA+
Sbjct: 134 KDLIGFGLQ--------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 298 FHPKENDFVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ +F S+ + G + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 183 -DMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 231
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 41/208 (19%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMM--ENSKFSA---EEF----------INELLGLCS 212
LG+G +G VY G+ L IA+K + +S++S EE I + LG S
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 213 EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG-----TARGIEYLHNGCD 267
E + E +P GSL + SK +G K +E +G G++YLH D
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSK------WGPLKDNEQTIGFYTKQILEGLKYLH---D 126
Query: 268 VCILHFDIKPHNILLD-HNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPEL 322
I+H DIK N+L++ ++ + K+SDFG LA +P F GT+ Y+APE+
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEI 180
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
I + +D++ G ++EMA G+
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 155 LPEIIAVTNH----FTHKLGQGGFGSVYKGQLHT-GRLIAVKMME-------NSKFSAEE 202
+P+ V NH ++G+G FG V+ G+L L+AVK +KF E
Sbjct: 104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 203 FINE---------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIAL 253
I + L+G+C++ +V E + G + +G ++ ++
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVG 220
Query: 254 GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISD--- 310
A G+EYL + C CI H D+ N L+ + K+SDFG+++ +E D V +
Sbjct: 221 DAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGL 274
Query: 311 TRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLE 345
+ + + APE + N+G S +SDV+ FG++L E
Sbjct: 275 RQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN +L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 119
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G +G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 44/230 (19%)
Query: 168 KLGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + HTG+ +AVK M+ K E + NE++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ E+ + L R + YLHN +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIATVCLSVLRALSYLHNQG---V 162
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL + K+SDFG ++K PK V GT ++APE+ISR
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISRL 216
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR----RNSNMNATRSSKAYFPSWVYD 371
+GT + D++ G++++EM G + A R + P V D
Sbjct: 217 PYGT---EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 153 ILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN--- 205
+L+ IA ++G+G +G V+ G+ G +AVK+ E S F E
Sbjct: 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL 87
Query: 206 ----ELLGLCSEGFKRA-------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG 254
+LG + K L+ +Y NGSL ++ K T + ++A
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYS 142
Query: 255 TARGIEYLHNGC-----DVCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSI 308
+ G+ +LH I H D+K NIL+ N ++D GLA KF N+
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 309 SDTR-GTIGYLAPEL----ISRNFGTVSCKSDVYGFGMVLLEMA 347
+TR GT Y+ PE+ ++RN +D+Y FG++L E+A
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++E G + H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 30/199 (15%)
Query: 169 LGQGGFGSVYKG-QLHTGR----LIAVKMM-ENSKFSAEE---------------FINEL 207
LG G FG+VYKG + G +A+K++ EN+ A + +++ L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
LG+C + LV + MP G L H+ +EN+G+ G + + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHV--RENRGR-LGSQDLLNWCMQIAKGMSYLE---D 137
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
V ++H D+ N+L+ K++DFGLA+ + + I ++A E I R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR- 196
Query: 328 GTVSCKSDVYGFGMVLLEM 346
+ +SDV+ +G+ + E+
Sbjct: 197 -RFTHQSDVWSYGVTVWEL 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINE----------------LLGL 210
LG+G F +VYK + +T +++A+K ++ + A++ IN ++GL
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 211 CSE-GFKR--ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIA--LGTARGIEYLHNG 265
G K +LV+++M D + K+N + L H A L T +G+EYLH
Sbjct: 78 LDAFGHKSNISLVFDFM---ETDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPELI- 323
ILH D+KP+N+LLD N + K++DFGLAK F + TR Y APEL+
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAPELLF 185
Query: 324 -SRNFGTVSCKSDVYGFGMVLLEM 346
+R +G D++ G +L E+
Sbjct: 186 GARMYGV---GVDMWAVGCILAEL 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 164 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMMENSKFSAE---------------- 201
F LG G FG V + G+ +AVKM++++ + E
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSK------ENKGQTFGLEKPHEIALG 254
E I LLG C+ G ++ EY G L + K + G+ L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++ + R
Sbjct: 161 VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++APE I TV +SDV+ +G++L E+
Sbjct: 218 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 247
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 38/216 (17%)
Query: 164 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMMENSKFSAE---------------- 201
F LG G FG V + G+ +AVKM++++ + E
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
E I LLG C+ G ++ EY G L + K + + IA TA +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTASTRD 165
Query: 261 YLHNGCDVC----------ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISD 310
LH V +H D+ N+LL + + K+ DFGLA+ +++++ +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 311 TRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 32/201 (15%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFI-NELLGLCSE----------- 213
K+GQG G+VY + TG+ +A++ M + +E I NE+L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 214 ---GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
G + +V EY+ GSL D + ++GQ + + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHSNQ--- 136
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H DIK NILL + K++DFG A+ P+++ S+ GT ++APE+++R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTRK-- 191
Query: 329 TVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ +EM G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 164 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMMENSKFSAE---------------- 201
F LG G FG V + G+ +AVKM++++ + E
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSK------ENKGQTFGLEKPHEIALG 254
E I LLG C+ G ++ EY G L + K + G+ L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++ + R
Sbjct: 169 VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++APE I TV +SDV+ +G++L E+
Sbjct: 226 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 255
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 140 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 197 APE--SLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
ARG+E+L + CI H D+ NILL N + K+ DFGLA+ K D+V DTR
Sbjct: 208 VARGMEFLSS--RKCI-HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 315 IGYLAPELISRNFGTV-SCKSDVYGFGMVLLEM 346
+ ++APE I F + S KSDV+ +G++L E+
Sbjct: 265 LKWMAPESI---FDKIYSTKSDVWSYGVLLWEI 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 155 LPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGR-LIAVK------------MMEN-SKFSA 200
LP + + ++G+GGFG V+KG+L + ++A+K M+E +F
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 201 EEFIN---------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI 251
E FI +L GL + +V E++P G L + +K +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFV 306
L A GIEY+ N + I+H D++ NI L D N KV+DFGL+ +
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVH 181
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
S+S G ++APE I + + K+D Y F M+L + G
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 26/200 (13%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEE-----------------FINELLG 209
+LG+G +G V K + + +G+++AVK + + S E+ F G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ E M + SLD+ +KGQT + +IA+ + +E+LH+ +
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 174
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR--NF 327
++H D+KP N+L++ K+ DFG++ + D V+ + G Y+APE I+ N
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 328 GTVSCKSDVYGFGMVLLEMA 347
S KSD++ G+ ++E+A
Sbjct: 232 KGYSVKSDIWSLGITMIELA 251
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAE----------------EFINELLGLC 211
+G GGF V + TG ++A+K+M+ + ++ + I +L +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
K +V EY P G L +I S++ + E+ + + Y+H+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSE----EETRVVFRQIVSAVAYVHSQG---YA 130
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+KP N+L D K+ DFGL PK N + G++ Y APELI + +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELI-QGKSYLG 188
Query: 332 CKSDVYGFGMVLLEMAGG 349
++DV+ G++L + G
Sbjct: 189 SEADVWSMGILLYVLMCG 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 165 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMMENSK-------FSAEEFINELL----- 208
LG+G G V QL R+ +AVK+++ + E IN++L
Sbjct: 10 LVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 209 ----GLCSEGFKRALVYEYMPNGSL-DR---HIFSKENKGQTFGLEKPHEIALGTARGIE 260
G EG + L EY G L DR I E Q F H++ G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF----HQLMAGVV---- 118
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 30/199 (15%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAV----KMMEN----SKFSA------------EEFINEL 207
LG G FG+V+KG + G I + K++E+ F A I L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
LGLC G LV +Y+P GSL H+ ++++G G + + A+G+ YL +
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLE---E 133
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
++H ++ N+LL +V+DFG+A P ++ + S+ + I ++A E I +F
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HF 191
Query: 328 GTVSCKSDVYGFGMVLLEM 346
G + +SDV+ +G+ + E+
Sbjct: 192 GKYTHQSDVWSYGVTVWEL 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 30/199 (15%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAV----KMMEN----SKFSA------------EEFINEL 207
LG G FG+V+KG + G I + K++E+ F A I L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
LGLC G LV +Y+P GSL H+ ++++G G + + A+G+ YL +
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLE---E 151
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
++H ++ N+LL +V+DFG+A P ++ + S+ + I ++A E I +F
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HF 209
Query: 328 GTVSCKSDVYGFGMVLLEM 346
G + +SDV+ +G+ + E+
Sbjct: 210 GKYTHQSDVWSYGVTVWEL 228
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 164 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMMENSKFSAE---------------- 201
F LG G FG V + G+ +AVKM++++ + E
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH----------- 249
E I LLG C+ G ++ EY G L + K G + H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 250 -EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 308
+ A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 169 LHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G F H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + ++
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFI-NELLGLCSE----------- 213
K+GQG G+VY + TG+ +A++ M + +E I NE+L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 214 ---GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
G + +V EY+ GSL D + ++GQ + + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHSNQ--- 136
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRK-- 191
Query: 329 TVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ +EM G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFI-NELLGLCSE----------- 213
K+GQG G+VY + TG+ +A++ M + +E I NE+L +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 214 ---GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
G + +V EY+ GSL D + ++GQ + + +E+LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHSNQ--- 137
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRK-- 192
Query: 329 TVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ +EM G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 42/210 (20%)
Query: 170 GQGGFGSVYKGQLHTGRLIAVKM---MENSKFSAEEFINELLGLCSEGF-------KRA- 218
+G FG V+K QL +AVK+ + + E + L G+ E KR
Sbjct: 33 ARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 219 -------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-------N 264
L+ + GSL + K + IA ARG+ YLH +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIG---YLAP 320
G I H DIK N+LL +N ++DFGLA KF + S DT G +G Y+AP
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK----SAGDTHGQVGTRRYMAP 202
Query: 321 ELI--SRNFGTVS-CKSDVYGFGMVLLEMA 347
E++ + NF + + D+Y G+VL E+A
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 142 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 199 APE--SLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFI-NELLGLCSE----------- 213
K+GQG G+VY + TG+ +A++ M + +E I NE+L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 214 ---GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
G + +V EY+ GSL D + ++GQ + + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHSNQ--- 136
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRK-- 191
Query: 329 TVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ +EM G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLG-LCSE 213
+G+G FG V G + G +AVK ++N +A+ F+ E LLG + E
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL ++ S+ G + + +L +EYL +H
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPELISRNFGTVSC 332
D+ N+L+ + + KVSDFGL K + S DT + + + APE + S
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREK--KFST 178
Query: 333 KSDVYGFGMVLLEM 346
KSDV+ FG++L E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 31/196 (15%)
Query: 167 HKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLG-LC 211
+G+G FG V G + G +AVK ++N +A+ F+ E LLG +
Sbjct: 18 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
E +V EYM GSL ++ S+ G + + +L +EYL +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPELISRNFGTV 330
H D+ N+L+ + + KVSDFGL K + S DT + + + APE +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALRE--AAF 182
Query: 331 SCKSDVYGFGMVLLEM 346
S KSDV+ FG++L E+
Sbjct: 183 STKSDVWSFGILLWEI 198
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++ H D+ I+H DIKP NIL+D N K+ DFG+AK E + GT+ Y
Sbjct: 123 GIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA-LSETSLTQTNHVLGTVQY 178
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+PE ++ T C +D+Y G+VL EM G
Sbjct: 179 FSPEQ-AKGEATDEC-TDIYSIGIVLYEMLVGE 209
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 145 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 202 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 234
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 149 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 206 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 238
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 36/202 (17%)
Query: 168 KLGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI-NELLGL-------CSEGFKRA 218
K+G+G G V + H+GR +AVKMM+ K E + NE++ + E +K
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 219 LV-------YEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
LV E++ G+L I S+ + E+ + + + YLH ++
Sbjct: 112 LVGEELWVLMEFLQGGALT-DIVSQVRLNE----EQIATVCEAVLQALAYLHAQG---VI 163
Query: 272 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
H DIK +ILL + K+SDFG ++K PK V GT ++APE+ISR+
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSL 217
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
+ + D++ G++++EM G
Sbjct: 218 --YATEVDIWSLGIMVIEMVDG 237
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEE-----------------FINELLG 209
+LG+G +G V K + + +G+++AVK + + S E+ F G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ E M + SLD+ +KGQT + +IA+ + +E+LH+ +
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 130
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR--NF 327
++H D+KP N+L++ K+ DFG++ + D V+ G Y+APE I+ N
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 328 GTVSCKSDVYGFGMVLLEMA 347
S KSD++ G+ ++E+A
Sbjct: 188 KGYSVKSDIWSLGITMIELA 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLG-LCSE 213
+G+G FG V G + G +AVK ++N +A+ F+ E LLG + E
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL ++ S+ G + + +L +EYL +H
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPELISRNFGTVSC 332
D+ N+L+ + + KVSDFGL K + S DT + + + APE + S
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREK--KFST 365
Query: 333 KSDVYGFGMVLLEM 346
KSDV+ FG++L E+
Sbjct: 366 KSDVWSFGILLWEI 379
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 148 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 205 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 237
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINE--------------LLG-LCSE 213
+G+G FG V G + G +AVK ++N +A+ F+ E LLG + E
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 214 GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
+V EYM GSL ++ S+ G + + +L +EYL +H
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 274 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPELISRNFGTVSC 332
D+ N+L+ + + KVSDFGL K + S DT + + + APE + S
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREK--KFST 193
Query: 333 KSDVYGFGMVLLEM 346
KSDV+ FG++L E+
Sbjct: 194 KSDVWSFGILLWEI 207
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 169 LGQGGFGSVYKGQLHT----GRLIAVKMMENSKFSAEEFIN-----ELLGLCSEGFKRAL 219
LGQG FG V+ + T G L A+K+++ + + + ++L + F L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 220 VYEYMPNGSL--------DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
Y + G L +F++ +K F E A G+++LH+ + I+
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS---LGII 152
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISDTRGTIGYLAPELISRNF 327
+ D+KP NILLD K++DFGL+K K F GT+ Y+APE+++R
Sbjct: 153 YRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC------GTVEYMAPEVVNRQ- 205
Query: 328 GTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 369
S +D + +G+++ EM G R M +K P ++
Sbjct: 206 -GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFL 253
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 134 VFLVFLIHKYRTTMQTVDNILLPEIIAVTNHFTHKL-GQGGFGSVYK-GQLHTGRLIAVK 191
VF F+ T N+ L + + + H++ G+GGFG VY + TG++ A+K
Sbjct: 160 VFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 219
Query: 192 MMENSKFSAEE----FINE--LLGLCSEGF---------------KRALVYEYMPNGSLD 230
++ + ++ +NE +L L S G K + + + M G L
Sbjct: 220 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 279
Query: 231 RHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 290
H+ ++ F A G+E++HN +++ D+KP NILLD + ++
Sbjct: 280 YHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 332
Query: 291 SDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
SD GLA K+ S+ GT GY+APE++ + S +D + G +L ++ G
Sbjct: 333 SDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGH 387
Query: 351 RNSNMNATR 359
+ T+
Sbjct: 388 SPFRQHKTK 396
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 134 VFLVFLIHKYRTTMQTVDNILLPEIIAVTNHFTHKL-GQGGFGSVYK-GQLHTGRLIAVK 191
VF F+ T N+ L + + + H++ G+GGFG VY + TG++ A+K
Sbjct: 161 VFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 192 MMENSKFSAEE----FINE--LLGLCSEGF---------------KRALVYEYMPNGSLD 230
++ + ++ +NE +L L S G K + + + M G L
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280
Query: 231 RHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 290
H+ ++ F A G+E++HN +++ D+KP NILLD + ++
Sbjct: 281 YHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 333
Query: 291 SDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
SD GLA K+ S+ GT GY+APE++ + S +D + G +L ++ G
Sbjct: 334 SDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGH 388
Query: 351 RNSNMNATR 359
+ T+
Sbjct: 389 SPFRQHKTK 397
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 134 VFLVFLIHKYRTTMQTVDNILLPEIIAVTNHFTHKL-GQGGFGSVYK-GQLHTGRLIAVK 191
VF F+ T N+ L + + + H++ G+GGFG VY + TG++ A+K
Sbjct: 161 VFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 192 MMENSKFSAEE----FINE--LLGLCSEGF---------------KRALVYEYMPNGSLD 230
++ + ++ +NE +L L S G K + + + M G L
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280
Query: 231 RHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 290
H+ ++ F A G+E++HN +++ D+KP NILLD + ++
Sbjct: 281 YHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 333
Query: 291 SDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
SD GLA K+ S+ GT GY+APE++ + S +D + G +L ++ G
Sbjct: 334 SDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGH 388
Query: 351 RNSNMNATR 359
+ T+
Sbjct: 389 SPFRQHKTK 397
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 209 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 266 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 134 VFLVFLIHKYRTTMQTVDNILLPEIIAVTNHFTHKL-GQGGFGSVYK-GQLHTGRLIAVK 191
VF F+ T N+ L + + + H++ G+GGFG VY + TG++ A+K
Sbjct: 161 VFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 192 MMENSKFSAEE----FINE--LLGLCSEGF---------------KRALVYEYMPNGSLD 230
++ + ++ +NE +L L S G K + + + M G L
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280
Query: 231 RHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 290
H+ ++ F A G+E++HN +++ D+KP NILLD + ++
Sbjct: 281 YHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 333
Query: 291 SDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
SD GLA K+ S+ GT GY+APE++ + S +D + G +L ++ G
Sbjct: 334 SDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGH 388
Query: 351 RNSNMNATR 359
+ T+
Sbjct: 389 SPFRQHKTK 397
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 168 KLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINE----LLGLCSEGFKRALVYE 222
++G+G FG VYKG HT ++A+K+++ + E + +L C +
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 223 YMPNGSLDRHIFSKENKGQTFGLEKP---HEIALGTA-----RGIEYLHNGCDVCILHFD 274
Y+ + L I G L KP E + T +G++YLH+ + H D
Sbjct: 86 YLKSTKL-WIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKI---HRD 141
Query: 275 IKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
IK N+LL K++DFG+A K N FV GT ++APE+I ++
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVIKQS--AY 193
Query: 331 SCKSDVYGFGMVLLEMAGGR-RNSNMNATR 359
K+D++ G+ +E+A G NS+++ R
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMR 223
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 141 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 198 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 230
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 197 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 254 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 286
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H ++ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 143 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 167 HKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAE--EFINE------------ 206
+LGQG FG VY+G +AVK + S E EF+NE
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 207 --LLGLCSEGFKRALVYEYMPNGSLDRHIFS-----KENKGQTF-GLEKPHEIALGTARG 258
LLG+ S+G +V E M +G L ++ S + N G+ L++ ++A A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+ YL+ +H ++ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 144 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE S G + SD++ FG+VL E+
Sbjct: 201 APE--SLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 219 LVYEYMPNGSL---DRHIFSKENKGQTF-GLEKPHEIALGTARGIEYLHNGCDVCILHFD 274
++YEYM N S+ D + F + F ++ I Y+HN ++C H D
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC--HRD 177
Query: 275 IKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
+KP NIL+D N K+SDFG +++ + I +RGT ++ PE S K
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKV 233
Query: 335 DVYGFGMVLLEM 346
D++ G+ L M
Sbjct: 234 DIWSLGICLYVM 245
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 164 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMMENSKFSAE---------------- 201
F LG G FG V + G+ +AVKM++++ + E
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
E I LLG C+ G ++ EY G L + K + + IA T +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTLSTRD 165
Query: 261 YLHNGCDVC----------ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISD 310
LH V +H D+ N+LL + + K+ DFGLA+ +++++ +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 311 TRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + +++DFGLA+ + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + + +AVKM+++ + + I+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH------------EI 251
LLG C++ ++ EY G+L ++ ++ G + H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + ++
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 39/223 (17%)
Query: 155 LPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGR-LIAVK------------MMEN-SKFSA 200
LP + + ++G+GGFG V+KG+L + ++A+K M+E +F
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 201 EEFIN---------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI 251
E FI +L GL + +V E++P G L + +K +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFV 306
L A GIEY+ N + I+H D++ NI L D N KV+DF L+ +
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVH 181
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
S+S G ++APE I + + K+D Y F M+L + G
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 40/216 (18%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSA----------------EEFINELLG 209
++G+G FG V+KG T +++A+K+++ + ++ + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 210 LCSEGFKRALVYEYMPNGS-LDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+G K ++ EY+ GS LD ++ Q + K EI +G++YLH+ +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK--EIL----KGLDYLHSEKKI 142
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELIS 324
H DIK N+LL K++DFG+A K N FV GT ++APE+I
Sbjct: 143 ---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEVIQ 193
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGR-RNSNMNATR 359
++ K+D++ G+ +E+A G NS+M+ R
Sbjct: 194 QS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 150 TYQLARGMEYL--ASQKCI-HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 207 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 39/223 (17%)
Query: 155 LPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGR-LIAVK------------MMEN-SKFSA 200
LP + + ++G+GGFG V+KG+L + ++A+K M+E +F
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 201 EEFIN---------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI 251
E FI +L GL + +V E++P G L + +K +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRL 127
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFV 306
L A GIEY+ N + I+H D++ NI L D N KV+DFG + +
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVH 181
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
S+S G ++APE I + + K+D Y F M+L + G
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFIN------------------ELLG 209
LG+G F VY+ + +HTG +A+KM++ + EL
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ LV E NG ++R++ +N+ + F + G+ YLH+
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSHG--- 132
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKF--HPKENDFVSISDTRGTIGYLAPELISRNF 327
ILH D+ N+LL N K++DFGLA P E + GT Y++PE+ +R+
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC----GTPNYISPEIATRS- 187
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
+SDV+ G + + GR
Sbjct: 188 -AHGLESDVWSLGCMFYTLLIGR 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEE----FINE--LLGLCSEGFKRALVY 221
LG+GGFG V Q+ TG++ A K +E + + +NE +L + F +L Y
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 222 EY------------MPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
Y M G L HI+ G F + A G+E LH
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLHR---ER 306
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
I++ D+KP NILLD + ++SD GLA P+ +I GT+GY+APE++ T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYT 363
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
S D + G +L EM G+
Sbjct: 364 FS--PDWWALGCLLYEMIAGQ 382
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
++YL N I+H D+KP NILLD + ++DF +A P+E +++ GT Y
Sbjct: 127 ALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GTKPY 180
Query: 318 LAPELISRNFGT-VSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK 362
+APE+ S G S D + G+ E+ GRR ++ ++ SSK
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 155 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 212 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ EY G+L ++ ++ G + + P E
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 152 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 209 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 41/207 (19%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENS------------------KFSAEEFIN--E 206
++G G +G+VYK + H+G +A+K + + A E N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 207 LLGLCSEG-----FKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTARGI 259
L+ +C+ K LV+E+ +D+ + + +K GL E ++ RG+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
++LH C I+H D+KP NIL+ K++DFGLA+ + + ++++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRA 179
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEM 346
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 169 LGQGGFGSVYKGQLHTG----RLIAVKMMENSKFSAEEFIN-----ELLGLCSEGFKRAL 219
LGQG FG V+ + +G +L A+K+++ + + + ++L + F L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 220 VYEYMPNGSL--------DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
Y + G L +F++ +K F E A +++LH+ + I+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGII 148
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISDTRGTIGYLAPELISRNF 327
+ D+KP NILLD K++DFGL+K K F GT+ Y+APE+++R
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEVVNRRG 202
Query: 328 GTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 369
T S +D + FG+++ EM G R M +K P ++
Sbjct: 203 HTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 32/201 (15%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFI-NELLGLCSE----------- 213
K+GQG G+VY + TG+ +A++ M + +E I NE+L +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 214 ---GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
G + +V EY+ GSL D + ++GQ + + +E+LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHSNQ--- 137
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H +IK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRK-- 192
Query: 329 TVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ +EM G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEE----FINE--LLGLCSEGFKRALVY 221
LG+GGFG V Q+ TG++ A K +E + + +NE +L + F +L Y
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 222 EY------------MPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
Y M G L HI+ G F + A G+E LH
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLHR---ER 306
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
I++ D+KP NILLD + ++SD GLA P+ +I GT+GY+APE++ T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYT 363
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
S D + G +L EM G+
Sbjct: 364 FS--PDWWALGCLLYEMIAGQ 382
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 169 LGQGGFGSVYKGQLHTG----RLIAVKMMENSKFSAEEFIN-----ELLGLCSEGFKRAL 219
LGQG FG V+ + +G +L A+K+++ + + + ++L + F L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 220 VYEYMPNGSL--------DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
Y + G L +F++ +K F E A +++LH+ + I+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGII 148
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISDTRGTIGYLAPELISRNF 327
+ D+KP NILLD K++DFGL+K K F GT+ Y+APE+++R
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEVVNRRG 202
Query: 328 GTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 369
T S +D + FG+++ EM G R M +K P ++
Sbjct: 203 HTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 169 LGQGGFGSVYKGQLHTG----RLIAVKMMENSKFSAEEFIN-----ELLGLCSEGFKRAL 219
LGQG FG V+ + +G +L A+K+++ + + + ++L + F L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 220 VYEYMPNGSL--------DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
Y + G L +F++ +K F E A +++LH+ + I+
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGII 149
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISDTRGTIGYLAPELISRNF 327
+ D+KP NILLD K++DFGL+K K F GT+ Y+APE+++R
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEVVNRRG 203
Query: 328 GTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 369
T S +D + FG+++ EM G R M +K P ++
Sbjct: 204 HTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 250
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 24/146 (16%)
Query: 250 EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
+I L T + + +L ++ I+H DIKP NILLD + K+ DFG++ + D ++ +
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKT 183
Query: 310 DTRGTIGYLAPELI--SRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPS 367
G Y+APE I S + +SDV+ G+ L E+A GR +P
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP------------YPK 231
Query: 368 W--VYDQLN---KGGDLELRNVTEIE 388
W V+DQL KG +L N E E
Sbjct: 232 WNSVFDQLTQVVKGDPPQLSNSEERE 257
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 155 LPEIIAVTNHFTHKLGQGGFGSVYKGQL------HTGRLIAVKMMENSKFSA--EEFINE 206
L EI F +LG+ FG VYKG L + +A+K +++ EEF +E
Sbjct: 20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 79
Query: 207 --------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSK----------ENKGQT 242
LLG+ ++ ++++ Y +G L + + +++
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 243 FGLEKPHEIAL--GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
LE P + L A G+EYL + ++H D+ N+L+ K+SD GL +
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVY 196
Query: 301 KENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ + + ++ I ++APE I +G S SD++ +G+VL E+
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 73 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 127
