BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048518
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42484|RPS2_ARATH Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2
PE=1 SV=1
Length = 909
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 44/200 (22%)
Query: 46 GEGFPRLQHLHVTGCSEILH-----IVGSVRRVR------C--------------EVFPL 80
G +QHLHV C+E+L+ + R +R C + P
Sbjct: 687 GALHKHIQHLHVEECNELLYFNLPSLTNHGRNLRRLSIKSCHDLEYLVTPADFENDWLPS 746
Query: 81 LESLDLINLTNLETICYSQLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEV 140
LE L L +L NL + + + +D N+R I + C KLK + S + L L+ +E+
Sbjct: 747 LEVLTLHSLHNLTRVWGNSVSQD-CLRNIRCINISHCNKLK---NVSWVQKLPKLEVIEL 802
Query: 141 VNCNKLKMMIGPDMEKPTTTQGFTEINAEDDQVTFPRLEELELVSLTNIKKLWPDQFQGM 200
+C +++ +I + E P+ +D FP L+ L L + + P +F
Sbjct: 803 FDCREIEELIS-EHESPSV----------EDPTLFPSLKTLRTRDLPELNSILPSRFS-- 849
Query: 201 YCCQNLTKVTVTRCCPLKYM 220
Q + + +T C +K +
Sbjct: 850 --FQKVETLVITNCPRVKKL 867
>sp|O64790|DRL17_ARATH Probable disease resistance protein At1g61300 OS=Arabidopsis
thaliana GN=At1g61300 PE=2 SV=2
Length = 762
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 PRLQHLHVTGCSEILHIVGSVRRVR-CEVFPLL--ESLDLINLTNLETICYSQLREDQSF 106
P L +L++ E+ I+ + + P L E L L NL LE+I +S L F
Sbjct: 647 PNLVYLYIEDSREVGEIINKEKATNLTSITPFLKLERLILYNLPKLESIYWSPLH----F 702
Query: 107 SNLRIIYVYSCPKLKYL 123
L II+V CPKL+ L
Sbjct: 703 PRLLIIHVLDCPKLRKL 719
>sp|Q5RFI6|FAKD5_PONAB FAST kinase domain-containing protein 5 OS=Pongo abelii GN=FASTKD5
PE=2 SV=1
Length = 764
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 51 RLQHLHVTGCSEILHIVGSVRRVRCEVFPLLESL-----DLINLTNLETICYSQLREDQS 105
R + L ++ +++++G R+V ++ LESL DLINL + TIC + +
Sbjct: 272 RWKDLSLSQLVHLIYVIGENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGFFKSKTN 331
Query: 106 FSN--LRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMM--IGPDMEKPTTTQ 161
S +R I +C +++L S S+ + + V + N +K + I P Q
Sbjct: 332 LSEFVMRKIGDLACADMQHLSSHSLVNIVKMFRFTHVDHINFMKQIGEIAPQRIPSLGVQ 391
Query: 162 G 162
G
Sbjct: 392 G 392
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 32 SLTGVQNVVHELDDGEGFPRLQHLHVTGCSEILHIVGSVRRVRCEVFPLLESLDLINLTN 91
SL+G NV L++ F L+ L ++GC ++GS V L +L +++++N
Sbjct: 283 SLSGCWNVTKGLEELCKFSNLRELDISGC----LVLGSA-----VVLKNLINLKVLSVSN 333
Query: 92 LETICYSQLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMMIG 151
+ + L + NL + + C + S NL L+++++ C L G
Sbjct: 334 CKN--FKDLNGLERLVNLDKLNLSGCHGVS---SLGFVANLSNLKELDISGCESLVCFDG 388
Query: 152 -PDMEKPTT-----TQGFTEINAEDDQVTFPRLEELELVSLTNIKKLWPDQFQGMYCCQN 205
D+ + FT + A + ++ EL+L I L G+ +
Sbjct: 389 LQDLNNLEVLYLRDVKSFTNVGAIKN---LSKMRELDLSGCERITSL-----SGLETLKG 440
Query: 206 LTKVTVTRCCPLKYMFSYSMANSLGQLRHLEIINCWSMEGIVNTTGLGGRDEF 258
L ++++ C + S+ SL LR L + C ++E + G+ G +E
Sbjct: 441 LEELSLEGC---GEIMSFDPIWSLHHLRVLYVSECGNLEDLSGLEGITGLEEL 490
>sp|Q95KD0|FAKD5_MACFA FAST kinase domain-containing protein 5 OS=Macaca fascicularis
GN=FASTKD5 PE=2 SV=1
Length = 764
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 62 EILHIVGSVRRVRCEVFPLLESL-----DLINLTNLETICYSQLREDQSFSN--LRIIYV 114
+++++G R+V ++ LESL DLINL + TIC + S S +R I
