Query 048525
Match_columns 86
No_of_seqs 138 out of 752
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 17:54:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048525.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048525hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.7 9.2E-17 3.1E-21 92.8 8.0 67 1-70 1-67 (68)
2 1cc8_A Protein (metallochapero 99.6 2.8E-15 9.7E-20 86.9 9.2 68 1-70 4-72 (73)
3 3dxs_X Copper-transporting ATP 99.5 4.6E-14 1.6E-18 81.6 9.0 68 1-69 1-71 (74)
4 4a4j_A Pacszia, cation-transpo 99.5 8.8E-14 3E-18 79.3 9.0 66 1-68 1-69 (69)
5 2crl_A Copper chaperone for su 99.5 1.1E-13 3.9E-18 85.7 9.9 72 1-74 18-89 (98)
6 3fry_A Probable copper-exporti 99.5 3.3E-13 1.1E-17 78.5 8.2 66 1-70 4-70 (73)
7 2roe_A Heavy metal binding pro 99.3 3E-12 1E-16 71.9 6.3 63 4-68 2-65 (66)
8 2xmm_A SSR2857 protein, ATX1; 99.3 4.7E-12 1.6E-16 69.6 5.9 61 3-65 2-63 (64)
9 2l3m_A Copper-ION-binding prot 99.3 1.7E-11 5.9E-16 68.9 8.1 64 1-65 4-70 (71)
10 2xmw_A PACS-N, cation-transpor 99.3 6.1E-11 2.1E-15 66.3 9.0 67 1-68 2-70 (71)
11 2qif_A Copper chaperone COPZ; 99.3 5.9E-11 2E-15 65.2 8.6 64 1-65 1-67 (69)
12 1mwy_A ZNTA; open-faced beta-s 99.2 8E-11 2.7E-15 67.0 9.1 65 1-66 2-67 (73)
13 2k2p_A Uncharacterized protein 99.2 1.3E-11 4.3E-16 74.5 5.8 63 1-65 21-84 (85)
14 1y3j_A Copper-transporting ATP 99.2 5.1E-11 1.8E-15 68.4 7.7 68 1-69 2-72 (77)
15 1qup_A Superoxide dismutase 1 99.2 4.7E-11 1.6E-15 84.2 8.9 70 2-73 6-75 (222)
16 1fvq_A Copper-transporting ATP 99.2 1E-10 3.5E-15 65.7 8.5 66 3-69 3-70 (72)
17 1opz_A Potential copper-transp 99.2 1.1E-10 3.8E-15 65.8 8.3 66 1-67 5-73 (76)
18 1osd_A MERP, hypothetical prot 99.2 5.5E-11 1.9E-15 66.8 6.9 66 1-67 2-70 (72)
19 1aw0_A Menkes copper-transport 99.2 1.2E-10 4.1E-15 65.4 7.8 65 2-67 3-70 (72)
20 2g9o_A Copper-transporting ATP 99.2 1.4E-10 4.7E-15 69.9 7.9 67 3-70 4-76 (90)
21 1kvi_A Copper-transporting ATP 99.2 1.3E-10 4.4E-15 66.9 7.5 68 1-69 7-77 (79)
22 3cjk_B Copper-transporting ATP 99.2 3.3E-10 1.1E-14 64.4 9.1 68 2-70 2-72 (75)
23 1jww_A Potential copper-transp 99.2 2E-10 6.9E-15 65.8 7.8 68 1-69 2-72 (80)
24 1jk9_B CCS, copper chaperone f 99.1 2E-10 6.7E-15 82.4 8.8 69 3-73 8-76 (249)
25 1cpz_A Protein (COPZ); copper 99.1 2.5E-10 8.7E-15 63.2 7.3 63 4-67 2-67 (68)
26 2ldi_A Zinc-transporting ATPas 99.1 3.3E-10 1.1E-14 62.7 7.4 64 1-65 2-68 (71)
27 1yjr_A Copper-transporting ATP 99.1 3.6E-10 1.2E-14 63.8 7.6 67 2-69 4-73 (75)
28 2kyz_A Heavy metal binding pro 99.1 9E-11 3.1E-15 66.1 4.7 61 1-66 1-62 (67)
29 1q8l_A Copper-transporting ATP 99.1 2.6E-10 9E-15 67.1 6.9 67 2-69 9-78 (84)
30 1p6t_A Potential copper-transp 99.1 5.3E-10 1.8E-14 71.4 8.1 68 2-70 74-144 (151)
31 2kkh_A Putative heavy metal tr 99.1 1.1E-09 3.8E-14 65.9 8.7 70 1-71 15-87 (95)
32 1yg0_A COP associated protein; 99.1 5.4E-10 1.8E-14 61.5 6.5 62 3-65 2-65 (66)
33 2kt2_A Mercuric reductase; nme 99.1 4.5E-10 1.5E-14 62.8 6.2 63 4-67 2-66 (69)
34 2aj0_A Probable cadmium-transp 99.0 7.9E-10 2.7E-14 62.6 7.0 61 2-68 3-64 (71)
35 2ofg_X Zinc-transporting ATPas 99.0 1.6E-09 5.3E-14 67.8 8.6 66 1-67 7-75 (111)
36 2ew9_A Copper-transporting ATP 99.0 1.2E-09 4E-14 69.4 7.8 66 2-68 80-148 (149)
37 2ew9_A Copper-transporting ATP 99.0 3.1E-09 1.1E-13 67.4 7.8 67 1-68 3-72 (149)
38 2rop_A Copper-transporting ATP 99.0 4.4E-09 1.5E-13 71.1 8.8 69 2-71 122-193 (202)
39 1p6t_A Potential copper-transp 98.6 2.8E-07 9.7E-12 58.6 8.6 64 1-65 5-71 (151)
40 2rop_A Copper-transporting ATP 98.6 1.8E-07 6E-12 63.1 7.6 60 1-61 19-81 (202)
41 3j09_A COPA, copper-exporting 98.4 9.2E-07 3.1E-11 70.6 7.9 63 3-66 3-68 (723)
42 2raq_A Conserved protein MTH88 89.5 0.68 2.3E-05 28.8 4.6 46 18-63 23-74 (97)
43 2x3d_A SSO6206; unknown functi 88.8 0.78 2.7E-05 28.5 4.5 47 17-63 21-73 (96)
44 3bpd_A Uncharacterized protein 88.6 0.55 1.9E-05 29.4 3.8 47 17-63 22-74 (100)
45 3cq1_A Putative uncharacterize 81.3 1.3 4.5E-05 26.7 3.0 34 3-36 42-81 (103)
46 3lno_A Putative uncharacterize 81.2 1 3.4E-05 27.6 2.4 34 3-36 45-85 (108)
47 2jsx_A Protein NAPD; TAT, proo 79.7 6.2 0.00021 23.8 5.7 47 14-61 17-63 (95)
48 1uwd_A Hypothetical protein TM 77.7 2.9 9.9E-05 25.1 3.7 34 3-36 43-82 (103)
49 2cpq_A FragIle X mental retard 76.3 7.9 0.00027 23.4 5.4 40 18-60 35-74 (91)
50 2jsx_A Protein NAPD; TAT, proo 74.0 7.7 0.00026 23.4 4.9 33 3-35 43-75 (95)
51 2yy3_A Elongation factor 1-bet 65.6 12 0.00042 22.5 4.5 33 4-36 53-87 (91)
52 2qip_A Protein of unknown func 64.6 6.1 0.00021 25.4 3.2 31 40-71 111-142 (165)
53 2nyt_A Probable C->U-editing e 63.0 8.3 0.00028 26.1 3.7 59 3-68 84-145 (190)
54 1t1v_A SH3BGRL3, SH3 domain-bi 62.9 7.2 0.00025 22.3 3.0 35 1-36 1-40 (93)
55 2ko1_A CTR148A, GTP pyrophosph 59.2 20 0.00069 19.7 4.9 31 4-34 47-77 (88)
56 2k1h_A Uncharacterized protein 46.4 46 0.0016 20.0 5.4 42 17-61 39-81 (94)
57 1gh8_A Translation elongation 45.2 42 0.0014 20.0 4.4 31 6-36 53-84 (89)
58 2z30_B TK-subtilisin; thermoco 44.5 35 0.0012 18.6 3.8 25 7-36 36-60 (65)
59 1vbk_A Hypothetical protein PH 43.0 77 0.0026 22.4 6.3 46 15-66 26-73 (307)
60 3pro_C Alpha-lytic protease; P 40.5 28 0.00097 23.1 3.4 41 25-66 112-152 (166)
61 3q9p_A Heat shock protein beta 37.8 19 0.00067 20.6 2.0 23 24-47 13-37 (85)
62 2e9h_A EIF-5, eukaryotic trans 35.7 45 0.0015 22.0 3.8 28 33-62 73-100 (157)
63 2dtj_A Aspartokinase; protein- 34.8 90 0.0031 20.0 7.3 42 27-69 84-130 (178)
64 1pqx_A Conserved hypothetical 34.4 42 0.0014 20.1 3.2 42 17-61 39-81 (91)
65 3go9_A Insulinase family prote 34.4 67 0.0023 23.6 5.0 24 39-63 211-234 (492)
66 2c5s_A THII, probable thiamine 33.8 99 0.0034 22.7 5.8 48 15-66 37-84 (413)
67 2g2k_A EIF-5, eukaryotic trans 33.6 48 0.0016 22.2 3.7 27 33-61 66-92 (170)
68 3gzb_A Putative snoal-like pol 33.0 28 0.00094 23.0 2.3 34 24-58 118-151 (154)
69 2v50_A Multidrug resistance pr 32.0 71 0.0024 26.2 5.1 48 16-64 159-213 (1052)
70 3ami_A Zinc peptidase; alpha/b 31.0 38 0.0013 24.1 3.0 25 38-63 188-212 (445)
71 2kgs_A Uncharacterized protein 30.8 17 0.00059 22.8 1.1 36 17-57 67-102 (132)
72 2ctf_A Vigilin; K homology typ 30.8 62 0.0021 19.3 3.6 41 18-60 48-88 (102)
73 2khp_A Glutaredoxin; thioredox 30.0 49 0.0017 18.1 2.9 34 1-36 5-38 (92)
74 4dx5_A Acriflavine resistance 29.8 71 0.0024 26.2 4.7 45 16-61 159-210 (1057)
75 2cuy_A Malonyl COA-[acyl carri 29.6 88 0.003 21.8 4.7 52 16-69 137-188 (305)
76 2wj5_A Heat shock protein beta 29.5 19 0.00066 21.3 1.1 23 24-47 17-41 (101)
77 1b64_A Elongation factor 1-bet 29.2 94 0.0032 18.5 4.9 32 5-36 54-87 (91)
78 1f60_B Elongation factor EEF1B 28.5 99 0.0034 18.5 4.6 31 6-36 58-90 (94)
79 3cnq_P Subtilisin BPN'; unclea 27.3 53 0.0018 18.1 2.7 19 18-36 53-71 (80)
80 3hrg_A Uncharacterized protein 27.3 95 0.0032 21.4 4.5 36 33-69 208-243 (257)
81 3mcb_A Nascent polypeptide-ass 27.2 53 0.0018 17.9 2.5 24 23-47 7-30 (54)
82 3eoq_A Putative zinc protease; 26.6 51 0.0017 23.0 3.0 25 38-63 181-205 (406)
83 2zzt_A Putative uncharacterize 26.5 43 0.0015 19.8 2.3 17 16-32 12-28 (107)
84 2fi0_A Conserved domain protei 26.3 48 0.0016 18.9 2.4 18 48-65 60-77 (81)
85 4go7_X Aspartokinase; transfer 25.6 1.5E+02 0.0052 19.8 5.9 41 28-69 105-150 (200)
86 3s1t_A Aspartokinase; ACT doma 25.5 1.4E+02 0.0048 19.3 6.2 41 28-69 86-131 (181)
87 3tvi_A Aspartokinase; structur 25.3 2.1E+02 0.0074 21.4 6.8 56 15-71 351-411 (446)
88 3v4k_A DNA DC->DU-editing enzy 24.9 73 0.0025 21.9 3.5 60 4-69 102-162 (203)
89 3amj_B Zinc peptidase inactive 24.8 63 0.0022 22.5 3.2 25 38-63 188-212 (424)
90 1xhj_A Nitrogen fixation prote 24.2 71 0.0024 18.9 2.9 33 3-35 39-79 (88)
91 2pb9_A Phosphomethylpyrimidine 24.2 1.5E+02 0.0051 20.0 4.9 42 19-62 143-187 (195)
92 2zod_A Selenide, water dikinas 23.6 17 0.00059 25.9 0.1 18 10-27 17-39 (345)
93 1hr6_B Beta-MPP, mitochondrial 23.5 61 0.0021 22.8 3.0 25 38-63 187-211 (443)
94 4ap3_A Steroid monooxygenase; 23.0 86 0.0029 23.7 3.9 35 38-72 190-224 (549)
95 3uox_A Otemo; baeyer-villiger 22.7 81 0.0028 23.8 3.7 35 38-72 184-218 (545)
96 2y1y_A Alpha-crystallin B chai 22.6 33 0.0011 19.7 1.2 23 24-47 12-36 (90)
97 2jdj_A HAPK, REDY-like protein 22.6 1.4E+02 0.0049 18.3 5.1 36 1-36 1-44 (105)
98 3aab_A Putative uncharacterize 22.6 24 0.00081 21.5 0.6 23 24-47 40-65 (123)
99 3tzy_A Polyketide synthase PKS 22.2 1.7E+02 0.0058 22.1 5.4 53 16-70 281-333 (491)
100 3l4n_A Monothiol glutaredoxin- 21.9 1.2E+02 0.0039 18.6 3.7 35 1-36 13-51 (127)
101 1pp9_A Ubiquinol-cytochrome C 21.7 71 0.0024 22.6 3.0 25 38-63 193-217 (446)
102 3g74_A Protein of unknown func 21.4 73 0.0025 19.2 2.6 26 49-74 60-85 (100)
103 3gla_A Low molecular weight he 21.3 27 0.00092 20.2 0.6 23 24-47 20-44 (100)
104 3gwf_A Cyclohexanone monooxyge 20.4 94 0.0032 23.5 3.6 36 38-73 177-212 (540)
105 1wn2_A Peptidyl-tRNA hydrolase 20.2 1.6E+02 0.0055 18.1 4.6 25 38-62 94-118 (121)
106 3vow_A Probable DNA DC->DU-edi 20.1 1E+02 0.0036 20.9 3.4 59 4-69 88-149 (190)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.70 E-value=9.2e-17 Score=92.82 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=63.8
Q ss_pred CeEEEEEEEeechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEec
Q 048525 1 MQKIVIKVQVRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETV 70 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~ 70 (86)
|+++.|+|+|+|.+|+.++.++|.+++|| ++.+|. ..++++|.++ +++..|.+.|++.|+.+++|++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~-~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDL-PNKKVCIESE-HSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEET-TTTEEEEEES-SCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEc-CCCEEEEEec-CCHHHHHHHHHHcCCceEecCC
Confidence 78899999999999999999999999999 999999 9999999998 9999999999999999999975
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.63 E-value=2.8e-15 Score=86.93 Aligned_cols=68 Identities=12% Similarity=0.160 Sum_probs=64.2
Q ss_pred CeEEEEEEEeechhhHHHHHHHhccCC-CceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEec
Q 048525 1 MQKIVIKVQVRCDKCRSKAMETAADTD-GVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETV 70 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~~kv~k~l~~~~-GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~ 70 (86)
|+++.|+|+|+|.+|..++.++|.+++ ||.++.+|. ..++++|.+. +++..+.+.|++.|+.+.+|++
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~~~ 72 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISL-EKQLVDVYTT-LPYDFILEKIKKTGKEVRSGKQ 72 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEET-TTTEEEEEES-SCHHHHHHHHHTTSSCEEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEEC-CCCEEEEEEe-CCHHHHHHHHHHhCCCceeeec
Confidence 578899999999999999999999999 999999999 9999999997 9999999999999999988854
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.55 E-value=4.6e-14 Score=81.62 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=63.3
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEe
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s 69 (86)
|+++.|.|+ |+|.+|+.+|.++|.+++||.++.+|. ..++++|..+ .+++..|.+.|++.|+.+++++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVAL-LQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEG-GGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 889999998 999999999999999999999999999 9999999753 2699999999999999999886
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.53 E-value=8.8e-14 Score=79.27 Aligned_cols=66 Identities=23% Similarity=0.336 Sum_probs=61.4