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 128 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 185 CI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 41/207 (19%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENS------------------KFSAEEFIN--E 206
++G G +G+VYK + H+G +A+K + + A E N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 207 LLGLCSEG-----FKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTARGI 259
L+ +C+ K LV+E+ +D+ + + +K GL E ++ RG+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
++LH C I+H D+KP NIL+ K++DFGLA+ + + +++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRA 179
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEM 346
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 155 LPEIIAVTNHFTHKLGQGGFGSVYKGQL------HTGRLIAVKMMENSKFSA--EEFINE 206
L EI F +LG+ FG VYKG L + +A+K +++ EEF +E
Sbjct: 3 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 207 --------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSK----------ENKGQT 242
LLG+ ++ ++++ Y +G L + + +++
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 243 FGLEKPHEIAL--GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
LE P + L A G+EYL + ++H D+ N+L+ K+SD GL +
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 301 KENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ + + ++ I ++APE I +G S SD++ +G+VL E+
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 151 DNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL---IAVKMMEN--SKFSAEEFIN 205
DN+L+ +I +LG G FGSV +G + +A+K+++ K EE +
Sbjct: 9 DNLLIADI---------ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 59
Query: 206 E--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGL-EKPHE 250
E L+G+C + LV E G L + + K + + E H+
Sbjct: 60 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 251 IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSIS 309
+++G ++YL + +H D+ N+LL + K+SDFGL+K ++ + + S
Sbjct: 119 VSMG----MKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLE 345
+ + + APE I NF S +SDV+ +G+ + E
Sbjct: 172 AGKWPLKWYAPECI--NFRKFSSRSDVWSYGVTMWE 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 44/210 (20%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENS---------------------KFSAEEFIN 205
++G G +G+VYK + H+G +A+K + + A E N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 206 --ELLGLCSEG-----FKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTA 256
L+ +C+ K LV+E+ +D+ + + +K GL E ++
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG+++LH C I+H D+KP NIL+ K++DFGLA+ + + ++++ T+
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLW 184
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
Y APE++ ++ T + D++ G + EM
Sbjct: 185 YRAPEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ +VY +Y+P + RH +S+ QT +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 131
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 186
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 187 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ Y G+L ++ ++ G + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------ELLGLCSEGF-- 215
+G+G +G V++G G +AVK+ E S F E N +LG +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 216 -----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-----NG 265
+ L+ Y GSL ++ + T I L A G+ +LH
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--GTIGYLAPELI 323
I H D+K NIL+ N ++D GLA H + + + + + GT Y+APE++
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 324 SRNFGTVSC-----KSDVYGFGMVLLEMA 347
V C + D++ FG+VL E+A
Sbjct: 190 DETI-QVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAEEF--------------- 203
F LG G FG V + + +AVKM++ S E
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 204 --INELLGLCSEGFKRALVYEYMPNGSL--------DRHIFSKENKG------QTFGLEK 247
I LLG C+ G ++ EY G L D I SK + LE
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 248 PHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 307
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 308 ISDTRGTIGYLAPELISRNFGTV-SCKSDVYGFGMVLLEM 346
+ R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 227 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQ--TFGLEK-PHE---------I 251
LLG C++ ++ EY G+L ++ ++ G ++ + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------ELLGLCSEGF-- 215
+G+G +G V++G G +AVK+ E S F E N +LG +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 216 -----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-----NG 265
+ L+ Y GSL ++ + T I L A G+ +LH
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--GTIGYLAPELI 323
I H D+K NIL+ N ++D GLA H + + + + + GT Y+APE++
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 324 SRNFGTVSC-----KSDVYGFGMVLLEMA 347
V C + D++ FG+VL E+A
Sbjct: 190 DETI-QVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSVYKGQL-----HTGRLIAVKMME---------NSKFSAE-------EFINEL 207
LG+G FG V + +TG +AVK ++ + K E E I +
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 208 LGLCSE--GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
G+C+E G L+ E++P+GSL ++ +NK L++ + A+ +G++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR 133
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPELIS 324
V H D+ N+L++ K+ DFGL K + + ++ D R + + + APE +
Sbjct: 134 QYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 325 RNFGTVSCKSDVYGFGMVLLEM 346
++ ++ SDV+ FG+ L E+
Sbjct: 191 QSKFYIA--SDVWSFGVTLHEL 210
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 47/220 (21%)
Query: 169 LGQGGFGSVYKGQLH--TGRL----IAVKMMEN-----------SKFSAEEFIN-----E 206
LG+G FG V K GR +AVKM++ S+F+ + +N +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF----------GLEKPHEIAL--- 253
L G CS+ L+ EY GSL + G + L+ P E AL
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 254 -------GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 306
++G++YL ++ ++H D+ NIL+ K+SDFGL++ +E+ +V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEI 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSVYKGQL-----HTGRLIAVKMME---------NSKFSAE-------EFINEL 207
LG+G FG V + +TG +AVK ++ + K E E I +
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 208 LGLCSE--GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
G+C+E G L+ E++P+GSL ++ +NK L++ + A+ +G++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR 145
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPELIS 324
V H D+ N+L++ K+ DFGL K + + ++ D R + + + APE +
Sbjct: 146 QYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 325 RNFGTVSCKSDVYGFGMVLLEM 346
++ ++ SDV+ FG+ L E+
Sbjct: 203 QSKFYIA--SDVWSFGVTLHEL 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 51/261 (19%)
Query: 133 IVFLVFLIHKYRTTMQTVDNILL----PEIIAVTNHF--------------THKLGQGGF 174
+V ++++ H+ R + + +L PE + + + + +LGQG F
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSF 60
Query: 175 GSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE--------------LLGLCS 212
G VY+G + +A+K + + E EF+NE LLG+ S
Sbjct: 61 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 120
Query: 213 EGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTARGIEYLHNGC 266
+G ++ E M G L ++ S + + L K ++A A G+ YL+
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN- 179
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
+H D+ N ++ +F K+ DFG+ + + + + + +++PE S
Sbjct: 180 --KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE--SLK 235
Query: 327 FGTVSCKSDVYGFGMVLLEMA 347
G + SDV+ FG+VL E+A
Sbjct: 236 DGVFTTYSDVWSFGVVLWEIA 256
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 31/199 (15%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE--------------------FINEL 207
+LG G FG+V KG +++ ++ K A + +I +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
+G+C E LV E G L++++ + +E H++++G ++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 145
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPELISRN 326
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 203
Query: 327 FGTVSCKSDVYGFGMVLLE 345
+ S KSDV+ FG+++ E
Sbjct: 204 YYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 31/199 (15%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEE--------------------FINEL 207
+LG G FG+V KG +++ ++ K A + +I +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
+G+C E LV E G L++++ + +E H++++G ++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 145
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPELISRN 326
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 203
Query: 327 FGTVSCKSDVYGFGMVLLE 345
+ S KSDV+ FG+++ E
Sbjct: 204 YYKFSSKSDVWSFGVLMWE 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 79 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 133
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 134 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 191 CI--NYYKFSSKSDVWSFGVLMWE 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 67 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 121
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 122 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 179 CI--NYYKFSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 69 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 123
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 124 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 181 CI--NYYKFSSKSDVWSFGVLMWE 202
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 34/202 (16%)
Query: 169 LGQGGFGSVY-----KGQLHTGRLIAVKMME-------NSKFSAE---------EFINEL 207
LG+G FG V TG ++AVK ++ S + E E I +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 208 LGLCSEGFKRAL--VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
G C + +++L V EY+P GSL ++ + GL + A G+ YLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SDTRGTIGYLAPELIS 324
+H ++ N+LLD++ + K+ DFGLAK P+ +++ + D + + APE +
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 325 RNFGTVSCKSDVYGFGMVLLEM 346
SDV+ FG+ L E+
Sbjct: 194 EY--KFYYASDVWSFGVTLYEL 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAEE---------------- 202
F LG G FG V + + +AVKM++ S E
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 203 -FINELLGLCSEGFKRALVYEYMPNGSL--------DRHIFSKENKG------QTFGLEK 247
I LLG C+ G ++ EY G L D I SK + LE
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 248 PHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 307
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 163 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 308 ISDTRGTIGYLAPELISRNFGTV-SCKSDVYGFGMVLLEM 346
+ R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 220 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 256
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 168 KLGQGGFGSVYKGQLHT------GRLIAVKMMENSKFSAE---------------EFINE 206
+LG+G FG V+ + + L+AVK ++++ +A E I +
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRH---------IFSKENKGQTFGLEKPHEIALGTAR 257
G+C EG +V+EYM +G L++ + ++ N + IA A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G+ YL +H D+ N L+ N + K+ DFG+++ + + T I +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 318 LAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ PE ++ R F T +SDV+ G+VL E+
Sbjct: 197 MPPESIMYRKFTT---ESDVWSLGVVLWEI 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 147 MQTVDNILLPEIIAVTNH---FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSK 197
M + ++ +P+ V + +LGQG FG VY+G + +A+K + +
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 198 FSAE--EFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQ 241
E EF+NE LLG+ S+G ++ E M G L ++ S + +
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 242 TF------GLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 295
L K ++A A G+ YL+ +H D+ N ++ +F K+ DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 296 AKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+ + + + + +++PE S G + SDV+ FG+VL E+A
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMM----ENSKFSAEEFIN-------ELLGLCSEGF-- 215
+G+G +G V++G G +AVK+ E S F E N +LG +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 216 -----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-----NG 265
+ L+ Y GSL ++ + T I L A G+ +LH
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR--GTIGYLAPELI 323
I H D+K NIL+ N ++D GLA H + + + + + GT Y+APE++
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 324 SRNFGTVSC-----KSDVYGFGMVLLEMA 347
V C + D++ FG+VL E+A
Sbjct: 219 DETI-QVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 73 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 127
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 128 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 185 CI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 35/203 (17%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINEL--LGLCSEGF-------- 215
+LG G FG VYK + TG L A K++E S+ E++I E+ L C +
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 216 ----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
K ++ E+ P G++D + + GL +P +I + + +E L+ I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDR-----GLTEP-QIQVVCRQMLEALNFLHSKRII 139
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELI---S 324
H D+K N+L+ +++DFG++ K K + F+ GT ++APE++ +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 193
Query: 325 RNFGTVSCKSDVYGFGMVLLEMA 347
K+D++ G+ L+EMA
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMA 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 35/203 (17%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINEL--LGLCSEGF-------- 215
+LG G FG VYK + TG L A K++E S+ E++I E+ L C +
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 216 ----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
K ++ E+ P G++D + + GL +P +I + + +E L+ I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDR-----GLTEP-QIQVVCRQMLEALNFLHSKRII 131
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELI---S 324
H D+K N+L+ +++DFG++ K K + F+ GT ++APE++ +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 185
Query: 325 RNFGTVSCKSDVYGFGMVLLEMA 347
K+D++ G+ L+EMA
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMA 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K+++ A++ + N +L F AL Y
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 222 EYMPNGSLDRHIFSKE--NKGQTF-GLEKPHEIALGTAR--------GIEYLHNGCDVCI 270
+ + DR F E N G+ F L + + AR ++YLH+ +V
Sbjct: 216 SFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-- 270
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FGT 329
++ D+K N++LD + K++DFGL K K D ++ GT YLAPE++ N +G
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGR 328
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 329 A---VDWWGLGVVMYEMMCGR 346
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 59/297 (19%)
Query: 169 LGQGGFGSVYKGQLH--------TGRLIAVKMME-------NSKFSAE---------EFI 204
LG+G FG V L+ TG ++AVK ++ S + E E I
Sbjct: 17 LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 205 NELLGLCSEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+ G C + +++ LV EY+P GSL ++ GL + A G+ YL
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYL 128
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SDTRGTIGYLAPE 321
H +H + N+LLD++ + K+ DFGLAK P+ +++ + D + + APE
Sbjct: 129 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 185
Query: 322 LISRNFGTVSCK----SDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 377
+ CK SDV+ FG+ L E+ + ++ +S F + +
Sbjct: 186 CLK------ECKFYYASDVWSFGVTLYELL-----TYCDSNQSPHTKFTELIGHTQGQMT 234
Query: 378 DLELRNVTEIESMIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSIDDLQ 428
L L + E + R C ++ C + +A+ RP+ ++ +L+ + + Q
Sbjct: 235 VLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 147 MQTVDNILLPEIIAVTNH---FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSK 197
M + ++ +P+ V + +LGQG FG VY+G + +A+K + +
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 198 FSAE--EFINE--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQ 241
E EF+NE LLG+ S+G ++ E M G L ++ S + +
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 242 TF------GLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 295
L K ++A A G+ YL+ +H D+ N ++ +F K+ DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 296 AKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+ + + + + +++PE S G + SDV+ FG+VL E+A
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 87 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 141
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 142 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 199 CI--NYYKFSSKSDVWSFGVLMWE 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 41/207 (19%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENS------------------KFSAEEFIN--E 206
++G G +G+VYK + H+G +A+K + + A E N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 207 LLGLCSEG-----FKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTARGI 259
L+ +C+ K LV+E+ +D+ + + +K GL E ++ RG+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
++LH C I+H D+KP NIL+ K++DFGLA+ + + +++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTLWYRA 179
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEM 346
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAEE---------------- 202
F LG G FG V + + +AVKM++ S E
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 203 -FINELLGLCSEGFKRALVYEYMPNGSL--------DRHIFSKENKG------QTFGLEK 247
I LLG C+ G ++ EY G L D I SK + LE
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 248 PHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 307
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 165 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 308 ISDTRGTIGYLAPELISRNFGTV-SCKSDVYGFGMVLLEM 346
+ R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 222 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 258
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K+++ A++ + N +L F AL Y
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 222 EYMPNGSLDRHIFSKE--NKGQTF-GLEKPHEIALGTAR--------GIEYLHNGCDVCI 270
+ + DR F E N G+ F L + + AR ++YLH+ +V
Sbjct: 219 SFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-- 273
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FGT 329
++ D+K N++LD + K++DFGL K K D ++ GT YLAPE++ N +G
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGR 331
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 332 A---VDWWGLGVVMYEMMCGR 349
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 47/225 (20%)
Query: 164 HFTHKLGQGGFGSVYKGQ------LHTGRLIAVKMME-------NSKFSAE-----EFIN 205
+ +G+G FG V++ + ++AVKM++ + F E EF N
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 206 ----ELLGLCSEGFKRALVYEYMPNGSLDRHI----------FSKENKGQTFGLEKPHE- 250
+LLG+C+ G L++EYM G L+ + S + + P
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 251 ---------IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 301
IA A G+ YL + +H D+ N L+ N + K++DFGL++
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 302 ENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ + + + I ++ PE I N T +SDV+ +G+VL E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTT--ESDVWAYGVVLWEI 269
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 59/297 (19%)
Query: 169 LGQGGFGSVYKGQLH--------TGRLIAVKMME-------NSKFSAE---------EFI 204
LG+G FG V L+ TG ++AVK ++ S + E E I
Sbjct: 16 LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 205 NELLGLCSEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+ G C + +++ LV EY+P GSL ++ GL + A G+ YL
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYL 127
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SDTRGTIGYLAPE 321
H +H + N+LLD++ + K+ DFGLAK P+ +++ + D + + APE
Sbjct: 128 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
Query: 322 LISRNFGTVSCK----SDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 377
+ CK SDV+ FG+ L E+ + ++ +S F + +
Sbjct: 185 CLK------ECKFYYASDVWSFGVTLYELL-----TYCDSNQSPHTKFTELIGHTQGQMT 233
Query: 378 DLELRNVTEIESMIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSIDDLQ 428
L L + E + R C ++ C + +A+ RP+ ++ +L+ + + Q
Sbjct: 234 VLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 33/207 (15%)
Query: 169 LGQGGFGSVYKGQLH----TGRLIAVKMME---NSKFSAEEFINE--------------L 207
LG+G FGSV +G L T +AVK M+ +S+ EEF++E L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 208 LGLC----SEGFKRALV-YEYMPNGSLDRHI-FSKENKG-QTFGLEKPHEIALGTARGIE 260
LG+C S+G + +V +M G L ++ +S+ G + L+ + + A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
YL N LH D+ N +L + V+DFGL+K + + + + ++A
Sbjct: 162 YLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMA 347
E ++ T KSDV+ FG+ + E+A
Sbjct: 219 ESLADRVYT--SKSDVWAFGVTMWEIA 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 44/283 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKR----------- 217
+G+G FG V K + + +A+K +E S+ + FI EL L
Sbjct: 17 VGRGAFGVVCKAKWR-AKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 218 -ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
LV EY GSL ++ + L ++G+ YLH+ ++H D+K
Sbjct: 75 VCLVMEYAEGGSL-YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 277 PHNILL-DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
P N+LL + K+ DFG A + +++ +G+ ++APE+ + S K D
Sbjct: 134 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCD 186
Query: 336 VYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTE-IESMIARK 394
V+ +G++L E+ R+ + A+ W N ++N+ + IES++ R
Sbjct: 187 VFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH--NGTRPPLIKNLPKPIESLMTR- 240
Query: 395 LCMIGLWCIQVKAADRPSMTKVLEML-------EGSIDDLQMP 430
C + RPSM ++++++ G+ + LQ P
Sbjct: 241 -------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAEEF--------------- 203
F LG G FG V + + +AVKM++ S E
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 204 --INELLGLCSEGFKRALVYEYMPNGSL--------DRHIFSKENKG------QTFGLEK 247
I LLG C+ G ++ EY G L D I SK + LE
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 248 PHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 307
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 308 ISDTRGTIGYLAPELISRNFGTV-SCKSDVYGFGMVLLEM 346
+ R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 227 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 165 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMMENSKFSAEE---------------- 202
F LG G FG V + + +AVKM++ S E
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 203 -FINELLGLCSEGFKRALVYEYMPNGSL--------DRHIFSKENKG------QTFGLEK 247
I LLG C+ G ++ EY G L D I SK + LE
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 248 PHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 307
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 147 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 308 ISDTRGTIGYLAPELISRNFGTV-SCKSDVYGFGMVLLEM 346
+ R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 204 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 44/283 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKR----------- 217
+G+G FG V K + + +A+K +E S+ + FI EL L
Sbjct: 16 VGRGAFGVVCKAKWR-AKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 218 -ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
LV EY GSL ++ + L ++G+ YLH+ ++H D+K
Sbjct: 74 VCLVMEYAEGGSL-YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 277 PHNILL-DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
P N+LL + K+ DFG A + +++ +G+ ++APE+ + S K D
Sbjct: 133 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCD 185
Query: 336 VYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTE-IESMIARK 394
V+ +G++L E+ R+ + A+ W N ++N+ + IES++ R
Sbjct: 186 VFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH--NGTRPPLIKNLPKPIESLMTR- 239
Query: 395 LCMIGLWCIQVKAADRPSMTKVLEML-------EGSIDDLQMP 430
C + RPSM ++++++ G+ + LQ P
Sbjct: 240 -------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 148
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 206 K---SACKSSDLWALGCIIYQLVAG 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 44/216 (20%)
Query: 169 LGQGGFGSVY--------KGQLHTGRLIAVKMMENSKFSAE--EFINE------------ 206
LG+G FG V K + +AVKM+++ + + ++E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 207 ---LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLE---KPHE---------I 251
LLG C++ ++ Y G+L ++ ++ G + + P E
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 252 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT 311
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + ++
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 312 RGTIGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 206 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 126
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 127 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 184 K---SACKSSDLWALGCIIYQLVAG 205
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + +
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 191 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 20 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 197 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 49/226 (21%)
Query: 164 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMMENSKFSAE---------------- 201
F LG G FG V + G+ +AVKM++++ + E
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 202 -EFINELLGLCSEGFKRALVYEYMPNGSL--------------------DRHIFSKENKG 240
E I LLG C+ G ++ EY G L D KE+ G
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED-G 152
Query: 241 QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 300
+ L + A+G+ +L CI H D+ N+LL + + K+ DFGLA+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 301 KENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+++++ + R + ++APE I TV +SDV+ +G++L E+
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 147 MQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKG----QLHTGRLIAVKMMEN--SKFSA 200
+ V ++L+P VT H +G+G FG VY G Q A+K +
Sbjct: 8 LAEVKDVLIPHERVVT-HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV 66
Query: 201 EEFINE--------------LLG--LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFG 244
E F+ E L+G L EG L+ YM +G L + I S +
Sbjct: 67 EAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKD 125
Query: 245 LEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 304
L L ARG+EYL + +H D+ N +LD +F KV+DFGLA+ + +
Sbjct: 126 LIS---FGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR-DILDRE 178
Query: 305 FVSISDTRGT---IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEM 346
+ S+ R + + A E L + F T KSDV+ FG++L E+
Sbjct: 179 YYSVQQHRHARLPVKWTALESLQTYRFTT---KSDVWSFGVLLWEL 221
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 34/202 (16%)
Query: 169 LGQGGFGSVY-----KGQLHTGRLIAVKMME-------NSKFSAE---------EFINEL 207
LG+G FG V TG ++AVK ++ S + E E I +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 208 LGLCSEGFKRAL--VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
G C + +++L V EY+P GSL ++ + GL + A G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SDTRGTIGYLAPELIS 324
+H ++ N+LLD++ + K+ DFGLAK P+ +++ + D + + APE +
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 325 RNFGTVSCKSDVYGFGMVLLEM 346
SDV+ FG+ L E+
Sbjct: 194 EY--KFYYASDVWSFGVTLYEL 213
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D R
Sbjct: 207 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 264 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 293
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 133
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 134 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 191 K---SACKSSDLWALGCIIYQLVAG 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 129
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 130 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 187 K---SACKSSDLWALGCIIYQLVAG 208
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D R
Sbjct: 202 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 259 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 288
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELL 208
P + + LG+G FG V + TGR A+K+++ A++ + N +L
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKE--NKGQTF-GLEKPHEIALGTAR-------- 257
F AL Y + + DR F E N G+ F L + + AR
Sbjct: 65 QNSRHPFLTALKYSFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 121
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
++YLH+ +V ++ D+K N++LD + K++DFGL K K D ++ GT Y
Sbjct: 122 ALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEY 177
Query: 318 LAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGR 350
LAPE++ N +G D +G G+V+ EM GR
Sbjct: 178 LAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGR 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D R
Sbjct: 200 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 257 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 286
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 47/220 (21%)
Query: 169 LGQGGFGSVYKGQLH--TGRL----IAVKMMEN-----------SKFSAEEFIN-----E 206
LG+G FG V K GR +AVKM++ S+F+ + +N +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF----------GLEKPHEIAL--- 253
L G CS+ L+ EY GSL + G + L+ P E AL
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 254 -------GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 306
++G++YL ++ ++H D+ NIL+ K+SDFGL++ +E+ V
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEI 245
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 127
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 128 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 185 K---SACKSSDLWALGCIIYQLVAG 206
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 200 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V D R
Sbjct: 209 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 266 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 295
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 148
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 206 K---SACKSSDLWALGCIIYQLVAG 227
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 43/210 (20%)
Query: 170 GQGGFGSVYKGQLHTGRLIAVK---MMENSKFSAEEFINELLGLCSEGF-------KRA- 218
+G FG V+K QL +AVK + + + +E I G+ E KR
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 219 -------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC-- 269
L+ + GSL ++ KG + +A +RG+ YLH C
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 270 ------ILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIG---YLA 319
I H D K N+LL + ++DFGLA +F P + DT G +G Y+A
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP----GDTHGQVGTRRYMA 193
Query: 320 PELI--SRNFGTVS-CKSDVYGFGMVLLEM 346
PE++ + NF + + D+Y G+VL E+
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ S SD++ G ++ ++ G
Sbjct: 209 K--SASKSSDLWALGCIIYQLVAG 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 45 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 102
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 159
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 160 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 214
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 215 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 152
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 210 K---SACKSSDLWALGCIIYQLVAG 231
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 193 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 25 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 82
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 139
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 140 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 194
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 195 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K+++ A++ + N +L F AL Y
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 222 EYMPNGSLDRHIFSKE--NKGQTF-GLEKPHEIALGTAR--------GIEYLHNGCDVCI 270
+ + DR F E N G+ F L + + AR ++YLH+ +V
Sbjct: 77 SFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-- 131
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FGT 329
++ D+K N++LD + K++DFGL K K D ++ GT YLAPE++ N +G
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 190 A---VDWWGLGVVMYEMMCGR 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 28/201 (13%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEE-----------------FINELLG 209
+LG+G +G V K + + +G++ AVK + + S E+ F G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 210 -LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
L EG + + + SLD+ +KGQT + +IA+ + +E+LH+ +
Sbjct: 101 ALFREG--DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KL 156
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR--N 326
++H D+KP N+L++ K DFG++ + D V+ G Y APE I+ N
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYL---VDDVAKDIDAGCKPYXAPERINPELN 213
Query: 327 FGTVSCKSDVYGFGMVLLEMA 347
S KSD++ G+ +E+A
Sbjct: 214 QKGYSVKSDIWSLGITXIELA 234
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + +
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 200 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 128
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 129 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 186 K---SACKSSDLWALGCIIYQLVAG 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 36 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 93
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 150
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 151 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 205
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 206 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K+++ A++ + N +L F AL Y
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 222 EYMPNGSLDRHIFSKE--NKGQTF-GLEKPHEIALGTAR--------GIEYLHNGCDVCI 270
+ + DR F E N G+ F L + + AR ++YLH+ +V
Sbjct: 76 SFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-- 130
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FGT 329
++ D+K N++LD + K++DFGL K K D ++ GT YLAPE++ N +G
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGR 188
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 189 A---VDWWGLGVVMYEMMCGR 206
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 30 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 87
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 144
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 145 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 199
