BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048530
         (280 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P22242|DRPE_CRAPL Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum
           PE=2 SV=1
          Length = 313

 Score =  357 bits (915), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 173/270 (64%), Positives = 206/270 (76%)

Query: 2   YSSTSVPGSDVDLLEFPLNLEYLEAEFFLFGSLGYGLDRVAPNLTLGGPAPIGAKKANLD 61
           +    +P SDV LLEFPLNLE LEAEFF + + G G+D + P L  GGP+PIG +KANL 
Sbjct: 30  HEKDDIPKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLS 89

Query: 62  PFTNDVVLQFAWQEVGHLRAIKKTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPFDPYA 121
           PF  D++ QFA+QE GH+RAI+ +V+GFPRPLLDLSA SFA V+D AFGK L PPFDPYA
Sbjct: 90  PFIRDIIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYA 149

Query: 122 NSINYLIASYLVPYVGLTGYVGANPKLQGAVSKRLVAGLLGVESGQDAVIRALLYEKANE 181
           N INYL+A Y+VPYVGLTGYVGANPKL+  VS++LVAGLL VE+GQDA+IRALLYE+A +
Sbjct: 150 NDINYLLACYVVPYVGLTGYVGANPKLESPVSRKLVAGLLAVEAGQDAIIRALLYERATD 209

Query: 182 KVYPYGIPVAVFTNKISQLRNTLGHAGIKDEGLVVPKALGAEGKIRGNVLAGDENSVAYD 241
           KV PYGI VA FTNKIS+LRN LG  G+KD GL+V   LGAEGKI GNVLAGD+NS+A+ 
Sbjct: 210 KVEPYGITVAEFTNKISELRNKLGDKGVKDLGLIVEPELGAEGKISGNVLAGDKNSLAFP 269

Query: 242 RTPEEILRIVYGSGDERVPGGFFPKGGDGQ 271
           RTPE  L     +     P  F PK   G+
Sbjct: 270 RTPERCLGSCTAAAMRPSPAAFIPKAPTGK 299


>sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2
          Length = 3256

 Score = 32.7 bits (73), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 185  PYGIPVAVFTNKISQLRNTLGHAGIKDEGLVVPKALGAEGKIRGN--VLAGDENSV-AYD 241
            P   PV   T+   +L+ +LG  G+K+E L V K     GK        AGD  S+ A+ 
Sbjct: 1984 PQPDPVKTPTSSKQRLKISLGKVGVKEEVLPVGKLTQTSGKTTQTHRETAGDGKSIKAFK 2043

Query: 242  RTPEEILRIV-YGSGDERVP 260
             + +++L    YG+G ER P
Sbjct: 2044 ESAKQMLDPANYGTGMERWP 2063


>sp|Q06004|DHSO_BACSU Sorbitol dehydrogenase OS=Bacillus subtilis (strain 168) GN=gutB
           PE=1 SV=3
          Length = 353

 Score = 32.0 bits (71), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 52/134 (38%), Gaps = 23/134 (17%)

Query: 60  LDPFTNDVVLQFAWQEVGHLRAIKKTVKGFPRPLLDLSAGSFAKV-IDKAFGKPLNPPFD 118
           +   TND  +  AW+  G+  A++  +    R       G  A V +      PLN PF 
Sbjct: 233 IKTITNDRGVDVAWETAGNPAALQSALASVRR------GGKLAIVGLPSQNEIPLNVPF- 285

Query: 119 PYANSINYLIASYLVPYVGLTGYVGANPK-----LQGAV-SKRLVAGLLGVESGQDAVIR 172
                    IA   +   G+  Y    PK       G V +K LV     +E  QDA+ R
Sbjct: 286 ---------IADNEIDIYGIFRYANTYPKGIEFLASGIVDTKHLVTDQYSLEQTQDAMER 336

Query: 173 ALLYEKANEKVYPY 186
           AL ++    KV  Y
Sbjct: 337 ALQFKNECLKVMVY 350


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.141    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,172,523
Number of Sequences: 539616
Number of extensions: 5463454
Number of successful extensions: 11418
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 11412
Number of HSP's gapped (non-prelim): 13
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)