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEe--ccCCCHHHHHHHHHhhcCceeEE
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVT--GDGVDSASLAKRLGKKLGHASLE 68 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~--G~~vDp~~l~~~l~kk~~~aei~ 68 (86)
.+++.|.|+ |+|.+|..++.++|.+++||.++.+|. ..++++|. +. +++..|.+.|++.|+.++++
T Consensus 1 a~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 1 AQTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNF-ALEQAVVSYHGE-TTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp CEEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTT-CCHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCC-CCHHHHHHHHHHcCCceEeC
Confidence 378899999 999999999999999999999999999 99999998 66 99999999999999988764
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.1e-13 Score=85.66 Aligned_cols=72 Identities=18% Similarity=0.243 Sum_probs=66.4
Q ss_pred CeEEEEEEEeechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEeccCCC
Q 048525 1 MQKIVIKVQVRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETVEEMK 74 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~~p~~ 74 (86)
|.++.|+|+|+|.+|..+|.++|.+++||.++.+|. ..++++|.+. +++..|.+.|++.++.+.++...+..
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl-~~~~~~V~~~-~~~~~i~~~i~~~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHL-EDQMVLVHTT-LPSQEVQALLEGTGRQAVLKGMGSGQ 89 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEET-TTTEEEEEES-SCHHHHHHHHHTTTSCEEEEESCCCC
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEEC-CCCEEEEEEe-CCHHHHHHHHHHhCCceEEccCCCCc
Confidence 356889999999999999999999999999999999 9999999998 99999999999999999998766554
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.47 E-value=3.3e-13 Score=78.47 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=62.2
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEec
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETV 70 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~ 70 (86)
|+++.|.|. |+|.+|..+|.++|.+ +||.++.+|. ..++++|.++ ++..|.+.|++.|+.+++++.
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~-~~~~~~v~~~--~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDL-NEAVVAGNKE--DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECS-SEEEEEEEGG--GHHHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEc-cCCEEEEEEC--CHHHHHHHHHHcCCceEecCc
Confidence 788999998 9999999999999999 9999999999 9999999997 999999999999999988753
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.34 E-value=3e-12 Score=71.93 Aligned_cols=63 Identities=21% Similarity=0.341 Sum_probs=57.6
Q ss_pred EEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEE
Q 048525 4 IVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLE 68 (86)
Q Consensus 4 vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~ 68 (86)
+.|+|. |+|.+|..++.++|.+++||.++.+|. ..++++|.+. +++..|.+.|++.|+.+..+
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSL-EKGEALVEGT-ADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECS-SSCBEEECSC-CCHHHHHHHHHTTTCEEEEC
T ss_pred EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEe-CCCEEEECCC-CCHHHHHHHHHHcCCCcEec
Confidence 468888 999999999999999999999999999 9999999877 99999999999999877654
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.31 E-value=4.7e-12 Score=69.64 Aligned_cols=61 Identities=15% Similarity=0.294 Sum_probs=56.5
Q ss_pred EEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCce
Q 048525 3 KIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 3 ~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~a 65 (86)
++.|+|. |+|.+|..++.++|.+++||.++.+|. ..++++|.+. +++..+.+.|++.|+.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDL-TSKKVTITSA-LGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECT-TTCEEEEECS-SCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEe-cCCEEEEEec-CCHHHHHHHHHHcCCCC
Confidence 3678997 999999999999999999999999999 9999999987 99999999999988765
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.30 E-value=1.7e-11 Score=68.88 Aligned_cols=64 Identities=22% Similarity=0.317 Sum_probs=57.0
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCce
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~a 65 (86)
|+++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..|...|.+.|+.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQL-AEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 567889998 999999999999999999999999999 9999999733 278899999999988765
No 10
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.27 E-value=6.1e-11 Score=66.25 Aligned_cols=67 Identities=24% Similarity=0.321 Sum_probs=58.0
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccC-CCHHHHHHHHHhhcCceeEE
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDG-VDSASLAKRLGKKLGHASLE 68 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~-vDp~~l~~~l~kk~~~aei~ 68 (86)
++++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+. +++..+...|...|+.+.++
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNF-ALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 367889999 999999999999999999999999999 99999987542 68889999999998877643
No 11
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.26 E-value=5.9e-11 Score=65.19 Aligned_cols=64 Identities=20% Similarity=0.316 Sum_probs=57.0
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCce
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~a 65 (86)
|.+..|+|. |+|.+|...+.++|.+++||.++.+|. ..+.++|..+ .+++..+...|...|+.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNL-EAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 778899999 999999999999999999999999999 9999999743 268899999999888754
No 12
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.25 E-value=8e-11 Score=67.00 Aligned_cols=65 Identities=22% Similarity=0.210 Sum_probs=57.6
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCcee
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHAS 66 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~ae 66 (86)
|+++.|.|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+...+..|.+.|...|+.+.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~-~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~ 67 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLF-ATEKLVVDADNDIRAQVESALQKAGYSLR 67 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEET-TTTEEEEEESSCCHHHHHHHHHHHTCEEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence 788999999 999999999999999999999999999 99999998763236778888999888764
No 13
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.25 E-value=1.3e-11 Score=74.49 Aligned_cols=63 Identities=21% Similarity=0.197 Sum_probs=58.0
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCce
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~a 65 (86)
|+++.|+|. |+|..|..+|.++|.+++||.++.+|. ..++++|.+. +++..|.+.|++.|+.+
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l-~~~~~~V~~~-~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADP-ASRTVVVGGV-SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEET-TTTEEEEESC-CCHHHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEEC-CCCEEEEEec-CCHHHHHHHHHHcCCCC
Confidence 467889998 999999999999999999999999999 9999999998 99999999999988754
No 14
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.23 E-value=5.1e-11 Score=68.45 Aligned_cols=68 Identities=15% Similarity=0.178 Sum_probs=61.1
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEe
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s 69 (86)
|+++.|+|. |+|..|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+...|...|+.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVAL-MAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBT-TTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 889999998 999999999999999999999999999 9999999754 2678899999999999887763
No 15
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.23 E-value=4.7e-11 Score=84.20 Aligned_cols=70 Identities=11% Similarity=0.218 Sum_probs=64.3
Q ss_pred eEEEEEEEeechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEeccCC
Q 048525 2 QKIVIKVQVRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETVEEM 73 (86)
Q Consensus 2 ~~vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~~p~ 73 (86)
.++.|+|+|+|..|+.+|.++|.+++||.++.+|. ..++++|.+. +++..|.+.|++.++.+.++...+.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl-~~~~v~V~~~-~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDI-EQQIMSVESS-VAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEES-SCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEc-CCCEEEEecc-CCHHHHHHHHHHcCCccccccCCCc
Confidence 45788999999999999999999999999999999 9999999998 9999999999999999998866544
No 16
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.22 E-value=1e-10 Score=65.66 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=59.2
Q ss_pred EEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc-CCCHHHHHHHHHhhcCceeEEe
Q 048525 3 KIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD-GVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 3 ~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~-~vDp~~l~~~l~kk~~~aei~s 69 (86)
++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+...|++.|+.+.+++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISL-VTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBT-TTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 5789998 999999999999999999999999999 9999998743 2789999999999999988774
No 17
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.21 E-value=1.1e-10 Score=65.82 Aligned_cols=66 Identities=20% Similarity=0.328 Sum_probs=58.2
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeE
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASL 67 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei 67 (86)
|+++.|+|. |+|.+|...+.++|.+++||.++.+|. ..+.++|..+ .+++..+...|...|+.+.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL-ATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEG-GGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 567889998 999999999999999999999999999 9999998732 26889999999998887654
No 18
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.21 E-value=5.5e-11 Score=66.77 Aligned_cols=66 Identities=21% Similarity=0.267 Sum_probs=58.4
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeE
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASL 67 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei 67 (86)
|+++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+...|...|+.+.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTF-ETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 357889998 999999999999999999999999999 9999999754 26889999999999987765
No 19
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.19 E-value=1.2e-10 Score=65.36 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=57.7
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccC--CCHHHHHHHHHhhcCceeE
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDG--VDSASLAKRLGKKLGHASL 67 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~--vDp~~l~~~l~kk~~~aei 67 (86)
+++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+. +++..+.+.|...|+.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSL-ANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 46789997 999999999999999999999999999 99999997652 5788999999999887754