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 200 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 108
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 165
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 220
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 221 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 22 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 79
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ + K + L
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL-- 136
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 137 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 191
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 192 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 131
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 186
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 187 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 108
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 165
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 220
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 221 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 86
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 143
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 198
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 199 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGS-VYKGQLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F + V +L T R A+K++E E F
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 18 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 75
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 132
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 133 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 187
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 188 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 131
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 186
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 187 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 86
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 143
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 198
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 199 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 156
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 157 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 214 K---SACKSSDLWALGCIIYQLVAG 235
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 131
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 186
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 187 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 431 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 485
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 486 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 543 CI--NYYKFSSKSDVWSFGVLMWE 564
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 203 FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+I ++G+C E LV E G L++++ + +E H++++G ++YL
Sbjct: 432 YIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYL 486
Query: 263 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPE 321
+ +H D+ N+LL K+SDFGL+K EN + + + + + + APE
Sbjct: 487 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 322 LISRNFGTVSCKSDVYGFGMVLLE 345
I N+ S KSDV+ FG+++ E
Sbjct: 544 CI--NYYKFSSKSDVWSFGVLMWE 565
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 53 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 110
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 167
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 168 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 222
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 223 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 154
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 212 K---SACKSSDLWALGCIIYQLVAG 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 152
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 210 K---SACKSSDLWALGCIIYQLVAG 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 21 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 78
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 135
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 136 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-- 190
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 191 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 55 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 112
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 169
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 170 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 224
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 225 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 326 NFGTVSCK-SDVYGFGMVLLEMAGG 349
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 47/220 (21%)
Query: 169 LGQGGFGSVYKGQLH--TGRL----IAVKMMEN-----------SKFSAEEFIN-----E 206
LG+G FG V K GR +AVKM++ S+F+ + +N +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 207 LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF----------GLEKPHEIAL--- 253
L G CS+ L+ EY GSL + G + L+ P E AL
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 254 -------GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 306
++G++YL ++ ++H D+ NIL+ K+SDFGL++ +E+ V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEI 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K ++++ +F E I L C
Sbjct: 96 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 153
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 210
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 211 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 265
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 266 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S + + L K ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N + +F K+ DFG+ + + + + +
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 193 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELL 208
P++ + LG+G FG V + TGR A+K++ A++ + + +L
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 209 GLCSEGFKRALVY------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
F AL Y EY G L H+ ++ + F E+
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIV 120
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
+EYLH+ +++ DIK N++LD + K++DFGL K +D ++ GT
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 175
Query: 317 YLAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGR 350
YLAPE++ N +G D +G G+V+ EM GR
Sbjct: 176 YLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K++ A++ + + +L F AL Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 222 ------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
EY G L H+ ++ + F E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FG 328
+++ DIK N++LD + K++DFGL K +D ++ GT YLAPE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K++ A++ + + +L F AL Y
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 222 ------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
EY G L H+ ++ + F E+ +EYLH+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 128
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FG 328
+++ DIK N++LD + K++DFGL K +D ++ GT YLAPE++ N +G
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 187 RA---VDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K++ A++ + + +L F AL Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 222 ------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
EY G L H+ ++ + F E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FG 328
+++ DIK N++LD + K++DFGL K +D ++ GT YLAPE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K++ A++ + + +L F AL Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 222 ------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
EY G L H+ ++ + F E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FG 328
+++ DIK N++LD + K++DFGL K +D ++ GT YLAPE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K++ A++ + + +L F AL Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 222 ------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
EY G L H+ ++ + F E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FG 328
+++ DIK N++LD + K++DFGL K +D ++ GT YLAPE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 19 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S L K ++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 196 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 165 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMMENSKFSAE--EFINE---------- 206
+ +LGQG FG VY+G + +A+K + + E EF+NE
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 207 ----LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTF------GLEKPHEIALGTA 256
LLG+ S+G ++ E M G L ++ S L K ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMA 347
+++PE S G + SDV+ FG+VL E+A
Sbjct: 206 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 169 LGQGGFGSVYKGQL--HTGRLI--AVKMMEN-------SKFSAEEFINE---------LL 208
LG+G FG VY+G H G I AVK + KF +E I + L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ E ++ E P G L ++ +N + L +L + + YL + +
Sbjct: 76 GIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAMAYLES---I 128
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 185
Query: 329 TVSCKSDVYGFGMVLLEM 346
+ SDV+ F + + E+
Sbjct: 186 RFTTASDVWMFAVCMWEI 203
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSV-YKGQLHTGRLIAVKMMENSKFSAEEFI------NELLGLCSEGFKRALVY 221
LG+G FG V + TGR A+K++ A++ + + +L F AL Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 222 ------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
EY G L H+ ++ + F E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN-FG 328
+++ DIK N++LD + K++DFGL K +D ++ GT YLAPE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 169 LGQGGFGSVY-----KGQLHTGRLIAVKMME-------NSKFSAE---------EFINEL 207
LG+G FG V TG ++AVK ++ S + E E I +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 208 LGLCSEGFKRAL--VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
G C + +L V EY+P GSL ++ + GL + A G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SDTRGTIGYLAPELIS 324
+H D+ N+LLD++ + K+ DFGLAK P+ ++ + D + + APE +
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 325 RNFGTVSCKSDVYGFGMVLLEM 346
SDV+ FG+ L E+
Sbjct: 211 EY--KFYYASDVWSFGVTLYEL 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 169 LGQGGFGSVYKGQL--HTGRLI--AVKMMEN-------SKFSAEEFINE---------LL 208
LG+G FG VY+G H G I AVK + KF +E I + L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ E ++ E P G L ++ +N + L +L + + YL + +
Sbjct: 92 GIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAMAYLES---I 144
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 201
Query: 329 TVSCKSDVYGFGMVLLEM 346
+ SDV+ F + + E+
Sbjct: 202 RFTTASDVWMFAVCMWEI 219
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 151 DNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL---IAVKMMEN--SKFSAEEFIN 205
DN+L+ +I +LG G FGSV +G + +A+K+++ K EE +
Sbjct: 335 DNLLIADI---------ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 385
Query: 206 E--------------LLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGL-EKPHE 250
E L+G+C + LV E G L + + K + + E H+
Sbjct: 386 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 251 IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSIS 309
+++G ++YL + +H ++ N+LL + K+SDFGL+K ++ + + S
Sbjct: 445 VSMG----MKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLE 345
+ + + APE I NF S +SDV+ +G+ + E
Sbjct: 498 AGKWPLKWYAPECI--NFRKFSSRSDVWSYGVTMWE 531
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 28/204 (13%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEE------------------FIN 205
F LG+G F +V +L T R A+K++E E F
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+L + K Y NG L ++I + +T EI +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
S SD++ G ++ ++ G
Sbjct: 209 KSAXKS--SDLWALGCIIYQLVAG 230
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 169 LGQGGFGSVYKGQL--HTGRLI--AVKMMEN-------SKFSAEEFINE---------LL 208
LG+G FG VY+G H G I AVK + KF +E I + L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
G+ E ++ E P G L ++ +N + L +L + + YL + +
Sbjct: 80 GIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAMAYLES---I 132
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 189
Query: 329 TVSCKSDVYGFGMVLLEM 346
+ SDV+ F + + E+
Sbjct: 190 RFTTASDVWMFAVCMWEI 207
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 168 KLGQGGFGSVYKGQLHT-GRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + + G+L+AVK M+ K E + NE++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ Q + L + + LH +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 146
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRL 200
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+G + D++ G++++EM G
Sbjct: 201 PYGP---EVDIWSLGIMVIEMVDG 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINE----LLGLCSEGFKRALVY 221
K+G+G FG V+KG T +++A+K+++ + E + +L C +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 222 EYMPNGSLDRHIFSKENKGQTFGLEKP---HEIALGTA-----RGIEYLHNGCDVCILHF 273
Y+ + L I G L +P E + T +G++YLH+ + H
Sbjct: 73 SYLKDTKL-WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HR 128
Query: 274 DIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
DIK N+LL + K++DFG+A K N FV GT ++APE+I ++
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEVIKQS--A 180
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K+D++ G+ +E+A G
Sbjct: 181 YDSKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINE----LLGLCSEGFKRALVY 221
K+G+G FG V+KG T +++A+K+++ + E + +L C +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 222 EYMPNGSLDRHIFSKENKGQTFGLEKP---HEIALGTA-----RGIEYLHNGCDVCILHF 273
Y+ + L I G L +P E + T +G++YLH+ + H
Sbjct: 93 SYLKDTKL-WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HR 148
Query: 274 DIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
DIK N+LL + K++DFG+A K N FV GT ++APE+I ++
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEVIKQS--A 200
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K+D++ G+ +E+A G
Sbjct: 201 YDSKADIWSLGITAIELARGE 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 168 KLGQGGFGSVYKGQLHT-GRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + + G+L+AVK M+ K E + NE++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ Q + L + + LH +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 137
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRL 191
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+G + D++ G++++EM G
Sbjct: 192 PYGP---EVDIWSLGIMVIEMVDG 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINE----LLGLCSEGFKRALVY 221
K+G+G FG V+KG T +++A+K+++ + E + +L C +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 222 EYMPNGSLDRHIFSKENKGQTFGLEKP---HEIALGTA-----RGIEYLHNGCDVCILHF 273
Y+ + L I G L +P E + T +G++YLH+ + H
Sbjct: 73 SYLKDTKL-WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HR 128
Query: 274 DIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
DIK N+LL + K++DFG+A K N FV GT ++APE+I ++
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVIKQS--A 180
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K+D++ G+ +E+A G
Sbjct: 181 YDSKADIWSLGITAIELARGE 201
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 168 KLGQGGFGSVYKGQLHT-GRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + + G+L+AVK M+ K E + NE++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ Q + L + + LH +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 148
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRL 202
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+G + D++ G++++EM G
Sbjct: 203 PYGP---EVDIWSLGIMVIEMVDG 223
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 167 HKLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINE----LLGLCSEGFKRALVY 221
K+G+G FG V+KG T +++A+K+++ + E + +L C +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 222 EYMPNGSLDRHIFSKENKGQTFGLEKP---HEIALGTA-----RGIEYLHNGCDVCILHF 273
Y+ + L I G L +P E + T +G++YLH+ + H
Sbjct: 88 SYLKDTKL-WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HR 143
Query: 274 DIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
DIK N+LL + K++DFG+A K N FV GT ++APE+I ++
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVIKQS--A 195
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K+D++ G+ +E+A G
Sbjct: 196 YDSKADIWSLGITAIELARGE 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 134
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 135 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 192 TRTF---SHASDTWMFGVTLWEM 211
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 168 KLGQGGFGSVYKGQLHT-GRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + + G+L+AVK M+ K E + NE++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ Q + L + + LH +
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 141
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRL 195
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+G + D++ G++++EM G
Sbjct: 196 PYGP---EVDIWSLGIMVIEMVDG 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 218 ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKP 277
++ E+M GSLD+ + + + E ++++ RG+ YL I+H D+KP
Sbjct: 90 SICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKP 143
Query: 278 HNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSCKS 334
NIL++ K+ DFG++ N FV GT Y+APE R GT S +S
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMAPE---RLQGTHYSVQS 194
Query: 335 DVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 371
D++ G+ L+E+A GR + +A F V D
Sbjct: 195 DIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVD 231
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
LV E + G L F + K + F + I + ++H DV ++H D+KP
Sbjct: 83 LVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPE 135
Query: 279 NILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L + N K+ DFG A+ P +N + T+ Y APEL+++N SC D
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYDESC--D 191
Query: 336 VYGFGMVLLEMAGGR 350
++ G++L M G+
Sbjct: 192 LWSLGVILYTMLSGQ 206
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +++ F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR 257
S G K+ VY +Y+P ++ R QT + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
+ Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---Y 187
Query: 317 YLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 188 YRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +++ F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 131
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 186
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 187 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 156 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MMENSKFSAEEF-INELLGLC- 211
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +++ F E I L C
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 212 ---------SEGFKRALVY-----EYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGT 255
S G K+ VY +Y+P + RH +S+ QT +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAK--QTLPVIYVKLYMYQL 131
Query: 256 ARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISDTRGT 314
R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS +R
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-- 186
Query: 315 IGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
Y APELI FG S DV+ G VL E+ G+
Sbjct: 187 -YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 39/207 (18%)
Query: 166 THKLGQGGFGSVYK-GQLHTGRLIAVKMMENSKFS-AEEFINEL----------LGLCSE 213
T LG G FG V+K + TG +A K+++ EE NE+ L +
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 214 GFKR----ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIAL--GTARGIEYLHNGC 266
F+ LV EY+ G L DR I +++ L + I GI ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRII------DESYNLTELDTILFMKQICEGIRHMHQ-- 205
Query: 267 DVCILHFDIKPHNILL---DHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPEL 322
+ ILH D+KP NIL D I K+ DFGLA ++ P+E V+ GT +LAPE+
Sbjct: 206 -MYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNF----GTPEFLAPEV 259
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAGG 349
++ +F VS +D++ G++ + G
Sbjct: 260 VNYDF--VSFPTDMWSVGVIAYMLLSG 284
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 188 TRTF---SHASDTWMFGVTLWEM 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 188 TRTF---SHASDTWMFGVTLWEM 207
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
+G G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EYMP G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D KV+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
+G G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EYMP G + H+ + G +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+L+D KV+DFG AK + GT YLAPE+I S+
Sbjct: 160 -LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 214 GYNKA---VDWWALGVLIYEMAAG 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 83 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 134
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKE--NDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ E N+FV GT Y++PE R GT S
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------GTRSYMSPE---RLQGTHYSV 185
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 186 QSDIWSMGLSLVEMAVGR 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 168 KLGQGGFGSVYKGQLHT-GRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + + G+L+AVK M+ K E + NE++ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ Q + L + + LH +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 268
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRL 322
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+G + D++ G++++EM G
Sbjct: 323 PYGP---EVDIWSLGIMVIEMVDG 343
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 188 TRTF---SHASDTWMFGVTLWEM 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 99 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 150
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 201
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 202 QSDIWSMGLSLVEMAVGR 219
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 169 LGQGGFGSVYKG----QLHTGRL-IAVKMME-------NSKFSAEEFIN---------EL 207
LG G FG+VYKG + T ++ +A+K++ N +F E I L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + LV + MP+G L ++ K+N G L +IA +G+ YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA----KGMMYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
+ ++H D+ N+L+ K++DFGLA+ + + + I ++A E I +
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--H 192
Query: 327 FGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVT 385
+ + +SDV+ +G+ + E M G + + TR + D L KG L +
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--------IPDLLEKGERLPQPPIC 244
Query: 386 EIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
I+ + M+ + C + A RP ++
Sbjct: 245 TID------VYMVMVKCWMIDADSRPKFKEL 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 134
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 135 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 192 TRTF---SHASDTWMFGVTLWEM 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 169 LGQGGFGSVYKG----QLHTGRL-IAVKMME-------NSKFSAEEFIN---------EL 207
LG G FG+VYKG + T ++ +A+K++ N +F E I L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + LV + MP+G L ++ K+N G L +IA +G+ YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIA----KGMMYLE--- 157
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
+ ++H D+ N+L+ K++DFGLA+ + + + I ++A E I +
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--H 215
Query: 327 FGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVT 385
+ + +SDV+ +G+ + E M G + + TR + D L KG L +
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--------IPDLLEKGERLPQPPIC 267
Query: 386 EIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
I+ + M+ + C + A RP ++
Sbjct: 268 TID------VYMVMVKCWMIDADSRPKFKEL 292
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRALVYEYMPN 226
++G G FG+VY + + ++A+K M S + E +++ R L PN
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV-----RFLQKLRHPN 76
Query: 227 GSLDRHIFSKENK---------GQTFGLEKPHEIAL----------GTARGIEYLHNGCD 267
R + +E+ G L + H+ L G +G+ YLH+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 135
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
++H D+K NILL + K+ DFG A N FV GT ++APE+I + +
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMD 187
Query: 327 FGTVSCKSDVYGFGMVLLEMAGGRRNS-NMNA 357
G K DV+ G+ +E+A + NMNA
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 30/203 (14%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAV----------------KMMENSKFSA--EEFINELLG 209
LG+GGFG V+ Q+ TG+L A M+E + FI L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI--ALGTARGIEYLHNGCD 267
LV M G + HI++ + G ++P I G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP--GFQEPRAIFYTAQIVSGLEHLHQ--- 307
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGEE 365
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
S D + G+ L EM R
Sbjct: 366 YDFSV--DYFALGVTLYEMIAAR 386
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 140
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 141 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 198 TRTF---SHASDTWMFGVTLWEM 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRALVYEYMPN 226
++G G FG+VY + + ++A+K M S + E +++ R L PN
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV-----RFLQKLRHPN 115
Query: 227 GSLDRHIFSKENK---------GQTFGLEKPHEIAL----------GTARGIEYLHNGCD 267
R + +E+ G L + H+ L G +G+ YLH+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN- 174
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
++H D+K NILL + K+ DFG A N FV GT ++APE+I + +
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMD 226
Query: 327 FGTVSCKSDVYGFGMVLLEMAGGRRNS-NMNA 357
G K DV+ G+ +E+A + NMNA
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAV----------------KMMENSKFSA--EEFINELLG 209
LG+GGFG V+ Q+ TG+L A M+E + FI L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR---GIEYLHNGC 266
LV M G + HI++ + G ++P I TA+ G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP--GFQEPRAI-FYTAQIVSGLEHLHQ-- 307
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 308 -RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGE 364
Query: 327 FGTVSCKSDVYGFGMVLLEMAGGR 350
S D + G+ L EM R
Sbjct: 365 EYDFSV--DYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAV----------------KMMENSKFSA--EEFINELLG 209
LG+GGFG V+ Q+ TG+L A M+E + FI L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR---GIEYLHNGC 266
LV M G + HI++ + G ++P I TA+ G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP--GFQEPRAI-FYTAQIVSGLEHLHQ-- 307
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 308 -RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGE 364
Query: 327 FGTVSCKSDVYGFGMVLLEMAGGR 350
S D + G+ L EM R
Sbjct: 365 EYDFSV--DYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 30/203 (14%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAV----------------KMMENSKFSA--EEFINELLG 209
LG+GGFG V+ Q+ TG+L A M+E + FI L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI--ALGTARGIEYLHNGCD 267
LV M G + HI++ + G ++P I G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP--GFQEPRAIFYTAQIVSGLEHLHQ--- 307
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGEE 365
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
S D + G+ L EM R
Sbjct: 366 YDFSV--DYFALGVTLYEMIAAR 386
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 40/207 (19%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFINELLGL----------CSEGF-- 215
+G GGFG V+K + G+ +K ++ + AE + L L C +GF
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDY 78
Query: 216 ---------KRA------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
R+ + E+ G+L++ I ++ +G+ E+ +G++
Sbjct: 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVD 136
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
Y+H+ +++ D+KP NI L K+ DFGL +ND ++GT+ Y++P
Sbjct: 137 YIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVT--SLKNDGKRXR-SKGTLRYMSP 190
Query: 321 ELI-SRNFGTVSCKSDVYGFGMVLLEM 346
E I S+++G + D+Y G++L E+
Sbjct: 191 EQISSQDYGK---EVDLYALGLILAEL 214
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 142 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 193
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 244
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 245 QSDIWSMGLSLVEMAVGR 262
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 168 KLGQGGFGSVYKG-QLHTGRLIAVKMM-----ENSKFSAEEFINELLGLCSEGFKR---- 217
KLG G + +VYKG TG +A+K + E + +A I+ + L E R
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 218 -------ALVYEYMPNG---SLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
LV+E+M N +D +G L K + L +G+ + H
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHENK- 128
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPELI--S 324
ILH D+KP N+L++ K+ DFGLA+ F N F S T+ Y AP+++ S
Sbjct: 129 --ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF---SSEVVTLWYRAPDVLMGS 183
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGR 350
R T S D++ G +L EM G+
Sbjct: 184 R---TYSTSIDIWSCGCILAEMITGK 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 52/243 (21%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRALVY------ 221
LGQG FG V K + R A+K + +++ ++E++ L S + + Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 222 ---------------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
EY NG+L I S EN Q ++ + +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQ--RDEYWRLFRQILEALS 130
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------SI 308
Y+H+ I+H D+KP NI +D + K+ DFGLAK + D + ++
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNATRSSKA 363
+ GT Y+A E++ G + K D+Y G++ EM G R + + RS
Sbjct: 188 TSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSI 246
Query: 364 YFP 366
FP
Sbjct: 247 EFP 249
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLI--AVKMMENSKFSAEE----FINELLGLCSEGFKR-- 217
KLG G FG V +G+ +G+ + AVK ++ S E FI E+ + S +
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 218 -----------ALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
+V E P GSL DR ++++G F L A+ A G+ YL +
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGSLLDR---LRKHQGH-FLLGTLSRYAVQVAEGMGYLESK 140
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT-IGYLAPE-LI 323
+H D+ N+LL + K+ DFGL + P+ +D + + R + APE L
Sbjct: 141 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 324 SRNFGTVSCKSDVYGFGMVLLEM 346
+R F S SD + FG+ L EM
Sbjct: 198 TRTF---SHASDTWMFGVTLWEM 217
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 107 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 158
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 209
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 210 QSDIWSMGLSLVEMAVGR 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 257 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 308
R IE + + C I+H D+KP NIL+ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ GT YL+PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 80 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 131
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 182
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 168 KLGQGGFGSVYKGQLHT-GRLIAVKMMENSKFSAEEFI-NELLGLCSE------------ 213
K+G+G G V + + G+L+AVK M+ K E + NE++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 214 --GFKRALVYEYMPNGSL-DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
G + +V E++ G+L D ++ N+ Q + L + + LH +
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 191
Query: 271 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISDTRGTIGYLAPELISR- 325
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRL 245
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+G + D++ G++++EM G
Sbjct: 246 PYGP---EVDIWSLGIMVIEMVDG 266
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 80 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 131
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 182
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 80 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 131
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 182
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 80 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 131
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 182
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 218 ALVYEYMPNGSLDRHIFSKENK--GQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+M GSLD+ + K + Q G ++++ +G+ YL I+H D+
Sbjct: 80 SICMEHMDGGSLDQ-VLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHRDV 131
Query: 276 KPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISDTRGTIGYLAPELISRNFGT-VSC 332
KP NIL++ K+ DFG++ N FV GT Y++PE R GT S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSV 182
Query: 333 KSDVYGFGMVLLEMAGGR 350
+SD++ G+ L+EMA GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+++D KV+DFGLAK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 257 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 308
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ GT YL+PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 42/208 (20%)
Query: 169 LGQGGFGSVYKGQ----LHTGRLIAVKMME------NSKFSA---------EE----FIN 205
LG+GG+G V++ + +TG++ A+K+++ N+K +A EE FI
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 206 ELLGLCSEGFKRALVYEYMPNG----SLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
+L+ G K L+ EY+ G L+R E+ + E +ALG +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI--SMALG------H 136
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPE 321
LH I++ D+KP NI+L+H K++DFGL K +D GTI Y+APE
Sbjct: 137 LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPE 191
Query: 322 LISRNFGTVSCKSDVYGFGMVLLEMAGG 349
++ R+ + D + G ++ +M G
Sbjct: 192 ILMRSGHNRAV--DWWSLGALMYDMLTG 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 257 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 308