Sbjct: 283 HLIYVIGENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGFFKSKTSLSEFVMRKIGD 342
Query: 115 YSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMM--IGPDMEKPTTTQG 162
+C +++L S ++ + + V + N +K + I P QG
Sbjct: 343 LACANMQHLSSHALVNIVKMFRFTHVDHINFMKQLGEIAPQRIPSLGVQG 392
>sp|Q8L3R3|RFL1_ARATH Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1
PE=3 SV=2
Length = 885
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 30/182 (16%)
Query: 49 FPR----LQHLHVTGCSEILHIVGSVRRVRCEVFPLLESLDLINLTN-------LETICY 97
+PR +QH+++ H V V P + +L I++ N +E +
Sbjct: 679 YPRVGRCIQHIYIRD-----HWERPEESVGVLVLPAIHNLCYISIWNCWMWEIMIEKTPW 733
Query: 98 SQLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMMIGPDMEKP 157
+ + +FSNL + + C LK L A NL+ L+ V C L+ +I EK
Sbjct: 734 KKNLTNPNFSNLSNVRIEGCDGLKDLTWLLFAPNLINLR---VWGCKHLEDIISK--EKA 788
Query: 158 TTTQGFTEINAEDDQVTFPRLEELELVSLTNIKKLWPDQ--FQGMYCCQNLTKVTVTRCC 215
+ E + + F +LE L L L+ +K ++ + FQ + C L R
Sbjct: 789 ASV-------LEKEILPFQKLECLNLYQLSELKSIYWNALPFQRLRCLDILNNCPKLRKL 841
Query: 216 PL 217
PL
Sbjct: 842 PL 843
>sp|Q5UPH7|YL107_MIMIV Putative BTB/POZ domain-containing protein L107 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L107 PE=3 SV=1
Length = 501
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 205 NLTKVTVTRCCP-LKYMFSYSMANSLGQLRHLEIINCWSMEGIVNT 249
+L KV ++ CP + MFS S ++S+ +E+IN + M I+N+
Sbjct: 32 HLHKVILSSSCPYFETMFSNSFSDSVSDKFRMEVINVYVMADIINS 77
>sp|O53856|NARL_MYCTU Probable transcriptional regulatory protein NarL OS=Mycobacterium
tuberculosis GN=narL PE=1 SV=1
Length = 216
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 6 PEKVSLLLGNDGTKMLLKRTEDLRLYSLTGVQNVVHELDDGEGFPRLQHLH 56
PEKV +++G+D L R +R SL+G NVV E DDG L H
Sbjct: 6 PEKVRVVVGDDHP---LFREGVVRALSLSGSVNVVGEADDGAAALELIKAH 53
>sp|Q9FG91|DRL32_ARATH Probable disease resistance protein At5g43730 OS=Arabidopsis
thaliana GN=At5g43730 PE=2 SV=1
Length = 848
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 78 FPLLESLDLINLTNLETICYSQLREDQSFSNLRIIYVYSCPKL 120
F LESL L L L IC++ Q+ NLR YV CPKL
Sbjct: 798 FGKLESLHLYQLAELTEICWNY----QTLPNLRESYVNYCPKL 836
>sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190 OS=Arabidopsis thaliana
GN=At4g27190 PE=2 SV=1
Length = 985
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 21 LLKRTEDLRLYSLTGVQNVVHEL-DDGEGFPRLQHLHVTGC-----SEILHIVGSVRRVR 74
LL T L L G++ ++ +L D +GF L+ L + S + + + +
Sbjct: 742 LLAYTTSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINTNSWVEMVSTNTSKQS 801
Query: 75 CEVFPLLESLDLINL--TNLETICYSQLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNL 132
++ LL +L+ ++L +LET Q L+II + C KL+ L +
Sbjct: 802 SDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMCRKLRTLLDKRNFLTI 861
Query: 133 LGLQKVEVVNCNKLK 147
L+++E+ C+ L+
Sbjct: 862 PNLEEIEISYCDSLQ 876
>sp|Q7L8L6|FAKD5_HUMAN FAST kinase domain-containing protein 5 OS=Homo sapiens GN=FASTKD5
PE=1 SV=1
Length = 764
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 62 EILHIVGSVRRVRCEVFPLLESL-----DLINLTNLETICYSQLREDQSFSN--LRIIYV 114
+++++G R+V ++ LESL DLINL + TIC + + S +R I
Sbjct: 283 HLIYVIGENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGFFKSSTNLSEFVMRKIGD 342