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.18 E-value=1.4e-10 Score=69.88 Aligned_cols=67 Identities=19% Similarity=0.247 Sum_probs=58.9
Q ss_pred EEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhh---cCceeEEec
Q 048525 3 KIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKK---LGHASLETV 70 (86)
Q Consensus 3 ~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk---~~~aei~s~ 70 (86)
++.|+|. |+|..|+.+|.++|.+++||.++.+|. ..++++|..+ .+++..|.+.|... ++.+.+++.
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l-~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSL-ENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 5789998 999999999999999999999999999 9999999753 26889999999999 488877653
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.17 E-value=1.3e-10 Score=66.88 Aligned_cols=68 Identities=13% Similarity=0.230 Sum_probs=59.7
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEe
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s 69 (86)
++++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+.+.|+..|+.+.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSL-EEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEG-GGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 356889997 999999999999999999999999999 9999999754 2678999999999999887653
No 22
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.17 E-value=3.3e-10 Score=64.39 Aligned_cols=68 Identities=13% Similarity=0.238 Sum_probs=59.9
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEec
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLETV 70 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s~ 70 (86)
+++.|.|. |+|..|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+...|.+.|+.+.+...
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSL-EEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNI 72 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEeecC
Confidence 45788997 999999999999999999999999999 9999999754 26889999999999998877653
No 23
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.16 E-value=2e-10 Score=65.75 Aligned_cols=68 Identities=16% Similarity=0.249 Sum_probs=60.3
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEe
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s 69 (86)
|.++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+...|...|+.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNF-ALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCS-SSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 778899999 999999999999999999999999999 9999998643 2688999999999998887653
No 24
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.14 E-value=2e-10 Score=82.39 Aligned_cols=69 Identities=12% Similarity=0.229 Sum_probs=63.9
Q ss_pred EEEEEEEeechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEeccCC
Q 048525 3 KIVIKVQVRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETVEEM 73 (86)
Q Consensus 3 ~vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~~p~ 73 (86)
++.|+|+|+|..|+.+|.++|.+++||.++.+|. ..++++|.+. +++..|.+.|++.++.+.++...+.
T Consensus 8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl-~~~~v~V~~~-~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDI-EQQIMSVESS-VAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEES-SCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEc-CCCeEEEecC-CCHHHHHHHHHHhCCCcccccCCcc
Confidence 4778899999999999999999999999999999 9999999998 9999999999999999998876554
No 25
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.14 E-value=2.5e-10 Score=63.18 Aligned_cols=63 Identities=22% Similarity=0.346 Sum_probs=55.9
Q ss_pred EEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeE
Q 048525 4 IVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASL 67 (86)
Q Consensus 4 vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei 67 (86)
+.|+|. |+|.+|...+.++|.+++||.++.+|. ..+.++|..+ .+++..+.+.|++.|+.+++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQL-KKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 357887 999999999999999999999999999 9999999764 26889999999999888765
No 26
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.12 E-value=3.3e-10 Score=62.71 Aligned_cols=64 Identities=20% Similarity=0.279 Sum_probs=56.4
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCce
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~a 65 (86)
|.++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..+...+...|+.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTV-ATGRLTVTYDPKQVSEITIQERIAALGYTL 68 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEET-TTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 467889999 999999999999999999999999999 9999999743 267889999999888755
No 27
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.12 E-value=3.6e-10 Score=63.82 Aligned_cols=67 Identities=13% Similarity=0.199 Sum_probs=57.9
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccC--CCHHHHHHHHHhhcCceeEEe
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDG--VDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~--vDp~~l~~~l~kk~~~aei~s 69 (86)
+++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+. +++..+...|...|+.+.+..
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVAL-ATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEET-TTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence 45789998 999999999999999999999999999 99999997651 467889999999888776543
No 28
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.11 E-value=9e-11 Score=66.05 Aligned_cols=61 Identities=21% Similarity=0.318 Sum_probs=54.8
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCcee
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHAS 66 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~ae 66 (86)
|+ +.|.|. |+|.+|..++.++|.++ ||.++.+|. ..++++|.++ .+ ..+...|++.|+.+.
T Consensus 1 m~-~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~-~~~~~~v~~~-~~-~~i~~~i~~~Gy~~~ 62 (67)
T 2kyz_A 1 MR-YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSV-EEKKVVVETE-NL-DSVLKKLEEIDYPVE 62 (67)
T ss_dssp CE-EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEET-TTTEEEEECS-CH-HHHHHHHHTTTCCCC
T ss_pred Ce-EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEEC-CCCEEEEEEC-CH-HHHHHHHHHcCCcee
Confidence 54 679996 99999999999999999 999999999 9999999988 55 889999999888664
No 29
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.11 E-value=2.6e-10 Score=67.07 Aligned_cols=67 Identities=13% Similarity=0.188 Sum_probs=59.1
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEe
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s 69 (86)
+++.|+|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ .+++..|.+.|...|+.+.+++
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSL-DNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECS-TTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 46789997 999999999999999999999999999 9999999764 2688999999999998876553
No 30
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.08 E-value=5.3e-10 Score=71.44 Aligned_cols=68 Identities=16% Similarity=0.242 Sum_probs=60.0
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEec
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLETV 70 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s~ 70 (86)
.++.|.|. |+|..|..++.++|.+++||.++.++. ..++++|.-+ .+++..|.+.|+..|+.+.+++.
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNF-ALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEET-TTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 45789997 999999999999999999999999999 9999999732 27999999999999998877543
No 31
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.07 E-value=1.1e-09 Score=65.94 Aligned_cols=70 Identities=23% Similarity=0.214 Sum_probs=61.3
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccC--CCHHHHHHHHHhhcCceeEEecc
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDG--VDSASLAKRLGKKLGHASLETVE 71 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~--vDp~~l~~~l~kk~~~aei~s~~ 71 (86)
|.++.|.|. |+|.+|...+.++|..++||.++.+|. ..+.++|..+. +++..|...|...|+.+.+...+
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 87 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIV-PSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG 87 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence 567889998 999999999999999999999999999 99999997652 57889999999999988776543
No 32
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.06 E-value=5.4e-10 Score=61.49 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=54.2
Q ss_pred EEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc-CCCHHHHHHHHHhhcCce
Q 048525 3 KIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD-GVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 3 ~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~-~vDp~~l~~~l~kk~~~a 65 (86)
++.|.|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ ..++..|.+.|++.|+.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSV-EKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEET-TTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEc-CCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 4678887 999999999999999999999999999 9999999754 257888999999887643
No 33
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.06 E-value=4.5e-10 Score=62.76 Aligned_cols=63 Identities=22% Similarity=0.277 Sum_probs=55.2
Q ss_pred EEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc-CCCHHHHHHHHHhhcCceeE
Q 048525 4 IVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD-GVDSASLAKRLGKKLGHASL 67 (86)
Q Consensus 4 vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~-~vDp~~l~~~l~kk~~~aei 67 (86)
+.|.|. |+|.+|..++.++|.+++||.++.+|. ..+.++|..+ ..++..|...|+..|+.+.+
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 2 THLKITGMTCDSCAAHVKEALEKVPGVQSALVSY-PKGTAQLAIVPGTSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CCEEEESSCSTHHHHHHHHHHHHSTTEEEEEEET-TTTEEEEEECTTSCHHHHHHHHHTTTSEEEC
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeeEEEEEc-cCCEEEEEECCCCCHHHHHHHHHHCCCceEe
Confidence 357887 999999999999999999999999999 9999988654 26889999999999887654
No 34
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.05 E-value=7.9e-10 Score=62.59 Aligned_cols=61 Identities=20% Similarity=0.383 Sum_probs=52.2
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEE
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLE 68 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~ 68 (86)
+++.|.|. |+|.+|..++.++|.+++||.++.+|. ..+.++|.++ .+ ...|.+.|+.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~----~~~i~~~Gy~~~~~ 64 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNF-GASKITVTGE-AS----IQQVEQAGAFEHLK 64 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECC-SSEEEEEEES-CC----HHHHHHHHTTTTCE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEC-CCCEEEEEec-Cc----HHHHHHhCCCcccc
Confidence 47889999 999999999999999999999999999 9999999988 55 44667777755433
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.04 E-value=1.6e-09 Score=67.76 Aligned_cols=66 Identities=18% Similarity=0.250 Sum_probs=58.6
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeE
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASL 67 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei 67 (86)
|+++.|+|. |+|..|+.+|.++|.+++||.++.+|. ..++++|..+ .+++..|...|...|+.+..