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ GT YL+PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 257 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 308
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ GT YL+PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 42/208 (20%)
Query: 169 LGQGGFGSVYKGQ----LHTGRLIAVKMME------NSKFSA---------EE----FIN 205
LG+GG+G V++ + +TG++ A+K+++ N+K +A EE FI
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 206 ELLGLCSEGFKRALVYEYMPNG----SLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
+L+ G K L+ EY+ G L+R E+ + E +ALG +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI--SMALG------H 136
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPE 321
LH I++ D+KP NI+L+H K++DFGL K +D GTI Y+APE
Sbjct: 137 LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPE 191
Query: 322 LISRNFGTVSCKSDVYGFGMVLLEMAGG 349
++ R+ + D + G ++ +M G
Sbjct: 192 ILMRSGHNRAV--DWWSLGALMYDMLTG 217
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRL--IAVKMME----NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G I V +ME S + +E ++E L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 168
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 169 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 229 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 277
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 278 CTID------VYMIMVKCWMIDADSRPKFRELI 304
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 49/244 (20%)
Query: 159 IAVTNHFTHK-LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFI------NELLGL 210
+ + + HK LG+G FG V+ + T + A+K ++ ++ + +L L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 211 -----------CSEGFKRAL--VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR 257
C+ K L V EY+ G L HI S F L + A
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIIL 129
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH----PKENDFVSISDTRG 313
G+++LH+ I++ D+K NILLD + K++DFG+ K + K N F G
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC------G 180
Query: 314 TIGYLAPELISRNFGTVSCKS-DVYGFGMVLLEMAGGR-------RNSNMNATRSSKAYF 365
T Y+APE++ G S D + FG++L EM G+ ++ R ++
Sbjct: 181 TPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 237
Query: 366 PSWV 369
P W+
Sbjct: 238 PRWL 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 257 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 308
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ GT YL+PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 49/244 (20%)
Query: 159 IAVTNHFTHK-LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFI------NELLGL 210
+ + + HK LG+G FG V+ + T + A+K ++ ++ + +L L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 211 -----------CSEGFKRAL--VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR 257
C+ K L V EY+ G L HI S F L + A
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIIL 130
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH----PKENDFVSISDTRG 313
G+++LH+ I++ D+K NILLD + K++DFG+ K + K N+F G
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC------G 181
Query: 314 TIGYLAPELISRNFGTVSCKS-DVYGFGMVLLEMAGGR-------RNSNMNATRSSKAYF 365
T Y+APE++ G S D + FG++L EM G+ ++ R ++
Sbjct: 182 TPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 238
Query: 366 PSWV 369
P W+
Sbjct: 239 PRWL 242
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 165 FTHKLGQGGFGSVYKGQL-HTGRLIAVKMMENSKFSAEE-------------------FI 204
F LG+G FG V ++ TG L AVK+++ ++ F+
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 205 NELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHN 264
+L + V E++ G L HI K + F + A + +LH
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIISALMFLH- 141
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
D I++ D+K N+LLDH K++DFG+ K + V+ + GT Y+APE++
Sbjct: 142 --DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQ 197
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGR-------RNSNMNATRSSKAYFPSWVYD 371
+ D + G++L EM G + A + + +P+W+++
Sbjct: 198 EMLYGPAV--DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 257 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 308
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ GT YL+PE + +V +SDVY G VL E+ G
Sbjct: 194 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+L++ K+ DFGLA+ E+D +++ T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLN 374
Y APE++ + G D++ G +L EM S++ FP Y DQLN
Sbjct: 212 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEML------------SNRPIFPGKHYLDQLN 258
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 58/230 (25%)
Query: 165 FTHKLGQGGFGSVYKG-QLHTGRLIAVK------------------MMENSKFSAEEFIN 205
KLG+G +G V+K TG ++AVK +M ++ S E I
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIV 72
Query: 206 ELLGLCSEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEY 261
LL + R LV++YM D H + N LE H+ + + I+Y
Sbjct: 73 NLLNVLRADNDRDVYLVFDYM---ETDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKY 124
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-------------FHPKEN----- 303
LH+G +LH D+KP NILL+ KV+DFGL++ EN
Sbjct: 125 LHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 304 -DFVSISDTRGTIGYLAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
D ++D T Y APE++ G+ D++ G +L E+ G+
Sbjct: 182 DDQPILTDYVATRWYRAPEIL---LGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 219 LVYEYMPNGS-LD--RHIFSK-ENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFD 274
LV + + GS LD +HI +K E+K I G+EYLH + H D
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRD 141
Query: 275 IKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR---GTIGYLAPELISRNFGTVS 331
+K NILL + +++DFG++ F D + GT ++APE++ + G
Sbjct: 142 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YD 200
Query: 332 CKSDVYGFGMVLLEMAGG 349
K+D++ FG+ +E+A G
Sbjct: 201 FKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 219 LVYEYMPNGS-LD--RHIFSK-ENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFD 274
LV + + GS LD +HI +K E+K I G+EYLH + H D
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRD 146
Query: 275 IKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR---GTIGYLAPELISRNFGTVS 331
+K NILL + +++DFG++ F D + GT ++APE++ + G
Sbjct: 147 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YD 205
Query: 332 CKSDVYGFGMVLLEMAGG 349
K+D++ FG+ +E+A G
Sbjct: 206 FKADIWSFGITAIELATG 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 145
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK K + GT YLAPE+I S+
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLC----GTPEYLAPEIILSKG 200
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 201 YNKA---VDWWALGVLIYEMAAG 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
+G G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D KV+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 195 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 243
Query: 385 TEIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ MI RK C + A RP +++
Sbjct: 244 CTIDVYMIMRK-------CWMIDADSRPKFRELI 270
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 165 FTHKLGQGGFGSV--YKGQLHTGRLIAVKMM--------ENSKFSAEEF-------INEL 207
F KLG+GGF V +G LH G A+K + E ++ A+ I L
Sbjct: 33 FIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 208 LGLC--SEGFKRA--LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
+ C G K L+ + G+L I ++KG ++ + LG RG+E +H
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFG---LAKFHPK-ENDFVSISD---TRGTIG 316
H D+KP NILL P + D G A H + +++ D R TI
Sbjct: 152 AKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 317 YLAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 355
Y APEL S ++ + ++DV+ G VL M G +M
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK K + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLC----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 144
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 145 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 205 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 253
Query: 385 TEIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ MI RK C + A RP +++
Sbjct: 254 CTIDVYMIMRK-------CWMIDADSRPKFRELI 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMM------------------ENSKFSAEEFINELLG 209
LG G FG V G+ TG +AVK++ +N K I +L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ S +V EY+ G L F K ++ + G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXS--CGSPNYAAPEVISGRL-Y 192
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
+ D++ G++L + G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 137
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 246
Query: 385 TEIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ MI RK C + A RP +++
Sbjct: 247 CTIDVYMIMRK-------CWMIDADSRPKFRELI 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EY P G + H+ + G +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS-- 159
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+++D KV+DFG AK + GT YLAPE+I S+
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 214 GYNKA---VDWWALGVLIYEMAAG 234
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 135
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 244
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 245 CTID------VYMIMVKCWMIDADSRPKFRELI 271
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 52/234 (22%)
Query: 164 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKM--MENSKFSAEEFINELLGL---------- 210
+LG GGFG V + TG +A+K E S + E + E+ +
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 211 ---CSEGFKRA-------LVYEYMPNGSLDRHIFSKENKGQTFGL-EKPHEIALG-TARG 258
+G ++ L EY G L +++ EN GL E P L +
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSA 134
Query: 259 IEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSI-SDTRGT 314
+ YLH I+H D+KP NI+L I K+ D G AK E D + ++ GT
Sbjct: 135 LRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGT 187
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW 368
+ YLAPEL+ + TV+ D + FG + E G R + P+W
Sbjct: 188 LQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFR-----------PFLPNW 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+++D +V+DFGLAK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EY P G + H+ + G +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+++D KV+DFG AK + GT YLAPE+I S+
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 GYNKA---VDWWALGVLIYEMAAG 235
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 135
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 244
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 245 CTID------VYMIMVKCWMIDADSRPKFRELI 271
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EY P G + H+ + G +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS-- 160
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+++D KV+DFG AK + GT YLAPE+I S+
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 GYNKA---VDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFXEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 195 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 243
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 244 CTID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 52/234 (22%)
Query: 164 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKM--MENSKFSAEEFINELLGL---------- 210
+LG GGFG V + TG +A+K E S + E + E+ +
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 211 ---CSEGFKRA-------LVYEYMPNGSLDRHIFSKENKGQTFGL-EKPHEIALG-TARG 258
+G ++ L EY G L +++ EN GL E P L +
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSA 133
Query: 259 IEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSI-SDTRGT 314
+ YLH I+H D+KP NI+L I K+ D G AK E D + ++ GT
Sbjct: 134 LRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGT 186
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW 368
+ YLAPEL+ + TV+ D + FG + E G R + P+W
Sbjct: 187 LQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFR-----------PFLPNW 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 128
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 189 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 237
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 238 CTID------VYMIMVKCWMIDADSRPKFRELI 264
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 34/203 (16%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMMENS-------KFSAEEF----------INELLG 209
K+G+G +G V+K + TG+++A+K S K + E + LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCDV 268
+ + LV+EY + L H + +G L K I T + + + H + C
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK--SITWQTLQAVNFCHKHNC-- 123
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI--SRN 326
+H D+KP NIL+ + + K+ DFG A+ +D+ D T Y +PEL+
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDTQ 179
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+G DV+ G V E+ G
Sbjct: 180 YGP---PVDVWAIGCVFAELLSG 199
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFXEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 35/204 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVK--MMENSKFSAEEFINELLGLCSEGFKRA------ 218
KLG+G + +VYKG+ T L+A+K +E+ + + I E+ L + K A
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLL--KDLKHANIVTLH 66
Query: 219 ----------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
LV+EY+ + L +++ ++ G + RG+ Y H
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQK-- 120
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
+LH D+KP N+L++ K++DFGLA+ K + + T+ Y P+++ G
Sbjct: 121 -VLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDIL---LG 174
Query: 329 TV--SCKSDVYGFGMVLLEMAGGR 350
+ S + D++G G + EMA GR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EY P G + H+ + G +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEYLHS-- 159
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+++D KV+DFG AK + GT YLAPE+I S+
Sbjct: 160 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 214 GYNKA---VDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EY P G + H+ + G +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEYLHS-- 160
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+++D KV+DFG AK + GT YLAPE+I S+
Sbjct: 161 -LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 GYNKA---VDWWALGVLIYEMAAG 235
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 138
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 199 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 247
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 248 CTID------VYMIMVKCWMIDADSRPKFRELI 274
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFXEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 136
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 245
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 246 CTID------VYMIMVKCWMIDADSRPKFRELI 272
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 195 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 243
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 244 CTID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 137
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 246
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 247 CTID------VYMIMVKCWMIDADSRPKFRELI 273
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 192 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 195 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 243
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 244 CTID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 165 FTHKLGQGGFGSVYKGQLHTG---RLIAVKMMENSKFSAEEFINELLGLCS--------- 212
F KLG G FG V+ + + R+I + S+ E+ E+ L S
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 213 -EGFK----RALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
E F+ +V E G L I S + +G+ E+ + Y H+
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 268 VCILHFDIKPHNILLD----HNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPEL 322
++H D+KP NIL H+ I K+ DFGLA+ F E+ ++ GT Y+APE+
Sbjct: 144 -HVVHKDLKPENILFQDTSPHSPI-KIIDFGLAELFKSDEHS----TNAAGTALYMAPEV 197
Query: 323 ISRNFGTVSCKSDVYGFGMVLLEMAGG 349
R+ V+ K D++ G+V+ + G
Sbjct: 198 FKRD---VTFKCDIWSAGVVMYFLLTG 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 169 LGQGGFGSV-----YKGQLHTG-RLIAVKMMENS-------------KFSAEEFINELLG 209
LG+G FG V YK Q + I+ ++++ S K I +L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + +V EY G L +I K+ + G +I IEY H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA----IEYCHRHK--- 128
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
I+H D+KP N+LLD N K++DFGL+ N F+ S G+ Y APE+I+
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSC--GSPNYAAPEVINGKL-Y 184
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
+ DV+ G+VL M GR
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQR-------TATYITELANALSYC 128
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-GTIGYLAPELIS 324
++H DIKP N+LL N K++DFG + P S DT GT+ YL PE+I
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEMIE 183
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ E G
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVG 206
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 137
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 246
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 247 CTID------VYMIMVKCWMIDADSRPKFRELI 273
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 192 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 53/220 (24%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFINELLGL----------CSEGF-- 215
+G GGFG V+K + G+ ++ ++ + AE + L L C +GF
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDY 79
Query: 216 ----------------------KRA------LVYEYMPNGSLDRHIFSKENKGQTFGLEK 247
R+ + E+ G+L++ I ++ +G+
Sbjct: 80 DPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVL 137
Query: 248 PHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 307
E+ +G++Y+H+ ++H D+KP NI L K+ DFGL +ND
Sbjct: 138 ALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVT--SLKNDGKR 192
Query: 308 ISDTRGTIGYLAPELI-SRNFGTVSCKSDVYGFGMVLLEM 346
+ ++GT+ Y++PE I S+++G + D+Y G++L E+
Sbjct: 193 -TRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAEL 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 159
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 160 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 220 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 268
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 269 CTID------VYMIMVKCWMIDADSRPKFRELI 295
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 192 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 137
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 246
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 247 CTID------VYMIMVKCWMIDADSRPKFRELI 273
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 140
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 201 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 249
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 250 CTID------VYMIMVKCWMIDADSRPKFRELI 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 136
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 245
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 246 CTID------VYMIMVKCWMIDADSRPKFRELI 272
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P +D GT+ YL PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 184
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 196 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 196 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P +D GT+ YL PE+I
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 185
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 186 E--KVDLWSLGVLCYEFLVGK 204
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 141
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 202 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 250
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 251 CTID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P +D GT+ YL PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 184
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 194 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 227
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 47/279 (16%)
Query: 169 LGQGGFGSVYKGQLHTG---RLIAVKMMENSKFSAEEFINELLGLCSEGFKRALVYEYMP 225
+G+G FG VY G+ H RLI ++ + A F E++ + +++
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA--FKREVMAYRQTRHENVVLFMGAC 98
Query: 226 NGSLDRHIFSKENKGQTF-----------GLEKPHEIALGTARGIEYLHNGCDVCILHFD 274
I + KG+T + K +IA +G+ YLH ILH D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 275 IKPHNILLDHNFIPKVSDFGLAKFHP-----KENDFVSISDTRGTIGYLAPELISR---- 325
+K N+ D+ + ++DFGL + D + I + G + +LAPE+I +
Sbjct: 156 LKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN--GWLCHLAPEIIRQLSPD 212
Query: 326 ---NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELR 382
+ S SDV+ G + E+ ++ ++ A W Q+ G L
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYEL-----HAREWPFKTQPAEAIIW---QMGTGMKPNLS 264
Query: 383 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
+ + +++ I L+C + +RP+ TK+++MLE
Sbjct: 265 QIG-----MGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 192 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 194 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 196 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 212 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 190 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 223
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P +D GT+ YL PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHD 189
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 142 KYRTTMQTVDNILLPEIIAVTN-HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMMENSKFS 199
K T+ DN + + +T+ +F LG+G FG V + T L AVK+++
Sbjct: 321 KTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI 380
Query: 200 AEE-------------------FINELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
++ F+ +L + V EY+ G L HI
Sbjct: 381 QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI------Q 434
Query: 241 QTFGLEKPHEI--ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 298
Q ++PH + A A G+ +L + I++ D+K N++LD K++DFG+
Sbjct: 435 QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC-- 489
Query: 299 HPKEN--DFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
KEN D V+ GT Y+APE+I+ + D + FG++L EM G+
Sbjct: 490 --KENIWDGVTTKXFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 164 HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEE-------------------F 203
+F LG+G FG V + T L AVK+++ ++ F
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 204 INELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI--ALGTARGIEY 261
+ +L + V EY+ G L HI Q ++PH + A A G+ +
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI------QQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN--DFVSISDTRGTIGYLA 319
L + I++ D+K N++LD K++DFG+ KEN D V+ GT Y+A
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIA 189
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
PE+I+ + D + FG++L EM G+
Sbjct: 190 PEIIA--YQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 200 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 192 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 197 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 198 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 189 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 196 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 194 WYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 190 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 196 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 152
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 207
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 208 YNKA---VDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 45/210 (21%)
Query: 166 THKLGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSA--------------EEFINELLGL 210
KLG G +G V + G A+K+++ S+F EE NE+ L
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 211 CS----------EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA 256
S + F+ LV E+ G L I ++ F I
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQIL 156
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISDTRG 313
GI YLH I+H DIKP NILL++ K+ DFGL+ F K+ + D G
Sbjct: 157 SGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLG 210
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVL 343
T Y+APE++ + + K DV+ G+++
Sbjct: 211 TAYYIAPEVLKKKYNE---KCDVWSCGVIM 237
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 83/211 (39%), Gaps = 48/211 (22%)
Query: 173 GFGSVYKGQLH--TGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRA------------ 218
G SV + +H TG AVK+ME +AE E L E +R
Sbjct: 105 GVSSVVRRCVHRATGHEFAVKIME---VTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 219 ---------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
LV++ M G L F + ++ I + +LH
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPEL 322
I+H D+KP NILLD N ++SDFG + P E + + GT GYLAPE+
Sbjct: 218 ANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYLAPEI 270
Query: 323 ISRNFGTV----SCKSDVYGFGMVLLEMAGG 349
+ + + D++ G++L + G
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFXEPHARFYAAQIVLTFEYLHS--- 152
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 207
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 208 YNKA---VDWWALGVLIYEMAAG 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D +++ T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 212 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 245
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 62/220 (28%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEE------------------------ 202
++G G G V+K + TG +IAVK M S E
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 203 -FIN--------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIAL 253
FI EL+G C+E K+ + G + I K + +
Sbjct: 92 TFITNTDVFIAMELMGTCAEKLKKRM------QGPIPERILGK--------------MTV 131
Query: 254 GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
+ + YL V +H D+KP NILLD K+ DFG++ + D + + G
Sbjct: 132 AIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAG 186
Query: 314 TIGYLAPELISRNFGT---VSCKSDVYGFGMVLLEMAGGR 350
Y+APE I T ++DV+ G+ L+E+A G+
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY P G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+++D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----EGMNYLE--- 131
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 132 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 192 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 240
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 241 CTID------VYMIMVKCWMIDADSRPKFRELI 267
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 48/281 (17%)
Query: 169 LGQGGFGSVYK-GQLHTGRLIAVK-MMENSKFSAEEFINEL--------------LGLCS 212
LG+G FG K TG ++ +K ++ + + F+ E+ +G+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 213 EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILH 272
+ + + EY+ G+L I S +++ + + A A G+ YLH+ + I+H
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQ---YPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 273 FDIKPHNILLDHNFIPKVSDFGLAKF------HP------KENDFVSISDTRGTIGYLAP 320
D+ HN L+ N V+DFGLA+ P K+ D G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 380
E+I N + K DV+ FG+VL E+ GR N++ + Y P + LN G L+
Sbjct: 192 EMI--NGRSYDEKVDVFSFGIVLCEII-GRVNADPD-------YLPRTMDFGLNVRGFLD 241
Query: 381 LRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 421
I + C + RPS K+ LE
Sbjct: 242 ----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRALVY------ 221
LGQG FG V K + R A+K + +++ ++E++ L S + + Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 222 ---------------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
EY N +L I S EN Q ++ + +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS-ENLNQQ--RDEYWRLFRQILEALS 130
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------SI 308
Y+H+ I+H D+KP NI +D + K+ DFGLAK + D + ++
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 309 SDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNATRSSKA 363
+ GT Y+A E++ G + K D+Y G++ EM G R + + RS
Sbjct: 188 TSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSI 246
Query: 364 YFP 366
FP
Sbjct: 247 EFP 249
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D + + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 196 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISDTRGTI 315
RG++Y+H+ +LH D+KP N+LL+ K+ DFGLA+ ++D + + T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 316 GYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ + G D++ G +L EM R
Sbjct: 197 WYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQR-------TATYITELANALSYC 128
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL N K++DFG + P + GT+ YL PE+I
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 184
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
K D++ G++ E G
Sbjct: 185 RMH--DEKVDLWSLGVLCYEFLVG 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 30/200 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMM------------------ENSKFSAEEFINELLG 209
LG G FG V G+ TG +AVK++ +N K I +L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ S +V EY+ G L +I K + + + + L ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSA---VDYCHRHM--- 131
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H D+KP N+LLD + K++DFGL+ +D + D+ G+ Y APE+IS
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRDSCGSPNYAAPEVISGRL-Y 187
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
+ D++ G++L + G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY P G + H+ + +PH A EYLH+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 160
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+++D KV+DFG AK + GT YLAPE+I S+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 215
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 216 YNKA---VDWWALGVLIYEMAAG 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 29/200 (14%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINELLGLCS----------EGF 215
+LG G FG VYK Q T L A K+++ S+ E+++ E+ L S + F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 216 ----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
++ E+ G++D + E + + + T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPELI---SRNF 327
H D+K NIL + K++DFG++ K + D+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 328 GTVSCKSDVYGFGMVLLEMA 347
K+DV+ G+ L+EMA
Sbjct: 215 RPYDYKADVWSLGITLIEMA 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCDVCILHFDIK 276
+V EY P G + H+ + +PH A EYLH+ + +++ D+K
Sbjct: 119 MVLEYAPGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLK 169
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKSD 335
P N+L+D KV+DFG AK + GT YLAPE+I S+ + D
Sbjct: 170 PENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VD 221
Query: 336 VYGFGMVLLEMAGG 349
+ G+++ EMA G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 29/200 (14%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINELLGLCS----------EGF 215
+LG G FG VYK Q T L A K+++ S+ E+++ E+ L S + F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 216 ----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
++ E+ G++D + E + + + T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDT-RGTIGYLAPELI---SRNF 327
H D+K NIL + K++DFG++ K + D+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 328 GTVSCKSDVYGFGMVLLEMA 347
K+DV+ G+ L+EMA
Sbjct: 215 RPYDYKADVWSLGITLIEMA 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P D GT+ YL PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYLPPEMIEG 183
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENS------------------KFSAEEFINELLG 209
+G+G +G V K + TGR++A+K S + E +N LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVN-LLE 91
Query: 210 LCSEGFKRALVYEYMPNGSLDR-HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+C + + LV+E++ + LD +F G + + + + + G + HN
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSHN---- 144
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
I+H DIKP NIL+ + + K+ DFG A+ + D T Y APEL+ +
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--DDEVATRWYRAPELLVGDV- 200
Query: 329 TVSCKSDVYGFGMVLLEMAGG 349
DV+ G ++ EM G
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH I HFD+KP NI+L IP K+ DFGLA H E D V + G
Sbjct: 127 GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFG 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
T ++APE++ N+ + ++D++ G++ + G
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 150
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P D GT+ YL PE+I
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYLPPEMIEG 206
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 207 RMHDE--KVDLWSLGVLCYEFLVGK 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 22/203 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV--CILHFDIK 276
+V EY G L I + Q E + ++ H D +LH D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDV 336
P N+ LD K+ DFGLA+ + DF + GT Y++PE ++R + + KSD+
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRM--SYNEKSDI 199
Query: 337 YGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW-VYDQLNKGGDLELRNVTEIESMIARKL 395
+ G +L E+ A P + + Q G + I + +L
Sbjct: 200 WSLGCLLYELC---------------ALMPPFTAFSQKELAGKIREGKFRRIPYRYSDEL 244
Query: 396 CMIGLWCIQVKAADRPSMTKVLE 418
I + +K RPS+ ++LE
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILE 267
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 41/220 (18%)
Query: 156 PEIIAVTNHFT-------HKLGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEFINEL 207
P+I+ T HFT LG+G FG+VY + I A+K++ S+ E ++L
Sbjct: 13 PDIL--TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 208 ---------------LGLCSEGFKRALVY---EYMPNGSLDRHIFSKENKGQTFGLEKPH 249
L L + + R +Y EY P G L + + K TF ++
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTA 126