Query: 115 YSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMM--IGPDMEKPTTTQG 162
+C +++L S S+ + + V + N +K + I P QG
Sbjct: 343 LACANIQHLSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRIPSLGVQG 392
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 42 ELDDGEGFP---RLQHLHVTGCSEILHIVGSVRRVRCEVFPLLESLDLINLTNLETICYS 98
++D GFP R L + + G +++ E FP+LE + +I+ T+ S
Sbjct: 774 DIDVHSGFPTRIRFPSLRKLDIWDFGSLKGLLKKEGEEQFPVLEEM-IIHECPFLTLS-S 831
Query: 99 QLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMMIGPDMEKPT 158
LR + ++LRI Y K+ F M KNL L+ + + CN LK E PT
Sbjct: 832 NLR---ALTSLRICY----NKVATSFPEEMFKNLANLKYLTISRCNNLK-------ELPT 877
Query: 159 TTQGFTEINAEDDQV--TFPRLEELELVSLTNIKKLWPDQFQGMYC----CQNLTKVTV- 211
+ + + Q+ L E L L+++ +L+ + + C Q+LT +T
Sbjct: 878 SLASLNALKSLKIQLCCALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHLTTLTSL 937
Query: 212 -TRCCP 216
R CP
Sbjct: 938 KIRGCP 943
>sp|Q9FLB4|DRL31_ARATH Putative disease resistance protein At5g05400 OS=Arabidopsis
thaliana GN=At5g05400 PE=2 SV=1
Length = 874
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 50 PRLQHLHVTGCSEILHIVGSVRRVR----CEV-----FPLLESLDLINLTNLETICYSQL 100
P L L+V +I HI+ R CE+ F LE L L NL L++I
Sbjct: 758 PHLATLYVVCLPDIEHIISRSEESRLQKTCELAGVIPFRELEFLTLRNLGQLKSI----Y 813
Query: 101 REDQSFSNLRIIYVYSCPKLKYL 123
R+ F L+ I + SCPKL L
Sbjct: 814 RDPLLFGKLKEINIKSCPKLTKL 836
>sp|O74991|POF3_SCHPO F-box/TPR repeat protein pof3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pof3 PE=1 SV=1
Length = 577
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 33/116 (28%)
Query: 140 VVNCNKLKMMIGPDMEKPTTTQGFTEINAEDDQVTFPRLEELELVSLTNIKKLWPDQFQG 199
+ +C KLK ++ D F EI A + P LE LE+ PD
Sbjct: 448 LTSCYKLKKLVLHD--SLALAPHFFEIFA-----SLPELEHLEI----------PDNV-- 488
Query: 200 MYCCQNLTKVTVTRCCP-LKYM-FSYSMA----------NSLGQLRHLEIINCWSM 243
QN + +T CCP LKY+ FS S++ L +L+ ++IINC S+
Sbjct: 489 --ALQNKHAIHITDCCPNLKYVNFSNSISLDGSGFIAVLRGLKELKRIDIINCDSV 542
>sp|Q9RTQ2|ARGJ_DEIRA Arginine biosynthesis bifunctional protein ArgJ OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=argJ PE=3 SV=1
Length = 389
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 33 LTGVQNVVHELD-----DGEGFPRLQHLHVTGCSEILHIVGSVRRVRCEVFPLLES 83
LT ++ V+ +L DGEG RL + VTG + +G+ R C V PLL+S
Sbjct: 244 LTALEGVMRDLARQIAADGEGATRLLTVRVTGAASEAEALGAAR--TCCVSPLLKS 297
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 18/100 (18%)
Query: 10 SLLLGNDGTKMLLKR-TEDLRLYSLTGVQNVVHEL------------DDG-----EGFPR 51
+L+ G G + LL R L +L +QN HEL DDG G PR
Sbjct: 176 ALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPR 235
Query: 52 LQHLHVTGCSEILHIVGSVRRVRCEVFPLLESLDLINLTN 91
LQ L ++GC + + + C +LE+ +LT+
Sbjct: 236 LQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTD 275
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 31/233 (13%)
Query: 32 SLTGVQNVVHELDDGEGFPRLQHLHVTGCSEILHIVGSVRRVRCEVFPLLESLDLINLTN 91
SL+G NV L++ F L+ L ++GC ++GS V L +L +++++N
Sbjct: 283 SLSGCWNVTKGLEELCKFSNLRELDISGC----LVLGSA-----VVLKNLINLKVLSVSN 333
Query: 92 LETICYSQLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEVVNCNKLKMMIG 151