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~-~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTV-ATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEET-TTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEC-CCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 677899998 999999999999999999999999999 9999999754 25788999999998887653
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.03 E-value=1.2e-09 Score=69.38 Aligned_cols=66 Identities=20% Similarity=0.254 Sum_probs=58.5
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEE
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLE 68 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~ 68 (86)
.++.|+|. |+|.+|..++.++|.+++||.++.+|. ..++++|..+ .+++..|.+.|.+.|+.+.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVAL-ATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEET-TTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEc-CCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 35789998 999999999999999999999999999 9999999765 258899999999999887653
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.96 E-value=3.1e-09 Score=67.41 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=59.5
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEE
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLE 68 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~ 68 (86)
|+++.|.|. |+|.+|...+.++|.+++||.++.++. ..++++|..+ .+++..+...|...|+.+.++
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVAL-MAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEe-cCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 688999998 999999999999999999999999999 8899998643 267889999999988887654
No 38
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.95 E-value=4.4e-09 Score=71.07 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=59.3
Q ss_pred eEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCceeEEecc
Q 048525 2 QKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHASLETVE 71 (86)
Q Consensus 2 ~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~aei~s~~ 71 (86)
.++.|+|. |+|.+|..+|.++|.+++||.++.+|. ..++++|..+ .+++..|...|...|+.+.++...
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 193 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSL-AEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES 193 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC---
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCC
Confidence 35789998 999999999999999999999999999 9999999743 268999999999999998877543
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.62 E-value=2.8e-07 Score=58.56 Aligned_cols=64 Identities=20% Similarity=0.329 Sum_probs=54.5
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCce
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~a 65 (86)
|++..|.|. |+|.+|..++.++|.+++||.++.++. ..+.++|..+ .+++..+...++..++.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL-ATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEG-GGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEc-cCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 456789998 999999999999999999999999999 8899888633 268888999998877643
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.59 E-value=1.8e-07 Score=63.11 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=53.2
Q ss_pred CeEEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhh
Q 048525 1 MQKIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKK 61 (86)
Q Consensus 1 m~~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk 61 (86)
|.++.|+|. |+|.+|..+|.++|.+++||.++.++. ..++++|..+ .+++..|...|...
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSL-ENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 457889999 999999999999999999999999999 9999999754 26788999999987
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.38 E-value=9.2e-07 Score=70.64 Aligned_cols=63 Identities=14% Similarity=0.224 Sum_probs=57.0
Q ss_pred EEEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEecc--CCCHHHHHHHHHhhcCcee
Q 048525 3 KIVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGD--GVDSASLAKRLGKKLGHAS 66 (86)
Q Consensus 3 ~vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~--~vDp~~l~~~l~kk~~~ae 66 (86)
++.|+|+ |+|.+|+.++.+++.+++||.++.++. ..++++|..+ .+++..+.+.+++.++.+.
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl-~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~ 68 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNL-ATETAFIRFDEKRIDFETIKRVIEDLGYGVV 68 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEc-CCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence 4789999 999999999999999999999999999 9999999643 2799999999999988764
No 42
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=89.49 E-value=0.68 Score=28.81 Aligned_cols=46 Identities=15% Similarity=0.259 Sum_probs=35.1
Q ss_pred HHHHHhccCCCceEEEe-----cCC-ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 18 KAMETAADTDGVISVSL-----QGK-YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 18 kv~k~l~~~~GV~sV~v-----d~~-~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
.+-+.|++++||..|.+ |.+ .+=++|+.|+.+|...+.+.|.+.|+
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 74 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 45567888888877643 331 23358999999999999999999876
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=88.80 E-value=0.78 Score=28.49 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=36.1
Q ss_pred HHHHHHhccCCCceEEEe-----cCC-ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 17 SKAMETAADTDGVISVSL-----QGK-YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 17 ~kv~k~l~~~~GV~sV~v-----d~~-~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
-.+-+.|++++||..|.+ |.+ .+=++|+.|+.+|...+.+.|.+.|.
T Consensus 21 vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 21 VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGC 73 (96)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 345678889999887654 331 23358999999999999999999876
No 44
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=88.62 E-value=0.55 Score=29.36 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=36.2
Q ss_pred HHHHHHhccCCCceEEEe-----cCC-ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 17 SKAMETAADTDGVISVSL-----QGK-YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 17 ~kv~k~l~~~~GV~sV~v-----d~~-~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
-.+-+.|++++||..|.+ |.+ .+=++|+.|+.+|...+.+.|.+.|.
T Consensus 22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG 74 (100)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 345678899999887654 331 23358999999999999999999876
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=81.28 E-value=1.3 Score=26.74 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=26.3
Q ss_pred EEEEEEEeechhhH------HHHHHHhccCCCceEEEecC
Q 048525 3 KIVIKVQVRCDKCR------SKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 3 ~vvlkV~m~C~~C~------~kv~k~l~~~~GV~sV~vd~ 36 (86)
.+.+.+.+.+.+|. ..+..+|..++||.+|+++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEE
Confidence 35566667777774 67888999999999998875
No 46
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=81.15 E-value=1 Score=27.64 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=26.7
Q ss_pred EEEEEEEeechhh------HHHHHHHh-ccCCCceEEEecC
Q 048525 3 KIVIKVQVRCDKC------RSKAMETA-ADTDGVISVSLQG 36 (86)
Q Consensus 3 ~vvlkV~m~C~~C------~~kv~k~l-~~~~GV~sV~vd~ 36 (86)
.+.+.+.+...+| ...+..+| ..++||.+|.+..
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 3566677777777 56788899 8999999998875
No 47
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=79.71 E-value=6.2 Score=23.83 Aligned_cols=47 Identities=13% Similarity=0.075 Sum_probs=32.0
Q ss_pred hhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhh
Q 048525 14 KCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKK 61 (86)
Q Consensus 14 ~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk 61 (86)
+=...+..+|..++||+--..|. ..+++.|+=++-+...+.+.|.+.
T Consensus 17 ~~~~~V~~~L~~ipgvEi~~~~~-~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCEVAVSDA-PSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TSHHHHHHHHTTSTTEEEEEEET-TTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEecC-CCCCEEEEEEeCCHHHHHHHHHHH
Confidence 55788999999999996545565 566755533323777777766543
No 48
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=77.75 E-value=2.9 Score=25.11 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=25.5
Q ss_pred EEEEEEEeechhhH------HHHHHHhccCCCceEEEecC
Q 048525 3 KIVIKVQVRCDKCR------SKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 3 ~vvlkV~m~C~~C~------~kv~k~l~~~~GV~sV~vd~ 36 (86)
.+.+.+.+...+|. ..+..+|..++||.+|+++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEE
Confidence 35566666666664 56788899999999998875
No 49
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=76.29 E-value=7.9 Score=23.38 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=29.0
Q ss_pred HHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHh
Q 048525 18 KAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGK 60 (86)
Q Consensus 18 kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~k 60 (86)
+.-+.+....|+.+|+++. +.+.|++.|. |.+.+-++...
T Consensus 35 k~Ik~I~e~tGv~~IdI~e-ddG~V~I~g~--~~ea~~~A~~~ 74 (91)
T 2cpq_A 35 SNIQQARKVPGVTAIELDE-DTGTFRIYGE--SADAVKKARGF 74 (91)
T ss_dssp HHHHHHHTSTTEEEEEEET-TTTEEEEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEEEc-CCCEEEEEEC--CHHHHHHHHHH
Confidence 3445566678998899986 6799999996 67766555443
No 50
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=73.98 E-value=7.7 Score=23.41 Aligned_cols=33 Identities=21% Similarity=0.451 Sum_probs=26.4
Q ss_pred EEEEEEEeechhhHHHHHHHhccCCCceEEEec
Q 048525 3 KIVIKVQVRCDKCRSKAMETAADTDGVISVSLQ 35 (86)
Q Consensus 3 ~vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~vd 35 (86)
++++.+.-...+=-......|..++||.|+.+=
T Consensus 43 kiVV~iEa~~~~~l~~~i~~I~~i~GVlst~lv 75 (95)
T 2jsx_A 43 QLIVVVEAEDSETLIQTIESVRNVEGVLAVSLV 75 (95)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTSTTEEEEEES
T ss_pred CEEEEEEeCCHHHHHHHHHHHhcCCCccEEeEE
Confidence 477788877666666677999999999998864
No 51
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=65.57 E-value=12 Score=22.54 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=24.7
Q ss_pred EEEEEEeechhh--HHHHHHHhccCCCceEEEecC
Q 048525 4 IVIKVQVRCDKC--RSKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 4 vvlkV~m~C~~C--~~kv~k~l~~~~GV~sV~vd~ 36 (86)
+.+.+-|..+.. -..+..+++.++||+|+++-.
T Consensus 53 L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 53 LKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEEEEEEECCCccccHHHHHHHhcCCCceEEEEEE
Confidence 334444555644 888999999999999999853
No 52
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=64.61 E-value=6.1 Score=25.44 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=27.1
Q ss_pred ceEEEeccCCCHHHHHHHHHhh-cCceeEEecc
Q 048525 40 DTVVVTGDGVDSASLAKRLGKK-LGHASLETVE 71 (86)
Q Consensus 40 ~~vtV~G~~vDp~~l~~~l~kk-~~~aei~s~~ 71 (86)
.-+.|+|+ -|-.-++++||.. |..+.++++.