Query: 250 EIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 309
I A + Y H ++H DIKP N+LL K++DFG + P +
Sbjct: 127 TIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRK 179
Query: 310 DTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT+ YL PE+I K D++ G++ E+ G
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNE--KVDLWCIGVLCYELLVG 217
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 51/274 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRL----IAVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G +A+K + S + +E ++E L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGMNYLE--- 136
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 245
Query: 385 TEIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ MI RK C + A RP +++
Sbjct: 246 CTIDVYMIMRK-------CWMIDADSRPKFRELI 272
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 45/212 (21%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRA--------- 218
+G+G F V + TG+ AVK+++ +KF++ GL +E KR
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSP------GLSTEDLKREASICHMLKH 85
Query: 219 -----------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
+V+E+M L I + + G + + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 262 LHNGCDVCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
H D I+H D+KP N+LL N P K+ DFG+A E+ V+ GT ++
Sbjct: 146 CH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA-GGRVGTPHFM 200
Query: 319 APELISRN-FGTVSCKSDVYGFGMVLLEMAGG 349
APE++ R +G DV+G G++L + G
Sbjct: 201 APEVVKREPYGK---PVDVWGCGVILFILLSG 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 90 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 142
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 197
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 198 DMWSIGVITYILLSG 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 34/202 (16%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-GTIGYLAPELISRNFG 328
++H DIKP N+LL K++DFG + P S DT GT+ YL PE+I
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEMIEGRMH 184
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 185 DE--KVDLWSLGVLCYEFLVGK 204
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 90 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 142
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 197
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 198 DMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRL----IAVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G +A+K + S + +E ++E L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +I A+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGMNYLE--- 138
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 199 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 247
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 248 CTID------VYMIMVKCWMIDADSRPKFRELI 274
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 46/212 (21%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVK--MMENSK----------------FSAEEFINELL 208
K+GQG FG V+K + TG+ +A+K +MEN K E +N L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN-LI 83
Query: 209 GLC---SEGFKRA-----LVYEYMPN--GSLDRHIFSKENKGQTFGLEKPHEIALGTARG 258
+C + + R LV+++ + L ++ K F L + + G
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNG 137
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTR-GTIG 316
+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T+
Sbjct: 138 LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 317 YLAPELI--SRNFGTVSCKSDVYGFGMVLLEM 346
Y PEL+ R++G D++G G ++ EM
Sbjct: 195 YRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVK--MMENSK---------------FSAEEFINELLG 209
K+GQG FG V+K + TG+ +A+K +MEN K E + L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 210 LC---SEGFKRA-----LVYEYMPN--GSLDRHIFSKENKGQTFGLEKPHEIALGTARGI 259
+C + + R LV+++ + L ++ K F L + + G+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGL 138
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTR-GTIGY 317
Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T+ Y
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 318 LAPELI--SRNFGTVSCKSDVYGFGMVLLEM 346
PEL+ R++G D++G G ++ EM
Sbjct: 196 RPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V TG A+K+++ K E +NE L + F
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGC 266
+V EY+P G + H+ + G +PH A EYLH+
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS-- 180
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SR 325
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 181 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 234
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 235 GYNKA---VDWWALGVLIYEMAAG 255
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 216 KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTAR---GIEYLHNGCDVCILH 272
K L+ +Y+ G L H+ +E + HE+ + +E+LH + I++
Sbjct: 133 KLHLILDYINGGELFTHLSQRERFTE-------HEVQIYVGEIVLALEHLHK---LGIIY 182
Query: 273 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-----GTIGYLAPELISRNF 327
DIK NILLD N ++DFGL+K +FV+ R GTI Y+AP+++
Sbjct: 183 RDIKLENILLDSNGHVVLTDFGLSK------EFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 328 GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA 363
D + G+++ E+ G ++ ++S+A
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVK--MMENSK---------------FSAEEFINELLG 209
K+GQG FG V+K + TG+ +A+K +MEN K E + L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 210 LC---SEGFKRA-----LVYEYMPN--GSLDRHIFSKENKGQTFGLEKPHEIALGTARGI 259
+C + + R LV+++ + L ++ K F L + + G+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGL 137
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTR-GTIGY 317
Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T+ Y
Sbjct: 138 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 318 LAPELI--SRNFGTVSCKSDVYGFGMVLLEM 346
PEL+ R++G D++G G ++ EM
Sbjct: 195 RPPELLLGERDYGP---PIDLWGAGCIMAEM 222
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 51/274 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRL----IAVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G +A+K + S + +E ++E L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGMNYLE--- 136
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 245
Query: 385 TEIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ MI RK C + A RP +++
Sbjct: 246 CTIDVYMIMRK-------CWMIDADSRPKFRELI 272
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVK--MMENSK---------------FSAEEFINELLG 209
K+GQG FG V+K + TG+ +A+K +MEN K E + L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 210 LC---SEGFKRA-----LVYEYMPN--GSLDRHIFSKENKGQTFGLEKPHEIALGTARGI 259
+C + + R LV+++ + L ++ K F L + + G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGL 138
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTR-GTIGY 317
Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T+ Y
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 318 LAPELI--SRNFGTVSCKSDVYGFGMVLLEM 346
PEL+ R++G D++G G ++ EM
Sbjct: 196 RPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 35/203 (17%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINELLGLCS----------EGF 215
+LG G FG VYK Q T L A K+++ S+ E+++ E+ L S + F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 216 ----KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
++ E+ G++D + E + + + T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISDTRGTIGYLAPELI---S 324
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMCET 211
Query: 325 RNFGTVSCKSDVYGFGMVLLEMA 347
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 164 HFTHKLGQGGFGSVY-KGQLHTGRLIAVKMMENSKFSAEE-------------------F 203
+F LG+G FG V + T L A+K+++ ++ F
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 204 INELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEI--ALGTARGIEY 261
+ +L + V EY+ G L HI Q ++P + A + G+ +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHI------QQVGKFKEPQAVFYAAEISIGLFF 135
Query: 262 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPE 321
LH I++ D+K N++LD K++DFG+ K H D V+ + GT Y+APE
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGVTTREFCGTPDYIAPE 190
Query: 322 LISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+I+ + D + +G++L EM G+
Sbjct: 191 IIA--YQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH I HFD+KP NI+L IP K+ DFGLA H E D V + G
Sbjct: 127 GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFG 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
T ++APE++ N+ + ++D++ G++ + G
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH I HFD+KP NI+L IP K+ DFGLA H E D V + G
Sbjct: 127 GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFG 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
T ++APE++ N+ + ++D++ G++ + G
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH I HFD+KP NI+L IP K+ DFGLA H E D V + G
Sbjct: 127 GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFG 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
T ++APE++ N+ + ++D++ G++ + G
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH I HFD+KP NI+L IP K+ DFGLA H E D V + G
Sbjct: 127 GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFG 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 371
T ++APE++ N+ + ++D++ G++ + G + + + A S YD
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P ++ GT+ YL PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEG 180
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 181 RMHDE--KVDLWSLGVLCYEFLVGK 203
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH I HFD+KP NI+L IP K+ DFGLA H E D V + G
Sbjct: 127 GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFG 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
T ++APE++ N+ + ++D++ G++ + G
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 159 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVK-MMENSKFSAEEF-----------INE 206
IA TN +G G FG V++ +L +A+K ++++ +F E ++
Sbjct: 40 IAYTN--CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 207 LLGLCSEGFKR-----ALVYEYMPNG--SLDRHIFSKENKGQTFGLEKPHEIALGTARGI 259
S G K+ LV EY+P RH ++K + L K + L R +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQL--LRSL 154
Query: 260 EYLHNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
Y+H+ + I H DIKP N+LLD + + K+ DFG AK VS +R Y
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYR 208
Query: 319 APELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 350
APELI FG + + D++ G V+ E+ G+
Sbjct: 209 APELI---FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
L G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 195 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 243
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 244 CTID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 14/92 (15%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS----ISDTR 312
+GIEYLH I+H DIKP N+L+ + K++DFG++ N+F +S+T
Sbjct: 148 KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVS------NEFKGSDALLSNTV 198
Query: 313 GTIGYLAPELISRNFGTVSCKS-DVYGFGMVL 343
GT ++APE +S S K+ DV+ G+ L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
L G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 141
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 202 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 250
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 251 CTID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 169 LGQGGFGS-VYKGQLHTGRLIAVKMMENSKFS-----------AEEFINELLGLCSEGFK 216
LG G G+ VY+G + R +AVK + FS ++E N + C+E
Sbjct: 32 LGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEK-D 89
Query: 217 RALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
R Y + + + ++ GLE P + T G+ +LH+ + I+H D+K
Sbjct: 90 RQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHS---LNIVHRDLK 145
Query: 277 PHNILLD----HNFIPK-VSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELISRN 326
PHNIL+ H I +SDFGL K + F S GT G++APE++S +
Sbjct: 146 PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRL----IAVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G +A+K + S + +E ++E L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGMNYLE--- 136
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 245
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 246 CTID------VYMIMVKCWMIDADSRPKFRELI 272
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 189 AVKMMENSKFSAEEFINELL------------GLCSEGFKRALVYEYMPNGSLDRHIFSK 236
AVK+++ SK E I LL + +G LV E M G L I
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR- 114
Query: 237 ENKGQTFGLEKPHEIALGT-ARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KVS 291
Q F E+ L T + +EYLH+ ++H D+KP NIL +D + P ++
Sbjct: 115 ----QKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRIC 167
Query: 292 DFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
DFG AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 168 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRL----IAVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G +A+K + S + +E ++E L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGMNYLE--- 134
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 195 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 243
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 244 CTID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 189 AVKMMENSKFSAEEFINELL------------GLCSEGFKRALVYEYMPNGSLDRHIFSK 236
AVK+++ SK E I LL + +G LV E M G L I
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR- 114
Query: 237 ENKGQTFGLEKPHEIALGT-ARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KVS 291
Q F E+ L T + +EYLH+ ++H D+KP NIL +D + P ++
Sbjct: 115 ----QKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRIC 167
Query: 292 DFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
DFG AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 168 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRLI----AVKMME--NSKFSAEEFINE--------------L 207
L G FG+VYKG + G + A+K + S + +E ++E L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +IA +G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA----KGMNYLE--- 141
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 202 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 250
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 251 CTID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 169 LGQGGFGSVY-KGQLHTGRLIAVKMMENSKF----SAEEFINELLGLCSEGF-------- 215
LG G FG V + TG A+K+++ K E +NE L + F
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 216 ------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCD 267
+V EY+ G + H+ + +PH A EYLH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS--- 159
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRN 326
+ +++ D+KP N+L+D +V+DFG AK + GT YLAPE+I S+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKG 214
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G+++ EMA G
Sbjct: 215 YNKA---VDWWALGVLIYEMAAG 234
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 125
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + H + ++S GT+ YL PE+I
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLS---GTLDYLPPEMIEG 181
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 182 RMH--DEKVDLWSLGVLCYEFLVGK 204
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 111/292 (38%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 105 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 263 HNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 221 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 260
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 261 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 16/135 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
L+ E + G L + KE+ + E+ E G+ YLH+ + I HFD+KP
Sbjct: 91 LIGELVAGGELFDFLAEKESLTE----EEATEFLKQILNGVYYLHS---LQIAHFDLKPE 143
Query: 279 NILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKS 334
NI+L +P K+ DFGLA N+F +I GT ++APE++ N+ + ++
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIV--NYEPLGLEA 198
Query: 335 DVYGFGMVLLEMAGG 349
D++ G++ + G
Sbjct: 199 DMWSIGVITYILLSG 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 169 LGQGGFGSVYKG-QLHTGRL----IAVKMME--NSKFSAEEFINE--------------L 207
LG G FG+VYKG + G +A+K + S + +E ++E L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFS-KENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LG+C + L+ + MP G L ++ K+N G + L +I A+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----AKGMNYLE--- 141
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
D ++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 327 FGTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 202 IYT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPI 250
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
I+ + MI + C + A RP +++
Sbjct: 251 CTID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 41/207 (19%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF--------------------INEL 207
K+G+G +G VYK + GR++A+K + + AE+ I L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH-EIAL-GTARGIEYLHNG 265
+ + LV+E+M D ENK GL+ +I L RG+ + H
Sbjct: 85 IDVIHSERCLTLVFEFMEK---DLKKVLDENKT---GLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-- 323
ILH D+KP N+L++ + K++DFGLA+ S + T+ Y AP+++
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGGR 350
S+ + T D++ G + EM G+
Sbjct: 194 SKKYST---SVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 41/207 (19%)
Query: 168 KLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSAEEF--------------------INEL 207
K+G+G +G VYK + GR++A+K + + AE+ I L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPH-EIAL-GTARGIEYLHNG 265
+ + LV+E+M D ENK GL+ +I L RG+ + H
Sbjct: 85 IDVIHSERCLTLVFEFMEK---DLKKVLDENKT---GLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-- 323
ILH D+KP N+L++ + K++DFGLA+ S + T+ Y AP+++
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGGR 350
S+ + T D++ G + EM G+
Sbjct: 194 SKKYST---SVDIWSIGCIFAEMITGK 217
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 187
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 188 E--KVDLWSLGVLCYEFLVGK 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 111/292 (38%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 99 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 263 HNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 215 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 254
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 255 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 183
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 123
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 179
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 180 RMH--DEKVDLWSLGVLCYEFLVGK 202
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN-----------------SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK + SKF+ + +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 98 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 263 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 214 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 253
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 254 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 111/292 (38%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 115 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 263 HNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 231 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 270
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 271 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G ++ + K F ++ TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQR-------TATYITELANALSYC 129
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEG 185
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 186 RMH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN-----------------SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK + SKF+ + +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 113 -CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 263 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 229 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 268
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 269 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 90 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 142
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S+++ T Y+APE++ SC
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCYTPYYVAPEVLGPEKYDKSC- 198
Query: 334 SDVYGFGMVL 343
D++ G+++
Sbjct: 199 -DMWSLGVIM 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 184
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 111/292 (38%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 125 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 263 HNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 241 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMPY-----PSKSNQE 280
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 281 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEG 180
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN-----------------SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK + SKF+ + +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 98 -CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 263 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 214 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 253
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 254 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN-----------------SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK + SKF+ + +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 113 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 263 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 229 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 268
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 269 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 189
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 111/292 (38%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 99 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 263 HNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 215 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 254
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 255 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 121
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 177
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 178 RMH--DEKVDLWSLGVLCYEFLVGK 200
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMIEG 180
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 143 YRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLH--TGRLIAVKMMENSKFSA 200
+R ++Q D + E I V G SV K +H T AVK+++ SK
Sbjct: 14 HRNSIQFTDGYEVKEDIGV-----------GSYSVCKRCIHKATNMEFAVKIIDKSKRDP 62
Query: 201 EEFINELL------------GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKP 248
E I LL + +G +V E M G L I Q F E+
Sbjct: 63 TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR-----QKFFSERE 117
Query: 249 HEIALGT-ARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KVSDFGLAKFHPKEN 303
L T + +EYLH ++H D+KP NIL +D + P ++ DFG AK EN
Sbjct: 118 ASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 304 DFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ T ++APE++ R +C D++ G++L M G
Sbjct: 175 GLLMTPCY--TANFVAPEVLERQGYDAAC--DIWSLGVLLYTMLTG 216
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN-----------------SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK + SKF+ + +
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 90 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 263 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + + ++
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 206 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 245
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 246 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G ++ + K F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 189
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 130
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 186
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 187 E--KVDLWSLGVLCYEFLVGK 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 128
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P + GT+ YL PE+I
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 184
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 185 RMH--DEKVDLWSLGVLCYEFLVGK 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 30/200 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMM------------------ENSKFSAEEFINELLG 209
LG G FG V G+ TG +AVK++ +N K I +L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ S +V EY+ G L +I K + + + + L ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSA---VDYCHRHM--- 131
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC--GSPNYAAPEVISGRL-Y 187
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
+ D++ G++L + G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEG 180
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 164 HFTHKLGQGGFGSVYKGQLHTGRLI-AVKMMENS---KFSAEEFI----NELLGLCSEGF 215
HF +G+G FG V + + AVK+++ K E+ I N LL F
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 216 ------------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
K V +Y+ G L H+ + + F + A A + YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGYLH 156
Query: 264 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
+ + I++ D+KP NILLD ++DFGL K + + N + S GT YLAPE++
Sbjct: 157 S---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVL 211
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ D + G VL EM G
Sbjct: 212 HKQ--PYDRTVDWWCLGAVLYEMLYG 235
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 141
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEG 197
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 198 RMHDE--KVDLWSLGVLCYEFLVGK 220
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 139 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 263 HNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + ++
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 255 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 294
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 295 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 148 QTVDNILLPEIIAVTNHFT--HKLGQGGFGSVYKGQLHT--GRLI--AVKMMENSKFSA- 200
+ ++++L+PE FT LG+G FGSV + QL G + AVKM++ ++
Sbjct: 13 EKLEDVLIPE-----QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS 67
Query: 201 --EEFINE--------------LLGLCSEGFKRA------LVYEYMPNGSLDRHIFSKEN 238
EEF+ E L+G+ + ++ +M +G L + +
Sbjct: 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI 127
Query: 239 KGQTFGL--EKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 296
F L + + A G+EYL + +H D+ N +L + V+DFGL+
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 297 KFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ + + ++ + +LA E ++ N TV SDV+ FG+ + E+
Sbjct: 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTV--HSDVWAFGVTMWEI 232
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 150
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEG 206
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 207 RMHDE--KVDLWSLGVLCYEFLVGK 229
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 183
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEG 183
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 184 RMHDE--KVDLWSLGVLCYEFLVGK 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 58/292 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVK--------------MMEN---SKFSAEEFIN 205
LG G FG VY+GQ+ + +AVK +ME SKF+ + +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 206 ELLGLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 116 -CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 263 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLA 319
+H DI N LL + K+ DFG+A+ + + + ++
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 320 PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 379
PE G + K+D + FG++L E+ S Y P +K
Sbjct: 232 PEAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQE 271
Query: 380 ELRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 272 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
LV+E M GS+ HI +K + F + + A +++LHN I H D+KP
Sbjct: 88 LVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPE 140
Query: 279 NILLDH--NFIP-KVSDFGLAKFHPKENDFVSISDTR-----GTIGYLAPELI---SRNF 327
NIL +H P K+ DFGL D IS G+ Y+APE++ S
Sbjct: 141 NILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
+ D++ G++L + G
Sbjct: 201 SIYDKRCDLWSLGVILYILLSG 222
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH+ I HFD+KP NI+L +P K+ DFG+A N+F +I G
Sbjct: 120 GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---G 173
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMV 342
T ++APE++ N+ + ++D++ G++
Sbjct: 174 TPEFVAPEIV--NYEPLGLEADMWSIGVI 200
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK ++ GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH+ I HFD+KP NI+L +P K+ DFG+A N+F +I G
Sbjct: 127 GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---G 180
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
T ++APE++ N+ + ++D++ G++ + G
Sbjct: 181 TPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K++DFG + P GT+ YL PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 180
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTRG 313
G+ YLH+ I HFD+KP NI+L +P K+ DFG+A N+F +I G
Sbjct: 141 GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---G 194
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMV 342
T ++APE++ N+ + ++D++ G++
Sbjct: 195 TPEFVAPEIV--NYEPLGLEADMWSIGVI 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 33/201 (16%)
Query: 167 HKLGQGGFG-SVYKGQLHTGRLIAVKMMENSKFSA---EEFINELLGLCS---------- 212
K+G+G FG ++ GR +K + S+ S+ EE E+ L +
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 213 EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E F+ +V +Y G L + I ++ KG F ++ + + ++++H D
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVH---DR 144
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG---YLAPELISR 325
ILH DIK NI L + ++ DFG+A+ N V ++ R IG YL+PE+
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELA--RACIGTPYYLSPEICEN 199
Query: 326 NFGTVSCKSDVYGFGMVLLEM 346
+ KSD++ G VL E+
Sbjct: 200 K--PYNNKSDIWALGCVLYEL 218
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 109/291 (37%), Gaps = 56/291 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN--SKFSAEEFINELL------------ 208
LG G FG VY+GQ+ + +AVK + S+ +F+ E L
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 209 --GLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 264 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 380
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 381 LRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 136 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 188
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S++ T Y+APE++ SC
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC- 244
Query: 334 SDVYGFGMVL 343
D++ G+++
Sbjct: 245 -DMWSLGVIM 253
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 142 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 194
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S++ T Y+APE++ SC
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC- 250
Query: 334 SDVYGFGMVL 343
D++ G+++
Sbjct: 251 -DMWSLGVIM 259
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 90 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 142
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S++ T Y+APE++ SC
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC- 198
Query: 334 SDVYGFGMVL 343
D++ G+++
Sbjct: 199 -DMWSLGVIM 207
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
+V E + G L I ++ Q F + EI I+YLH+ + I H D+KP
Sbjct: 96 IVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 279 NILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L N I K++DFG AK N S++ T Y+APE++ SC D
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--D 205
Query: 336 VYGFGMVL 343
++ G+++
Sbjct: 206 MWSLGVIM 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 92 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S++ T Y+APE++ SC
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC- 200
Query: 334 SDVYGFGMVL 343
D++ G+++
Sbjct: 201 -DMWSLGVIM 209
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 233 IFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDH---NFI 287
+FS+ +++G Q F + EI I+YLH+ + I H D+KP N+L N I
Sbjct: 107 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAI 163
Query: 288 PKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVL 343
K++DFG AK N S++ T Y+APE++ SC D++ G+++
Sbjct: 164 LKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIM 214
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
+V E + G L I ++ Q F + EI I+YLH+ + I H D+KP
Sbjct: 91 IVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 279 NILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L N I K++DFG AK N S++ T Y+APE++ SC D
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--D 200
Query: 336 VYGFGMVL 343
++ G+++
Sbjct: 201 MWSLGVIM 208
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
G+ YLH I+H D+KP N+LL + + + K+ DFGL+ + + + GT
Sbjct: 148 GVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGT 201
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
Y+APE++ + + K DV+ G++L + G
Sbjct: 202 AYYIAPEVLRKKYDE---KCDVWSIGVILFILLAG 233
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
+V E + G L I ++ Q F + EI I+YLH+ + I H D+KP
Sbjct: 106 IVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 279 NILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L N I K++DFG AK N S++ T Y+APE++ SC D
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--D 215
Query: 336 VYGFGMVL 343
++ G+++
Sbjct: 216 MWSLGVIM 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 109/291 (37%), Gaps = 56/291 (19%)
Query: 169 LGQGGFGSVYKGQLH------TGRLIAVKMMEN--SKFSAEEFINELL------------ 208