+ + L + NL + + C + S NL L+++++ C L G
Sbjct: 334 CKN--FKDLNGLERLVNLEKLNLSGCHGVS---SLGFVANLSNLKELDISGCESLVCFDG 388
Query: 152 -PDMEKPTT-----TQGFTEINAEDDQVTFPRLEELELVSLTNIKKLWPDQFQGMYCCQN 205
D+ + FT + A + ++ EL+L I L G+ +
Sbjct: 389 LQDLNNLEVLYLRDVKSFTNVGAIKN---LSKMRELDLSGCERITSL-----SGLETLKG 440
Query: 206 LTKVTVTRCCPLKYMFSYSMANSLGQLRHLEIINCWSMEGIVNTTGLGGRDEF 258
L ++++ C + S+ SL LR L + C ++E + L G +E
Sbjct: 441 LEELSLEGC---GEIMSFDPIWSLYHLRVLYVSECGNLEDLSGLQCLTGLEEM 490
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 31.6 bits (70), Expect = 6.1, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 34/158 (21%)
Query: 37 QNVVHELDDGEGFPRLQHLHVTGCSEILHIV---GSVRRVRCEVFPLLESLDLINLTNLE 93
+N + +L P+L++L++ G + + + G+ + L+ +D N T+LE
Sbjct: 282 ENDLTDLTSLAKLPKLKNLYIKGNASLKSLATLKGATK---------LQLIDASNCTDLE 332
Query: 94 TICYSQLREDQSFSNLRIIYVYSCPKLKYLFSFSMAKNLLGLQKVEVV--------NCNK 145
T L + S L +I + C KLK + S NL+ + N K
Sbjct: 333 T-----LGDISGLSELEMIQLSGCSKLKEITSLKDLPNLVNITADSCAIEDLGTLNNLPK 387
Query: 146 LKMMIGPDMEKPTTTQGFTEINAEDDQVTFPRLEELEL 183
L+ +I D + T INA D P+L+ L L
Sbjct: 388 LQTLILSD------NKDLTNINAITD---MPQLKTLAL 416
>sp|Q5L5E3|MDH_CHLAB Malate dehydrogenase OS=Chlamydophila abortus (strain S26/3)
GN=mdh PE=3 SV=1
Length = 330
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 27 DLRLYSLTGVQNVVH----ELDDGEGFPRLQHLHVT 58
DLR+Y L G++ V+ ELDDG +P LQ L VT
Sbjct: 41 DLRIYDLPGLERVLSGVRMELDDG-AYPLLQSLRVT 75
>sp|P13889|POLN_RUBVT Non-structural polyprotein p200 OS=Rubella virus (strain Therien)
PE=1 SV=5
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|O40955|POLN_RUBVR Non-structural polyprotein p200 OS=Rubella virus (strain RA27/3
vaccine) PE=3 SV=1
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|Q99IE7|POLN_RUBVO Non-structural polyprotein p200 OS=Rubella virus (strain TO-336
vaccine) PE=3 SV=1
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|Q8BCR0|POLN_RUBVN Non-structural polyprotein p200 OS=Rubella virus (strain RN-UK86)
PE=3 SV=1
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|Q86500|POLN_RUBVM Non-structural polyprotein p200 OS=Rubella virus (strain M33) PE=1
SV=2
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|Q9J6K9|POLN_RUBVD Non-structural polyprotein p200 OS=Rubella virus (strain Cendehill)
PE=3 SV=2
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|Q6X2U2|POLN_RUBVC Non-structural polyprotein p200 OS=Rubella virus (strain BRDII) PE=3
SV=1
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
>sp|Q6X2U4|POLN_RUBVB Non-structural polyprotein p200 OS=Rubella virus (strain BRD1) PE=3
SV=1
Length = 2116
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 13 LGNDGTKMLLKRTEDLRLYSLTGVQNV--VHELDDG 46
+G DGT + L T DL + SLT + +HEL+DG
Sbjct: 1547 VGRDGTDVALALTRDLAIVSLTRASDALYLHELEDG 1582
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,240,814
Number of Sequences: 539616
Number of extensions: 3657606
Number of successful extensions: 7228
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 7206
Number of HSP's gapped (non-prelim): 57
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)