T Consensus 111 ~~vLvSgD-~DF~plv~~lr~~~G~~V~v~g~~ 142 (165)
T 2qip_A 111 RVILVSGD-GDFSLLVERIQQRYNKKVTVYGVP 142 (165)
T ss_dssp EEEEECCC-GGGHHHHHHHHHHHCCEEEEEECG
T ss_pred EEEEEECC-hhHHHHHHHHHHHcCcEEEEEeCC
Confidence 35888999 7999999999997 9999999864
No 53
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=62.97 E-value=8.3 Score=26.12 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=40.4
Q ss_pred EEEEEEEee-chhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCH--HHHHHHHHhhcCceeEE
Q 048525 3 KIVIKVQVR-CDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDS--ASLAKRLGKKLGHASLE 68 (86)
Q Consensus 3 ~vvlkV~m~-C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp--~~l~~~l~kk~~~aei~ 68 (86)
.++|=|.+. |..|+..|..++..-+||..|.+-. . ..+. -|| ..-+..|+..|=.++++
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~-~-----d~~~-~~p~~~~g~~~L~~aGI~V~~~ 145 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVG-R-----LFMW-EEPEIQAALKKLKEAGCKLRIM 145 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEe-e-----cCCc-CChHHHHHHHHHHHCCCEEEEe
Confidence 356777755 9999999999999999999988743 1 1111 123 35567777766566554
No 54
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=62.88 E-value=7.2 Score=22.29 Aligned_cols=35 Identities=6% Similarity=-0.060 Sum_probs=26.6
Q ss_pred CeEEEEEEEeechhhH-----HHHHHHhccCCCceEEEecC
Q 048525 1 MQKIVIKVQVRCDKCR-----SKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~-----~kv~k~l~~~~GV~sV~vd~ 36 (86)
|.+|+|-..-.|.-|. .++++.|... ||.-..+|.
T Consensus 1 M~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di 40 (93)
T 1t1v_A 1 MSGLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDI 40 (93)
T ss_dssp CCCEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEET
T ss_pred CCCEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEEC
Confidence 7778887778899997 8888888764 776555555
No 55
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=59.21 E-value=20 Score=19.68 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=19.7
Q ss_pred EEEEEEeechhhHHHHHHHhccCCCceEEEe
Q 048525 4 IVIKVQVRCDKCRSKAMETAADTDGVISVSL 34 (86)
Q Consensus 4 vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~v 34 (86)
++|.++.....-...+...|.+++||.+|..
T Consensus 47 ~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 47 CNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 3444444444555677778888888877654
No 56
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=46.44 E-value=46 Score=20.00 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=31.0
Q ss_pred HHHHHHhccCCCceEEEecCCccceEEEecc-CCCHHHHHHHHHhh
Q 048525 17 SKAMETAADTDGVISVSLQGKYKDTVVVTGD-GVDSASLAKRLGKK 61 (86)
Q Consensus 17 ~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~-~vDp~~l~~~l~kk 61 (86)
+-+-+.|-+++||.+|-+.. +=+||+-. .+|-..|...++..
T Consensus 39 SPLA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~I~~~ 81 (94)
T 2k1h_A 39 PEFINRLFEIEGVKSIFYVL---DFISIDKEDNANWNELLPQIENT 81 (94)
T ss_dssp CHHHHHHHTSTTEEEEEEET---TEEEEEECTTCCHHHHHHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHHH
Confidence 34555666899999999964 78999764 37888887776643
No 57
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=45.19 E-value=42 Score=20.00 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=23.0
Q ss_pred EEEEeec-hhhHHHHHHHhccCCCceEEEecC
Q 048525 6 IKVQVRC-DKCRSKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 6 lkV~m~C-~~C~~kv~k~l~~~~GV~sV~vd~ 36 (86)
+.+-+.. .+--..+..+++.++||+|+++-.
T Consensus 53 i~~vveD~~~~td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 53 VMVVVGDAEGGTEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp EEEEESSSCGGGGHHHHHHTTSCSSEEEEEEE
T ss_pred EEEEEEcCCcChHHHHHHHhccCCccEEEEEE
Confidence 3333443 366778889999999999999864
No 58
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=44.46 E-value=35 Score=18.55 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=18.5
Q ss_pred EEEeechhhHHHHHHHhccCCCceEEEecC
Q 048525 7 KVQVRCDKCRSKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 7 kV~m~C~~C~~kv~k~l~~~~GV~sV~vd~ 36 (86)
-+.+.+.. .+.|.+.+||..|+-|.
T Consensus 36 ~~~lp~~~-----~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 36 VVDVPANA-----VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp EEEECGGG-----HHHHHTSTTEEEEEECC
T ss_pred EEEeCHHH-----HHHHhcCCCceEEecCc
Confidence 44555544 35688999999999986
No 59
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=43.03 E-value=77 Score=22.39 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred hHHHHHHHhccCCCce--EEEecCCccceEEEeccCCCHHHHHHHHHhhcCcee
Q 048525 15 CRSKAMETAADTDGVI--SVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHAS 66 (86)
Q Consensus 15 C~~kv~k~l~~~~GV~--sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~ae 66 (86)
..+.|+++|.. +++. +|.- ..+++.|.++ |+..++++|++.++=+.
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~---~~gri~V~~~--~~~~~~~~L~~vfGI~~ 73 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFS---RHGRIIVKTN--SPKEAANVLVRVFGIVS 73 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEE---ETTEEEEECS--CHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHhcc-cCccceeEEE---ECCEEEEEcC--CHHHHHHHHhhcCCeEE
Confidence 66778888877 6666 3655 5588888865 88899999988665433
No 60
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=40.51 E-value=28 Score=23.06 Aligned_cols=41 Identities=20% Similarity=0.110 Sum_probs=25.3
Q ss_pred cCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCcee
Q 048525 25 DTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHAS 66 (86)
Q Consensus 25 ~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~ae 66 (86)
.-.||.+-.+|. ..|+|+|.-+.=.+......++..+-.+.
T Consensus 112 ~~~~v~~W~VD~-~tN~VVV~a~~~~~~aa~~f~~~AG~~~~ 152 (166)
T 3pro_C 112 PLDGVQSWYVDP-RSNAVVVKVDDGATDAGVDFVALSGADSA 152 (166)
T ss_dssp -CTTEEEEEEEG-GGTEEEEEEETTCHHHHHHHHHHHTCCTT
T ss_pred CCCCCceEEEeC-CCCeEEEEeCCCChHHHHHHHHHhCCCCC
Confidence 346788999999 99999997752234443333344343433
No 61
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=37.83 E-value=19 Score=20.59 Aligned_cols=23 Identities=17% Similarity=0.277 Sum_probs=18.8
Q ss_pred ccCCCc--eEEEecCCccceEEEecc
Q 048525 24 ADTDGV--ISVSLQGKYKDTVVVTGD 47 (86)
Q Consensus 24 ~~~~GV--~sV~vd~~~~~~vtV~G~ 47 (86)
..+||+ +.|.+.. ..+.|+|.|.
T Consensus 13 ~dlPG~~~edi~V~v-~~~~L~I~g~ 37 (85)
T 3q9p_A 13 LDVNHFAPDELTVKT-KDGVVEITGK 37 (85)
T ss_dssp EECTTTCCSEEEEEE-ETTEEEEEEE
T ss_pred EECCCCChHHEEEEE-ECCEEEEEEE
Confidence 357887 5688888 8899999998
No 62
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.69 E-value=45 Score=22.00 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=23.5
Q ss_pred EecCCccceEEEeccCCCHHHHHHHHHhhc
Q 048525 33 SLQGKYKDTVVVTGDGVDSASLAKRLGKKL 62 (86)
Q Consensus 33 ~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~ 62 (86)
.+|. ..+++.|.|. +++..|-+.|++..
T Consensus 73 ~id~-~~~rlii~G~-~~~~~i~~~L~~yI 100 (157)
T 2e9h_A 73 QFDV-KNDRYIVNGS-HEANKLQDMLDGFI 100 (157)
T ss_dssp EEET-TTTEEEEEBC-CCHHHHHHHHHHHH
T ss_pred eecC-CCCEEEEEee-eCHHHHHHHHHHHH
Confidence 4664 6899999999 99999999998753
No 63
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=34.76 E-value=90 Score=19.99 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=30.7
Q ss_pred CCceEEEecCCccceEEEeccCCC-----HHHHHHHHHhhcCceeEEe
Q 048525 27 DGVISVSLQGKYKDTVVVTGDGVD-----SASLAKRLGKKLGHASLET 69 (86)
Q Consensus 27 ~GV~sV~vd~~~~~~vtV~G~~vD-----p~~l~~~l~kk~~~aei~s 69 (86)
-|...++++. .-..|+|.|.++. ...+.+.|.+.+-+...++
T Consensus 84 ~~~~~v~~~~-~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 84 GNWTNVLYDD-QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp TTCSEEEEES-CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cCCCeEEEeC-CeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 3567788887 7889999998763 3477777877666666665
No 64
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=34.39 E-value=42 Score=20.06 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=29.9
Q ss_pred HHHHHHhccCCCceEEEecCCccceEEEecc-CCCHHHHHHHHHhh
Q 048525 17 SKAMETAADTDGVISVSLQGKYKDTVVVTGD-GVDSASLAKRLGKK 61 (86)
Q Consensus 17 ~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~-~vDp~~l~~~l~kk 61 (86)
+-+-+.|-.++||.+|-+.. +=+||+-. .+|-..|...++..
T Consensus 39 SPLA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~V~~~ 81 (91)
T 1pqx_A 39 PAFINDILKVEGVKSIFHVM---DFISVDKENDANWETVLPKVEAV 81 (91)
T ss_dssp CHHHHHHHHSTTEEEEEEET---TEEEEEECTTSCSTTTHHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHHH
Confidence 34455666899999999964 78999764 36777776666543
No 65
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=34.37 E-value=67 Score=23.61 Aligned_cols=24 Identities=38% Similarity=0.537 Sum_probs=20.3
Q ss_pred cceEEEeccCCCHHHHHHHHHhhcC
Q 048525 39 KDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 39 ~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
+-.+.|.|+ +|+..+.+.+++.+.
T Consensus 211 n~~l~vvGd-vd~~~~~~~i~~~f~ 234 (492)
T 3go9_A 211 AMTLYVVGN-VDSRSIAAQISKAFS 234 (492)
T ss_dssp GEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred ceEEEEEcC-CCHHHHHHHHHHHhh
Confidence 446889999 999999999988754
No 66
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=33.84 E-value=99 Score=22.67 Aligned_cols=48 Identities=13% Similarity=0.211 Sum_probs=31.9
Q ss_pred hHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCcee
Q 048525 15 CRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHAS 66 (86)
Q Consensus 15 C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~ae 66 (86)
..+.|+++|..++++. +.. ..+++.|..++-|+..++++|++.++=+.
T Consensus 37 L~~ni~~~l~~~~~~~---v~~-~~gri~v~~~~~~~~~~~~~L~~vfGI~~ 84 (413)
T 2c5s_A 37 LKDNVKFKLKKFPNIK---IDA-THDRMYIQLNGEDHEAVSERLKDVFGIHK 84 (413)
T ss_dssp HHHHHHHHTTTSTTCE---EEE-CSSCEEEECTTCCHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHhhcCceE---EEE-ECCEEEEEeCCCCHHHHHHHHhhCCCeEE
Confidence 5567777887775543 444 56788886553478888888888665433
No 67
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=33.61 E-value=48 Score=22.16 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=22.9
Q ss_pred EecCCccceEEEeccCCCHHHHHHHHHhh
Q 048525 33 SLQGKYKDTVVVTGDGVDSASLAKRLGKK 61 (86)
Q Consensus 33 ~vd~~~~~~vtV~G~~vDp~~l~~~l~kk 61 (86)
.+|. ..+++.|.|. +++..|-..|++.