LG G FG VY+GQ+ + +AVK + S+ +F+ E L
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 209 --GLCSEGFKRALVYEYMPNGSLD---RHIFSKENKGQTFGLEKPHEIALGTARGIEYLH 263
G+ + R ++ E M G L R + ++ + + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 264 NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAP 320
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 321 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 380
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 381 LRNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 426
L VT M K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 92 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S++ T Y+APE++ SC
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC- 200
Query: 334 SDVYGFGMVL 343
D++ G+++
Sbjct: 201 -DMWSLGVIM 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
+V E + G L I ++ Q F + EI I+YLH+ + I H D+KP
Sbjct: 98 IVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 279 NILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L N I K++DFG AK N S++ T Y+APE++ SC D
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--D 207
Query: 336 VYGFGMVL 343
++ G+++
Sbjct: 208 MWSLGVIM 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 42/208 (20%)
Query: 168 KLGQGGFGSVYKGQ--LHTGRLIAVKMM------ENSKFSA----------EEF----IN 205
++G+G +G V+K + + GR +A+K + E S E F +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 206 ELLGLCS-----EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTARG 258
L +C+ K LV+E++ D+ + + +K G+ E ++ RG
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-----DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+++LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYR 186
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 251 IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND------ 304
I L A +E+LH+ ++H D+KP NI + + KV DFGL ++ +
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 305 ----FVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ + GT Y++PE I N + S K D++ G++L E+
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 47/239 (19%)
Query: 139 LIHKYRTTMQTVDNILLP----EIIAVTNHFTHKLGQGGFGSVYKGQL----HTGRLIAV 190
+ +Y+ T+ + ++ + E++ V +G+G FG V QL T ++ A+
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEVVKV-------IGRGAFGEV---QLVRHKSTRKVYAM 104
Query: 191 KMME--------NSKFSAEE----------FINELLGLCSEGFKRALVYEYMPNGSLDRH 232
K++ +S F EE ++ +L + +V EYMP G L +
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VN 163
Query: 233 IFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSD 292
+ S + + + E+ L ++ +H+ + +H D+KP N+LLD + K++D
Sbjct: 164 LMSNYDVPEKWARFYTAEVVLA----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 216
Query: 293 FGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT--VSCKSDVYGFGMVLLEMAGG 349
FG KE V GT Y++PE++ G + D + G+ L EM G
Sbjct: 217 FGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEFINEL---------------LGLCS 212
LG+G FG+VY + + I A+K++ S+ E ++L L + +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 213 EGFKRALVY---EYMPNGSL----DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
R +Y E+ P G L +H E + TF E A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 131
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
+ ++H DIKP N+L+ + K++DFG + P + GT+ YL PE+I
Sbjct: 132 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
T K D++ G++ E G
Sbjct: 187 K--THDEKVDLWCAGVLCYEFLVG 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 42/208 (20%)
Query: 168 KLGQGGFGSVYKGQ--LHTGRLIAVKMM------ENSKFSA----------EEF----IN 205
++G+G +G V+K + + GR +A+K + E S E F +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 206 ELLGLCS-----EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTARG 258
L +C+ K LV+E++ D+ + + +K G+ E ++ RG
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-----DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+++LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYR 186
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK K + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK-RVKGRTWX----LXGTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 47/239 (19%)
Query: 139 LIHKYRTTMQTVDNILLP----EIIAVTNHFTHKLGQGGFGSVYKGQL----HTGRLIAV 190
+ +Y+ T+ + ++ + E++ V +G+G FG V QL T ++ A+
Sbjct: 50 FLSRYKDTINKIRDLRMKAEDYEVVKV-------IGRGAFGEV---QLVRHKSTRKVYAM 99
Query: 191 KMME--------NSKFSAEE----------FINELLGLCSEGFKRALVYEYMPNGSLDRH 232
K++ +S F EE ++ +L + +V EYMP G L +
Sbjct: 100 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VN 158
Query: 233 IFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSD 292
+ S + + + E+ L ++ +H+ + +H D+KP N+LLD + K++D
Sbjct: 159 LMSNYDVPEKWARFYTAEVVLA----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 211
Query: 293 FGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT--VSCKSDVYGFGMVLLEMAGG 349
FG KE V GT Y++PE++ G + D + G+ L EM G
Sbjct: 212 FGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISDTR 312
G+ YLH I+H D+KP NILL + P K+ DFG+++ K + +
Sbjct: 142 EGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR---KIGHACELREIM 194
Query: 313 GTIGYLAPELISRNFGTVSCKSDVYGFGMV 342
GT YLAPE++ N+ ++ +D++ G++
Sbjct: 195 GTPEYLAPEIL--NYDPITTATDMWNIGII 222
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 119 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 168
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 220
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 221 DWWALGVLIYEMAAG 235
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEFINEL---------------LGLCS 212
LG+G FG+VY + + I A+K++ S+ E ++L L + +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 213 EGFKRALVY---EYMPNGSL----DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
R +Y E+ P G L +H E + TF E A + Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 132
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
+ ++H DIKP N+L+ + K++DFG + P + GT+ YL PE+I
Sbjct: 133 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 187
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
T K D++ G++ E G
Sbjct: 188 K--THDEKVDLWCAGVLCYEFLVG 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 22/203 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV--CILHFDIK 276
+V EY G L I + Q E + ++ H D +LH D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDV 336
P N+ LD K+ DFGLA+ + F GT Y++PE ++R + + KSD+
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM--SYNEKSDI 199
Query: 337 YGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW-VYDQLNKGGDLELRNVTEIESMIARKL 395
+ G +L E+ A P + + Q G + I + +L
Sbjct: 200 WSLGCLLYELC---------------ALMPPFTAFSQKELAGKIREGKFRRIPYRYSDEL 244
Query: 396 CMIGLWCIQVKAADRPSMTKVLE 418
I + +K RPS+ ++LE
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILE 267
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 47/239 (19%)
Query: 139 LIHKYRTTMQTVDNILLP----EIIAVTNHFTHKLGQGGFGSVYKGQL----HTGRLIAV 190
+ +Y+ T+ + ++ + E++ V +G+G FG V QL T ++ A+
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEVVKV-------IGRGAFGEV---QLVRHKSTRKVYAM 104
Query: 191 KMME--------NSKFSAEE----------FINELLGLCSEGFKRALVYEYMPNGSLDRH 232
K++ +S F EE ++ +L + +V EYMP G L +
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VN 163
Query: 233 IFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSD 292
+ S + + + E+ L ++ +H+ + +H D+KP N+LLD + K++D
Sbjct: 164 LMSNYDVPEKWARFYTAEVVLA----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 216
Query: 293 FGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT--VSCKSDVYGFGMVLLEMAGG 349
FG KE V GT Y++PE++ G + D + G+ L EM G
Sbjct: 217 FGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 42/208 (20%)
Query: 168 KLGQGGFGSVYKGQ--LHTGRLIAVKMM------ENSKFSA----------EEF----IN 205
++G+G +G V+K + + GR +A+K + E S E F +
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 206 ELLGLCS-----EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGL--EKPHEIALGTARG 258
L +C+ K LV+E++ D+ + + +K G+ E ++ RG
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-----DQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 259 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
+++LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYR 186
Query: 319 APELISRNFGTVSCKSDVYGFGMVLLEM 346
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEFINEL---------------LGLCS 212
LG+G FG+VY + + I A+K++ S+ E ++L L + +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 213 EGFKRALVY---EYMPNGSL----DRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNG 265
R +Y E+ P G L +H E + TF E A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 131
Query: 266 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
+ ++H DIKP N+L+ + K++DFG + P + GT+ YL PE+I
Sbjct: 132 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
T K D++ G++ E G
Sbjct: 187 K--THDEKVDLWCAGVLCYEFLVG 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 270 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR 325
++H DIKP N+LL K+++FG + P + GT+ YL PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 183
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 130
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K+++FG + P + GT+ YL PE+I
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 186
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 187 E--KVDLWSLGVLCYEFLVGK 205
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCDVCILHFDIK 276
+V EY+ G + H+ + +PH A EYLH+ + +++ D+K
Sbjct: 118 MVMEYVAGGEMFSHL------RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLK 168
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKSD 335
P N+L+D +V+DFG AK + GT YLAPE+I S+ + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VD 220
Query: 336 VYGFGMVLLEMAGG 349
+ G+++ EMA G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISDTRG 313
RG++Y+H+ ++H D+KP N+L++ N K+ DFG+A+ P E+ + +++
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVA 225
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRR 351
T Y APEL+ + + D++ G + EM R+
Sbjct: 226 TRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFG-LAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H D+KP NI L K+ DFG L + V D R Y+APEL+ ++G
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----YMAPELLQGSYG 233
Query: 329 TVSCKSDVYGFGMVLLEMA 347
T +DV+ G+ +LE+A
Sbjct: 234 TA---ADVFSLGLTILEVA 249
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISDTRG 313
RG++Y+H+ ++H D+KP N+L++ N K+ DFG+A+ P E+ + +++
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVA 224
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRR 351
T Y APEL+ + + D++ G + EM R+
Sbjct: 225 TRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 22/203 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV--CILHFDIK 276
+V EY G L I + Q E + ++ H D +LH D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDV 336
P N+ LD K+ DFGLA+ + F GT Y++PE ++R + + KSD+
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRM--SYNEKSDI 199
Query: 337 YGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW-VYDQLNKGGDLELRNVTEIESMIARKL 395
+ G +L E+ A P + + Q G + I + +L
Sbjct: 200 WSLGCLLYELC---------------ALMPPFTAFSQKELAGKIREGKFRRIPYRYSDEL 244
Query: 396 CMIGLWCIQVKAADRPSMTKVLE 418
I + +K RPS+ ++LE
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILE 267
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 45/201 (22%)
Query: 168 KLGQGGFGSVYKG-QLHTGRLIAVKMMEN----SKFSAEEFIN--------ELLGL---C 211
+LG G FG V++ + TGR+ K + K++ + I+ +L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV--- 268
+ ++ L+ E++ G L I +++ K + A I Y+ C+
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYK-------------MSEAEVINYMRQACEGLKH 164
Query: 269 ----CILHFDIKPHNILLDHNFIP--KVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPE 321
I+H DIKP NI+ + K+ DFGLA K +P E + T T + APE
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAPE 220
Query: 322 LISRNFGTVSCKSDVYGFGMV 342
++ R V +D++ G++
Sbjct: 221 IVDRE--PVGFYTDMWAIGVL 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 164 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSA---EEFINELLGLCSEGFKRALV 220
H K+G+G +G VYK Q + G A+K + K I E+ + E +V
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREI-SILKELKHSNIV 63
Query: 221 YEYMPNGSLDRHIFSKENKGQTF---------GLEK--PHEIALGTARGIEYLHNGCDVC 269
Y + R + E+ Q GLE L GI Y H D
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRR 120
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELI--SR 325
+LH D+KP N+L++ K++DFGLA+ P I T+ Y AP+++ S+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSK 176
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ T D++ G + EM G
Sbjct: 177 KYSTT---IDIWSVGCIFAEMVNG 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCDVCILHFDIK 276
+V EY+ G + H+ + +PH A EYLH+ + +++ D+K
Sbjct: 113 MVMEYVAGGEMFSHL------RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLK 163
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKSD 335
P N+L+D +V+DFG AK + GT YLAPE+I S+ + D
Sbjct: 164 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VD 215
Query: 336 VYGFGMVLLEMAGG 349
+ G+++ EMA G
Sbjct: 216 WWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 27/203 (13%)
Query: 164 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSA---EEFINELLGLCSEGFKRALV 220
H K+G+G +G VYK Q + G A+K + K I E+ + E +V
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREI-SILKELKHSNIV 63
Query: 221 YEYMPNGSLDRHIFSKENKGQTF---------GLEK--PHEIALGTARGIEYLHNGCDVC 269
Y + R + E+ Q GLE L GI Y H D
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRR 120
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPELI--SRN 326
+LH D+KP N+L++ K++DFGLA+ F + + T+ Y AP+++ S+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY---THEVVTLWYRAPDVLMGSKK 177
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ T D++ G + EM G
Sbjct: 178 YSTT---IDIWSVGCIFAEMVNG 197
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHE--IALGTARGIEYLHNGCDVCILHFDIK 276
+V EY+ G + H+ + +PH A EYLH+ + +++ D+K
Sbjct: 105 MVMEYVAGGEMFSHL------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLK 155
Query: 277 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKSD 335
P N+L+D +V+DFG AK + GT YLAPE+I S+ + D
Sbjct: 156 PENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VD 207
Query: 336 VYGFGMVLLEMAGG 349
+ G+++ EMA G
Sbjct: 208 WWALGVLIYEMAAG 221
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 27/203 (13%)
Query: 164 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMMENSKFSA---EEFINELLGLCSEGFKRALV 220
H K+G+G +G VYK Q + G A+K + K I E+ + E +V
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREI-SILKELKHSNIV 63
Query: 221 YEYMPNGSLDRHIFSKENKGQTF---------GLEK--PHEIALGTARGIEYLHNGCDVC 269
Y + R + E+ Q GLE L GI Y H D
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRR 120
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIGYLAPELI--SRN 326
+LH D+KP N+L++ K++DFGLA+ F + + T+ Y AP+++ S+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY---THEVVTLWYRAPDVLMGSKK 177
Query: 327 FGTVSCKSDVYGFGMVLLEMAGG 349
+ T D++ G + EM G
Sbjct: 178 YSTT---IDIWSVGCIFAEMVNG 197
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
T +G++YLHN ++H D+K N+ L+ + K+ DFGLA E D D GT
Sbjct: 135 TIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGT 189
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 374
Y+APE++ + S + D++ G +L + G+ + + + Y ++
Sbjct: 190 PNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIK 239
Query: 375 KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
K R++ + S + R++ + RPS+ ++L
Sbjct: 240 KNEYSVPRHINPVASALIRRM-------LHADPTLRPSVAELL 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S GT
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMV 342
GY+APE++++ S D + G++
Sbjct: 182 PGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 139 MVMEYVAGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDL 188
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 240
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 241 DWWALGVLIYEMAAG 255
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 26/200 (13%)
Query: 168 KLGQGGFGSVYKGQ-LHTGRLIAVKMME-----NSKFSAE-----EFINEL--------L 208
K+G+G F VY+ L G +A+K ++ ++K A+ + + +L
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E + +V E G L R I + + + + + +E++H+
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-- 156
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
++H DIKP N+ + + K+ D GL +F + + GT Y++PE I N
Sbjct: 157 -VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHEN-- 211
Query: 329 TVSCKSDVYGFGMVLLEMAG 348
+ KSD++ G +L EMA
Sbjct: 212 GYNFKSDIWSLGCLLYEMAA 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S GT
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMV 342
GY+APE++++ S D + G++
Sbjct: 182 PGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 34/202 (16%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
LG+G FG V K + T + AVK++ + ++ I +L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
+ +V E G L F + K + F I GI Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 271 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
+H D+KP NILL + + K+ DFGL+ + + D GT Y+APE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR--- 196
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 34/199 (17%)
Query: 165 FTHKLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF----------------INEL 207
F LG G F V + T +L+A+K + +E I L
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 208 LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEK-PHEIALGTARGIEYLHNGC 266
+ G L+ + + G L I K F E+ + ++YLH
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLH--- 133
Query: 267 DVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
D+ I+H D+KP N+L LD + +SDFGL+K E+ +S GT GY+APE++
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 324 SRNFGTVSCKSDVYGFGMV 342
++ S D + G++
Sbjct: 191 AQK--PYSKAVDCWSIGVI 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 169 LGQGGFGSVYKGQLHTGRLI-AVKMMENSKFSAEEF------------------INELLG 209
LG+G FG+VY + + I A+K++ ++ I L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ + L+ EY P G++ R + K F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
++H DIKP N+LL K++DFG + P + GT+ YL PE I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRXHD 189
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 34/202 (16%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
LG+G FG V K + T + AVK++ + ++ I +L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
+ +V E G L F + K + F I GI Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 271 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
+H D+KP NILL + + K+ DFGL+ + + D GT Y+APE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR--- 196
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S GT
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMV 342
GY+APE++++ S D + G++
Sbjct: 182 PGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 169 LGQGGFGSVYKGQLHT--GRLIAVKMMENSKFSAEEF------------------INELL 208
LG+G FG V K HT G+ +A+K++ + + I +L
Sbjct: 12 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+ + +V EY N D +I ++ + ++ +EY H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSE----QEARRFFQQIISAVEYCHRHK-- 123
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
I+H D+KP N+LLD + K++DFGL+ N + + G+ Y APE+IS
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKL- 178
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
+ DV+ G++L M R
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRR 200
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 148 QTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVK----------MMENSK 197
Q++ N+++ E I LG G G+V GR +AVK +ME
Sbjct: 11 QSLKNLVVSEKI---------LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL 61
Query: 198 FS-AEEFINELLGLCSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEK---PHEIA 252
+ +++ N + CSE R L + + N +L + SK + L+K P +
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKF 298
A G+ +LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 122 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 299 HPKENDF-VSISDTRGTIGYLAPELI--SRNFGT---VSCKSDVYGFGMVL 343
++ F ++++ GT G+ APEL+ S N T ++ D++ G V
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
LV++ M G L ++ K T ++ +I I LH + I+H D+KP
Sbjct: 88 LVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPE 140
Query: 279 NILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI----SRNFGTVSCK 333
NILLD + K++DFG + + P E + + GT YLAPE+I + N +
Sbjct: 141 NILLDDDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKE 196
Query: 334 SDVYGFGMVLLEMAGG 349
D++ G+++ + G
Sbjct: 197 VDMWSTGVIMYTLLAG 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
GI Y+H I+H D+KP NILL + + K+ DFGL+ + + D GT
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGT 186
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
Y+APE++ GT K DV+ G++L + G
Sbjct: 187 AYYIAPEVLR---GTYDEKCDVWSAGVILYILLSG 218
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 192
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 193 TSASDVWMFGVCMWEI 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
T +G++YLHN ++H D+K N+ L+ + K+ DFGLA E D D GT
Sbjct: 151 TIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGT 205
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 374
Y+APE++ + S + D++ G +L + G+ + + + Y ++
Sbjct: 206 PNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIK 255
Query: 375 KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
K R++ + S + R++ + RPS+ ++L
Sbjct: 256 KNEYSVPRHINPVASALIRRM-------LHADPTLRPSVAELL 291
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 191
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 192 TSASDVWMFGVCMWEI 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 169 LGQGGFGSVYKGQLHT--GRLIAVKMMENSKFSAEEF------------------INELL 208
LG+G FG V K HT G+ +A+K++ + + I +L
Sbjct: 16 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+ + +V EY N D +I ++ + ++ +EY H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSE----QEARRFFQQIISAVEYCHRHK-- 127
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
I+H D+KP N+LLD + K++DFGL+ N + + G+ Y APE+IS
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKL- 182
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
+ DV+ G++L M R
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRR 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 139 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 188
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK K + GT YLAPE+I S+ +
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAK-RVKGATWTLC----GTPEYLAPEIILSKGYNKA---V 240
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 241 DWWALGVLIYEMAAG 255
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 136 IVXECLDGGEL----FSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVK 188
Query: 277 PHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCK 333
P N+L N I K++DFG AK N S++ T Y+APE++ SC
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC- 244
Query: 334 SDVYGFGMV 342
D + G++
Sbjct: 245 -DXWSLGVI 252
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 169 LGQGGFGSVYKGQLHT--GRLIAVKMMENSKFSAEEF------------------INELL 208
LG+G FG V K HT G+ +A+K++ + + I +L
Sbjct: 21 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+ + +V EY N D +I ++ + ++ +EY H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSE----QEARRFFQQIISAVEYCHRHK-- 132
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
I+H D+KP N+LLD + K++DFGL+ N + + G+ Y APE+IS
Sbjct: 133 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKL- 187
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
+ DV+ G++L M R
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRR 209
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 169 LGQGGFGSVYKGQLHT--GRLIAVKMMENSKFSAEEF------------------INELL 208
LG+G FG V K HT G+ +A+K++ + + I +L
Sbjct: 22 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+ + +V EY N D +I ++ + ++ +EY H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSE----QEARRFFQQIISAVEYCHRHK-- 133
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
I+H D+KP N+LLD + K++DFGL+ N + + G+ Y APE+IS
Sbjct: 134 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKL- 188
Query: 329 TVSCKSDVYGFGMVLLEMAGGR 350
+ DV+ G++L M R
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRR 210
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPE-LISRNFGTVSCKS 334
KP N+++D +V+DFG AK + GT YLAPE +IS+ +
Sbjct: 168 KPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIISKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 194
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 195 TSASDVWMFGVCMWEI 210
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
LV++ M G L F + T ++ +I I LH + I+H D+KP
Sbjct: 101 LVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPE 153
Query: 279 NILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI----SRNFGTVSCK 333
NILLD + K++DFG + + P E + + GT YLAPE+I + N +
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 334 SDVYGFGMVLLEMAGG 349
D++ G+++ + G
Sbjct: 210 VDMWSTGVIMYTLLAG 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 217
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 218 TSASDVWMFGVCMWEI 233
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 186
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 187 TSASDVWMFGVCMWEI 202
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 45/212 (21%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRA--------- 218
+G+G F V + TG+ AVK+++ +KF++ GL +E KR
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP------GLSTEDLKREASICHMLKH 85
Query: 219 -----------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
+V+E+M L I + + G + + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 262 LHNGCDVCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
H D I+H D+KPH +LL N P K+ FG+A E+ V+ GT ++
Sbjct: 146 CH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFM 200
Query: 319 APELISRN-FGTVSCKSDVYGFGMVLLEMAGG 349
APE++ R +G DV+G G++L + G
Sbjct: 201 APEVVKREPYGK---PVDVWGCGVILFILLSG 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 239 KGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 298
K Q E + RG++Y+H+ I+H D+KP N+ ++ + ++ DFGLA+
Sbjct: 124 KSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ 180
Query: 299 HPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAT 358
+E ++ T Y APE++ N+ + D++ G ++ E+ G
Sbjct: 181 ADEE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQG--------- 225
Query: 359 RSSKAYFPSWVY-DQLNK 375
KA FP Y DQL +
Sbjct: 226 ---KALFPGSDYIDQLKR 240
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 189
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 190 TSASDVWMFGVCMWEI 205
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 189
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 190 TSASDVWMFGVCMWEI 205
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 251 IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND------ 304
I + A +E+LH+ ++H D+KP NI + + KV DFGL ++ +
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 305 ----FVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ + GT Y++PE I N S K D++ G++L E+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFEL 269
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 147 MQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-- 203
++ VD E+ T+ +LG+G FG V++ + TG AVK + F AEE
Sbjct: 62 LKPVDYEYREEVHWATHQL--RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA 119
Query: 204 --------INELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGT 255
I L G EG + E + GSL + + K Q E LG
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLGQ 174
Query: 256 A-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PKVSDFGLAK-FHPK--ENDFVSISD 310
A G+EYLH+ ILH D+K N+LL + + DFG A P D ++
Sbjct: 175 ALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 311 TRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT ++APE++ + K DV+ ++L M G
Sbjct: 232 IPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 268
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 198
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 199 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 39/211 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAVKMMENS----------------KFSAEEFINELLGLC 211
LG+G + V L G+ AVK++E + + I EL+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+ + LV+E + GS+ HI K + F + + A +++LH I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTKG---IA 133
Query: 272 HFDIKPHNILLD--HNFIP-KVSDFGLAKFHPKENDFVSISDTR-----GTIGYLAPELI 323
H D+KP NIL + P K+ DF L N I+ G+ Y+APE++
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 324 -----SRNFGTVSCKSDVYGFGMVLLEMAGG 349
F C D++ G+VL M G
Sbjct: 194 EVFTDQATFYDKRC--DLWSLGVVLYIMLSG 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ +MA G
Sbjct: 220 DWWALGVLIYQMAAG 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 216
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ N+ + D++ G ++ E+ GR
Sbjct: 217 YRAPEIM-LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 45/212 (21%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRA--------- 218
+G+G F V + TG+ AVK+++ +KF++ GL +E KR
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP------GLSTEDLKREASICHMLKH 87
Query: 219 -----------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
+V+E+M L I + + G + + Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 262 LHNGCDVCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYL 318
H D I+H D+KPH +LL N P K+ FG+A E+ V+ GT ++
Sbjct: 148 CH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFM 202
Query: 319 APELISRN-FGTVSCKSDVYGFGMVLLEMAGG 349
APE++ R +G DV+G G++L + G
Sbjct: 203 APEVVKREPYGK---PVDVWGCGVILFILLSG 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 37/199 (18%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLIAVKMMENSKFSAEEF-----------------INELL 208
+LG+G F SV + +H TG A K++ K SA +F I L
Sbjct: 12 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCD 267
E LV++ + G L I ++E + +I I Y H NG
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAYCHSNG-- 124
Query: 268 VCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H ++KP N+LL K++DFGLA + ND + GT GYL+PE++
Sbjct: 125 --IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 325 RNFGTVSCKSDVYGFGMVL 343
++ S D++ G++L
Sbjct: 180 KD--PYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 37/199 (18%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLIAVKMMENSKFSAEEF-----------------INELL 208
+LG+G F SV + +H TG A K++ K SA +F I L
Sbjct: 13 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCD 267
E LV++ + G L I ++E + +I I Y H NG
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAYCHSNG-- 125
Query: 268 VCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H ++KP N+LL K++DFGLA + ND + GT GYL+PE++
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 325 RNFGTVSCKSDVYGFGMVL 343
++ S D++ G++L
Sbjct: 181 KD--PYSKPVDIWACGVIL 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 41/206 (19%)
Query: 169 LGQGGFGSVY--KGQLHTGRLIAVKMMEN----SKFSAEEFINELLGLCS---------- 212
LG+G FG V K ++ TG+ AVK++ K E + E+ L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 213 EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E F+ LV E G L I S++ F I GI Y+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 146
Query: 269 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
I+H D+KP N+LL D N ++ DFGL+ + D GT Y+APE++
Sbjct: 147 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 200
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 201 ---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 135 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 186
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 187 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 194
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 172 GGFGSVYKGQ-LHTGRLIAVKMME-NSKFSAEEFINELLGLCS----------EGF---- 215
G FG VYK Q T L A K+++ S+ E+++ E+ L S + F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 216 KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDI 275
++ E+ G++D + E + + + T + YLH D I+H D+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 134
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG---YLAPELI---SRNFGT 329
K NIL + K++DFG++ +N I IG ++APE++ +
Sbjct: 135 KAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 330 VSCKSDVYGFGMVLLEMA 347
K+DV+ G+ L+EMA
Sbjct: 191 YDYKADVWSLGITLIEMA 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + ++ DFGLA+ +E ++ T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRW 193
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 375
Y APE++ N+ + D++ G ++ E+ G KA FP Y DQL +
Sbjct: 194 YRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 240
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
LV+E M GS+ HI +K + F + + A +++LHN I H D+KP
Sbjct: 88 LVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPE 140
Query: 279 NILLDH--NFIP-KVSDFGLAKFHPKENDFVSISDTR-----GTIGYLAPELI---SRNF 327
NIL +H P K+ DF L D IS G+ Y+APE++ S
Sbjct: 141 NILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
+ D++ G++L + G
Sbjct: 201 SIYDKRCDLWSLGVILYILLSG 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 569
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 570 TSASDVWMFGVCMWEI 585
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 200 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 43/227 (18%)
Query: 148 QTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVK----------MMENSK 197
Q++ N+++ E I LG G G+V GR +AVK +ME
Sbjct: 29 QSLKNLVVSEKI---------LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL 79
Query: 198 FS-AEEFINELLGLCSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEK---PHEIA 252
+ +++ N + CSE R L + + N +L + SK + L+K P +
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKF 298
A G+ +LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 140 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 299 HPKENDF-VSISDTRGTIGYLAPELISRNFGTVSCKS-DVYGFGMVL 343
+ F ++++ GT G+ APEL+ + +S D++ G V
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 146 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 197
