BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048530
LYSSTSVPGSDVDLLEFPLNLEYLEAEFFLFGSLGYGLDRVAPNLTLGGPAPIGAKKANL
DPFTNDVVLQFAWQEVGHLRAIKKTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPFDPY
ANSINYLIASYLVPYVGLTGYVGANPKLQGAVSKRLVAGLLGVESGQDAVIRALLYEKAN
EKVYPYGIPVAVFTNKISQLRNTLGHAGIKDEGLVVPKALGAEGKIRGNVLAGDENSVAY
DRTPEEILRIVYGSGDERVPGGFFPKGGDGQIARSHLHKA

High Scoring Gene Products

Symbol, full name Information P value
AT1G47980 protein from Arabidopsis thaliana 2.1e-109
AT3G62730 protein from Arabidopsis thaliana 1.7e-82

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048530
        (280 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2202593 - symbol:AT1G47980 "AT1G47980" species...  1081  2.1e-109  1
TAIR|locus:2081645 - symbol:AT3G62730 "AT3G62730" species...   827  1.7e-82   1


>TAIR|locus:2202593 [details] [associations]
            symbol:AT1G47980 "AT1G47980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 IPI:IPI00520655
            RefSeq:NP_564518.1 UniGene:At.17708 ProteinModelPortal:F4HWR0
            PRIDE:F4HWR0 DNASU:841216 EnsemblPlants:AT1G47980.1 GeneID:841216
            KEGG:ath:AT1G47980 OMA:KGGFFPN Uniprot:F4HWR0
        Length = 315

 Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
 Identities = 205/275 (74%), Positives = 238/275 (86%)

Query:     3 SSTSVPGSDVDLLEFPLNLEYLEAEFFLFGSLGYGLDRVAPNLTLGGPAPIGAKKANLDP 62
             ++T+    D  LLEFPLNLEYLEAEFFLFG+LG GLD+VAPNLT+GGP+PIGA+KANLDP
Sbjct:    35 ATTNCTDQDRKLLEFPLNLEYLEAEFFLFGALGLGLDKVAPNLTMGGPSPIGAQKANLDP 94

Query:    63 FTNDVVLQFAWQEVGHLRAIKKTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPFDPYAN 122
              T D++LQFAWQEVGHLRAIKKTVKGF RP LDLS  +FAKV+DKAFG    PPF+PYAN
Sbjct:    95 LTRDIILQFAWQEVGHLRAIKKTVKGFARPQLDLSKKAFAKVMDKAFGVKFVPPFNPYAN 154

Query:   123 SINYLIASYLVPYVGLTGYVGANPKLQGAVSKRLVAGLLGVESGQDAVIRALLYEKANEK 182
             S NYLIASYLVPYVGLTGYVGANPKLQ   S++LVAGLLGVESGQDAVIR +LY +A   
Sbjct:   155 SYNYLIASYLVPYVGLTGYVGANPKLQCPASRKLVAGLLGVESGQDAVIRGMLYARAAHI 214

Query:   183 VYPYGIPVAVFTNKISQLRNTLGHAGIKDEGLVVPKALGAEGKIRGNVLAGDENSVAYDR 242
             VYPYG+ VA FT+KIS LRN LG AG+KDEGL+VPK +GAEG++ GNVL G+E S+++DR
Sbjct:   215 VYPYGVTVAAFTDKISDLRNKLGKAGVKDEGLIVPKFMGAEGQVIGNVLVGNELSLSFDR 274

Query:   243 TPEEILRIVYGSGDERVPGGFFPKGGDGQIARSHL 277
             TPEEILRIVYGSG+E VPGGF+PKG DG+IA+S+L
Sbjct:   275 TPEEILRIVYGSGNESVPGGFYPKGADGEIAKSYL 309


>TAIR|locus:2081645 [details] [associations]
            symbol:AT3G62730 "AT3G62730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL162651 EMBL:AF410333 EMBL:AY093727
            IPI:IPI00540350 PIR:T48062 RefSeq:NP_191832.1 UniGene:At.4830
            ProteinModelPortal:Q9LZJ2 PaxDb:Q9LZJ2 PRIDE:Q9LZJ2 ProMEX:Q9LZJ2
            EnsemblPlants:AT3G62730.1 GeneID:825448 KEGG:ath:AT3G62730
            TAIR:At3g62730 eggNOG:NOG278989 HOGENOM:HOG000240047
            InParanoid:Q9LZJ2 OMA:LAKGGPP PhylomeDB:Q9LZJ2
            ProtClustDB:CLSN2684160 Genevestigator:Q9LZJ2 Uniprot:Q9LZJ2
        Length = 317

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 164/275 (59%), Positives = 201/275 (73%)

Query:     4 STSVPGSDVDLLEFPLNLEYLEAEFFLFGSLGYGLDRVAPNLTLGGPAPIGAKKANLDPF 63
             S ++  SDVD + F +NLE+ EAEFFL G+ G GLD     L  GGP PIGAKKANLDP 
Sbjct:    27 SGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGLDAYNATLAKGGPPPIGAKKANLDPI 86

Query:    64 TNDVVLQFAWQEVGHLRAIKKTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPFDPYANS 123
             TN ++ +F +QE+GHLRAI     G PRPL++L+  +FA  +D+A G+  NP FDPYANS
Sbjct:    87 TNRIIEEFGYQEIGHLRAITDMTGGIPRPLINLTRENFAVFMDRAVGRKSNPRFDPYANS 146

Query:   124 INYLIASYLVPYVGLTGYVGANPKLQGAVSKRLVAGLLGVESGQDAVIRALLYEKANEKV 183
             +NYL+ASY +PYVGLTGYVG  P L     K+LVAGLLGVESGQDAVIR LLYE+ NEKV
Sbjct:   147 LNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKLVAGLLGVESGQDAVIRTLLYERQNEKV 206

Query:   184 YPYG-IPVAVFTNKISQLRNTLGHAGIKDEGLVVPKALGAEGKIRGNVLAGDENSVAYDR 242
               YG + VA  TN+IS LRN LG  GIKDEGL VP  LGAE +   N+L+ D  S++YDR
Sbjct:   207 EEYGGVTVAELTNEISNLRNELGMCGIKDEGLCVPLWLGAENRTTSNILSADPYSLSYDR 266

Query:   243 TPEEILRIVYGSGDERVPGGFFPKGGDGQIARSHL 277
             T +EILR++YG+GDE  PGGF+P G +G+IAR  L
Sbjct:   267 TAQEILRVMYGTGDEHRPGGFWPCGANGRIARMFL 301


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.140   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      280       280   0.00082  115 3  11 22  0.40    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  560 (60 KB)
  Total size of DFA:  172 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.55u 0.16s 22.71t   Elapsed:  00:00:01
  Total cpu time:  22.55u 0.16s 22.71t   Elapsed:  00:00:01
  Start:  Sat May 11 06:03:56 2013   End:  Sat May 11 06:03:57 2013

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