T Consensus 66 ~id~-~~~rliinG~-~~~~~i~~~L~~y 92 (170)
T 2g2k_A 66 QFDV-KNDRYIVNGS-HEANKLQDMLDGF 92 (170)
T ss_dssp EECT-TTCCEEEEBC-CCHHHHHHHHHHH
T ss_pred eecC-CCCEEEEEee-eCHHHHHHHHHHH
Confidence 4665 6899999999 9999999998764
No 68
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=33.00 E-value=28 Score=22.96 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=26.8
Q ss_pred ccCCCceEEEecCCccceEEEeccCCCHHHHHHHH
Q 048525 24 ADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRL 58 (86)
Q Consensus 24 ~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l 58 (86)
-++|||+.+..|+ .+.+|+=.=+=+|-..+...|
T Consensus 118 ~aiPGVTtlklDm-~~~Rv~eh~DlmDyqTm~DQl 151 (154)
T 3gzb_A 118 VAIPAVTSLKLDM-LNRRVTEHVDLIDYQTMSDQL 151 (154)
T ss_dssp EEEEEEEEEEEET-TTTEEEEEEEEECHHHHHHHH
T ss_pred EecCceEEEeecC-CccchhhhHhHHhHHHHHHHh
Confidence 3689999999999 888988765546777776655
No 69
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=31.97 E-value=71 Score=26.24 Aligned_cols=48 Identities=10% Similarity=0.129 Sum_probs=37.9
Q ss_pred HHHHHHHhccCCCceEEEecCCccceEEE-------eccCCCHHHHHHHHHhhcCc
Q 048525 16 RSKAMETAADTDGVISVSLQGKYKDTVVV-------TGDGVDSASLAKRLGKKLGH 64 (86)
Q Consensus 16 ~~kv~k~l~~~~GV~sV~vd~~~~~~vtV-------~G~~vDp~~l~~~l~kk~~~ 64 (86)
...++..|.+++||.+|.++. ...++.| ...|+++.+|.+.|+.....
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g-~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~~~~ 213 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFG-SQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQNVQ 213 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESS-CCEEEEEEECHHHHTTTTCCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCCCceEEEecC-CcEEEEEEeCHHHHHHcCCCHHHHHHHHHhcCcc
Confidence 456889999999999999987 6666666 23468999999999876543
No 70
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=31.01 E-value=38 Score=24.06 Aligned_cols=25 Identities=32% Similarity=0.485 Sum_probs=20.7
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
.+-.+.|.|+ +|+..+...+++.+.
T Consensus 188 ~n~~l~vvGd-~d~~~~~~~v~~~f~ 212 (445)
T 3ami_A 188 NNATVVVVGD-VEHEAVFRLAEQTYG 212 (445)
T ss_dssp GGEEEEEEES-CCHHHHHHHHHHTGG
T ss_pred cceEEEEEcC-CCHHHHHHHHHHHhc
Confidence 3456889999 999999999988654
No 71
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=30.82 E-value=17 Score=22.78 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=21.5
Q ss_pred HHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHH
Q 048525 17 SKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKR 57 (86)
Q Consensus 17 ~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~ 57 (86)
..+++.+..++ .++++. +.+.||++|. ++...-.+.
T Consensus 67 ~~aL~~~~~l~---~i~V~V-~~g~VtLsG~-v~s~~~r~~ 102 (132)
T 2kgs_A 67 EPVFTASVPIP---DFGLKV-ERDTVTLTGT-APSSEHKDA 102 (132)
T ss_dssp HHHHHHHTTCT---TCEEEE-EETEEEEECE-ESSHHHHHH
T ss_pred HHHHHhcCcCC---ceEEEE-ECCEEEEEEE-ECCHHHHHH
Confidence 34445545554 334444 6789999999 776544333
No 72
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=30.76 E-value=62 Score=19.30 Aligned_cols=41 Identities=10% Similarity=0.179 Sum_probs=25.7
Q ss_pred HHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHh
Q 048525 18 KAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGK 60 (86)
Q Consensus 18 kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~k 60 (86)
.+++......|| .|.+.. ..+.+++.|..-+.......|..
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~-~~~~ItI~G~~~~V~~a~~~I~~ 88 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTE-GEDKITLEGPTEDVSVAQEQIEG 88 (102)
T ss_dssp HHHHHHHHCSSS-EEEECS-SSCEEEEEECHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCCc-EEEeCC-CCCEEEEECCHHHHHHHHHHHHH
Confidence 445555556676 577776 67899999983344444444443
No 73
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=29.96 E-value=49 Score=18.07 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=20.1
Q ss_pred CeEEEEEEEeechhhHHHHHHHhccCCCceEEEecC
Q 048525 1 MQKIVIKVQVRCDKCRSKAMETAADTDGVISVSLQG 36 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~~kv~k~l~~~~GV~sV~vd~ 36 (86)
|..+++--.-.|..|.+ ++..|... |+.-..+|.
T Consensus 5 m~~v~ly~~~~C~~C~~-~~~~L~~~-~i~~~~~di 38 (92)
T 2khp_A 5 MVDVIIYTRPGCPYCAR-AKALLARK-GAEFNEIDA 38 (92)
T ss_dssp CCCEEEEECTTCHHHHH-HHHHHHHT-TCCCEEEES
T ss_pred cccEEEEECCCChhHHH-HHHHHHHc-CCCcEEEEC
Confidence 44566655567999974 55566544 554444443
No 74
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=29.84 E-value=71 Score=26.19 Aligned_cols=45 Identities=13% Similarity=0.174 Sum_probs=35.3
Q ss_pred HHHHHHHhccCCCceEEEecCCccceEEE-------eccCCCHHHHHHHHHhh
Q 048525 16 RSKAMETAADTDGVISVSLQGKYKDTVVV-------TGDGVDSASLAKRLGKK 61 (86)
Q Consensus 16 ~~kv~k~l~~~~GV~sV~vd~~~~~~vtV-------~G~~vDp~~l~~~l~kk 61 (86)
...++..|.+++||.+|.+.. ...++.| ...|+++.++.+.|+..
T Consensus 159 ~~~i~~~l~~i~gv~~v~~~g-~~~~i~i~~d~~~l~~~glt~~~v~~~l~~~ 210 (1057)
T 4dx5_A 159 AANMKDAISRTSGVGDVQLFG-SQYAMRIWMNPNELNKFQLTPVDVITAIKAQ 210 (1057)
T ss_dssp HHHTHHHHHTSTTEEEEEESS-CCEEEEEEECHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecC-CcEEEEEEeCHHHHHHcCCCHHHHHHHHHHh
Confidence 467888999999999999988 4444555 23458889999999874
No 75
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=29.63 E-value=88 Score=21.83 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=35.3
Q ss_pred HHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEe
Q 048525 16 RSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 16 ~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s 69 (86)
...+...+...+||.=.-++ ..++++|.|+.-+...+...|+..+..+..+.
T Consensus 137 ~~~v~~~l~~~~~v~iA~~N--sp~~~visG~~~~l~~~~~~l~~~g~~~~~L~ 188 (305)
T 2cuy_A 137 LEEIQKALEGLEGVEIANLN--APEQTVISGRRQAVEEAAERLKERRARVVFLP 188 (305)
T ss_dssp HHHHHHHHTTCSSEEEEEEE--ETTEEEEEEEHHHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHhhcCCeEEEEEe--cCCcEEEEcCHHHHHHHHHHHHhCCceEEECC
Confidence 45677777777785444444 57889999994456677788887665555443
No 76
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=29.54 E-value=19 Score=21.30 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=17.8
Q ss_pred ccCCCce--EEEecCCccceEEEecc
Q 048525 24 ADTDGVI--SVSLQGKYKDTVVVTGD 47 (86)
Q Consensus 24 ~~~~GV~--sV~vd~~~~~~vtV~G~ 47 (86)
..+||+. .|.+.. ..+.|+|.|.
T Consensus 17 ~dlPG~~~edI~V~v-~~~~L~I~g~ 41 (101)
T 2wj5_A 17 LDVKHFSPEEISVKV-VGDHVEVHAR 41 (101)
T ss_dssp EECTTSCGGGEEEEE-ETTEEEEEEE
T ss_pred EECCCCcHHHeEEEE-ECCEEEEEEE
Confidence 3578874 477777 7789999997
No 77
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=29.19 E-value=94 Score=18.49 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=23.9
Q ss_pred EEEEEeec-hhhHHHHHHHhccCCC-ceEEEecC
Q 048525 5 VIKVQVRC-DKCRSKAMETAADTDG-VISVSLQG 36 (86)
Q Consensus 5 vlkV~m~C-~~C~~kv~k~l~~~~G-V~sV~vd~ 36 (86)
.+.+-+.. .+--..+...++.++| |+|+++-.
T Consensus 54 ~i~~vveDd~v~tD~lee~i~~~ed~VqSvdI~~ 87 (91)
T 1b64_A 54 QIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAA 87 (91)
T ss_dssp EEEEEECTTSSCHHHHHHHHTTCTTTEEEEEESC
T ss_pred EEEEEEECCccChHHHHHHHHhccCceeEEEEEE
Confidence 33344554 3667888899999999 99999865
No 78
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=28.46 E-value=99 Score=18.52 Aligned_cols=31 Identities=13% Similarity=0.159 Sum_probs=22.8
Q ss_pred EEEEeec-hhhHHHHHHHhccCCC-ceEEEecC
Q 048525 6 IKVQVRC-DKCRSKAMETAADTDG-VISVSLQG 36 (86)
Q Consensus 6 lkV~m~C-~~C~~kv~k~l~~~~G-V~sV~vd~ 36 (86)
+.+-|.. .+--..+...++.++| |+|+++-.
T Consensus 58 i~~vveDd~~~tD~lee~i~~~ed~VqSvdI~~ 90 (94)
T 1f60_B 58 INCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAA 90 (94)
T ss_dssp EEEEEETTTCCHHHHHHHHHTCTTTEEEEEEEE
T ss_pred EEEEEECCccChHHHHHHHHhccCceeEEEEEE
Confidence 3333444 3667788889999999 99999864
No 79
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=27.35 E-value=53 Score=18.09 Aligned_cols=19 Identities=26% Similarity=0.188 Sum_probs=15.9
Q ss_pred HHHHHhccCCCceEEEecC
Q 048525 18 KAMETAADTDGVISVSLQG 36 (86)
Q Consensus 18 kv~k~l~~~~GV~sV~vd~ 36 (86)
...+.|.+.|+|.+|+-|.