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 198 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 200 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 200 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + ++ DFGLA+ +E ++ T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRW 185
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 375
Y APE++ N+ + D++ G ++ E+ G KA FP Y DQL +
Sbjct: 186 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 43/227 (18%)
Query: 148 QTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVK----------MMENSK 197
Q++ N+++ E I LG G G+V GR +AVK +ME
Sbjct: 29 QSLKNLVVSEKI---------LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL 79
Query: 198 FS-AEEFINELLGLCSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEK---PHEIA 252
+ +++ N + CSE R L + + N +L + SK + L+K P +
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKF 298
A G+ +LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 140 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 299 HPKENDF-VSISDTRGTIGYLAPELISRNFGTVSCKS-DVYGFGMVL 343
+ F ++++ GT G+ APEL+ + +S D++ G V
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 37/199 (18%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLIAVKMMENSKFSAEEF-----------------INELL 208
+LG+G F SV + +H TG A K++ K SA +F I L
Sbjct: 13 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCD 267
E LV++ + G L I ++E + +I I Y H NG
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAYCHSNG-- 125
Query: 268 VCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H ++KP N+LL K++DFGLA + ND + GT GYL+PE++
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 325 RNFGTVSCKSDVYGFGMVL 343
++ S D++ G++L
Sbjct: 181 KD--PYSKPVDIWACGVIL 197
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 198
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 199 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 184
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 185 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 184
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 185 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
LV++ M G L F + T ++ +I I LH + I+H D+KP
Sbjct: 101 LVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPE 153
Query: 279 NILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI----SRNFGTVSCK 333
NILLD + K++DFG + + P E + GT YLAPE+I + N +
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDPGEK----LRSVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 334 SDVYGFGMVLLEMAGG 349
D++ G+++ + G
Sbjct: 210 VDMWSTGVIMYTLLAG 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 52/243 (21%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEFINELLGLCSEGFKRALVY------ 221
LGQG FG V K + R A+K + +++ ++E+ L S + + Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 222 ---------------------EYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIE 260
EY N +L I S EN Q ++ + +
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS-ENLNQQ--RDEYWRLFRQILEALS 130
Query: 261 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-------- 312
Y+H+ I+H ++KP NI +D + K+ DFGLAK + D + +
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 313 ----GTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNATRSSKA 363
GT Y+A E++ G + K D Y G++ E G R + + RS
Sbjct: 188 TSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSI 246
Query: 364 YFP 366
FP
Sbjct: 247 EFP 249
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 134 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 185
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 186 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 206
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 207 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 207
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 208 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 210
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 211 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 206
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 207 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 207
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ N+ + D++ G ++ E+ GR
Sbjct: 208 YRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFINE----------------LLGL- 210
+G+G + V +L T R+ A+K+++ + +E I+ L+GL
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 211 -CSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
C + R V EY+ G L H+ + + EI+L + YLH +
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 140
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNF 327
I++ D+K N+LLD K++D+G+ K + D + S GT Y+APE++ ++
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 198
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
G D + G+++ EM GR
Sbjct: 199 G---FSVDWWALGVLMFEMMAGR 218
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 36/183 (19%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKF------SAEEF----------INELLGLC 211
LGQG +V++G+ TG L A+K+ N F EF I +L +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 212 SEGFKR--ALVYEYMPNGSLDRHIFSKENKGQTFGL-EKPHEIAL-GTARGIEYLH-NGC 266
E R L+ E+ P GSL + E +GL E I L G+ +L NG
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 267 DVCILHFDIKPHNILL----DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPEL 322
I+H +IKP NI+ D + K++DFG A+ + FVS+ GT YL P++
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---GTEEYLHPDM 186
Query: 323 ISR 325
R
Sbjct: 187 YER 189
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
+V EYMP G L ++ S + + + E+ L ++ +H+ + ++H D+KP
Sbjct: 152 MVMEYMPGGDL-VNLMSNYDVPEKWAKFYTAEVVLA----LDAIHS---MGLIHRDVKPD 203
Query: 279 NILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT--VSCKSDV 336
N+LLD + K++DFG E V GT Y++PE++ G + D
Sbjct: 204 NMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 337 YGFGMVLLEMAGG 349
+ G+ L EM G
Sbjct: 263 WSVGVFLFEMLVG 275
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFINE----------------LLGL- 210
+G+G + V +L T R+ A+K+++ + +E I+ L+GL
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 211 -CSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
C + R V EY+ G L H+ + + EI+L + YLH +
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 125
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNF 327
I++ D+K N+LLD K++D+G+ K + D + S GT Y+APE++ ++
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 183
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
G D + G+++ EM GR
Sbjct: 184 G---FSVDWWALGVLMFEMMAGR 203
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 47/231 (20%)
Query: 148 QTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVK----------MMENSK 197
Q++ N+++ E I LG G G+V GR +AVK +ME
Sbjct: 11 QSLKNLVVSEKI---------LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKL 61
Query: 198 FS-AEEFINELLGLCSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEK---PHEIA 252
+ +++ N + CSE R L + + N +L + SK + L+K P +
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 253 LGTARGIEYLHNGCDVCILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKF 298
A G+ +LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 122 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 299 HPKENDF-VSISDTRGTIGYLAPELI--SRNFGT---VSCKSDVYGFGMVL 343
+ F ++++ GT G+ APEL+ S N T ++ D++ G V
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ +++ TR
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---W 183
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E + T
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRW 207
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 208 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E + T
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRW 210
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE++ N+ + D++ G ++ E+ GR
Sbjct: 211 YRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 41/206 (19%)
Query: 169 LGQGGFGSVY--KGQLHTGRLIAVKMMEN----SKFSAEEFINELLGLCS---------- 212
LG+G FG V K ++ TG+ AVK++ K E + E+ L
Sbjct: 40 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 213 EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E F+ LV E G L I S++ F I GI Y+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 152
Query: 269 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
I+H D+KP N+LL D N ++ DFGL+ + D GT Y+APE++
Sbjct: 153 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 206
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 207 H---GTYDEKCDVWSTGVILYILLSG 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT YLAP +I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPAIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEEFINE----------------LLGL- 210
+G+G + V +L T R+ A+K+++ + +E I+ L+GL
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 211 -CSEGFKRAL-VYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
C + R V EY+ G L H+ + + EI+L + YLH +
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 129
Query: 269 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNF 327
I++ D+K N+LLD K++D+G+ K + D + S GT Y+APE++ ++
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 187
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
G D + G+++ EM GR
Sbjct: 188 G---FSVDWWALGVLMFEMMAGR 207
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 165 FTHKLGQGGFG--SVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCS------EGFK 216
F +G G FG + + +L T L+AVK +E E E++ S FK
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 217 R--------ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
A++ EY G L I N G+ F ++ G+ Y H+ +
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERIC---NAGR-FSEDEARFFFQQLLSGVSYCHS---M 135
Query: 269 CILHFDIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISDTRGTIGYLAPELI 323
I H D+K N LLD + P K+ DFG +K H + V GT Y+APE++
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVL 189
Query: 324 SRNF--GTVSCKSDVYGFGMVLLEMAGG 349
R G + +DV+ G+ L M G
Sbjct: 190 LRQEYDGKI---ADVWSCGVTLYVMLVG 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 37/199 (18%)
Query: 168 KLGQGGFGSVYKGQLH--TGRLIAVKMMENSKFSAEEF-----------------INELL 208
+LG+G F SV + +H TG A K++ K SA +F I L
Sbjct: 36 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCD 267
E LV++ + G L I ++E + +I I Y H NG
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAYCHSNG-- 148
Query: 268 VCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H ++KP N+LL K++DFGLA + ND + GT GYL+PE++
Sbjct: 149 --IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLK 203
Query: 325 RNFGTVSCKSDVYGFGMVL 343
++ S D++ G++L
Sbjct: 204 KD--PYSKPVDIWACGVIL 220
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 41/206 (19%)
Query: 169 LGQGGFGSVY--KGQLHTGRLIAVKMMEN----SKFSAEEFINELLGLCS---------- 212
LG+G FG V K ++ TG+ AVK++ K E + E+ L
Sbjct: 57 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 213 EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E F+ LV E G L I S++ F I GI Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 169
Query: 269 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
I+H D+KP N+LL D N ++ DFGL+ + D GT Y+APE++
Sbjct: 170 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 223
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 224 ---HGTYDEKCDVWSTGVILYILLSG 246
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 42/226 (18%)
Query: 143 YRTTMQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQLH--TGRLIAVKMMENSKFSA 200
+R ++Q D + E I V G SV K +H T AVK+++ SK
Sbjct: 14 HRNSIQFTDGYEVKEDIGV-----------GSYSVCKRCIHKATNXEFAVKIIDKSKRDP 62
Query: 201 EEFINELL------------GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKP 248
E I LL + +G +V E G L I Q F E+
Sbjct: 63 TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR-----QKFFSERE 117
Query: 249 HEIALGT-ARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KVSDFGLAKFHPKEN 303
L T + +EYLH ++H D+KP NIL +D + P ++ DFG AK EN
Sbjct: 118 ASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 304 DFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
+ T ++APE++ R +C D++ G++L G
Sbjct: 175 GLLXTPCY--TANFVAPEVLERQGYDAAC--DIWSLGVLLYTXLTG 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ D+GLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ N K+ DFGL+++ +++ S + I ++APE I NF
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESI--NFRRF 189
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 190 TSASDVWMFGVCMWEI 205
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 166 THKLGQGGFGSVYKG-QLHTGRLIAVKMME---NSKFSAEEFINELLGLCSEGFKR--AL 219
TH +G G +GSV +G +A+K + S+ A+ ELL L + L
Sbjct: 30 TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 220 VYEYMPNGSLDRHIFS------------KENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
+ + P SL R+ + ++ G F EK + +G++Y+H+
Sbjct: 89 LDVFTPASSL-RNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG- 146
Query: 268 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNF 327
++H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE+I ++
Sbjct: 147 --VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVI-LSW 198
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR 350
+ D++ G ++ EM G+
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVS 331
H D+KP NIL+ + + DFG+A E + +T GT+ Y APE S + T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTLYYXAPERFSESHATY- 214
Query: 332 CKSDVYGFGMVLLEMAGG 349
++D+Y VL E G
Sbjct: 215 -RADIYALTCVLYECLTG 231
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 155 LPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMME---NSKFSAEEFINELLGL 210
LP+ H +G G +GSV +G +A+K + S+ A+ ELL L
Sbjct: 40 LPKTYVSPTH----VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLL 95
Query: 211 CSEGFKR--ALVYEYMPNGSLDRHIFS------------KENKGQTFGLEKPHEIALGTA 256
+ L+ + P SL R+ + ++ G F EK +
Sbjct: 96 KHMQHENVIGLLDVFTPASSL-RNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML 154
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
+G++Y+H+ ++H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRW 206
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE+I ++ + D++ G ++ EM G+
Sbjct: 207 YRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 41/206 (19%)
Query: 169 LGQGGFGSVY--KGQLHTGRLIAVKMMEN----SKFSAEEFINELLGLCS---------- 212
LG+G FG V K ++ TG+ AVK++ K E + E+ L
Sbjct: 58 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 213 EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E F+ LV E G L I S++ F I GI Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 170
Query: 269 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
I+H D+KP N+LL D N ++ DFGL+ + D GT Y+APE++
Sbjct: 171 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 224
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 225 ---HGTYDEKCDVWSTGVILYILLSG 247
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
V EY+ G L H+ + + EI+L + YLH + I++ D+K
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ERGIIYRDLKLD 182
Query: 279 NILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKSDVY 337
N+LLD K++D+G+ K + D + S GT Y+APE++ ++G D +
Sbjct: 183 NVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYG---FSVDWW 237
Query: 338 GFGMVLLEMAGGR 350
G+++ EM GR
Sbjct: 238 ALGVLMFEMMAGR 250
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHN--FIPKVSDFGLAKFHPKEN--DFVSISDTRG 313
+ YLHN I H DIKP N L N F K+ DFGL+K K N ++ ++ G
Sbjct: 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 314 TIGYLAPELISRNFGTVSCKSDVYGFGMVL 343
T ++APE+++ + K D + G++L
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 165 FTHKLGQGGFGSVY-KGQLHTGRLIAVKMMENS-KFSAEEFINELLGLCSEGFKRALVYE 222
F LG G F V+ Q TG+L A+K ++ S F NE+ L + + E
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 223 YMPNGSLDRHIFSK-ENKGQTF------GLEKPHEIALGTAR---GIEYLH-NGCDVCIL 271
+ + ++ + + G+ F G+ + +L + ++YLH NG I+
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG----IV 128
Query: 272 HFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFG 328
H D+KP N+L + N ++DFGL+K ++N +S + GT GY+APE++++
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTA--CGTPGYVAPEVLAQK-- 182
Query: 329 TVSCKSDVYGFGMV 342
S D + G++
Sbjct: 183 PYSKAVDCWSIGVI 196
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFG-LEKPHE--IALGTARGIEYLHNGCDVCILHFDI 275
+V EY+ G + H+ + G +PH A EYLH+ + +++ D+
Sbjct: 118 MVMEYVAGGEMFSHL-------RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDL 167
Query: 276 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNFGTVSCKS 334
KP N+L+D +V+DFG AK + GT LAPE+I S+ +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEALAPEIILSKGYNKA---V 219
Query: 335 DVYGFGMVLLEMAGG 349
D + G+++ EMA G
Sbjct: 220 DWWALGVLIYEMAAG 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL-GXKY 180
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
S D++ G + EM R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 38/200 (19%)
Query: 168 KLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSA--------EEFINELL---------- 208
+LG+G F V + ++ TG+ A K++ K SA E I LL
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCD 267
+ EGF LV++ + G L I ++E + +I + + H NG
Sbjct: 71 SISEEGF-HYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL----ESVNHCHLNG-- 123
Query: 268 VCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H D+KP N+LL K++DFGLA + D + GT GYL+PE++
Sbjct: 124 --IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 325 RN-FGTVSCKSDVYGFGMVL 343
++ +G D++ G++L
Sbjct: 180 KDPYGK---PVDMWACGVIL 196
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 189
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 190 TSASDVWMFGVCMWEI 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DFGL + E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 38/200 (19%)
Query: 168 KLGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSA--------EEFINELL---------- 208
+LG+G F V + ++ TG+ A K++ K SA E I LL
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLH-NGCD 267
+ EGF LV++ + G L I ++E + +I + + H NG
Sbjct: 71 SISEEGF-HYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL----ESVNHCHLNG-- 123
Query: 268 VCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H D+KP N+LL K++DFGLA + D + GT GYL+PE++
Sbjct: 124 --IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 325 RN-FGTVSCKSDVYGFGMVL 343
++ +G D++ G++L
Sbjct: 180 KDPYGK---PVDMWACGVIL 196
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLSFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 147 MQTVDNILLPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-- 203
++ VD E+ T+ +LG+G FG V++ + TG AVK + F AEE
Sbjct: 81 LKPVDYEYREEVHWATHQL--RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA 138
Query: 204 --------INELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGT 255
I L G EG + E + GSL + + K Q E LG
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLGQ 193
Query: 256 A-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PKVSDFGLAK-FHPK--ENDFVSISD 310
A G+EYLH+ ILH D+K N+LL + + DFG A P ++
Sbjct: 194 ALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 311 TRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT ++APE++ + K DV+ ++L M G
Sbjct: 251 IPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 287
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
T +G++YLHN ++H D+K N+ L+ + K+ DFGLA E D GT
Sbjct: 151 TIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKTLCGT 205
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 374
Y+APE++ + S + D++ G +L + G+ + + + Y ++
Sbjct: 206 PNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIK 255
Query: 375 KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
K R++ + S + R++ + RPS+ ++L
Sbjct: 256 KNEYSVPRHINPVASALIRRM-------LHADPTLRPSVAELL 291
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
T +G++YLHN ++H D+K N+ L+ + K+ DFGLA E D GT
Sbjct: 151 TIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGT 205
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 374
Y+APE++ + S + D++ G +L + G+ + + + Y ++
Sbjct: 206 PNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIK 255
Query: 375 KGGDLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
K R++ + S + R++ + RPS+ ++L
Sbjct: 256 KNEYSVPRHINPVASALIRRM-------LHADPTLRPSVAELL 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 122
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 38/200 (19%)
Query: 168 KLGQGGFGSVYK------GQLHTGRLIAVKMM---ENSKFSAEEFINELL---------- 208
+LG+G F V + Q + ++I K + ++ K E I LL
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 209 GLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
+ EGF LV++ + G L I ++E + H+I + ++H
Sbjct: 98 SISEEGF-HYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL----ESVNHIHQHD-- 150
Query: 269 CILHFDIKPHNILLD---HNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELIS 324
I+H D+KP N+LL K++DFGLA + ++ + + GT GYL+PE++
Sbjct: 151 -IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA---GTPGYLSPEVLR 206
Query: 325 RN-FGTVSCKSDVYGFGMVL 343
++ +G D++ G++L
Sbjct: 207 KDPYGK---PVDIWACGVIL 223
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 164 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKM--------MENSKFSAEEFINELLGLCS-- 212
H K+G G FGSV+K + G + A+K ++ E + + +LG S
Sbjct: 10 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 69
Query: 213 --------EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHN 264
E + EY GSL I F + ++ L RG+ Y+H+
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSISD------T 311
+ ++H DIKP NI + IP + D+ K K D ++
Sbjct: 130 ---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 186
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
G +LA E++ N+ T K+D++ + ++ AG
Sbjct: 187 EGDSRFLANEVLQENY-THLPKADIFALALTVVXAAGA 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 239 KGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 298
K + G ++ + +G+ Y+H I+H D+KP N+ ++ + K+ DFGLA+
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ 177
Query: 299 HPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
E + T Y APE+I N+ + D++ G ++ EM G+
Sbjct: 178 ADSEMXGXVV-----TRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 41/206 (19%)
Query: 169 LGQGGFGSVY--KGQLHTGRLIAVKMMEN----SKFSAEEFINELLGLCS---------- 212
LG+G FG V K ++ TG+ AVK++ K E + E+ L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 213 EGFKRA----LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDV 268
E F+ LV E G L I S++ F I GI Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYXHKNK-- 146
Query: 269 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI 323
I+H D+KP N+LL D N ++ DFGL+ D GT Y+APE++
Sbjct: 147 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KXKDKIGTAYYIAPEVL 200
Query: 324 SRNFGTVSCKSDVYGFGMVLLEMAGG 349
GT K DV+ G++L + G
Sbjct: 201 ---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 122
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 77 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 130
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL-LGXKY 187
Query: 330 VSCKSDVYGFGMVLLEMAGGR 350
S D++ G + EM R
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 176
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H DI N+L+ K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRF 569
Query: 331 SCKSDVYGFGMVLLEM 346
+ SDV+ FG+ + E+
Sbjct: 570 TSASDVWMFGVCMWEI 585
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 74 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 127
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 179
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 54/234 (23%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT--GRLIAVKMMEN---------SKFSAEEFIN 205
++++ LG+G FG V + H GR +AVK+++N S+ E +N
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 206 -----------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG 254
++L +V+E + + D F KEN F L+ ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQ 126
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHN-----FIPKVS--------------DFGL 295
+ + +LH+ + H D+KP NIL + + PK+ DFG
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 296 AKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
A + + + S T Y APE+I + C DV+ G +L+E G
Sbjct: 184 ATYDDEHH-----STLVSTRHYRAPEVILALGWSQPC--DVWSIGCILIEYYLG 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 77 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 130
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 182
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 122
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 174
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 175 --LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
++ E M G L I +E Q F + EI I++LH+ I H D+KP
Sbjct: 84 IIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 279 NILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L + + + K++DFG A KE ++ T Y+APE++ SC D
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFA----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC--D 192
Query: 336 VYGFGMVL 343
++ G+++
Sbjct: 193 MWSLGVIM 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 219 LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIKPH 278
++ E M G L I +E Q F + EI I++LH+ I H D+KP
Sbjct: 103 IIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 279 NILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSCKSD 335
N+L + + + K++DFG A KE ++ T Y+APE++ SC D
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFA----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC--D 211
Query: 336 VYGFGMVL 343
++ G+++
Sbjct: 212 MWSLGVIM 219
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 122
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 174
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 175 --LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ S+D F + L +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ S+D F + L +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ D GLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ FGLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ S+D F + L +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ S+D F + L +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 48/218 (22%)
Query: 165 FTHKLGQGGFGSVYKG---------QLHTGRLI------AVKMMENSKFSAEEFINEL-- 207
F LGQG F ++KG QLH ++ A + S F A +++L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 208 ------LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
G+C G + LV E++ GSLD ++ K+NK L K E+A A + +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWK-LEVAKQLAAAMHF 128
Query: 262 LHNGCDVCILHFDIKPHNILL---------DHNFIPKVSDFGLA-KFHPKENDFVSISDT 311
L ++H ++ NILL + FI K+SD G++ PK+ I
Sbjct: 129 LEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD-----ILQE 179
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
R I ++ PE I N ++ +D + FG L E+ G
Sbjct: 180 R--IPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ D GLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 125
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ DF LA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 74 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 127
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 179
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 180 --LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 124
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 149
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S GT+ Y+ PE I SR
Sbjct: 150 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSR 207
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 164 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKM--------MENSKFSAEEFINELLGLCS-- 212
H K+G G FGSV+K + G + A+K ++ E + + +LG S
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 71
Query: 213 --------EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHN 264
E + EY GSL I F + ++ L RG+ Y+H+
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSISD------T 311
+ ++H DIKP NI + IP + D+ K K D ++
Sbjct: 132 ---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 188
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
G +LA E++ N+ T K+D++ + ++ AG
Sbjct: 189 EGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 225
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 164 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKM--------MENSKFSAEEFINELLGLCS-- 212
H K+G G FGSV+K + G + A+K ++ E + + +LG S
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 71
Query: 213 --------EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHN 264
E + EY GSL I F + ++ L RG+ Y+H+
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSISD------T 311
+ ++H DIKP NI + IP + D+ K K D ++
Sbjct: 132 ---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 188
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
G +LA E++ N+ T K+D++ + ++ AG
Sbjct: 189 EGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 34/200 (17%)
Query: 164 HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMMENSKFSAEE--FINELLGLCSEGFKRA-- 218
F LG G F V + TG+L AVK + +E NE+ L +
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 219 ------------LVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTA-RGIEYLHNG 265
LV + + G L I K F EK + + YLH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEK-----GFYTEKDASTLIRQVLDAVYYLHR- 138
Query: 266 CDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPEL 322
+ I+H D+KP N+L D +SDFGL+K K + +S GT GY+APE+
Sbjct: 139 --MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEV 193
Query: 323 ISRNFGTVSCKSDVYGFGMV 342
+++ S D + G++
Sbjct: 194 LAQK--PYSKAVDCWSIGVI 211
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 47/210 (22%)
Query: 161 VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMMENSKFSAEEFINELLGLCS----- 212
V +H+ +LG G FG V++ + TG A K + S +E + + + S
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP 214
Query: 213 ----------EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+ + ++YE+M G L + + NK + +EY+
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-------------MSEDEAVEYM 261
Query: 263 HNGCD-VC------ILHFDIKPHNILL--DHNFIPKVSDFGL-AKFHPKENDFVSISDTR 312
C +C +H D+KP NI+ + K+ DFGL A PK+ S+ T
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTT 317
Query: 313 GTIGYLAPELISRNFGTVSCKSDVYGFGMV 342
GT + APE+ V +D++ G++
Sbjct: 318 GTAEFAAPEVAEGK--PVGYYTDMWSVGVL 345
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 133
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S GT+ Y+ PE I SR
Sbjct: 134 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSR 191
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 48/218 (22%)
Query: 165 FTHKLGQGGFGSVYKG---------QLHTGRLI------AVKMMENSKFSAEEFINEL-- 207
F LGQG F ++KG QLH ++ A + S F A +++L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 208 ------LGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY 261
G+C G + LV E++ GSLD ++ K+NK L K E+A A + +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWK-LEVAKQLAWAMHF 128
Query: 262 LHNGCDVCILHFDIKPHNILL---------DHNFIPKVSDFGLA-KFHPKENDFVSISDT 311
L ++H ++ NILL + FI K+SD G++ PK+ I
Sbjct: 129 LEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD-----ILQE 179
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
R I ++ PE I N ++ +D + FG L E+ G
Sbjct: 180 R--IPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 169 LGQGGFGSVYKG-QLHTGRLIAVKMMENSKFSA--------EEFINELL----------G 209
+G+G F V + +L TG A K++ K SA E I LL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ EGF LV++ + G L I ++E + +I +E + + +
Sbjct: 72 ISEEGF-HYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI-------LEAVLHCHQMG 123
Query: 270 ILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
++H D+KP N+LL K++DFGLA + D + GT GYL+PE++ +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 327 -FGTVSCKSDVYGFGMVL 343
+G D++ G++L
Sbjct: 182 AYGK---PVDIWACGVIL 196
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 177
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S GT+ Y+ PE I SR
Sbjct: 178 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSR 235
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 126 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 178
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVL 343
T YLAPE L+S + D + G++L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 125 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 177
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVL 343
T YLAPE L+S + D + G++L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIG 316
RG++Y+H+ I+H D+KP N+ ++ + K+ D GLA+ E ++ T
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRW 187
Query: 317 YLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y APE I N+ + D++ G ++ E+ GR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 126 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 178
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVL 343
T YLAPE L+S + D + G++L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 126 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 178
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVL 343
T YLAPE L+S + D + G++L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 47/210 (22%)
Query: 161 VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMMENSKFSAEEFINELLGLCS----- 212
V +H+ +LG G FG V++ + TG A K + S +E + + + S
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP 108
Query: 213 ----------EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYL 262
+ + ++YE+M G L + + NK + +EY+
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-------------MSEDEAVEYM 155
Query: 263 HNGCD-VC------ILHFDIKPHNILL--DHNFIPKVSDFGL-AKFHPKENDFVSISDTR 312
C +C +H D+KP NI+ + K+ DFGL A PK+ S+ T
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTT 211
Query: 313 GTIGYLAPELISRNFGTVSCKSDVYGFGMV 342
GT + APE+ V +D++ G++
Sbjct: 212 GTAEFAAPEVAEGK--PVGYYTDMWSVGVL 239
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 129
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S GT+ Y+ PE I SR
Sbjct: 130 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSR 187
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 164 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKM--------MENSKFSAEEFINELLGLCS-- 212
H K+G G FGSV+K + G + A+K ++ E + + +LG S
Sbjct: 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 73
Query: 213 --------EGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHN 264
E + EY GSL I F + ++ L RG+ Y+H+
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSISD------T 311
+ ++H DIKP NI + IP + D+ K K D ++
Sbjct: 134 ---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 190
Query: 312 RGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
G +LA E++ N+ T K+D++ + ++ AG
Sbjct: 191 EGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 227
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 73 VIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGG 349
+ PE+++R + D++ G ++ EM G
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIA---VKMMENSKFSAEEFINE--------------LLG 209
K+G+G +G VYK + TG ++A +++ ++ I E LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIA---VKMMENSKFSAEEFINE--------------LLG 209
K+G+G +G VYK + TG ++A +++ ++ I E LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + + G L K + L +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 122
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 31/208 (14%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 149
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-----SRN 326
H D+KP N L+ + K+ DFG+A + V GT+ Y+ PE I SR
Sbjct: 150 HSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 327 FG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+L+DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 132 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 184
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVL 343
T YLAPE L+S + D + G++L
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 130
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S GT+ Y+ PE I SR
Sbjct: 131 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSR 188
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
G YLH I+H D+KP N+LL+ + + K+ DFGL+ + + GT
Sbjct: 116 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGT 169
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVL 343
Y+APE++ + + K DV+ G++L
Sbjct: 170 AYYIAPEVLRKKYDE---KCDVWSCGVIL 195
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 164 HFTHKLGQGGFGSVY-KGQLHTGRLIAVKMMENSKFSAEEFINELLGLCS------EGFK 216
H KLG G F +V+ + + +A+K++++++ E ++E+ L S
Sbjct: 24 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 83
Query: 217 RALVYEYMP-------NGS--------LDRHIFSKENKGQTFGLEKP--HEIALGTARGI 259
R +V + + NG+ L H+ K GL P +I +G+
Sbjct: 84 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGL 143
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHN 285
+YLH C I+H DIKP NILL N
Sbjct: 144 DYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 265 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 317
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVLL 344
T YLAPE L+S + D + G++L
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + G L K + L +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 126
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISDTRGT 314
G YLH I+H D+KP N+LL+ + + K+ DFGL+ + + GT
Sbjct: 133 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGT 186
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVL 343
Y+APE++ + + K DV+ G++L
Sbjct: 187 AYYIAPEVLRKKYDE---KCDVWSCGVIL 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 28/124 (22%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDF 170
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G+++ E
Sbjct: 171 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 346 MAGG 349
M G
Sbjct: 218 MIKG 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 37/206 (17%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + G L K + L +G+ + H+
Sbjct: 69 VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 122
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGT 329
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 330 VSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 258 GIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISDTRG 313
++YLH NG I+H D+KP N+LL + + + K++DFG +K + + ++ G
Sbjct: 251 AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 303
Query: 314 TIGYLAPE-LISRNFGTVSCKSDVYGFGMVLL 344
T YLAPE L+S + D + G++L
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 41/208 (19%)
Query: 168 KLGQGGFGSVYKGQLH-TGRLIAVKMM------ENSKFSAEEFIN-----------ELLG 209
K+G+G +G VYK + TG ++A+K + E +A I+ +LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
+ K LV+E++ + L + + G L K + L +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR--- 123
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISDTRGTIGYLAPELISRNF 327
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 328 GTVSCK-----SDVYGFGMVLLEMAGGR 350
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 164 HFTHKLGQGGFGSVY-KGQLHTGRLIAVKMMENSKFSAEEFINELLGLCS------EGFK 216
H KLG G F +V+ + + +A+K++++++ E ++E+ L S
Sbjct: 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99
Query: 217 RALVYEYMP-------NGS--------LDRHIFSKENKGQTFGLEKP--HEIALGTARGI 259
R +V + + NG+ L H+ K GL P +I +G+
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGL 159
Query: 260 EYLHNGCDVCILHFDIKPHNILLDHN 285
+YLH C I+H DIKP NILL N
Sbjct: 160 DYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 28/124 (22%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDF 170
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G+++ E
Sbjct: 171 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 346 MAGG 349
M G
Sbjct: 218 MIKG 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR---NF 327
+H DIKP N+LLD N +++DFG + ++ V S GT Y++PE++
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR---------RNSNMNATRSSKAYFPSWVYDQLNKGGD 378
G + D + G+ + EM G + FPS V D + D
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 315
Query: 379 LELRNVTEIESMIAR 393
L R + E + +
Sbjct: 316 LIQRLICSRERRLGQ 330
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 141 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 193
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 194 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 224
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 177
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S GT+ Y+ PE I SR
Sbjct: 178 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSR 235
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G +YLH ++H D+K N+ L+ + K+ DFGLA E D GT Y
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNY 183
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+APE++S+ S + DV+ G ++ + G+
Sbjct: 184 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAK-FHPKENDFVSISDTRGT 314
RG++Y+H+ +LH D+KP N+ ++ + + K+ DFGLA+ P + +S+ T
Sbjct: 131 RGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 315 IGYLAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
Y +P L+S N T + D++ G + EM G+
Sbjct: 188 KWYRSPRLLLSPNNYTKAI--DMWAAGCIFAEMLTGK 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G +YLH ++H D+K N+ L+ + K+ DFGLA E D GT Y
Sbjct: 133 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNY 187
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+APE++S+ S + DV+ G ++ + G+
Sbjct: 188 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR---NF 327
+H DIKP N+LLD N +++DFG + ++ V S GT Y++PE++
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 328 GTVSCKSDVYGFGMVLLEMAGGR---------RNSNMNATRSSKAYFPSWVYDQLNKGGD 378
G + D + G+ + EM G + FPS V D + D
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 331
Query: 379 LELRNVTEIESMIAR 393
L R + E + +
Sbjct: 332 LIQRLICSRERRLGQ 346
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G +YLH ++H D+K N+ L+ + K+ DFGLA E D GT Y
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNY 183
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+APE++S+ S + DV+ G ++ + G+
Sbjct: 184 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 147 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 199
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 200 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 141 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 193
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 194 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 224
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISR---NF 327
+H DIKP NIL+D N +++DFG + E+ V S GT Y++PE++
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
G + D + G+ + EM G
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYG 277
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 44/229 (19%)
Query: 157 EIIAVTNHFTHKLGQGGFGSVYKGQLHT--GRLIAVKMMEN---------SKFSAEEFIN 205
++++ LG+G FG V + H GR +AVK+++N S+ E +N
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 206 -----------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALG 254
++L +V+E + + D F KEN F L+ ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQ 126
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHN-----FIPKVS---------DFGLAKFHP 300
+ + +LH+ + H D+KP NIL + + PK+ D + F
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 301 KENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
D S Y APE+I + C DV+ G +L+E G
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVILALGWSQPC--DVWSIGCILIEYYLG 230
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 140 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 192
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 193 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 223
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 143 KALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVA----S 195
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 196 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 226
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ + I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 194
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+ PEL+ ++ D++ G +L M
Sbjct: 195 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISDTRGTIG 316
G+EYLH+ I+H DIKP N+LL K+S G+A+ HP D + ++G+
Sbjct: 121 GLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD-DTCRTSQGSPA 176
Query: 317 YLAPELISRNFGTVSC-KSDVYGFGMVLLEMAGG 349
+ PE I+ T S K D++ G+ L + G
Sbjct: 177 FQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 56/223 (25%)
Query: 169 LGQGGFGSVYKGQLHT--GRLIAVKMMENSKFSAE---------EFINEL----LGLCSE 213
LG+G FG V + H G +A+K+++N + E E INE LC +
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQ 100
Query: 214 GF-------KRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
F + +E + + D F K+N + + + +A + +++LH
Sbjct: 101 MFDWFDYHGHMCISFELLGLSTFD---FLKDNNYLPYPIHQVRHMAFQLCQAVKFLH--- 154
Query: 267 DVCILHFDIKPHNIL-------LDHNFIPK------------VSDFGLAKF-HPKENDFV 306
D + H D+KP NIL L +N K V DFG A F H + V
Sbjct: 155 DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIV 214
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
S T Y APE+I + C DV+ G ++ E G
Sbjct: 215 S------TRHYRAPEVILELGWSQPC--DVWSIGCIIFEYYVG 249
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 33/116 (28%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-------------FHPKEND 304
G++Y+H+ ILH D+KP N L++ + KV DFGLA+ P+E+D
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 305 --FVSISDTRG----------TIGYLAPELI--SRNFGTVSCKSDVYGFGMVLLEM 346
V+ T+ T Y APELI N+ DV+ G + E+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA---IDVWSIGCIFAEL 277
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 257 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKF-HPKENDFVSISDTRGT 314
+ ++Y H+ I+H D+KPHN+++DH ++ D+GLA+F HP + V ++ +
Sbjct: 148 KALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVA----S 200
Query: 315 IGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+ PEL+ ++ D++ G +L M R
Sbjct: 201 RYFKGPELLV-DYQMYDYSLDMWSLGCMLASMIFRR 235
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AVK+++ ++ ++ I +L +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-GTIGYLAPELISRNFGT 329
+H D+K N+LLD + K++DFG + E F + DT G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELF-QGKKY 189
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G +YLH ++H D+K N+ L+ + K+ DFGLA E D GT Y
Sbjct: 127 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNY 181
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+APE++S+ S + DV+ G ++ + G+
Sbjct: 182 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AVK+++ ++ ++ I +L +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-GTIGYLAPELISRNFGT 329
+H D+K N+LLD + K++DFG + E F + DT G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELF-QGKKY 189
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV 369
+ PE+++R + D++ G ++ EM K FP
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV------------CHKILFPGRD 229
Query: 370 Y-DQLNK 375
Y DQ NK
Sbjct: 230 YIDQWNK 236
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 67/280 (23%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFSAEEFINELLGLCSEGFKRALVYEYMPNG 227
LG+GGFG+V+ G T RL +A+K++ ++ +++ + C + AL+++ G
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSV-TCP--LEVALLWKVGAGG 95
Query: 228 SLDRHI----FSKENKGQTFGLEKP-------------HEIALGTAR--------GIEYL 262
I + + +G LE+P + G +R I++
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 263 HNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPE 321
H+ ++H DIK NIL+D K+ DFG E +D GT Y PE
Sbjct: 156 HS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVYSPPE 208
Query: 322 LISRNFGTVSCKSDVYGFGMVLLEMAGG----RRNSNMNATRSSKAYFPSWVYDQLNKGG 377
ISR+ + + V+ G++L +M G R+ + ++ +FP
Sbjct: 209 WISRH-QYHALPATVWSLGILLYDMVCGDIPFERDQEI---LEAELHFP----------- 253
Query: 378 DLELRNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 417
+ ++ C + C+ K + RPS+ ++L
Sbjct: 254 -----------AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 219 LVYEYMPNGSLDRHIFSK-ENKG-QTFGLEKPHEIALGTARGIEYLHNGCDVCILHFDIK 276
+V E + G L FS+ +++G Q F + EI I+YLH+ + I H D+K
Sbjct: 92 IVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 277 PHNILLDH---NFIPKVSDFGLAK 297
P N+L N I K++DFG AK
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 39/211 (18%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVK-MMENSKFSAEEFINE------------LLGLCSE- 213
L +GGF VY+ Q + +GR A+K ++ N + I E ++ CS
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 214 ---------GFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHN 264
G L+ + G L + E++G + +I T R ++++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG-PLSCDTVLKIFYQTCRAVQHMHR 154
Query: 265 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLA---------KFHPKENDFVSISDTRGTI 315
I+H D+K N+LL + K+ DFG A + + V TR T
Sbjct: 155 Q-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 316 G-YLAPELIS--RNFGTVSCKSDVYGFGMVL 343
Y PE+I NF + K D++ G +L
Sbjct: 214 PMYRTPEIIDLYSNF-PIGEKQDIWALGCIL 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G +YLH ++H D+K N+ L+ + K+ DFGLA E D GT Y
Sbjct: 151 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNY 205
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+APE++S+ S + DV+ G ++ + G+
Sbjct: 206 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 36/199 (18%)
Query: 168 KLGQGGFGSVYK------GQLHTGRLIAVKMM---ENSKFSAEEFINELLG--------- 209
+LG+G F V + GQ + ++I K + ++ K E I LL
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVC 269
SE L+++ + G L I ++E + +I +E + + +
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI-------LEAVLHCHQMG 141
Query: 270 ILHFDIKPHNILLDHNF---IPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELISR 325
++H D+KP N+LL K++DFGLA + ++ + + GT GYL+PE++ +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA---GTPGYLSPEVLRK 198
Query: 326 N-FGTVSCKSDVYGFGMVL 343
+ +G D++ G++L
Sbjct: 199 DPYGK---PVDLWACGVIL 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G +YLH ++H D+K N+ L+ + K+ DFGLA E D GT Y
Sbjct: 153 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNY 207
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 350
+APE++S+ S + DV+ G ++ + G+
Sbjct: 208 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TGR +AVK+++ ++ + I +L +
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKY---I 135
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTV 330
+H D+K N+LLD + K++DFG + N + G+ Y APEL +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GSPPYAAPELF-QGKKYD 191
Query: 331 SCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 192 GPEVDVWSLGVILYTLVSG 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AVK+++ ++ ++ I +L +
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 211 CSEGFKRALVYEYMPNGS----LDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGC 266
LV EY G L H + KE + + K +I ++Y H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA----KFRQIV----SAVQYCHQKF 126
Query: 267 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-GTIGYLAPELISR 325
I+H D+K N+LLD + K++DFG + E F + DT G+ Y APEL
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQG 179
Query: 326 NFGTVSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 180 K-KYDGPEVDVWSLGVILYTLVSG 202
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDF 170
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G ++ E
Sbjct: 171 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 346 MAGG 349
M G
Sbjct: 218 MIKG 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G+ LH + ++H D+ P NILL N + DF LA+ + + R Y
Sbjct: 146 GLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WY 199
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP-SWVYDQLNK- 375
APEL+ + F + D++ G V+ EM + KA F S Y+QLNK
Sbjct: 200 RAPELVMQ-FKGFTKLVDMWSAGCVMAEMF------------NRKALFRGSTFYNQLNKI 246
Query: 376 ---GGDLELRNVTEIESMIARKLCMIGL-------WCIQVKAADRPSMTKVLEMLE---- 421
G ++ +V S AR L W V AD ++ + +MLE
Sbjct: 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306
Query: 422 GSIDDLQMPPKPFFSS 437
I Q P+F S
Sbjct: 307 RRISTEQALRHPYFES 322
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
G+ LH + ++H D+ P NILL N + DF LA+ + + R Y
Sbjct: 146 GLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WY 199
Query: 318 LAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP-SWVYDQLNK- 375
APEL+ + F + D++ G V+ EM + KA F S Y+QLNK
Sbjct: 200 RAPELVMQ-FKGFTKLVDMWSAGCVMAEMF------------NRKALFRGSTFYNQLNKI 246
Query: 376 ---GGDLELRNVTEIESMIARKLCMIGL-------WCIQVKAADRPSMTKVLEMLE---- 421
G ++ +V S AR L W V AD ++ + +MLE
Sbjct: 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306
Query: 422 GSIDDLQMPPKPFFSS 437
I Q P+F S
Sbjct: 307 RRISTEQALRHPYFES 322
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 59/274 (21%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 163
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 164 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 217
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRN- 383
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 218 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 259
Query: 384 -VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
+E + +I WC+ ++ +DRP+ ++
Sbjct: 260 VSSECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 35/202 (17%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AV++++ ++ ++ I +L +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISDTRGTIGYLAPELISRNF 327
+H D+K N+LLD + K++DFG + N+F + + G+ Y APEL
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDEFCGSPPYAAPELFQGK- 187
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 59/274 (21%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 163
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 164 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 217
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRN- 383
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 218 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 259
Query: 384 -VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
+E + +I WC+ ++ +DRP+ ++
Sbjct: 260 VSSECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 106/272 (38%), Gaps = 55/272 (20%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 163
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 164 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 217
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 218 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 259
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
E + WC+ ++ +DRP+ ++
Sbjct: 260 VSXECQHLIR------WCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 59/274 (21%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 162
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 163 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 216
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRN- 383
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 217 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 258
Query: 384 -VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
+E + +I WC+ ++ +DRP+ ++
Sbjct: 259 VSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 106/272 (38%), Gaps = 55/272 (20%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 162
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 163 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 216
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 217 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 258
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
E + WC+ ++ +DRP+ ++
Sbjct: 259 VSXECQHLIR------WCLALRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 106/272 (38%), Gaps = 55/272 (20%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 163
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 164 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 217
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNV 384
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 218 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 259
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
E + WC+ ++ +DRP+ ++
Sbjct: 260 VSXECQHLIR------WCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 59/274 (21%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 162
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELIS-- 324
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I
Sbjct: 163 V--LHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTV-YTDFDGTRVYSPPEWIRYH 216
Query: 325 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRN- 383
R G + V+ G++L +M G P + +D+ GG + R
Sbjct: 217 RYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQR 258
Query: 384 -VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
+E + +I WC+ ++ +DRP+ ++
Sbjct: 259 VSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 108/272 (39%), Gaps = 55/272 (20%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 130
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I R
Sbjct: 131 V--LHRDIKDENILIDLNRGELKLIDFGSGALL---KDTV-YTDFDGTRVYSPPEWI-RY 183
Query: 327 FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRN--V 384
+ V+ G++L +M G P + +D+ GG + R
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGD--------------IP-FEHDEEIIGGQVFFRQRVS 228
Query: 385 TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 416
+E + +I WC+ ++ +DRP+ ++
Sbjct: 229 SECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV 369
+ PE+++R + D++ G ++ EM K FP
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV------------CHKILFPGRD 229
Query: 370 Y-DQLNK 375
Y DQ NK
Sbjct: 230 YIDQWNK 236
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AV++++ ++ ++ I +L +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTR-GTIGYLAPELISRNFGT 329
+H D+K N+LLD + K++DFG + E F + DT G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELF-QGKKY 189
Query: 330 VSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 270 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
I+H DIK NI++ +F K+ DFG A + + F + GTI Y APE++ N
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPEVLMGN 204
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGG 349
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGG 349
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 98/237 (41%), Gaps = 44/237 (18%)
Query: 144 RTTMQTVDN--ILLPEIIAVTNH--------FTH--KLGQGGFGSVYKGQ-LHTGRLIAV 190
R +T DN +LL E + ++ TH +LG+G FG V++ + TG AV
Sbjct: 43 RLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAV 102
Query: 191 KMMENSKFSAEEFIN----------ELLGLCSEGFKRALVYEYMPNGSLDRHIFSKENKG 240
K + F EE + L G EG + E + GSL + I
Sbjct: 103 KKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI------- 155
Query: 241 QTFGLEKPHEIAL---GTA-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PKVSDFGL 295
+ G P + AL G A G+EYLH ILH D+K N+LL + + DFG
Sbjct: 156 KQMGC-LPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGH 211
Query: 296 AK-FHPK--ENDFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 349
A P ++ GT ++APE++ K D++ ++L M G
Sbjct: 212 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 266
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ V TR Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YY 193
Query: 318 LAPELISRNFGTVSCKS-DVYGFGMVLLEMAGG 349
APE+I G ++ D++ G ++ EM G
Sbjct: 194 RAPEVI---LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 38/203 (18%)
Query: 169 LGQGGFG-SVYKGQLHTGRLIAVKMMENSKFSAEEFINELLGLCS------EGFKR---- 217
+G G FG + + L+AVK +E + E E++ S FK
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 218 ----ALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCILHF 273
A+V EY G L F + F ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 274 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISDTRGTIGYLAPE-LISRNF 327
D+K N LLD + P K+ FG +K H + D V GT Y+APE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV------GTPAYIAPEVLLKKEY 193
Query: 328 -GTVSCKSDVYGFGMVLLEMAGG 349
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 41/151 (27%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 170
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G ++ E
Sbjct: 171 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 346 MAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 375
M K FP Y DQ NK
Sbjct: 218 MV------------RHKILFPGRDYIDQWNK 236
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G ++ E
Sbjct: 171 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 346 MAGG 349
M G
Sbjct: 218 MIKG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 257 RGIEYLH-NGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLA-KFHPKENDFVSISDTRG 313
R I LH +VC H DIKPHN+L++ + K+ DFG A K P E + I
Sbjct: 140 RSIGCLHLPSVNVC--HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY- 196
Query: 314 TIGYLAPELISRNFGT--VSCKSDVYGFGMVLLEMAGG 349
Y APELI FG + D++ G + EM G
Sbjct: 197 ---YRAPELI---FGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 41/151 (27%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 170
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G ++ E
Sbjct: 171 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 346 MAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 375
M K FP Y DQ NK
Sbjct: 218 MV------------RHKILFPGRDYIDQWNK 236
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 41/151 (27%)
Query: 238 NKGQTFGLEKPHE----IALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 293
N Q +E HE + GI++LH+ I+H D+KP NI++ + K+ DF
Sbjct: 107 NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 163
Query: 294 GLAKFHPKENDFVSISDTRGTIGYLAPELISRNFGTVSC--------KSDVYGFGMVLLE 345
GLA+ T GT + P +++R + D++ G ++ E
Sbjct: 164 GLAR-------------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 346 MAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 375
M K FP Y DQ NK
Sbjct: 211 MV------------RHKILFPGRDYIDQWNK 229
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGG 349
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 168 KLGQGGFGSVY-----KGQLHTGRLIAVKMMENSKFSA-----------EEFINELLGLC 211
++G GG V+ K Q++ + + ++ +N + ++ ++++ L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 212 SEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCIL 271
+Y M G++D + + K+ K P E +E +H I+
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWERKSYWKNMLEAVHTIHQHGIV 177
Query: 272 HFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISDTRGTIGYLAPELI-----SR 325
H D+KP N L+ + K+ DFG+A + P V S G + Y+ PE I SR
Sbjct: 178 HSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQV-GAVNYMPPEAIKDMSSSR 235
Query: 326 NFG----TVSCKSDVYGFGMVLLEMAGGR 350
G +S KSDV+ G +L M G+
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGG 349
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKF---SAEEFINELLGLCSEGFKRAL-VYEY 223
+G+G FG V K H + +A+KM+ N K A E I L L + + V
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 224 MPNGSLDRHI-------------FSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
+ N + HI K+NK Q F L + A + ++ LH I
Sbjct: 165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---I 221
Query: 271 LHFDIKPHNILLDHNFIP--KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNF 327
+H D+KP NILL KV DFG + + + + I + Y APE+I +
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQ----SRFYRAPEVILGARY 276
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
G D++ G +L E+ G
Sbjct: 277 GM---PIDMWSLGCILAELLTG 295
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
Query: 258 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISDTRGTIGY 317
GI++LH+ I+H D+KP NI++ + K+ DFGLA+ T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 182
Query: 318 LAPELISRNFGTVSC--------KSDVYGFGMVLLEMAGG 349
+ P +++R + D++ G ++ EM G
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 169 LGQGGFGSVYKGQLH-TGRLIAVKMMENSKF---SAEEFINELLGLCSEGFKRAL-VYEY 223
+G+G FG V K H + +A+KM+ N K A E I L L + + V
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 224 MPNGSLDRHI-------------FSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
+ N + HI K+NK Q F L + A + ++ LH I
Sbjct: 165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---I 221
Query: 271 LHFDIKPHNILLDHNFIP--KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELI-SRNF 327
+H D+KP NILL KV DFG + + + + I + Y APE+I +
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQ----SRFYRAPEVILGARY 276
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
G D++ G +L E+ G
Sbjct: 277 GM---PIDMWSLGCILAELLTG 295
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 35/202 (17%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AVK+++ ++ ++ I +L +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISDTRGTIGYLAPELISRNF 327
+H D+K N+LLD + K++DFG + N+F + G Y APEL
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGK- 187
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF--------HPKENDFV 306
T R ++ LH G +V +H D+KP N+L++ N KV DFGLA+
Sbjct: 121 TLRAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 307 SISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
+++ T Y APE++ + S DV+ G +L E+
Sbjct: 178 GMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 35/202 (17%)
Query: 169 LGQGGFGSVYKGQ-LHTGRLIAVKMMENSKFSAEEF-----------------INELLGL 210
+G+G F V + + TG+ +AVK+++ ++ ++ I +L +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 211 CSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCDVCI 270
LV EY G + ++ + + K +I ++Y H I
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 271 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISDTRGTIGYLAPELISRNF 327
+H D+K N+LLD + K++DFG + N+F + G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELF-QGK 187
Query: 328 GTVSCKSDVYGFGMVLLEMAGG 349
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 50/210 (23%)
Query: 168 KLGQGGFGSVYKG-QLHTGRLIAVK---------------MMENSKFSAEEFIN--ELLG 209
KLG+G +G VYK T +A+K + E S + N EL
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 210 LCSEGFKRALVYEYMPNGSLDRHIFSKENKGQTFGLEKPHEIALGTARGIEY-LHNGCDV 268
+ + L++EY N L ++ ++K ++++ + Y L NG +
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKY------------MDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 269 C----ILHFDIKPHNILL---DHNFIP--KVSDFGLAK-FHPKENDFVSISDTRGTIGYL 318
C LH D+KP N+LL D + P K+ DFGLA+ F F + T+ Y
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF---THEIITLWYR 204
Query: 319 APELI--SRNFGTVSCKSDVYGFGMVLLEM 346
PE++ SR++ T D++ + EM
Sbjct: 205 PPEILLGSRHYST---SVDIWSIACIWAEM 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 255 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF---------HP--KEN 303
T R ++ LH G +V +H D+KP N+L++ N KV DFGLA+ P +++
Sbjct: 121 TLRAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 304 DFVSISDTRGTIGYLAPELISRNFGTVSCKSDVYGFGMVLLEM 346
V TR Y APE++ + S DV+ G +L E+
Sbjct: 178 GMVEFVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 102/270 (37%), Gaps = 51/270 (18%)
Query: 169 LGQGGFGSVYKGQLHTGRL-IAVKMMENSKFS-AEEFINE--------LLGLCSEGFK-- 216
LG GGFGSVY G + L +A+K +E + S E N LL S GF
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 217 -RALVYEYMPNG---SLDR-----HIFSKENKGQTFGLEKPHEIALGTARGIEYLHNGCD 267
R L + P+ L+R +F + E + + HN C
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CG 130
Query: 268 VCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISDTRGTIGYLAPELISRN 326
V LH DIK NIL+D N K+ DFG D V +D GT Y PE I R
Sbjct: 131 V--LHRDIKDENILIDLNRGELKLIDFGSGALL---KDTV-YTDFDGTRVYSPPEWI-RY 183
Query: 327 FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELRNVTE 386
+ V+ G++L +M G + F R +E
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF-------------FRQRVSSE 230
Query: 387 IESMIARKLCMIGLWCIQVKAADRPSMTKV 416
+ +I WC+ ++ +DRP+ ++
Sbjct: 231 CQHLIR--------WCLALRPSDRPTFEEI 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,772,406
Number of Sequences: 62578
Number of extensions: 599718
Number of successful extensions: 3123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 1518
Number of HSP's gapped (non-prelim): 1177
length of query: 453
length of database: 14,973,337
effective HSP length: 102
effective length of query: 351
effective length of database: 8,590,381
effective search space: 3015223731
effective search space used: 3015223731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)