T Consensus 53 ~~~~~L~~~p~V~~Ve~D~ 71 (80)
T 3cnq_P 53 KAVEELKKDPSVAYVEEDK 71 (80)
T ss_dssp HHHHHHHTCTTEEEEEECC
T ss_pred HHHHHHHhCCCccEEEeCc
Confidence 3467889999999999885
No 80
>3hrg_A Uncharacterized protein BT_3980 with actin-like A fold; NP_812891.1, bacteroides thetaiotaomicron BT_3980; HET: MSE UNL; 1.85A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.25 E-value=95 Score=21.39 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=30.0
Q ss_pred EecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEe
Q 048525 33 SLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 33 ~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s 69 (86)
.+|. +...+.+.|+..+-..+.+.|++..+++.++.
T Consensus 208 ~ld~-e~~~l~l~G~i~~~~~l~~~L~~Yi~~v~~~~ 243 (257)
T 3hrg_A 208 EFNQ-ERDELHLTGTLSDKETLMNELKKFILQVFIMN 243 (257)
T ss_dssp TCCT-TTCEEEEEECCTTHHHHHHHHHHHCSCEEECS
T ss_pred CCCc-cccEEEEEecCCCcHHHHHHHHHHHhhEEEeC
Confidence 4677 88999999994456788899999999999885
No 81
>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B
Probab=27.21 E-value=53 Score=17.86 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=18.5
Q ss_pred hccCCCceEEEecCCccceEEEecc
Q 048525 23 AADTDGVISVSLQGKYKDTVVVTGD 47 (86)
Q Consensus 23 l~~~~GV~sV~vd~~~~~~vtV~G~ 47 (86)
|..++||+.|++-. .++.+-+...
T Consensus 7 lk~v~gI~rVti~K-~~~~lf~i~~ 30 (54)
T 3mcb_A 7 LRQVTGVTRVTIRK-SKNILFVITK 30 (54)
T ss_dssp CEECTTEEEEEEES-SSSEEEEESS
T ss_pred CEECCCEEEEEEEe-CCCEEEEECC
Confidence 45689999999987 7777766554
No 82
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=26.63 E-value=51 Score=23.04 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=20.7
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
.+-.+.|.|+ +|+..+.+.+++.+.
T Consensus 181 ~n~~l~v~Gd-~~~~~~~~~i~~~f~ 205 (406)
T 3eoq_A 181 KNMVLAATGR-VDFDRLLAEAERLTE 205 (406)
T ss_dssp GGEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred cCEEEEEEcC-CCHHHHHHHHHHHhc
Confidence 3456888999 999999999998653
No 83
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=26.53 E-value=43 Score=19.81 Aligned_cols=17 Identities=6% Similarity=-0.070 Sum_probs=14.0
Q ss_pred HHHHHHHhccCCCceEE
Q 048525 16 RSKAMETAADTDGVISV 32 (86)
Q Consensus 16 ~~kv~k~l~~~~GV~sV 32 (86)
..+|..+|.+++||.+|
T Consensus 12 ~~~I~~~l~~~~gV~~v 28 (107)
T 2zzt_A 12 YDDIFAVLERFPNVHNP 28 (107)
T ss_dssp HHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHcCCCcccc
Confidence 46788999999998875
No 84
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=26.28 E-value=48 Score=18.89 Aligned_cols=18 Identities=11% Similarity=0.102 Sum_probs=15.4
Q ss_pred CCCHHHHHHHHHhhcCce
Q 048525 48 GVDSASLAKRLGKKLGHA 65 (86)
Q Consensus 48 ~vDp~~l~~~l~kk~~~a 65 (86)
++|++.|++.|...|+.+
T Consensus 60 gid~d~l~~~L~~~g~~~ 77 (81)
T 2fi0_A 60 GTPMDKIVRTLEANGYEV 77 (81)
T ss_dssp TCCHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHcCCEe
Confidence 389999999999988754
No 85
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=25.60 E-value=1.5e+02 Score=19.75 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=33.0
Q ss_pred CceEEEecCCccceEEEeccCCC-----HHHHHHHHHhhcCceeEEe
Q 048525 28 GVISVSLQGKYKDTVVVTGDGVD-----SASLAKRLGKKLGHASLET 69 (86)
Q Consensus 28 GV~sV~vd~~~~~~vtV~G~~vD-----p~~l~~~l~kk~~~aei~s 69 (86)
|..++.++. .-.+|.|.|.|+- +.++.+.|.+.+=+...++
T Consensus 105 ~~~~v~~~~-~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 105 GFSQLLYDD-HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp CCSEEEEEC-CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ceeeEEEec-CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 677899988 8889999999864 5688888888777777776
No 86
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=25.50 E-value=1.4e+02 Score=19.28 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=30.1
Q ss_pred CceEEEecCCccceEEEeccCC-C----HHHHHHHHHhhcCceeEEe
Q 048525 28 GVISVSLQGKYKDTVVVTGDGV-D----SASLAKRLGKKLGHASLET 69 (86)
Q Consensus 28 GV~sV~vd~~~~~~vtV~G~~v-D----p~~l~~~l~kk~~~aei~s 69 (86)
|..+|+++. .-.+|.|.|.++ + ...+.+.|.+.+-+...++
T Consensus 86 ~~~~v~~~~-~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 86 GFSQLLYDD-HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CCSEEEEES-CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CcceEEEeC-CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 678888887 788999999877 3 4566777776665665554
No 87
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=25.34 E-value=2.1e+02 Score=21.36 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=40.3
Q ss_pred hHHHHHHHhccCCCceEEEecCCccceEEEeccCCC-----HHHHHHHHHhhcCceeEEecc
Q 048525 15 CRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVD-----SASLAKRLGKKLGHASLETVE 71 (86)
Q Consensus 15 C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vD-----p~~l~~~l~kk~~~aei~s~~ 71 (86)
....+.+.+...-+..+|+++. .-..|+|+|.++- ...+.+.|.+.+-+...++.+
T Consensus 351 ~~~~~~~el~~~~~~~~v~v~~-~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqg 411 (446)
T 3tvi_A 351 KCDKIIEEIKKQCNPDSIEIHP-NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQG 411 (446)
T ss_dssp THHHHHHHHHHHSCCSEEEEEE-EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCcEEEeC-CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEec
Confidence 4455666665544677888887 7889999998763 567788888766677777744
No 88
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=24.88 E-value=73 Score=21.87 Aligned_cols=60 Identities=10% Similarity=0.102 Sum_probs=39.0
Q ss_pred EEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEe
Q 048525 4 IVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLET 69 (86)
Q Consensus 4 vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s 69 (86)
|+--+. -.|..|+++|..-|..-+.|+= +|- ..++-=. + -+-.+=+..|...|-...|.+
T Consensus 102 vTwy~SWSPC~~CA~~v~~FL~~~~~v~L-~If---~aRLY~~-~-~~~~~gLr~L~~aG~~v~iM~ 162 (203)
T 3v4k_A 102 VTCFTSWSPCFSCAQEMAKFISKNKHVSL-CIK---TARIYDD-Q-GRCQEGLRTLAEAGAKISIMT 162 (203)
T ss_pred EEEEEeCCChHHHHHHHHHHHhhCCCeEE-EEE---EEeeccc-C-chHHHHHHHHHHCCCeEEecC
Confidence 444455 4499999999999999988753 232 2333323 3 355667777777766666654
No 89
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=24.81 E-value=63 Score=22.47 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=20.8
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
.+-.+.|.|+ +|+..+.+.+++.+.
T Consensus 188 ~~~~l~v~Gd-~~~~~~~~~~~~~f~ 212 (424)
T 3amj_B 188 RTAVVTLVGD-ITRAEAETIAQQLTA 212 (424)
T ss_dssp TSCEEEEEES-CCHHHHHHHHHHTTT
T ss_pred CceEEEEEeC-CCHHHHHHHHHHHHh
Confidence 4556899999 999999999988654
No 90
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=24.23 E-value=71 Score=18.90 Aligned_cols=33 Identities=21% Similarity=0.475 Sum_probs=20.8
Q ss_pred EEEEEEEeechhhHHHHH-------HHh-ccCCCceEEEec
Q 048525 3 KIVIKVQVRCDKCRSKAM-------ETA-ADTDGVISVSLQ 35 (86)
Q Consensus 3 ~vvlkV~m~C~~C~~kv~-------k~l-~~~~GV~sV~vd 35 (86)
.+.+++.=.|.+|.++.. +.| ..+|.|..|..-
T Consensus 39 ~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev~~V~~v 79 (88)
T 1xhj_A 39 IVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQV 79 (88)
T ss_dssp EEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred EEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCceEEEec
Confidence 345666666999987653 233 367888776543
No 91
>2pb9_A Phosphomethylpyrimidine kinase; phosphate, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.70A {Pyrococcus furiosus} SCOP: c.74.1.2
Probab=24.19 E-value=1.5e+02 Score=20.03 Aligned_cols=42 Identities=5% Similarity=0.029 Sum_probs=33.1
Q ss_pred HHHHhccCCCceEEEecCCccc---eEEEeccCCCHHHHHHHHHhhc
Q 048525 19 AMETAADTDGVISVSLQGKYKD---TVVVTGDGVDSASLAKRLGKKL 62 (86)
Q Consensus 19 v~k~l~~~~GV~sV~vd~~~~~---~vtV~G~~vDp~~l~~~l~kk~ 62 (86)
+..++..+.|+-.|-+|.-.-+ .+.|-|. ||.+++++++...
T Consensus 143 i~~a~~~~~~~PdvIyd~G~~GkEP~i~vfG~--dp~ev~~kv~~l~ 187 (195)
T 2pb9_A 143 IETAIKRIKERPDIIYHLGDVGKEPMILVFGR--NPREVLEKIKMLI 187 (195)
T ss_dssp HHHHHHHSSSCEEEEEECCBTTBCCEEEEEES--SHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCCeEEEeCCCCCCCcEEEEECC--CHHHHHHHHHHHH
Confidence 6677888888999999863333 4779997 9999999998753
No 92
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=23.57 E-value=17 Score=25.90 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=5.1
Q ss_pred eechhhHHHHH-----HHhccCC
Q 048525 10 VRCDKCRSKAM-----ETAADTD 27 (86)
Q Consensus 10 m~C~~C~~kv~-----k~l~~~~ 27 (86)
|+|.||..|+- ++|.++.
T Consensus 17 ~~~~GCg~K~~~~~L~~~l~~l~ 39 (345)
T 2zod_A 17 VRSSGCAAKVGPGDLQEILKGFN 39 (345)
T ss_dssp CC----------CCCCHHHHHSC
T ss_pred hccCCcccccCHHHHHHHHHhcC
Confidence 89999999984 4555544
No 93
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=23.50 E-value=61 Score=22.77 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=20.3
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
.+-.+.|.|+ +|+..+.+.+.+.+.
T Consensus 187 ~n~~l~v~Gd-~~~~~~~~~i~~~f~ 211 (443)
T 1hr6_B 187 DRMVLAGAGA-VDHEKLVQYAQKYFG 211 (443)
T ss_dssp GGEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred CCEEEEEEcC-CCHHHHHHHHHHHhc
Confidence 3446888999 999999999988654
No 94
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=23.01 E-value=86 Score=23.71 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=30.4
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcCceeEEeccC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLGHASLETVEE 72 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~~p 72 (86)
...+|.|+|.|.-..+++..|.+.+.++.++.-.|
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 45689999999999999999999999999887655
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=22.70 E-value=81 Score=23.84 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=30.3
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcCceeEEeccC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLGHASLETVEE 72 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~~p 72 (86)
...+|.|+|.|.-..+++..|.+.+.++.++.-.|
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 45679999999999999999999888999887655
No 96
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=22.60 E-value=33 Score=19.70 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=17.4
Q ss_pred ccCCCce--EEEecCCccceEEEecc
Q 048525 24 ADTDGVI--SVSLQGKYKDTVVVTGD 47 (86)
Q Consensus 24 ~~~~GV~--sV~vd~~~~~~vtV~G~ 47 (86)
..+||+. .|.+.. ..+.|+|.|.
T Consensus 12 ~dlPG~~~edi~V~v-~~~~L~I~g~ 36 (90)
T 2y1y_A 12 LDVKHFSPEELKVKV-LGDVIEVHGK 36 (90)
T ss_dssp EECTTSCGGGEEEEE-ETTEEEEEEE
T ss_pred EECCCCcHHHeEEEE-ECCEEEEEEE
Confidence 3577874 477777 7789999997
No 97
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=22.59 E-value=1.4e+02 Score=18.34 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=27.5
Q ss_pred CeEEEEEEEeechhhHHHHHH--------HhccCCCceEEEecC
Q 048525 1 MQKIVIKVQVRCDKCRSKAME--------TAADTDGVISVSLQG 36 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~~kv~k--------~l~~~~GV~sV~vd~ 36 (86)
|.+|+.++.+.-+.=...-.+ +..+++||.|..+-.
T Consensus 1 m~~iv~~i~L~~g~d~~aFe~w~~evD~P~~~~LpsVrsF~V~R 44 (105)
T 2jdj_A 1 METIIHKIRLFDVAQADAFEFWVQNVDYATCPDLPSVVRFDVHR 44 (105)
T ss_dssp CEEEEEEEEESCGGGHHHHHHHHHHTHHHHGGGCTTEEEEEEEE
T ss_pred CcEEEEEEecCCCCCHHHHHHHHHhchhhhccCCCcceeEEEEe
Confidence 788999999887775555443 456999999998854
No 98
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=22.58 E-value=24 Score=21.49 Aligned_cols=23 Identities=13% Similarity=0.292 Sum_probs=17.7
Q ss_pred ccCCCc--eEEEecCCcc-ceEEEecc
Q 048525 24 ADTDGV--ISVSLQGKYK-DTVVVTGD 47 (86)
Q Consensus 24 ~~~~GV--~sV~vd~~~~-~~vtV~G~ 47 (86)
..+||+ +.|++.. .. +.|+|.|.
T Consensus 40 ~~lPG~~~edi~V~v-~~~~~L~I~g~ 65 (123)
T 3aab_A 40 ADLAGFNKEKIKARV-SGQNELIIEAE 65 (123)
T ss_dssp EECCSCCGGGCEEEE-ETTTEEEEEEE
T ss_pred EECCCCCHHHEEEEE-eCCCEEEEEEE
Confidence 368887 4477777 66 89999998
No 99
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A*
Probab=22.16 E-value=1.7e+02 Score=22.09 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=38.9
Q ss_pred HHHHHHHhccCCCceEEEecCCccceEEEeccCCCHHHHHHHHHhhcCceeEEec
Q 048525 16 RSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDSASLAKRLGKKLGHASLETV 70 (86)
Q Consensus 16 ~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~ 70 (86)
...+...+...++|.=.-++ ..+.++|.|+.-....+...|+..+..+..+.+
T Consensus 281 ~~~v~~~~~~~~~v~iA~~N--sP~~~ViSG~~~ai~~~~~~l~~~g~~~~~L~V 333 (491)
T 3tzy_A 281 ADEIREVFSDFPDLEVCVYA--APTQTVIGGPPEQVDAILARAEAEGKFARKFAT 333 (491)
T ss_dssp HHHHHHHGGGCTTCEEEEEE--ETTEEEEEECHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHhhhcccccceeeeec--CCCcEEeCCcHHHHHHHHHHHHhcCceEEeccc
Confidence 45566777777887666666 578899999954667788888887777777654
No 100
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=21.95 E-value=1.2e+02 Score=18.58 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=21.3
Q ss_pred CeEEEEEEEeechhhHHHHHHHhccC----CCceEEEecC
Q 048525 1 MQKIVIKVQVRCDKCRSKAMETAADT----DGVISVSLQG 36 (86)
Q Consensus 1 m~~vvlkV~m~C~~C~~kv~k~l~~~----~GV~sV~vd~ 36 (86)
|..|+|-..-.|.-|. ++++.|... .-.+.+++|.
T Consensus 13 ~~~Vvvysk~~Cp~C~-~ak~lL~~~~~~~v~~~~idid~ 51 (127)
T 3l4n_A 13 LSPIIIFSKSTCSYSK-GMKELLENEYQFIPNYYIIELDK 51 (127)
T ss_dssp SCSEEEEECTTCHHHH-HHHHHHHHHEEEESCCEEEEGGG
T ss_pred cCCEEEEEcCCCccHH-HHHHHHHHhcccCCCcEEEEecC
Confidence 4557777667799996 456666653 1234555553
No 101
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=21.74 E-value=71 Score=22.60 Aligned_cols=25 Identities=12% Similarity=0.200 Sum_probs=20.3
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLG 63 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~ 63 (86)
.+-.+.|.|+ +|+..+.+.+++.+.
T Consensus 193 ~n~~l~v~Gd-~~~~~~~~~i~~~f~ 217 (446)
T 1pp9_A 193 PRMVLAAAGG-LEHRQLLDLAQKHFS 217 (446)
T ss_dssp GGEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred CCEEEEEEcC-CCHHHHHHHHHHHhc
Confidence 3446888999 999999999987654
No 102
>3g74_A Protein of unknown function; APC21008.1, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; 2.43A {Eubacterium ventriosum atcc 27560}
Probab=21.37 E-value=73 Score=19.20 Aligned_cols=26 Identities=8% Similarity=0.230 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHhhcCceeEEeccCCC
Q 048525 49 VDSASLAKRLGKKLGHASLETVEEMK 74 (86)
Q Consensus 49 vDp~~l~~~l~kk~~~aei~s~~p~~ 74 (86)
+|..++++.|++.+.++++-.+++..
T Consensus 60 isvm~II~~I~~~~P~l~I~~iGe~~ 85 (100)
T 3g74_A 60 VSIMKIIEMADQTFQNVDIQNIGETE 85 (100)
T ss_dssp EEHHHHHHHHHHHCSSEEEEECSCSE
T ss_pred EEHHHHHHHHHHHCCCceEEEcCCCc
Confidence 68899999999999999999888765
No 103
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=21.32 E-value=27 Score=20.24 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=17.6
Q ss_pred ccCCCce--EEEecCCccceEEEecc
Q 048525 24 ADTDGVI--SVSLQGKYKDTVVVTGD 47 (86)
Q Consensus 24 ~~~~GV~--sV~vd~~~~~~vtV~G~ 47 (86)
..+||+. .|++.. ..+.|+|.|.
T Consensus 20 ~~lPG~~~edi~v~~-~~~~L~I~g~ 44 (100)
T 3gla_A 20 ADLPGIDPSQIEVQM-DKGILSIRGE 44 (100)
T ss_dssp EECTTSCGGGCEEEE-ETTEEEEEEE
T ss_pred EECCCCCHHHEEEEE-ECCEEEEEEE
Confidence 3577864 477777 7889999997
No 104
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=20.37 E-value=94 Score=23.45 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=30.6
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhcCceeEEeccCC
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKLGHASLETVEEM 73 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~~~aei~s~~p~ 73 (86)
...+|.|+|.|.-..+++..|.+.+.++.++.-.|.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456899999999999999999998889998876553
No 105
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=20.19 E-value=1.6e+02 Score=18.05 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=19.0
Q ss_pred ccceEEEeccCCCHHHHHHHHHhhc
Q 048525 38 YKDTVVVTGDGVDSASLAKRLGKKL 62 (86)
Q Consensus 38 ~~~~vtV~G~~vDp~~l~~~l~kk~ 62 (86)
..+..||.|-+..|..+++.+-+..
T Consensus 94 ~~gt~TvlaigP~~~~~vd~itg~L 118 (121)
T 1wn2_A 94 PPGTVTVLAVGPAPEEIVDKVTGNL 118 (121)
T ss_dssp CTTCEEEEEEEEEEHHHHHHHHTTS
T ss_pred CCCCEEEEEeccCCHHHHHHhcCCC
Confidence 4677888887778888888876643
No 106
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=20.12 E-value=1e+02 Score=20.86 Aligned_cols=59 Identities=10% Similarity=0.065 Sum_probs=36.1
Q ss_pred EEEEEE-eechhhHHHHHHHhccCCCceEEEecCCccceEEEeccCCCH--HHHHHHHHhhcCceeEEe
Q 048525 4 IVIKVQ-VRCDKCRSKAMETAADTDGVISVSLQGKYKDTVVVTGDGVDS--ASLAKRLGKKLGHASLET 69 (86)
Q Consensus 4 vvlkV~-m~C~~C~~kv~k~l~~~~GV~sV~vd~~~~~~vtV~G~~vDp--~~l~~~l~kk~~~aei~s 69 (86)
|+--+. -.|..|+.+|...|.+-+.|+ .+|-. .++- -. -+| ..=+..|...|-...|.+
T Consensus 88 VTwy~SwSPC~~CA~~va~FL~~~~~v~-L~If~---aRLY--~~-~~~~~q~gLr~L~~~G~~v~iM~ 149 (190)
T 3vow_A 88 VTWYTSWSPCPDCAGEVAEFLARHSNVN-LTIFT---ARLY--YF-QYPCYQEGLRSLSQEGVAVEIMD 149 (190)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHCTTEE-EEEEE---EECT--TT-TSHHHHHHHHHHHHHTCEEEECC
T ss_pred EEEEEeCCchHHHHHHHHHHHHhCCCeE-EEEEE---Eecc--cc-cCchHHHHHHHHHHCCCcEEEeC
Confidence 445555 449999999999999988864 22221 1111 11 133 455677777776666654
Done!